Pregenerated sensors for CDR2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000260790Ensembl transcript IDs: ENST00000567158.1, ENST00000568827.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCCCGCCTCTCAGAGGCCGGAGTCCTAGGCCCTCCGGCCTGCGTTaGCTGTCCACAGACGCGCCGGCCTCGGGACACCCACCACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RPPLRGRSPRPSGLR*LSTDAPASGHPPQG Trigger: CCCCTGTGGTGGGTGTCCCGAGGCCGGCGCGTCTGTGGACAGGCAACGCAGGCCGGAGGGCCTAGGACTCCGGCCTCTGAGAGGCGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | CGAGAAGGGGTGGCCGGGCGGCGGACCTCAGGCTTCCGGCACCCTTaGGCTTCCCGCCGGCACGAAGGACTCCCCTGGACAACCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: REGVAGRRTSGFRHP*ASRRHEGLPWTTAR Trigger: GCGGGCGGTTGTCCAGGGGAGTCCTTCGTGCCGGCGGGAAGCGCAAGGGTGCCGGAAGCCTGAGGTCCGCCGCCCGGCCACCCCTTCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | ACAACCGCCCGCCTCTCAGAGGCCGGAGTCCTAGGCCCTCCGGCCTaGGTTGCCTGTCCACAGACGCGCCGGCCTCGGGACACCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: TTARLSEAGVLGPPA*VACPQTRRPRDTHH Trigger: GTGGTGGGTGTCCCGAGGCCGGCGCGTCTGTGGACAGGCAACGCAGGCCGGAGGGCCTAGGACTCCGGCCTCTGAGAGGCGGGCGGTTGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | CCTCGAGTCTCCCCGCCGGACCCGGAGCAAATCTCAGAGTCAAGATaGGAGAAGGGGTGGCCGGGCGGCGGACCTCAGGCTTCCGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PRVSPPDPEQISESR*EKGWPGGGPQASGT Trigger: GGTGCCGGAAGCCTGAGGTCCGCCGCCCGGCCACCCCTTCTCGCATCTTGACTCTGAGATTTGCTCCGGGTCCGGCGGGGAGACTCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | TTATGTCGGTGGAGGACAGCGTGCTCTGCCTCGCTGGCTACTAAGTaGTGGAGCTGCAGCCTGTCCCCTCCAGGTGCAATGTCACGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LCRWRTACSASLATK*WSCSLSPPGAMSRP Trigger: GGGACGTGACATTGCACCTGGAGGGGACAGGCTGCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | TACCTAGGAGCAGTATTTGCTGGGTTATGTCGGTGGAGGACAGCGTaGTCTGCCTCGCTGGCTACTAAGTGCTGGAGCTGCAGCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: YLGAVFAGLCRWRTA*SASLATKCWSCSLS Trigger: GGACAGGCTGCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGCTCCTAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | TTTGTCTGCAAGATGGTGCTTAAAGCTTTACCTAGGAGCAGTATTTaGTGGGTTATGTCGGTGGAGGACAGCGTGCTCTGCCTCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FVCKMVLKALPRSSI*WVMSVEDSVLCLAG Trigger: GCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTTGCAGACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 90 bp | TCTGTCATCCTGCTTAAGAGTTTCCGTGCTTTGTCTGCAAGATGGTaGTTAAAGCTTTACCTAGGAGCAGTATTTGCTGGGTTATGTCGG | + |
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Preference number: 5 (lower is better) Translates to: SVILLKSFRALSARW*LKLYLGAVFAGLCR Trigger: CCGACATAACCCAGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTTGCAGACAAAGCACGGAAACTCTTAAGCAGGATGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | GTGGCCGGGCGGCGGACCTCAGGCTTCCGGCACCCTTaGGCTTCCCGCCGGCACGAAGGACTCCCCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: VAGRRTSGFRHP*ASRRHEGLPWT Trigger: TGTCCAGGGGAGTCCTTCGTGCCGGCGGGAAGCGCAAGGGTGCCGGAAGCCTGAGGTCCGCCGCCCGGCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | CTCAGAGGCCGGAGTCCTAGGCCCTCCGGCCTGCGTTaGCTGTCCACAGACGCGCCGGCCTCGGGACACCCA | + |
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Preference number: 6 (lower is better) Translates to: LRGRSPRPSGLR*LSTDAPASGHP Trigger: TGGGTGTCCCGAGGCCGGCGCGTCTGTGGACAGGCAACGCAGGCCGGAGGGCCTAGGACTCCGGCCTCTGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | CACCCTTGCGCTTCCCGCCGGCACGAAGGACTCCCCTaGACAACCGCCCGCCTCTCAGAGGCCGGAGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HPCASRRHEGLP*TTARLSEAGVL Trigger: TAGGACTCCGGCCTCTGAGAGGCGGGCGGTTGTCCAGGGGAGTCCTTCGTGCCGGCGGGAAGCGCAAGGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | CCGGAGCAAATCTCAGAGTCAAGATGCGAGAAGGGGTaGCCGGGCGGCGGACCTCAGGCTTCCGGCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: PEQISESRCEKG*PGGGPQASGTL Trigger: AAGGGTGCCGGAAGCCTGAGGTCCGCCGCCCGGCCACCCCTTCTCGCATCTTGACTCTGAGATTTGCTCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | TGGAGGACAGCGTGCTCTGCCTCGCTGGCTACTAAGTaGTGGAGCTGCAGCCTGTCCCCTCCAGGTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: WRTACSASLATK*WSCSLSPPGAM Trigger: CATTGCACCTGGAGGGGACAGGCTGCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | GGTTATGTCGGTGGAGGACAGCGTGCTCTGCCTCGCTaGCTACTAAGTGCTGGAGCTGCAGCCTGTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GYVGGGQRALPR*LLSAGAAACPL Trigger: GAGGGGACAGGCTGCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | AGGACAGCGTGCTCTGCCTCGCTGGCTACTAAGTGCTaGAGCTGCAGCCTGTCCCCTCCAGGTGCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: RTACSASLATKC*SCSLSPPGAMS Trigger: TGACATTGCACCTGGAGGGGACAGGCTGCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | GCAGTATTTGCTGGGTTATGTCGGTGGAGGACAGCGTaGTCTGCCTCGCTGGCTACTAAGTGCTGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AVFAGLCRWRTA*SASLATKCWSC Trigger: GCAGCTCCAGCACTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | GGCTCAGATGTCAAGGAGACAAGAGCTACCGCTCAGTaGGCGTTTTCTCAACCCAAACTCCCGATCGACCTC | + |
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Preference number: 6 (lower is better) Translates to: GSDVKETRATAQ*AFSQPKLPIDL Trigger: GAGGTCGATCGGGAGTTTGGGTTGAGAAAACGCCCACTGAGCGGTAGCTCTTGTCTCCTTGACATCTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | TCGTTGCAACACTGCTTACAATTTTCGCCCTCCAAGTaGACAGCTTCGGGCATCCCTCACCGCCCCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: SLQHCLQFSPSK*TASGIPHRPRF Trigger: GAATCTGGGGCGGTGAGGGATGCCCGAAGCTGTCCACTTGGAGGGCGAAAATTGTAAGCAGTGTTGCAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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| CDS CCA 72 bp | CTTTACCTAGGAGCAGTATTTGCTGGGTTATGTCGGTaGAGGACAGCGTGCTCTGCCTCGCTGGCTACTAAG | + |
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Preference number: 6 (lower is better) Translates to: LYLGAVFAGLCR*RTACSASLATK Trigger: CTTAGTAGCCAGCGAGGCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGCTCCTAGGTAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | ATGGTGCTTAAAGCTTTACCTAGGAGCAGTATTTGCTaGGTTATGTCGGTGGAGGACAGCGTGCTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: MVLKALPRSSIC*VMSVEDSVLCL Trigger: GAGGCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | AAGATGGTGCTTAAAGCTTTACCTAGGAGCAGTATTTaGTGGGTTATGTCGGTGGAGGACAGCGTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KMVLKALPRSSI*WVMSVEDSVLC Trigger: GCAGAGCACGCTGTCCTCCACCGACATAACCCAGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS GCA 72 bp | GTGAGCCACCGTGTCCAGCCTCGGAAAACTCTTAATTaGTTCCCATTTTTAGTTCTGGCAGCTCTCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: VSHRVQPRKTLN*FPFLVLAALSI Trigger: TATGGAGAGAGCTGCCAGAACTAAAAATGGGAAGCAATTAAGAGTTTTCCGAGGCTGGACACGGTGGCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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| CDS CAA 90 bp | GCCCTGTTGTCTTCCATCAGCTGCACCTTTACCTTTACGTCAAGGTaGAGAACATTGACCTTCAGGTCTGTCATCCTGCTTAAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALLSSISCTFTFTSR*RTLTFRSVILLKSF Trigger: GAAACTCTTAAGCAGGATGACAGACCTGAAGGTCAATGTTCTCAACCTTGACGTAAAGGTAAAGGTGCAGCTGATGGAAGACAACAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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| CDS GCA 72 bp | CTGCTTAAGAGTTTCCGTGCTTTGTCTGCAAGATGGTaGTTAAAGCTTTACCTAGGAGCAGTATTTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLKSFRALSARW*LKLYLGAVFAG Trigger: CCCAGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTTGCAGACAAAGCACGGAAACTCTTAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CAA 72 bp | TCTTCCATCAGCTGCACCTTTACCTTTACGTCAAGGTaGAGAACATTGACCTTCAGGTCTGTCATCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSISCTFTFTSR*RTLTFRSVILL Trigger: AAGCAGGATGACAGACCTGAAGGTCAATGTTCTCAACCTTGACGTAAAGGTAAAGGTGCAGCTGATGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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| CDS CAA 90 bp | ACATTGACCTTCAGGTCTGTCATCCTGCTTAAGAGTTTCCGTGCTTaGTCTGCAAGATGGTGCTTAAAGCTTTACCTAGGAGCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: TLTFRSVILLKSFRA*SARWCLKLYLGAVF Trigger: AAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTTGCAGACAAAGCACGGAAACTCTTAAGCAGGATGACAGACCTGAAGGTCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | ATCCTGCTTAAGAGTTTCCGTGCTTTGTCTGCAAGATaGTGCTTAAAGCTTTACCTAGGAGCAGTATTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILLKSFRALSAR*CLKLYLGAVFA Trigger: AGCAAATACTGCTCCTAGGTAAAGCTTTAAGCACCATCTTGCAGACAAAGCACGGAAACTCTTAAGCAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567158.1 ENST00000568827.1 |
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| CDS CCA 72 bp | CTGGCAGCTCTCTCCATATTTGTGGAAACTATTCATTaGATTATCAATGTAAGGTATTATCTGTCGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: LAALSIFVETIH*IINVRYYLSTH Trigger: GTGAGTCGACAGATAATACCTTACATTGATAATCCAATGAATAGTTTCCACAAATATGGAGAGAGCTGCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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| CDS CAA 72 bp | TCTGGCAGCTCTCTCCATATTTGTGGAAACTATTCATaGGATTATCAATGTAAGGTATTATCTGTCGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSSLHICGNYS*DYQCKVLSVDS Trigger: TGAGTCGACAGATAATACCTTACATTGATAATCCAATGAATAGTTTCCACAAATATGGAGAGAGCTGCCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568827.1 |
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