Pregenerated sensors for CDRT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000241322Ensembl transcript IDs: ENST00000354433.7, ENST00000395667.7, ENST00000395906.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTaGTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGTAAAGCCATA | + |
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Preference number: 1 (lower is better) Translates to: SAFSLTGPLPPLGSH*FDCLCVQDCSGKAI Trigger: TATGGCTTTACCACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR TCA 90 bp | AGATTAGGAAACAAAAAGACGGCAGAAGGAGCCAAATCAGGACTGTaGAGTGGATGCCTAATGATTTCCCATCCAAATGCTCACAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: RLGNKKTAEGAKSGL*SGCLMISHPNAHKV Trigger: AACCTTGTGAGCATTTGGATGGGAAATCATTAGGCATCCACTTCACAGTCCTGATTTGGCTCCTTCTGCCGTCTTTTTGTTTCCTAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR GCA 90 bp | TCTGGAGTACAGCCTGACAGTACGTGTCAAAATCCCTACAACATGTaGATATCATCTGACTTAGCAGTTTCACATCTAGGAATTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: SGVQPDSTCQNPYNM*ISSDLAVSHLGIYL Trigger: AAGATAAATTCCTAGATGTGAAACTGCTAAGTCAGATGATATGCACATGTTGTAGGGATTTTGACACGTACTGTCAGGCTGTACTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 90 bp | TTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTaGAAAGTTAGCTCAACTTTAATTTTTCAATCAGAATTGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LSAANLSTMVLAPTE*KVSSTLIFQSELCE Trigger: CTCACACAATTCTGATTGAAAAATTAAAGTTGAGCTAACTTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 90 bp | ATTTTTCAATCAGAATTGTGTGAGCTAAACCAATTGAGACGTCTATaGTATTGGTTGTTGTTTCTACCGTTAACCATTGGTCCACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: IFQSELCELNQLRRL*YWLLFLPLTIGPLK Trigger: TTTAAGTGGACCAATGGTTAACGGTAGAAACAACAACCAATACCATAGACGTCTCAATTGGTTTAGCTCACACAATTCTGATTGAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTGTCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCGTTGAAAATTTCCATTaGAAGCCCTGCTCTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DLSAFSLTGPLPPLGSHCVENFH*KPCSCL Trigger: CAGACAAGAGCAGGGCTTTCAATGGAAATTTTCAAC...GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACTGTCACAGGCACCTTaGCAGCAACATATCCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: PLKALLLSAANLSTMVLALSQAP*QQHIPY Trigger: ATAAGGGATATGTTGCTGTCAAGGTGCCTGTGACAG...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 90 bp | AAAACTATGGCCATGAGCTTTGCTCTTGATCTGTCCGCTTTTTCTTaGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGT | + |
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Preference number: 2 (lower is better) Translates to: KTMAMSFALDLSAFS*TGPLPPLGSHCFDC Trigger: ACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATCAAGAGCAAAGCTCATGGCCATAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTAGCCCTGCTCTTGTCTaGAGCCAATCTGAGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLSPALV*SQSEYN Trigger: ATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCT...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTGGAAACCTCACAAATTGATGTaGATGGTTTGCAGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLSAANLSTMVLAPTEWKPHKLM*MVCSCG Trigger: TCCACAGCTGCAAACCATCCACATCAATTTGTGAGG...TTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATGGGACAGAACCTATATaGATCCAGAACACTCTAATC | + |
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Preference number: 2 (lower is better) Translates to: TLCRRHCLSQSSTLGGKDGTEPI*IQNTLI Trigger: GATTAGAGTGTTCTGGATTCATATAGGTTCTGTCCC...ATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354433.7 ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGTCAGAAGTGGAATTATaGCTTCTGCTAGGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SHLLVATALIVFVFRIVVSEVEL*LLLGEG Trigger: GCCTTCTCCTAGCAGAAGCCATAATTCCACTTCTGA...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTGATGGTTTGCAGCTGTaGACTTTAATCTTCAACATC | + |
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Preference number: 2 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLDGLQL*TLIFNI Trigger: GATGTTGAAGATTAAAGTCCACAGCTGCAAACCATC...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGGCAGGAGCATTGTTGTaGTGGAGAAGAACTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVAGALL*WRRTLW Trigger: CCAGAGAGTTCTTCTCCACCACAACAATGCTCCTGC...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 90 bp | TTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTaGGCACCCACTGAGTGGAAAGTTAGCTCAACTTTAATTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LKALLLSAANLSTMV*APTEWKVSSTLIFQ Trigger: TTGAAAAATTAAAGTTGAGCTAACTTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGGGGACAGAACCTATATaGATCCAGAACACTCTAATC | + |
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Preference number: 2 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVGTEPI*IQNTLI Trigger: GATTAGAGTGTTCTGGATTCATATAGGTTCTGTCCC...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGCATGAGCTTTGCTCTTaGTCTGTCCGCTTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVHELCS*SVRFFF Trigger: AAAGAAAAAGCGGACAGATCAAGAGCAAAGCTCATG...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGATCAGGACTGTGAAGTaGATGCCTAATGATTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVIRTVK*MPNDFP Trigger: TGGGAAATCATTAGGCATCCACTTCACAGTCCTGAT...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGTGTTCTTTAGCCTTCTaGAAAGGAATCAAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVCSLAF*KGIKQN Trigger: ATTTTGCTTGATTCCTTTCCAGAAGGCTAAAGAACA...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CAA 90 bp | GATCTGTCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCATTGATGTGGATGGTTaGCAGCTGTGGACTTTAATC | + |
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Preference number: 3 (lower is better) Translates to: DLSAFSLTGPLPPLGSHCIDVDG*QLWTLI Trigger: GATTAAAGTCCACAGCTGCAAACCATCCACATCAAT...GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACTTTTTCAAGTCCCCTaGTATACCTCCACCTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PLKALLLSAANLSTMVLALFQVP*YTSTLE Trigger: CTCTAAGGTGGAGGTATACAAGGGGACTTGAAAAAG...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR GCA 72 bp | TCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTaGTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SLTGPLPPLGSH*FDCLCVQDCSG Trigger: ACCACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR GCA 72 bp | GTGCTCTCATATAGTGCTGGTGGGAGTGTAAATTTGTaGAAACTCTCTGGAGTACAGCCTGACAGTACGTGT | + |
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Preference number: 3 (lower is better) Translates to: VLSYSAGGSVNL*KLSGVQPDSTC Trigger: ACACGTACTGTCAGGCTGTACTCCAGAGAGTTTGCACAAATTTACACTCCCACCAGCACTATATGAGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCAGAGACGTCTATGGTATaGGTTGTTGTTTCTACCGTT | + |
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Preference number: 3 (lower is better) Translates to: PLKALLLSAANLSTMVLAETSMV*VVVSTV Trigger: AACGGTAGAAACAACAACCAATACCATAGACGTCTC...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 72 bp | AAAGACGGCAGAAGGAGCCAAATCAGGACTGTGAAGTaGATGCCTAATGATTTCCCATCCAAATGCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: KDGRRSQIRTVK*MPNDFPSKCSQ Trigger: TTGTGAGCATTTGGATGGGAAATCATTAGGCATCCACTTCACAGTCCTGATTTGGCTCCTTCTGCCGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR TCA 72 bp | AACAAAAAGACGGCAGAAGGAGCCAAATCAGGACTGTaGAGTGGATGCCTAATGATTTCCCATCCAAATGCT | + |
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Preference number: 3 (lower is better) Translates to: NKKTAEGAKSGL*SGCLMISHPNA Trigger: AGCATTTGGATGGGAAATCATTAGGCATCCACTTCACAGTCCTGATTTGGCTCCTTCTGCCGTCTTTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR GCA 72 bp | TTGTTGAAAATTTCCATTGAAAGCCCTGCTCTTGTCTaGAGCCAATCTGAGTACAATGGTTTTGGCACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LLKISIESPALV*SQSEYNGFGTH Trigger: GTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGGAAATTTTCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTAAATGCCTCAGGATCTaGATCCCATTTGTTGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLKCLRI*IPFVEN Trigger: ATTTTCAACAAATGGGATCAAGATCCTGAGGCATTT...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR TCA 72 bp | AGTGGAATTATGGCTTCTGCTAGGAGAAGGCAGGCTTaGGTAACCTCCTTAGGTTTCTCAAGAAAGAATAAA | + |
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Preference number: 3 (lower is better) Translates to: SGIMASARRRQA*VTSLGFSRKNK Trigger: TTTATTCTTTCTTGAGAAACCTAAGGAGGTTACTCAAGCCTGCCTTCTCCTAGCAGAAGCCATAATTCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR TCA 72 bp | GTGCCATGTTGGGAAAATAGATGGTTCCAGGTCATATaGCGTATGAGGGAACTTCAAAAAGATTATGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: VPCWENRWFQVI*RMRELQKDYGK Trigger: TTTTCCATAATCTTTTTGAAGTTCCCTCATACGTCATATGACCTGGAACCATCTATTTTCCCAACATGGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 72 bp | TCAGAATTGTGTGAGCTAAACCAATTGAGACGTCTATaGTATTGGTTGTTGTTTCTACCGTTAACCATTGGT | + |
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Preference number: 3 (lower is better) Translates to: SELCELNQLRRL*YWLLFLPLTIG Trigger: ACCAATGGTTAACGGTAGAAACAACAACCAATACCATAGACGTCTCAATTGGTTTAGCTCACACAATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 72 bp | GCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTaGAAAGTTAGCTCAACTTTAATTTTTCAATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: ANLSTMVLAPTE*KVSSTLIFQSE Trigger: TTCTGATTGAAAAATTAAAGTTGAGCTAACTTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 72 bp | TGTGCACTGCTTTTTAGCCATCTAAAGTTTCCTTTCTaGGTATATAGGAGATGTAACAACACAGAGGTATCT | + |
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Preference number: 3 (lower is better) Translates to: CALLFSHLKFPF*VYRRCNNTEVS Trigger: AGATACCTCTGTGTTGTTACATCTCCTATATACCCAGAAAGGAAACTTTAGATGGCTAAAAAGCAGTGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR TCA 72 bp | TACGTGTCAAAATCCCTACAACATGTGCATATCATCTaGCTTAGCAGTTTCACATCTAGGAATTTATCTTCG | + |
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Preference number: 3 (lower is better) Translates to: YVSKSLQHVHII*LSSFTSRNLSS Trigger: CGAAGATAAATTCCTAGATGTGAAACTGCTAAGTCAGATGATATGCACATGTTGTAGGGATTTTGACACGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CCA 72 bp | CTCATAATAAGTAGATGTTATTGTTCTTTAGCCTTCTaGAAAGGAATCAAGCAAAATGCCTTCAGCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: LIISRCYCSLAF*KGIKQNAFSIP Trigger: TGGGATGCTGAAGGCATTTTGCTTGATTCCTTTCCAGAAGGCTAAAGAACAATAACATCTACTTATTATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR GCA 72 bp | ATCTTTGTAATCTTTCATCTGGAAAATCATATTGTGTaGCATGTTGGGAAAATAGATGGTTCCAGGTCATAT | + |
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Preference number: 3 (lower is better) Translates to: IFVIFHLENHIV*HVGKIDGSRSY Trigger: ATATGACCTGGAACCATCTATTTTCCCAACATGGCACACAATATGATTTTCCAGATGAAAGATTACAAAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 72 bp | GCCATGAGCTTTGCTCTTGATCTGTCCGCTTTTTCTTaGACTGGACCACTCCCACCTCTTGGTAGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: AMSFALDLSAFS*TGPLPPLGSHC Trigger: GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATCAAGAGCAAAGCTCATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGCTCCCTCGTGGCCACTaGGAGTCTTTACCAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: IKWNTVQEALSQSVFNPRLPRGH*ESLPTG Trigger: CCCAGTTGGTAAAGACTCTCAGTGGCCACGAGGGAG...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354433.7 ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | GATCTGTCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCCCTCACAAATTGATGTaGATGGTTTGCAGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: DLSAFSLTGPLPPLGSHCPHKLM*MVCSCG Trigger: TCCACAGCTGCAAACCATCCACATCAATTTGTGAGG...GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | GATCTGTCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTGGAGAAGAACTCTCTaGGGAAGCTTTCTGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: DLSAFSLTGPLPPLGSHCWRRTL*GSFLLK Trigger: CTTTAGCAGAAAGCTTCCCCAGAGAGTTCTTCTCCA...GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCATGGATGACTCGGTTTTaGTCCCACGTGTCAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PLKALLLSAANLSTMVLAWMTRF*SHVSER Trigger: TCTCTCTGACACGTGGGATCAAAACCGAGTCATCCA...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCAGCAGGAGCATTGTTGTaGTGGAGAAGAACTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLKALLLSAANLSTMVLAAGALL*WRRTLW Trigger: CCAGAGAGTTCTTCTCCACCACAACAATGCTCCTGC...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATGATGCTGATGTGGCAGACTaGAATTCTGTTGCCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LCRRHCLSQSSTLGGKDDADVAD*NSVALN Trigger: ATTCAGGGCAACAGAATTTCAGTCTGCCACATCAGC...ATCATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354433.7 ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGCGCTTTTTCTTTGACTaGACCACTCCCACCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVRFFFD*TTPTSW Trigger: CCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCG...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGGGAGCATTGTTGTGGTaGAGAAGAACTCTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: IKWNTVQEALSQSVFNPRGALLW*RRTLWG Trigger: TCCCCAGAGAGTTCTTCTCCACCACAACAATGCTCC...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTCTGTCACAGGCACCTTaGCAGCAACATATCCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLLSQAP*QQHIPY Trigger: ATAAGGGATATGTTGCTGTCAAGGTGCCTGTGACAG...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATGATCATTGTCTGCAGCCAATCTaGGTACAATGGTTTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: CRRHCLSQSSTLGGKDDHCLQPI*VQWFWH Trigger: GTGCCAAAACCATTGTACTCAGATTGGCTGCAGACA...ATGATCATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | CTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTGGAAATCAGAAGTGGAATTATaGCTTCTGCTAGGAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLSAANLSTMVLAPTEWKSEVEL*LLLGEG Trigger: GCCTTCTCCTAGCAGAAGCCATAATTCCACTTCTGA...TTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 72 bp | ATGGTGCTCTCATATAGTGCTGGTGGGAGTGTAAATTaGTGCAAACTCTCTGGAGTACAGCCTGACAGTACG | + |
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Preference number: 4 (lower is better) Translates to: MVLSYSAGGSVN*CKLSGVQPDST Trigger: CGTACTGTCAGGCTGTACTCCAGAGAGTTTGCACAAATTTACACTCCCACCAGCACTATATGAGAGCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATGATCATGTCTTGATTGAGCCCTaGGATATTGTTCTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CRRHCLSQSSTLGGKDDHVLIEP*DIVLLS Trigger: AGAGAGGAGAACAATATCTCAGGGCTCAATCAAGAC...ATGATCATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGGCCAAATCAGGACTGTaGAGTGGATGCCTAATGATT | + |
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Preference number: 4 (lower is better) Translates to: IKWNTVQEALSQSVFNPRAKSGL*SGCLMI Trigger: AATCATTAGGCATCCACTTCACAGTCCTGATTTGGC...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGGGACAGAACCTATATaGATCCAGAACACTCTAATC | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVGTEPI*IQNTLI Trigger: GATTAGAGTGTTCTGGATTCATATAGGTTCTGTCCC...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGCATGAGCTTTGCTCTTaGTCTGTCCGCTTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVHELCS*SVRFFF Trigger: AAAGAAAAAGCGGACAGATCAAGAGCAAAGCTCATG...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | ACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATCATGTGCATATCATCTaGCTTAGCAGTTTCACATCT | + |
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Preference number: 4 (lower is better) Translates to: TLCRRHCLSQSSTLGGKDHVHII*LSSFTS Trigger: AGATGTGAAACTGCTAAGTCAGATGATATGCACATG...ATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTCCTCTTGGTAGCCACTaGTTTGATTGTCTTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLPLGSH*FDCLCV Trigger: AACACAAAGACAATCAAAGCAGTGGCTACCAAGAGG...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTATCAGGACTGTGAAGTaGATGCCTAATGATTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLIRTVK*MPNDFP Trigger: TGGGAAATCATTAGGCATCCACTTCACAGTCCTGAT...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGATGGTTTGCAGCTGTaGACTTTAATCTTCAACATC | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVDGLQL*TLIFNI Trigger: GATGTTGAAGATTAAAGTCCACAGCTGCAAACCATC...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGAACTCACAGAGTCCTaGGAATTTAACCATGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVELTES*EFNHVK Trigger: TTTGACATGGTTAAATTCCCAGGACTCTGTGAGTTC...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | GATTCCATACAAAGTCTACTTTTAGAAGTTGGCTCTTTTGAGAAACAGGCTTATTGTCCGCTTTTTCTTTaGCTGGACCACTCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: DSIQSLLLEVGSFEKQAYCPLFL*LDHSHL Trigger: GAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACA...ATAAGCCTGTTTCTCAAAAGAGCCAACTTCTAAAAGTAGACTTTGTATGGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGAGCCCTGCTCTTGTCTaGAGCCAATCTGAGTACAAT | + |
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Preference number: 4 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVSPALV*SQSEYN Trigger: ATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCT...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | ACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATCTAAAGTTTCCTTTCTaGGTATATAGGAGATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: TLCRRHCLSQSSTLGGKDLKFPF*VYRRCN Trigger: GTTACATCTCCTATATACCCAGAAAGGAAACTTTAG...ATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATGATCATCAATTGAGACGTCTATaGTATTGGTTGTTGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: CRRHCLSQSSTLGGKDDHQLRRL*YWLLFL Trigger: TAGAAACAACAACCAATACCATAGACGTCTCAATTG...ATGATCATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGTGTTCTTTAGCCTTCTaGAAAGGAATCAAGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SHLLVATALIVFVFRIVVCSLAF*KGIKQN Trigger: ATTTTGCTTGATTCCTTTCCAGAAGGCTAAAGAACA...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | GATTCCATACAAAGTCTACTTTTAGAAGTTGGCTCTTTTGAGAAACAGGCTTATATCCAGCAGGGTCACTaGACACTACACAAACATACC | + |
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Preference number: 4 (lower is better) Translates to: DSIQSLLLEVGSFEKQAYIQQGH*TLHKHT Trigger: GGTATGTTTGTGTAGTGTTCAGTGACCCTGCTGGAT...ATAAGCCTGTTTCTCAAAAGAGCCAACTTCTAAAAGTAGACTTTGTATGGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGGGGAGTGTAAATTTGTaGAAACTCTCTGGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVGSVNL*KLSGVQ Trigger: CTGTACTCCAGAGAGTTTGCACAAATTTACACTCCC...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 72 bp | ATTTCTCAACCTAATCTCCATCAAGGTCAAGACACTTaGGTAAGCAGTGATACCAGCCATTTAGTCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: ISQPNLHQGQDT*VSSDTSHLVYL Trigger: CAGATAGACTAAATGGCTGGTATCACTGCTTACCAAAGTGTCTTGACCTTGATGGAGATTAGGTTGAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR TCA 90 bp | AGCAGTTTCACATCTAGGAATTTATCTTCGGAATTTCTTCTAACCAGAGCTGTGCTTGATCCCATTTGTTaGAAATTTCCATTGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSFTSRNLSSEFLLTRAVLDPIC*KFPLKA Trigger: GGCTTTCAATGGAAATTTTCAACAAATGGGATCAAG...CACAGCTCTGGTTAGAAGAAATTCCGAAGATAAATTCCTAGATGTGAAACTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | GATTCCATACAAAGTCTACTTTTAGAAGTTGGCTCTTTTGAGAAACAGGCTTATACAGGTTCTAGAAGATaGTGCTCTCATATAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DSIQSLLLEVGSFEKQAYTGSRR*CSHIVL Trigger: CAGCACTATATGAGAGCACCATCTTCTAGAACCTGT...ATAAGCCTGTTTCTCAAAAGAGCCAACTTCTAAAAGTAGACTTTGTATGGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CCA 90 bp | GATTCCATACAAAGTCTACTTTTAGAAGTTGGCTCTTTTGAGAAACAGGCTTATTATTGTGTGCCATGTTaGGAAAATAGATGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DSIQSLLLEVGSFEKQAYYCVPC*ENRWFQ Trigger: CTGGAACCATCTATTTTCCCAACATGGCACACAATA...ATAAGCCTGTTTCTCAAAAGAGCCAACTTCTAAAAGTAGACTTTGTATGGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| 3UTR CAA 72 bp | TGTTCTTGCTTCTGTTTTAGCAGAATTCATGTTGCTTaGATAAGGGCTCTTTTCAAACTGATGTCTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: CSCFCFSRIHVA*IRALFKLMSYP Trigger: AGGATAAGACATCAGTTTGAAAAGAGCCCTTATCAAAGCAACATGAATTCTGCTAAAACAGAAGCAAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS TCA 90 bp | CAGCCCATCATCGGTTTTGCGTGGGTTATTACAGCACATCCCAGCTaGCTTCTCTGCCTTCTTCCTAACCCTCCTTCCATCTGTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: QPIIGFAWVITAHPS*LLCLLPNPPSICLP Trigger: TGGAAGACAGATGGAAGGAGGGTTAGGAAGAAGGCAGAGAAGTCAGCTGGGATGTGCTGTAATAACCCACGCAAAACCGATGATGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395667.7 |
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| CDS-3UTR CAA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCAGACCACTCCCACCTCTaGGTAGCCACTGCTTTGATT | + |
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Preference number: 5 (lower is better) Translates to: PLKALLLSAANLSTMVLADHSHL*VATALI Trigger: AATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTC...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | GATCTGTCCGCTTTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCGGTGGGAGTGTAAATTaGTGCAAACTCTCTGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: DLSAFSLTGPLPPLGSHCGGSVN*CKLSGV Trigger: TACTCCAGAGAGTTTGCACAAATTTACACTCCCACC...GCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAAAGCGGACAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | CCATTGAAAGCCCTGCTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCAACTGTGCAGGAGGCATaGTCTCAGTCAGTCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: PLKALLLSAANLSTMVLATVQEA*SQSVFN Trigger: GTTGAAGACTGACTGAGACAATGCCTCCTGCACAGT...TGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAGCAGGGCTTTCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGACTGTGCAGGAGGCATaGTCTCAGTCAGTCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: IKWNTVQEALSQSVFNPRTVQEA*SQSVFN Trigger: GTTGAAGACTGACTGAGACAATGCCTCCTGCACAGT...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354433.7 ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | CTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTGGAAACTGAGTACAATGGTTTaGGCACCCACTGAGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLSAANLSTMVLAPTEWKLSTMV*APTEWK Trigger: TTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAG...TTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGGGATCGCCTCTGCCATaGGCTTTTATCACCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: IKWNTVQEALSQSVFNPRGSPLP*AFITFI Trigger: TATGAAGGTGATAAAAGCCAATGGCAGAGGCGATCC...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000354433.7 ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | TCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTTGTGTTCAGGATTGTAGTGGGATCGCCTCTGCCATaGGCTTTTATCACCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SHLLVATALIVFVFRIVVGSPLP*AFITFI Trigger: TATGAAGGTGATAAAAGCCAATGGCAGAGGCGATCC...CACTACAATCCTGAACACAAAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTTTGACTGGACCACTCCCACCTCTTGGTAGCCACTGCTTTGATTGTCTTCTTTTTCAAGTCCCCTaGTATACCTCCACCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: FSLTGPLPPLGSHCFDCLLFQVP*YTSTLE Trigger: CTCTAAGGTGGAGGTATACAAGGGGACTTGAAAAAG...AAGACAATCAAAGCAGTGGCTACCAAGAGGTGGGAGTGGTCCAGTCAAAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | CTCTTGTCTGCAGCCAATCTGAGTACAATGGTTTTGGCACCCACTGAGTGGAAAGAGACGTCTATGGTATaGGTTGTTGTTTCTACCGTT | + |
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Preference number: 5 (lower is better) Translates to: LLSAANLSTMVLAPTEWKETSMV*VVVSTV Trigger: AACGGTAGAAACAACAACCAATACCATAGACGTCTC...TTTCCACTCAGTGGGTGCCAAAACCATTGTACTCAGATTGGCTGCAGACAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | ATAAAATGGAACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGATTGATGTGGATGGTTaGCAGCTGTGGACTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: IKWNTVQEALSQSVFNPRIDVDG*QLWTLI Trigger: GATTAAAGTCCACAGCTGCAAACCATCCACATCAAT...CCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGTTCCATTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS-3UTR CAA 90 bp | ACACTGTGCAGGAGGCATTGTCTCAGTCAGTCTTCAACCCTAGGAGGAAAAGATAAATGCCTCAGGATCTaGATCCCATTTGTTGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: TLCRRHCLSQSSTLGGKDKCLRI*IPFVEN Trigger: ATTTTCAACAAATGGGATCAAGATCCTGAGGCATTT...ATCTTTTCCTCCTAGGGTTGAAGACTGACTGAGACAATGCCTCCTGCACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395906.8 |
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| CDS TCA 72 bp | ATCGGTTTTGCGTGGGTTATTACAGCACATCCCAGCTaGCTTCTCTGCCTTCTTCCTAACCCTCCTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: IGFAWVITAHPS*LLCLLPNPPSI Trigger: GATGGAAGGAGGGTTAGGAAGAAGGCAGAGAAGTCAGCTGGGATGTGCTGTAATAACCCACGCAAAACCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395667.7 |
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| CDS GCA 72 bp | CATCTCAGTGCTTTAGCTTCAGCCCATCATCGGTTTTaGGTGGGTTATTACAGCACATCCCAGCTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLSALASAHHRF*VGYYSTSQLTS Trigger: AGAAGTCAGCTGGGATGTGCTGTAATAACCCACGCAAAACCGATGATGGGCTGAAGCTAAAGCACTGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395667.7 |
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