RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDON (Homo sapiens)

Ensembl gene IDs: ENSG00000064309

Ensembl transcript IDs: ENST00000263577.11, ENST00000392693.7, ENST00000525625.2, ENST00000531738.6, ENST00000531830.2, ENST00000680589.1, ENST00000682450.1, ENST00000682556.1, ENST00000682796.1, ENST00000682834.1, ENST00000683026.1, ENST00000683416.1, ENST00000683597.1, ENST00000683716.1, ENST00000683981.1, ENST00000684078.1, ENST00000684238.1, ENST00000684636.1

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTTCCCTCCAAGGAAACGCAAAGTTGCCCCGAGGAGGTGGGCCTaGCTCCACATCGCCCCCAGGGTCAGGTATGTTCTCAGCGTCCCC +
Preference number: 1 (lower is better)
Translates to: PFPPRKRKVAPRRWA*LHIAPRVRYVLSVP
Trigger: GGGGACGCTGAGAACATACCTGACCCTGGGGGCGATGTGGAGGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTaGAGATGTAGCTTCCCGCCCCCAGGCTGGGGGAGCTGGCCCACA +
Preference number: 1 (lower is better)
Translates to: SDSRSRSPQDTEQRY*RCSFPPPGWGSWPT
Trigger: TGTGGGCCAGCTCCCCCAGCCTGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 90 bp ACTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGGAGACACAGATaGGAAGAAACGGCAAGAAAGCCAACGGGGGACCCGCCAGCACAA +
Preference number: 1 (lower is better)
Translates to: TRRLGTPSRLCRRHR*EETARKPTGDPPAQ
Trigger: TTGTGCTGGCGGGTCCCCCGTTGGCTTTCTTGCCGTTTCTTCTCATCTGTGTCTCCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 90 bp CATGGTTACAAGAGAAGCCCTGGCCCACCTTGTGGAAGACAGAGGTaGCAGGACAAGGAAGAGGACCCACAATGGGGAGACAGGGATCTC +
Preference number: 1 (lower is better)
Translates to: HGYKRSPGPPCGRQR*QDKEEDPQWGDRDL
Trigger: GAGATCCCTGTCTCCCCATTGTGGGTCCTCTTCCTTGTCCTGCCACCTCTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 90 bp CAAGGAAGAGGACCCACAATGGGGAGACAGGGATCTCTGGGTGTCTaGGGGCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTGGTGCT +
Preference number: 1 (lower is better)
Translates to: QGRGPTMGRQGSLGV*GQVKAMVLGRICGA
Trigger: AGCACCACAGATCCTTCCCAGTACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGGGTCCTCTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 90 bp CTGGCCCACAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTaGCAGCATGACTCACTAGCTCCAAGTGTGTGTGTCTGTTTGTGT +
Preference number: 1 (lower is better)
Translates to: LAHRAPGLFQSHNVS*QHDSLAPSVCVCLC
Trigger: ACACAAACAGACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTGACTCTGGAACAGCCCCGGTGCTCTGTGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTaGTCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: VPLLNHSLRTSLTLQ*SDSRSRSPQDTEQR
Trigger: CCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 90 bp CAGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATaGCTCACTAGCTCCAAGTGTGTGTGTCTGTTTGTGTGTGTGTCT +
Preference number: 1 (lower is better)
Translates to: QSTGAVPESQCQLPA*LTSSKCVCLFVCVS
Trigger: AGACACACACACAAACAGACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTGACTCTGGAACAGCCCCGGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 90 bp TGTAGGTGTGTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTaGCGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCCCACAAGATA +
Preference number: 1 (lower is better)
Translates to: CRCVFLCSTIAYEHH*RCSGPTPGVAAHKI
Trigger: TATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACACACACCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 90 bp CATGTCCTCTCATTTCCTGGTGAAGTGACATTAGGTAGGACTGTTTaGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTAGGGAGAACT +
Preference number: 1 (lower is better)
Translates to: HVLSFPGEVTLGRTV*VPVQGRANSRLGRT
Trigger: AGTTCTCCCTAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAATGTCACTTCACCAGGAAATGAGAGGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 90 bp TGTGTCTGTAATCTGGGTGAAAACACAAATGAATGCTTGTTCAACTaGCTAGAAGACTCGGGACTCCGAGCCGCCTCTGCAGGAGACACA +
Preference number: 1 (lower is better)
Translates to: CVCNLGENTNECLFN*LEDSGLRAASAGDT
Trigger: TGTGTCTCCTGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCATTTGTGTTTTCACCCAGATTACAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 90 bp CTGTGCGCTGGGACTTTGTCCTTTGCTAGTCACAGAAGTAAGGGATaGAGCTATCCCCCTCCAGAGCTAACTGCATTTAAGCAACATGAA +
Preference number: 1 (lower is better)
Translates to: LCAGTLSFASHRSKG*SYPPPELTAFKQHE
Trigger: TTCATGTTGCTTAAATGCAGTTAGCTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 90 bp GAGGAATTCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTaGTTCCATCCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTA +
Preference number: 1 (lower is better)
Translates to: EEFHGRDRSQHTERD*FHPKSEPQCFWKAV
Trigger: TACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGAATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 90 bp ATAAGGCCCAAAGAGGAAGATGCAAATAGGCTTAGGGAGGGCAGGTaGGATTTGGGAAGAGCCCTTCTGTCAGACTTTGGTCATAAAACC +
Preference number: 1 (lower is better)
Translates to: IRPKEEDANRLREGR*DLGRALLSDFGHKT
Trigger: GGTTTTATGACCAAAGTCTGACAGAAGGGCTCTTCCCAAATCCCACCTGCCCTCCCTAAGCCTATTTGCATCTTCCTCTTTGGGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 90 bp ACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTaGAACACCATAAGGCCCAAAGAGGAAGATGCAAATAGGCTTAGG +
Preference number: 1 (lower is better)
Translates to: TRNHGFSSECHHHSD*NTIRPKEEDANRLR
Trigger: CCTAAGCCTATTTGCATCTTCCTCTTTGGGCCTTATGGTGTTGCAGTCACTGTGATGGTGACATTCACTGGAGAATCCGTGGTTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 90 bp AGCTGGAATGAGATCTGTGGCATGATCAGCCCAAGATGGATGCATTaGGTCTTCATAGACTCATTCGACAAAAACACCCAGAAAGAAAGG +
Preference number: 1 (lower is better)
Translates to: SWNEICGMISPRWMH*VFIDSFDKNTQKER
Trigger: CCTTTCTTTCTGGGTGTTTTTGTCGAATGAGTCTATGAAGACTCAATGCATCCATCTTGGGCTGATCATGCCACAGATCTCATTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 90 bp ATAAATCCAGTATACTATAGGCACGGACATCTGGAATGTAGAACTTaGGTCTACAGCATCCCTAATATCCGACTAGGGAATTACATTCAC +
Preference number: 1 (lower is better)
Translates to: INPVYYRHGHLECRT*VYSIPNIRLGNYIH
Trigger: GTGAATGTAATTCCCTAGTCGGATATTAGGGATGCTGTAGACCCAAGTTCTACATTCCAGATGTCCGTGCCTATAGTATACTGGATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 90 bp TCTTTCCCCAAAGGGATGCACAATGCACAAAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTATGAAACACACTTACATAATTATTGT +
Preference number: 1 (lower is better)
Translates to: SFPKGMHNAQRSSDP*KLDSSYETHLHNYC
Trigger: ACAATAATTATGTAAGTGTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCCCTTTGGGGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 90 bp GAAAGTTGGTTAACACAGTATTGTATTCTATTCCACTGCGATTTCTaGGAAACTAACATTTCTTCACTTCTGCTGGAATTGCTTGACTCT +
Preference number: 1 (lower is better)
Translates to: ESWLTQYCILFHCDF*ETNISSLLLELLDS
Trigger: AGAGTCAAGCAATTCCAGCAGAAGTGAAGAAATGTTAGTTTCCCAGAAATCGCAGTGGAATAGAATACAATACTGTGTTAACCAACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 90 bp AGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTaGGAGCCTCGGAGGAATTCCACGGCAGGGATAGATCACAGCATA +
Preference number: 2 (lower is better)
Translates to: SSARGGQRAASLAAE*EPRRNSTAGIDHSI
Trigger: TATGCTGTGATCTATCCCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGCTGGAGATGGGGGATaGCTAGTTTCGGCGTCATGG +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRAGDGG*LVSASW
Trigger: CCATGACGCCGAAACTAGTCATCCCCCATCTCCAGC...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCCAAGATCGAGCCATTaGACTCCAGCCTGGATGACA +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRPRSSH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTCTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCLGGGG*SEPRSS
Trigger: GCTCGATCTTGGCTCACTGCAACCTCCGCCTCCCAG...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR GCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGCAGCTTCTCTGGCTaGGGAGTTGGAGCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCSSFSG*GVGASE
Trigger: CTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR GCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAAGGAAACGCAAAGTTaGCCCGAGGAGGTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCKETQS*PEEVGL
Trigger: CAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTCTCTGGCTGCGGAGTTaGAGCCTCGGAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCLWLRS*SLGGIP
Trigger: TGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAG...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGATGGGATCCTTTGCATaGGGAGCTCTTGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: EVISRALPAEAREQLLWLMGSFA*GALAVT
Trigger: AGTGACAGCAAGAGCTCCTCATGCAAAGGATCCCAT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCCATGGCTCACTGAGTaGCTTGGGGATTTTAATGCC +
Preference number: 2 (lower is better)
Translates to: EVISRALPAEAREQLLWLPWLTE*LGDFNA
Trigger: GGCATTAAAATCCCCAAGTCACTCAGTGAGCCATGG...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCATACGGAACGGGACTaGTTCCATCCAAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRHTERD*FHPKSE
Trigger: TTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGACGTCCATAACACTATaGCTAGTGCCTAGCAAACTG +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRTSITL*LVPSKL
Trigger: CAGTTTGCTAGGCACTAGTCATAGTGTTATGGACGT...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGCTGTCTACGGACAATaGCTCCCCAGTTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRAVYGQ*LPSFLK
Trigger: TTTTAGAAAACTGGGGAGTCATTGTCCGTAGACAGC...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCTTTCCCCAAAGGGATaGACAATGCACAAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: EVISRALPAEAREQLLWLLSPKG*TMHKGA
Trigger: TGCTCCTTTGTGCATTGTGCATCCCTTTGGGGAAAG...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTGCTAATCCAACAGACTaGAGAGCTCCCGCCAAGACA +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCANPTD*RAPAKT
Trigger: TGTCTTGGCGGGAGCTCTCCAGTCTGTTGGATTAGC...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGACCGAGCACAGTGCCTaGTACACAGTAGTTATTCAG +
Preference number: 2 (lower is better)
Translates to: EVISRALPAEAREQLLWLTEHSA*YTVVIQ
Trigger: CTGAATAACTACTGTGTACCAGGCACTGTGCTCGGT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAAGCAGCTTCTCTGGCTaGGGAGTTGGAGCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSSFSG*GVGASE
Trigger: CTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTCATTGCAATGTAACTTaGACCCTGGCAGCACCTGTC +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCHCNVT*TLAAPV
Trigger: GACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATG...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGCACTCCAGCCTGGATaGCAGCAAGACTCCATCTCA +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVALQPG*QQDSIS
Trigger: TGAGATGGAGTCTTGCTGTCATCCAGGCTGGAGTGC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACACAGAAGTAAGGGATaGAGCTATCCCCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRHRSKG*SYPPPE
Trigger: CTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTAATCCTCGCACTTTaGGAGGCGGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTVILAL*EAEAGG
Trigger: TCCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTAC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCGGCGGGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTGGRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCCCGCC...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGCTGGAGATGGGGGATaGCTAGTTTCGGCGTCATGG +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTAGDGG*LVSASW
Trigger: CCATGACGCCGAAACTAGTCATCCCCCATCTCCAGC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTCTGCTGGAATTGCTTaGCTCTATAGAAAGAGAATA +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRSAGIA*LYRKRI
Trigger: TATTCTCTTTCTATAGAGTCAAGCAATTCCAGCAGA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACACAATTAGCTGGACGTaGTGGCAGGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDTISWT*WQVPVV
Trigger: GACTACAGGCACCTGCCACCACGTCCAGCTAATTGT...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGACAATTAGCTGGACGTaGTGGCAGGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVTISWT*WQVPVV
Trigger: GACTACAGGCACCTGCCACCACGTCCAGCTAATTGT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGGCCGTTGCCTATGCTaGAGATGGGGGATGACTAGT +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTGRCLC*RWGMTS
Trigger: ACTAGTCATCCCCCATCTCCAGCATAGGCAACGGCC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTTCCACTGCGATTTCTaGGAAACTAACATTTCTTCA +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRFHCDF*ETNISS
Trigger: TGAAGAAATGTTAGTTTCCCAGAAATCGCAGTGGAA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTTTCCTAAATCAAAATaGCTGTCTACGGACAATGAC +
Preference number: 2 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRFPKSK*LSTDND
Trigger: GTCATTGTCCGTAGACAGCCATTTTGATTTAGGAAA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLLGGGG*SEPRSS
Trigger: GCTCGATCTTGGCTCACTGCAACCTCCGCCTCCCAG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAGGCGGGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKGGRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCCCGCC...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTAT +
Preference number: 2 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRRSSDP*KLDSSY
Trigger: ATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACATCACTCGTGCCCACGTaGAGATACAAAGTCAACAGG +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSLVPT*RYKVNR
Trigger: CCTGTTGACTTTGTATCTGCACGTGGGCACGAGTGA...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTGCCTATGCTGGAGATaGGGGATGACTAGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTCLCWR*GMTSFG
Trigger: GCCGAAACTAGTCATCCCCCATCTCCAGCATAGGCA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCGGCCGTTGCCTATGCTaGAGATGGGGGATGACTAGT +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTGRCLC*RWGMTS
Trigger: ACTAGTCATCCCCCATCTCCAGCATAGGCAACGGCC...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACACGTGAAATGATACAGTaGGAGCGGGGCAGTTTATGC +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTREMIQ*ERGSLC
Trigger: GCATAAACTGCCCCGCTCCCACTGTATCATTTCACG...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 90 bp AACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTaGCTAGTCACAGAAGTAAGGGATGCAGCTATCCCCCTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: NTGYVFIFCALGLCP*LVTEVRDAAIPLQS
Trigger: GCTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACGGGGCTGGGTTCCCATaGACGTCGCAGGTAAAGTGT +
Preference number: 2 (lower is better)
Translates to: SSVWKTLVLFPAILSILHGAGFP*TSQVKC
Trigger: ACACTTTACCTGCGACGTTCATGGGAACCCAGCCCC...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAAGAGATGGGATCCTTTaGATGAGGAGCTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTRDGIL*MRSSCC
Trigger: ACAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCCAAGATCGAGCCATTaGACTCCAGCCTGGATGACA +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTPRSSH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGCAGGCCGTTGCCTATaGTGGAGATGGGGGATGACT +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFAGRCL*WRWGMT
Trigger: AGTCATCCCCCATCTCCAGCATAGGCAACGGCCTGC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAGCAGGCCGTTGCCTATaGTGGAGATGGGGGATGACT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKAGRCL*WRWGMT
Trigger: AGTCATCCCCCATCTCCAGCATAGGCAACGGCCTGC...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGCCAGTTGCTTCCTGGTaGAATGTCCTGCCCGTCCTT +
Preference number: 2 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSPVASW*NVLPVL
Trigger: AAGGACGGGCAGGACATTGCACCAGGAAGCAACTGG...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTACAAGACAATTAGCTaGACGTGGTGGCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTYKTIS*TWWQVP
Trigger: AGGCACCTGCCACCACGTCCAGCTAATTGTCTTGTA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTTTCCACTGCGATTTCTaGGAAACTAACATTTCTTCA +
Preference number: 2 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCFHCDF*ETNISS
Trigger: TGAAGAAATGTTAGTTTCCCAGAAATCGCAGTGGAA...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTTAGGTAGGACTGTTTaGGTGCCTGTGCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTLGRTV*VPVQGR
Trigger: TCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAACCGAGCACAGTGCCTaGTACACAGTAGTTATTCAG +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTTEHSA*YTVVIQ
Trigger: CTGAATAACTACTGTGTACCAGGCACTGTGCTCGGT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCAGCAGTATGGAAAAATaGGAGGAGCCCAGATTATGG +
Preference number: 2 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTSSMEK*EEPRLW
Trigger: CCATAATCTGGGCTCCTCCCATTTTTCCATACTGCT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCAGGTACAGTTGGGGGCTaGGTTCCCATGAACGTCGCA +
Preference number: 2 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSGTVGG*VPMNVA
Trigger: TGCGACGTTCATGGGAACCCAGCCCCCAACTGTACC...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAGACCATTTTCCACCTaGAAACCCAGCTGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: GCTMHKGAVILESLTQAMRPFST*KPSWWQ
Trigger: TTGCCACCAGCTGGGTTTTCAGGTGGAAAATGGTCT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAAAGTAAGTCTTTTCTaGCACTCACCCCTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTKVSLF*HSPLQA
Trigger: GGCCTGCAGGGGTGAGTGTCAGAAAAGACTTACTTT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGCTGTCTACGGACAATaGCTCCCCAGTTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTAVYGQ*LPSFLK
Trigger: TTTTAGAAAACTGGGGAGTCATTGTCCGTAGACAGC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGATTAAAAGGAGATCGTaGAATGATACAGTGGGAGCG +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVIKRRS*NDTVGA
Trigger: CGCTCCCACTGTATCATTTCACGATCTCCTTTTAAT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACAGGGGCTATGCTATATaGAAGCAGCCTTCTCTTTTA +
Preference number: 2 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDRGYAI*KQPSLL
Trigger: TAAAAGAGAAGGCTGCTTTCATATAGCATAGCCCCT...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGCTTACGAACATCACTaGCGCTGCAGTGGTCCGACT +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFAYEHH*RCSGPT
Trigger: AGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAACTGGAAGTAACTCTTaGATAGTGACCCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRTGSNS*IVTQLK
Trigger: TTTAAGCTGGGTCACTATGCAAGAGTTACTTCCAGT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGCCTGGTGCAATGTCCTaGCCGTCCTTTAGCCAATAC +
Preference number: 2 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSPGAMS*PSFSQY
Trigger: GTATTGGCTAAAGGACGGGCAGGACATTGCACCAGG...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAGCTAATCCAACAGACTaGAGAGCTCCCGCCAAGACA +
Preference number: 2 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLANPTD*RAPAKT
Trigger: TGTCTTGGCGGGAGCTCTCCAGTCTGTTGGATTAGC...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCCTGGAATGTAGAACTTaGGTCTACAGCATCCCTAAT +
Preference number: 2 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTLECRT*VYSIPN
Trigger: ATTAGGGATGCTGTAGACCCAAGTTCTACATTCCAG...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAAGCAGTATGGAAAAATaGGAGGAGCCCAGATTATGG +
Preference number: 2 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSSMEK*EEPRLW
Trigger: CCATAATCTGGGCTCCTCCCATTTTTCCATACTGCT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAAGACCATTTTCCACCTaGAAACCCAGCTGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLRPFST*KPSWWQ
Trigger: TTGCCACCAGCTGGGTTTTCAGGTGGAAAATGGTCT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTACGTCCATAACACTATaGCTAGTGCCTAGCAAACTG +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTTSITL*LVPSKL
Trigger: CAGTTTGCTAGGCACTAGTCATAGTGTTATGGACGT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCAAAATAGACAATGTGTaGGGCGGGACCGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFKIDNV*GGTAPP
Trigger: AGGAGGAGCGGTCCCGCCTCACACATTGTCTATTTT...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCTGTCAGCTGCCAGCATaGCTCACTAGCTCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFCQLPA*LTSSKC
Trigger: ACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACA...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGTCACAAAGTAAGCATTaGTGGGCAGCCCACCATCCT +
Preference number: 2 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSSQSKH*WAAHHP
Trigger: AGGATGGTGGGCTGCCCATCAATGCTTACTTTGTGA...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCTTTCCCCAAAGGGATaGACAATGCACAAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTLSPKG*TMHKGA
Trigger: TGCTCCTTTGTGCATTGTGCATCCCTTTGGGGAAAG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGAAGAGTGAACCACAATaGTTTTGGAAAGCAGTATGG +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVKSEPQ*FWKAVW
Trigger: CCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACTAGTTTCGGCGTCATaGCACCATAAGCGTGTCCCT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKLVSAS*HHKRVP
Trigger: AGGGACACGCTTATGGTGCCATGACGCCGAAACTAG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATGCCTATGCTGGAGATaGGGGATGACTAGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKCLCWR*GMTSFG
Trigger: GCCGAAACTAGTCATCCCCCATCTCCAGCATAGGCA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCATACGGAACGGGACTaGTTCCATCCAAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTHTERD*FHPKSE
Trigger: TTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTCAAGGGGAGAAATGTaGACCTCTGGAAGACGAAGT +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTSRGEM*TSGRRS
Trigger: ACTTCGTCTTCCAGAGGTCCACATTTCTCCCCTTGA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCAGAAACCAGGTACAGTTaGGGGCTGGGTTCCCATGAA +
Preference number: 2 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSETRYS*GLGSHE
Trigger: TTCATGGGAACCCAGCCCCCAACTGTACCTGGTTTC...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACGAGCTTGCACCAGCTTaGGACAGGACGAAGTACACA +
Preference number: 2 (lower is better)
Translates to: SSVWKTLVLFPAILSILHELAPA*DRTKYT
Trigger: TGTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTC...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAATGGGATCCTTTGCATaGGGAGCTCTTGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKMGSFA*GALAVT
Trigger: AGTGACAGCAAGAGCTCCTCATGCAAAGGATCCCAT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTTTAAAAGCAGTTCATaGCCTAAGGCTCATGCTAAT +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVFKSSS*PKAHAN
Trigger: ATTAGCATGAGCCTTAGGTCATGAACTGCTTTTAAA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATCACTCGTGCCCACGTaGAGATACAAAGTCAACAGG +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKSLVPT*RYKVNR
Trigger: CCTGTTGACTTTGTATCTGCACGTGGGCACGAGTGA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGTCCGTCTGCAACCTTTaGACTTACTGGTGCCGTAAT +
Preference number: 2 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSSVCNL*TYWCRN
Trigger: ATTACGGCACCAGTAAGTGCAAAGGTTGCAGACGGA...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATACAAGACAATTAGCTaGACGTGGTGGCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKYKTIS*TWWQVP
Trigger: AGGCACCTGCCACCACGTCCAGCTAATTGTCTTGTA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCATAGGCACGGACATCTaGAATGTAGAACTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTIGTDI*NVELGS
Trigger: AGACCCAAGTTCTACATTCCAGATGTCCGTGCCTAT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGAACCACAATGCTTTTaGAAAGCAGTATGGAAAAAT +
Preference number: 2 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVEPQCF*KAVWKN
Trigger: ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTAT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKRSSDP*KLDSSY
Trigger: ATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTGTTTTCATATTCTGTaGGCTGGGACTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTCFHIL*AGTLSF
Trigger: AAAGGACAAAGTCCCAGCGCACAGAATATGAAAACA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAATAGGCACGGACATCTaGAATGTAGAACTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKIGTDI*NVELGS
Trigger: AGACCCAAGTTCTACATTCCAGATGTCCGTGCCTAT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTATTTTCTCTTCCTCGTaGACAGATCCCATATTCAAA +
Preference number: 2 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTIFSSS*TDPIFK
Trigger: TTTGAATATGGGATCTGTCCACGAGGAAGAGAAAAT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACATGCCTGTGAATGGGTaGGGTGAAGAATGTGAACAT +
Preference number: 2 (lower is better)
Translates to: SSVWKTLVLFPAILSILHMPVNG*GEECEH
Trigger: ATGTTCACATTCTTCACCCCACCCATTCACAGGCAT...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR TCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGTTCCATCCAAAGAGTaGACCACAATGCTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFVPSKE*TTMLLE
Trigger: TTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAAC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCAAATGTGAACATCATCTaGAGAAGGACGACTCACAAG +
Preference number: 2 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSNVNII*RRTTHK
Trigger: CTTGTGAGTCGTCCTTCTTCAGATGATGTTCACATT...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR GCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTATCCTTTTCTGCATACTaGCGTAATTCATCAAGACCT +
Preference number: 2 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLSFSAY*RNSSRP
Trigger: AGGTCTTGATGAATTACGGCAGTATGCAGAAAAGGA...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTTTCCTAAATCAAAATaGCTGTCTACGGACAATGAC +
Preference number: 2 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTFPKSK*LSTDND
Trigger: GTCATTGTCCGTAGACAGCCATTTTGATTTAGGAAA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATCCTTTTCTGCATACTaGCGTAATTCATCAAGACCT +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKSFSAY*RNSSRP
Trigger: AGGTCTTGATGAATTACGGCAGTATGCAGAAAAGGA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCACTGGAAGTAACTCTTaGATAGTGACCCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFTGSNS*IVTQLK
Trigger: TTTAAGCTGGGTCACTATGCAAGAGTTACTTCCAGT...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCAAGAGTGAACCACAATaGTTTTGGAAAGCAGTATGG +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFKSEPQ*FWKAVW
Trigger: CCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTT...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAGTTCAAAACCAGCCTaGAACCTTGTCTCTAATAAA +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKSSKPA*NLVSNK
Trigger: TTTATTAGAGACAAGGTTTCAGGCTGGTTTTGAACT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAAAGGTTTAGAACATTaGAATGTAACTTGCACCCTG +
Preference number: 2 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKKGLEH*NVTCTL
Trigger: CAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCATTTTCTCTTCCTCGTaGACAGATCCCATATTCAAA +
Preference number: 2 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFIFSSS*TDPIFK
Trigger: TTTGAATATGGGATCTGTCCACGAGGAAGAGAAAAT...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAGTTCAAAACCAGCCTaGAACCTTGTCTCTAATAAA +
Preference number: 2 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSSKPA*NLVSNK
Trigger: TTTATTAGAGACAAGGTTTCAGGCTGGTTTTGAACT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTCTGCTGGAATTGCTTaGCTCTATAGAAAGAGAATA +
Preference number: 2 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSAGIA*LYRKRI
Trigger: TATTCTCTTTCTATAGAGTCAAGCAATTCCAGCAGA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp CTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTaGGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: LCPRRPESSFSG*GVGASEEFHGR
Trigger: CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp AGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTaGAGATGTAGCTTCCCGCCCCCAGGCTGGGGGAGC +
Preference number: 3 (lower is better)
Translates to: RSRSPQDTEQRY*RCSFPPPGWGS
Trigger: GCTCCCCCAGCCTGGGGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 72 bp CCCCTGCAGGCCGTTGCCTATGCTGGAGATGGGGGATaGCTAGTTTCGGCGTCATGGCACCATAAGCGTGTC +
Preference number: 3 (lower is better)
Translates to: PLQAVAYAGDGG*LVSASWHHKRV
Trigger: GACACGCTTATGGTGCCATGACGCCGAAACTAGTCATCCCCCATCTCCAGCATAGGCAACGGCCTGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACACCCCTGCAGGCCGTaGCCTATGCTGGAGATGGGG +
Preference number: 3 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRHPCRP*PMLEMG
Trigger: CCCCATCTCCAGCATAGGCAACGGCCTGCAGGGGTG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 72 bp GGACCCACAATGGGGAGACAGGGATCTCTGGGTGTCTaGGGGCAAGTGAAAGCCATGGTACTGGGAAGGATC +
Preference number: 3 (lower is better)
Translates to: GPTMGRQGSLGV*GQVKAMVLGRI
Trigger: GATCCTTCCCAGTACCATGGCTTTCACTTGCCCTCAGACACCCAGAGATCCCTGTCTCCCCATTGTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 72 bp GAGCTGATGTTCACGCCAATAGAGGGCTACTTCCATTaGGACTCCCACAGAGACAGGCTGATGGCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: ELMFTPIEGYFH*DSHRDRLMAGS
Trigger: GGACCCAGCCATCAGCCTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTCTATTGGCGTGAACATCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 72 bp CTTCCATTGCGACTCCCACAGAGACAGGCTGATGGCTaGGTCCCAGGTTTGGCTAGTGGGAAGAAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: LPLRLPQRQADG*VPGLASGKKQG
Trigger: ACCTTGCTTCTTCCCACTAGCCAAACCTGGGACCCAGCCATCAGCCTGTCTCTGTGGGAGTCGCAATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 72 bp GTGACATGGTTACAAGAGAAGCCCTGGCCCACCTTGTaGAAGACAGAGGTGGCAGGACAAGGAAGAGGACCC +
Preference number: 3 (lower is better)
Translates to: VTWLQEKPWPTL*KTEVAGQGRGP
Trigger: GGGTCCTCTTCCTTGTCCTGCCACCTCTGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 72 bp GTGTTCCTTTGCTCAACCATAGCTTACGAACATCACTaGCGCTGCAGTGGTCCGACTCCAGGAGTCGCAGCC +
Preference number: 3 (lower is better)
Translates to: VFLCSTIAYEHH*RCSGPTPGVAA
Trigger: GGCTGCGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 72 bp AGAGCACCGGGGCTGTTCCAGAGTCACAATGTCAGCTaGCAGCATGACTCACTAGCTCCAAGTGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: RAPGLFQSHNVS*QHDSLAPSVCV
Trigger: GACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTGACTCTGGAACAGCCCCGGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 72 bp GGAGGTGGTAGACAGGGGGCGTCAAGGGGAGAAATGTaGACCTCTGGAAGACGAAGTCATAAGCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: GGGRQGASRGEM*TSGRRSHKQSS
Trigger: AGAGCTCTGCTTATGACTTCGTCTTCCAGAGGTCCACATTTCTCCCCTTGACGCCCCCTGTCTACCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp CTCAACCATAGCTTACGAACATCACTGACGCTGCAGTaGTCCGACTCCAGGAGTCGCAGCCCACAAGATACG +
Preference number: 3 (lower is better)
Translates to: LNHSLRTSLTLQ*SDSRSRSPQDT
Trigger: CGTATCTTGTGGGCTGCGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTGTAATCCTCGCACTTaGGGAGGCGGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTCNPRT*GGGGGW
Trigger: CCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTACA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGTGATCCTTGAAAGCTaGACTCAAGCTATGAAACAC +
Preference number: 3 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRVILES*TQAMKH
Trigger: GTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCAC...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 72 bp TGTGGCGCTCGGTTAATGGTAAAAATAGACAATGTGTaGGGCGGGACCGCTCCTCCTCATCCTCCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: CGARLMVKIDNV*GGTAPPHPPKL
Trigger: GAGCTTGGGAGGATGAGGAGGAGCGGTCCCGCCTCACACATTGTCTATTTTTACCATTAACCGAGCGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 72 bp ACAACTGGTACAAGGCCCAGCTGCAGTGTCCCTAAGTaGCATGGTTACAAGAGAAGCCCTGGCCCACCTTGT +
Preference number: 3 (lower is better)
Translates to: TTGTRPSCSVPK*HGYKRSPGPPC
Trigger: ACAAGGTGGGCCAGGGCTTCTCTTGTAACCATGTCACTTAGGGACACTGCAGCTGGGCCTTGTACCAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTCTCTGGCTGCGGAGTaGGAGCCTCGGAGGAATTCC +
Preference number: 3 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTSLAAE*EPRRNS
Trigger: GGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCAGAGGGCTACTTCCATaGCGACTCCCACAGAGACAG +
Preference number: 3 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTRGLLP*RLPQRQ
Trigger: CTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTCT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR TCA 72 bp GGGGCTGTTCCAGAGTCACAATGTCAGCTGCCAGCATaGCTCACTAGCTCCAAGTGTGTGTGTCTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: GAVPESQCQLPA*LTSSKCVCLFV
Trigger: CACAAACAGACACACACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACATTGTGACTCTGGAACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAAGAGATGGGATCCTTaGCATGAGGAGCTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRKRWDP*HEELLL
Trigger: CAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCTT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGTCACTTCTGCTGGAATaGCTTGACTCTATAGAAAGA +
Preference number: 3 (lower is better)
Translates to: EVISRALPAEAREQLLWLSLLLE*LDSIER
Trigger: TCTTTCTATAGAGTCAAGCAATTCCAGCAGAAGTGA...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACCTGTGCGCTGGGACTTaGTCCTTTGCTAGTCACAGA +
Preference number: 3 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDLCAGT*SFASHR
Trigger: TCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAG...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCAAGAGATGGGATCCTTaGCATGAGGAGCTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTKRWDP*HEELLL
Trigger: CAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCTT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGCCAAGATCGAGCCATaGCACTCCAGCCTGGATGAC +
Preference number: 3 (lower is better)
Translates to: GCTMHKGAVILESLTQAMAKIEP*HSSLDD
Trigger: GTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGGC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACTGGGACTTTGTCCTTaGCTAGTCACAGAAGTAAGG +
Preference number: 3 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRLGLCP*LVTEVR
Trigger: CCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp TCATTTCCTGGTGAAGTGACATTAGGTAGGACTGTTTaGGTGCCTGTGCAGGGCAGAGCCAACTCACGCTTA +
Preference number: 3 (lower is better)
Translates to: SFPGEVTLGRTV*VPVQGRANSRL
Trigger: TAAGCGTGAGTTGGCTCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAATGTCACTTCACCAGGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp CACGGCAGGGATAGATCACAGCATACGGAACGGGACTaGTTCCATCCAAAGAGTGAACCACAATGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: HGRDRSQHTERD*FHPKSEPQCFW
Trigger: CCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATCTCTGGCTGCGGAGTaGGAGCCTCGGAGGAATTCC +
Preference number: 3 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKSLAAE*EPRRNS
Trigger: GGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACAAGGAAACGCAAAGTaGCCCCGAGGAGGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKQGNAK*PRGGGP
Trigger: AGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp AGGGCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTaGTGCTATAGAAGTATGAGCAAGCTAGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: RASESHGTGKDL*CYRSMSKLAAS
Trigger: GGAAGCAGCTAGCTTGCTCATACTTCTATAGCACCACAGATCCTTCCCAGTACCATGGCTTTCACTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCACCCCTGCAGGCCGTaGCCTATGCTGGAGATGGGG +
Preference number: 3 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTHPCRP*PMLEMG
Trigger: CCCCATCTCCAGCATAGGCAACGGCCTGCAGGGGTG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGGCTGGGTCCCAGGTTaGGCTAGTGGGAAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFGWVPG*ASGKKQ
Trigger: TTGCTTCTTCCCACTAGCCAAACCTGGGACCCAGCC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGGGCAGCCCACTGGCATaGCAGGACAGAGTAACAAAG +
Preference number: 3 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSGSPLA*QDRVTK
Trigger: CTTTGTTACTCTGTCCTGCAATGCCAGTGGGCTGCC...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR TCA 72 bp AATCTGGGTGAAAACACAAATGAATGCTTGTTCAACTaGCTAGAAGACTCGGGACTCCGAGCCGCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: NLGENTNECLFN*LEDSGLRAASA
Trigger: TGCAGAGGCGGCTCGGAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTCATTTGTGTTTTCACCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR GCA 72 bp GGGACTTTGTCCTTTGCTAGTCACAGAAGTAAGGGATaGAGCTATCCCCCTCCAGAGCTAACTGCATTTAAG +
Preference number: 3 (lower is better)
Translates to: GTLSFASHRSKG*SYPPPELTAFK
Trigger: CTTAAATGCAGTTAGCTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTGACTAGCAAAGGACAAAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp GCAAGTGAAAGCCATGGTACTGGGAAGGATCTGTGGTaGTATAGAAGTATGAGCAAGCTAGCTGCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: ASESHGTGKDLW*YRSMSKLAASR
Trigger: TCTGGAAGCAGCTAGCTTGCTCATACTTCTATAGCACCACAGATCCTTCCCAGTACCATGGCTTTCACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 72 bp GGGCCACACCCGATGCAAAAGACTTTGCTGGCTTTCTaGTCAGACAAGCCTAGAGATGTGTATTTTCTTAGG +
Preference number: 3 (lower is better)
Translates to: GPHPMQKTLLAF*SDKPRDVYFLR
Trigger: CCTAAGAAAATACACATCTCTAGGCTTGTCTGACCAGAAAGCCAGCAAAGTCTTTTGCATCGGGTGTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTGTAATCCTCGCACTTaGGGAGGCGGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTCNPRT*GGGGGW
Trigger: CCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTACA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGGCTCACTGAGTGACTaGGGGATTTTAATGCCAACT +
Preference number: 3 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTGSLSD*GILMPT
Trigger: AGTTGGCATTAAAATCCCCAAGTCACTCAGTGAGCC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACAGAGCTTGCACCAGCTaGGGACAGGACGAAGTACAC +
Preference number: 3 (lower is better)
Translates to: SSVWKTLVLFPAILSILHRACTS*GQDEVH
Trigger: GTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTCT...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGATCTGAGAATACACTATaGAAAGACCATTTTCCACCT +
Preference number: 3 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRSENTL*KDHFPP
Trigger: AGGTGGAAAATGGTCTTTCAATAGTGTATTCTCAGA...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCTGGGACTTTGTCCTTaGCTAGTCACAGAAGTAAGG +
Preference number: 3 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTLGLCP*LVTEVR
Trigger: CCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACTGTGCGCTGGGACTTaGTCCTTTGCTAGTCACAGA +
Preference number: 3 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKLCAGT*SFASHR
Trigger: TCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCGGCTCACTGAGTGACTaGGGGATTTTAATGCCAACT +
Preference number: 3 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTGSLSD*GILMPT
Trigger: AGTTGGCATTAAAATCCCCAAGTCACTCAGTGAGCC...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGTCAAGCCCTCAGGTCTaGATAACTGTGATTTTCGGG +
Preference number: 3 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSSSPQV*ITVIFG
Trigger: CCCGAAAATCACAGTTATCAAGACCTGAGGGCTTGA...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR TCA 72 bp GAGATCTGTGGCATGATCAGCCCAAGATGGATGCATTaGGTCTTCATAGACTCATTCGACAAAAACACCCAG +
Preference number: 3 (lower is better)
Translates to: EICGMISPRWMH*VFIDSFDKNTQ
Trigger: CTGGGTGTTTTTGTCGAATGAGTCTATGAAGACTCAATGCATCCATCTTGGGCTGATCATGCCACAGATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp AACACTTCAAAAGGTTTAGAACATTGCAATGTAACTTaGACCCTGGCAGCACCTGTCACCAGACTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: NTSKGLEHCNVT*TLAAPVTRLSV
Trigger: CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGAAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp CCAAAGAGTGAACCACAATGCTTTTGGAAAGCAGTATaGAAAAATGGGAGGAGCCCAGATTATGGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PKSEPQCFWKAV*KNGRSPDYGSR
Trigger: TCTGGAGCCATAATCTGGGCTCCTCCCATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 72 bp ACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTaGACCACAATGCTTTTGGAAAGCAGTATGGAAAAA +
Preference number: 3 (lower is better)
Translates to: TAYGTGLVPSKE*TTMLLESSMEK
Trigger: TTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp GCTTTTGCTAAGAACACTTCAAAAGGTTTAGAACATTaGAATGTAACTTGCACCCTGGCAGCACCTGTCACC +
Preference number: 3 (lower is better)
Translates to: AFAKNTSKGLEH*NVTCTLAAPVT
Trigger: GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGAAGTGTTCTTAGCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CCA 72 bp GTATACTATAGGCACGGACATCTGGAATGTAGAACTTaGGTCTACAGCATCCCTAATATCCGACTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: VYYRHGHLECRT*VYSIPNIRLGN
Trigger: ATTCCCTAGTCGGATATTAGGGATGCTGTAGACCCAAGTTCTACATTCCAGATGTCCGTGCCTATAGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR TCA 72 bp AAAGGGATGCACAATGCACAAAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTATGAAACACACTTACAT +
Preference number: 3 (lower is better)
Translates to: KGMHNAQRSSDP*KLDSSYETHLH
Trigger: ATGTAAGTGTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACGTAATTATAACTGGCTaGAATCCACCGTCTCCTTAT +
Preference number: 3 (lower is better)
Translates to: SSVWKTLVLFPAILSILHVIITG*NPPSPY
Trigger: ATAAGGAGACGGTGGATTCAAGCCAGTTATAATTAC...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
3UTR-3UTR CAA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCTCTGAGAATACACTATaGAAAGACCATTTTCCACCT +
Preference number: 3 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFSENTL*KDHFPP
Trigger: AGGTGGAAAATGGTCTTTCAATAGTGTATTCTCAGA...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CCA 72 bp AAGTGTGTGTGTCTGTTTGTGTGTGTGTCTGTAATCTaGGTGAAAACACAAATGAATGCTTGTTCAACTGAC +
Preference number: 3 (lower is better)
Translates to: KCVCLFVCVSVI*VKTQMNACSTD
Trigger: GTCAGTTGAACAAGCATTCATTTGTGTTTTCACCCAGATTACAGACACACACACAAACAGACACACACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTGTGATCCTTGAAAGCTaGACTCAAGCTATGAAACAC +
Preference number: 3 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTVILES*TQAMKH
Trigger: GTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCAC...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTCACTTCTGCTGGAATaGCTTGACTCTATAGAAAGA +
Preference number: 3 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSLLLE*LDSIER
Trigger: TCTTTCTATAGAGTCAAGCAATTCCAGCAGAAGTGA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR GCA 72 bp GAATTACATTCACTACATTCTACTGGAAGTAACTCTTaGATAGTGACCCAGCTTAAACAAGCACATTTTCAC +
Preference number: 3 (lower is better)
Translates to: ELHSLHSTGSNS*IVTQLKQAHFH
Trigger: GTGAAAATGTGCTTGTTTAAGCTGGGTCACTATGCAAGAGTTACTTCCAGTAGAATGTAGTGAATGTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 72 bp CCTACCCACCTCCCTTCCCTCCAAGGAAACGCAAAGTaGCCCCGAGGAGGTGGGCCTGCCTCCACATCGCCC +
Preference number: 4 (lower is better)
Translates to: PTHLPSLQGNAK*PRGGGPASTSP
Trigger: GGGCGATGTGGAGGCAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTGGAGGGAAGGGAGGTGGGTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGAGCCTCCAGACCTCCTaGGCTGCAGCCGGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRSLQTS*AAAGSE
Trigger: TTCCGAGCCGGCTGCAGCGCAGGAGGTCTGGAGGCT...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531738.6
CDS-3UTR GCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCCAGACCTCCTGCGCTaGAGCCGGCTCGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLPDLLR*SRLGKP
Trigger: TGGCTTTCCGAGCCGGCTGCAGCGCAGGAGGTCTGG...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTTTCCCGCCCCCAGGCTaGGGGAGCTGGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCFPPPG*GSWPTE
Trigger: CTCTGTGGGCCAGCTCCCCCAGCCTGGGGGCGGGAA...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGTAATCCTCGCACTTTaGGAGGCGGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRVILAL*EAEAGG
Trigger: TCCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTAC...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 72 bp CGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCGGAGTaGGAGCCTCGGAGGAATTCCACGGCAGGGATAGAT +
Preference number: 4 (lower is better)
Translates to: RGGQRAASLAAE*EPRRNSTAGID
Trigger: ATCTATCCCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTCTGGCCTCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCCCAGGCTGGGGGAGCTaGCCCACAGAGCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTPGWGS*PTEHRG
Trigger: GCCCCGGTGCTCTGTGGGCCAGCTCCCCCAGCCTGG...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGGCTCTTCATAGGCCTTaGAACACCAACCACCACCCC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRALHRP*NTNHHP
Trigger: GGGGTGGTGGTTGGTGTTTCAAGGCCTATGAAGAGC...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGATTCCCATCATGCCTaGACTCACGCTCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLDSHHA*THAPLT
Trigger: GGTGAGGGGAGCGTGAGTGCAGGCATGATGGGAATC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCCAGTTGCTTCCTGGTaGAATGTCCTGCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRPVASW*NVLPVL
Trigger: AAGGACGGGCAGGACATTGCACCAGGAAGCAACTGG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTGGAGAACCCCCGTTTaGCCGAGGAATCCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRWRTPV*PRNPSD
Trigger: GTCACTTGGATTCCTCGGGCAAACGGGGGTTCTCCA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCCCAGTCTTCACAACTaGTACAAGGCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRPSLHN*YKAQLQ
Trigger: CTGCAGCTGGGCCTTGTACCAGTTGTGAAGACTGGG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGACAGGCACCTTCACGTaGCTGAGGGGCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLTGTFT*LRGFIS
Trigger: GGAAATGAAGCCCCTCAGTCACGTGAAGGTGCCTGT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGCACTCCAGCCTGGATaGCAGCAAGACTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLALQPG*QQDSIS
Trigger: TGAGATGGAGTCTTGCTGTCATCCAGGCTGGAGTGC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCCTGGTGCAATGTCCTaGCCGTCCTTTAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRPGAMS*PSFSQY
Trigger: GTATTGGCTAAAGGACGGGCAGGACATTGCACCAGG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTCACAAAGTAAGCATTaGTGGGCAGCCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRSQSKH*WAAHHP
Trigger: AGGATGGTGGGCTGCCCATCAATGCTTACTTTGTGA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGCACCTTCACGTGACTaGGGGGCTTCATTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLAPSRD*GASFPN
Trigger: GTTTGGAAATGAAGCCCCTCAGTCACGTGAAGGTGC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGAAGGAGATCGTGAAATaGTACAGTGGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLKEIVK*YSGSGA
Trigger: TGCCCCGCTCCCACTGTATCATTTCACGATCTCCTT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGATCCTGAGGATAAGGTaGTACCACAGGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLILRIR*YHRDHR
Trigger: CCTGTGGTCCCTGTGGTAGCACCTTATCCTCAGGAT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGCTAGTTTCGGCGTCATaGCACCATAAGCGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLLVSAS*HHKRVP
Trigger: AGGGACACGCTTATGGTGCCATGACGCCGAAACTAG...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCGTGAAATGATACAGTaGGAGCGGGGCAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRREMIQ*ERGSLC
Trigger: GCATAAACTGCCCCGCTCCCACTGTATCATTTCACG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCACTCTCCGCGGGGCTaGCTAAGCCTCCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVHSPRG*LSLQTS
Trigger: GGAGGTCTGGAGGCTTAGCCAGCCCCGCGGAGAGTG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531738.6
CDS-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGATAAGGACGAGATGCTaGACTCCGAAAACTCTCACC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRIRTRC*TPKTLT
Trigger: GGTGAGAGTTTTCGGAGTTCAGCATCTCGTCCTTAT...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGTGCAGTGTCCCTAAGTaGCATGGTTACAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRCSVPK*HGYKRS
Trigger: GCTTCTCTTGTAACCATGTCACTTAGGGACACTGCA...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRLGGGG*SEPRSS
Trigger: GCTCGATCTTGGCTCACTGCAACCTCCGCCTCCCAG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGTACAAGACAATTAGCTaGACGTGGTGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLYKTIS*TWWQVP
Trigger: AGGCACCTGCCACCACGTCCAGCTAATTGTCTTGTA...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTGCTGGGTCCCAGGTTTaGCTAGTGGGAAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCAGSQV*LVGRSK
Trigger: CTTGCTTCTTCCCACTAGCCAAACCTGGGACCCAGC...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTCTTAGGGAGGGCAGGTaGGATTTGGGAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCLREGR*DLGRAL
Trigger: AAGGGCTCTTCCCAAATCCCACCTGCCCTCCCTAAG...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAAGGAGATCGTGAAATaGTACAGTGGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCKEIVK*YSGSGA
Trigger: TGCCCCGCTCCCACTGTATCATTTCACGATCTCCTT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAAAATAGACAATGTGTaGGGCGGGACCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCKIDNV*GGTAPP
Trigger: AGGAGGAGCGGTCCCGCCTCACACATTGTCTATTTT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGCCAGCTTCCCAGCATaGCAACCCCATCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRASFPA*QPHHPA
Trigger: AGCTGGATGATGGGGTTGGCATGCTGGGAAGCTGGC...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCTGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVLGGGG*SEPRSS
Trigger: GCTCGATCTTGGCTCACTGCAACCTCCGCCTCCCAG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACTCTGGCTGCGGAGTTaGAGCCTCGGAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRLWLRS*SLGGIP
Trigger: TGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 72 bp AGAGCTGATGTTCACGCCAATAGAGGGCTACTTCCATaGCGACTCCCACAGAGACAGGCTGATGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RADVHANRGLLP*RLPQRQADGWV
Trigger: GACCCAGCCATCAGCCTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTCTATTGGCGTGAACATCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTTCCACATTGTCCTTaGCGCTCTCCTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRVPHCP*RSPPAT
Trigger: AGTTGCCGGAGGAGAGCGTCAAGGACAATGTGGAAC...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTATGGGATCCTTTGCATaGGGAGCTCTTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCMGSFA*GALAVT
Trigger: AGTGACAGCAAGAGCTCCTCATGCAAAGGATCCCAT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGCTGTCTACGGACAATaGCTCCCCAGTTTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLAVYGQ*LPSFLK
Trigger: TTTTAGAAAACTGGGGAGTCATTGTCCGTAGACAGC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAGAACAGAGGGGTGTaGACAGGGGAGTTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVQNRGV*TGEFQG
Trigger: CCCCTGAAACTCCCCTGTGCACACCCCTCTGTTCTG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGACGGAGCAGAGGTACTaGAGATGTAGCTTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVTEQRY*RCSFPP
Trigger: GGGCGGGAAGCTACATCTGCAGTACCTCTGCTCCGT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGTAATCCTCGCACTTTaGGAGGCGGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTVILAL*EAEAGG
Trigger: TCCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTAC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGGGGCTGGGTTCCCATaGACGTCGCAGGTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTGAGFP*TSQVKC
Trigger: ACACTTTACCTGCGACGTTCATGGGAACCCAGCCCC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGCTCCTTCAGGGCCTTaGTCTCTGCAGTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVAPSGP*SLQSEQ
Trigger: CTGTTCTGACTGCAGAGATCAAGGCCCTGAAGGAGC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTGAATGCTTGTTCAACTaGCTAGAAGACTCGGGACTC +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCECLFN*LEDSGL
Trigger: GAGTCCCGAGTCTTCTAGTCAGTTGAACAAGCATTC...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCCAGTTGCTTCCTGGTaGAATGTCCTGCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVPVASW*NVLPVL
Trigger: AAGGACGGGCAGGACATTGCACCAGGAAGCAACTGG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGGGACTCGAACCGTGTaGCAGCTTCCCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTGTRTV*QLPSMP
Trigger: TGGCATGCTGGGAAGCTGGCACACGGTTCGAGTCCC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACCAAGATCGAGCCATTaGACTCCAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRPRSSH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGAAGAGTGAACCACAATaGTTTTGGAAAGCAGTATGG +
Preference number: 4 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRKSEPQ*FWKAVW
Trigger: CCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTT...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACGAGGGCTACTTCCATTaGGACTCCCACAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDEGYFH*DSHRDR
Trigger: CCTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTC...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAACAATTAGCTGGACGTaGTGGCAGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRTISWT*WQVPVV
Trigger: GACTACAGGCACCTGCCACCACGTCCAGCTAATTGT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGGGAATAGCCACTGCTaGGACCGCCATTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTGNSHC*DRHWLG
Trigger: TCCTAACCAATGGCGGTCTCAGCAGTGGCTATTCCC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAGACCATTTTCCACCTaGAAACCCAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRRPFST*KPSWWQ
Trigger: TTGCCACCAGCTGGGTTTTCAGGTGGAAAATGGTCT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGCACTCCAGCCTGGATaGCAGCAAGACTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTALQPG*QQDSIS
Trigger: TGAGATGGAGTCTTGCTGTCATCCAGGCTGGAGTGC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAAAGTAAGTCTTTTCTaGCACTCACCCCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRKVSLF*HSPLQA
Trigger: GGCCTGCAGGGGTGAGTGTCAGAAAAGACTTACTTT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTGTCAGCTGCCAGCATaGCTCACTAGCTCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDCQLPA*LTSSKC
Trigger: ACACTTGGAGCTAGTGAGTCATGCTGGCAGCTGACA...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGTGTCTGAGGGCAAGTaGAAGCCATGGTACTGGGAA +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVVSEGK*KPWYWE
Trigger: TTCCCAGTACCATGGCTTTCACTTGCCCTCAGACAC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGGATCTCTGGGTGTCTaGGGGCAAGTGAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTGSLGV*GQVKAM
Trigger: CATGGCTTTCACTTGCCCTCAGACACCCAGAGATCC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGCCAGCTTCCCAGCATaGCAACCCCATCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTASFPA*QPHHPA
Trigger: AGCTGGATGATGGGGTTGGCATGCTGGGAAGCTGGC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGGGACTCGAACCGTGTaGCAGCTTCCCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMGTRTV*QLPSMP
Trigger: TGGCATGCTGGGAAGCTGGCACACGGTTCGAGTCCC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGAGGTTGGCCTTCACCTaGTGCGCTTCTTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVRLAFT*CASCYH
Trigger: ATGGTAGCAAGAAGCGCAGCAGGTGAAGGCCAACCT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGCAGGCCGTTGCCTATaGTGGAGATGGGGGATGACT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTAGRCL*WRWGMT
Trigger: AGTCATCCCCCATCTCCAGCATAGGCAACGGCCTGC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAGCAGCTTCTCTGGCTaGGGAGTTGGAGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMSSFSG*GVGASE
Trigger: CTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACACAGGGCCTTGATCTCTaGAGTCAGAACAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTQGLDL*SQNRGV
Trigger: CACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTG...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAAGGAAACGCAAAGTTaGCCCGAGGAGGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTKETQS*PEEVGL
Trigger: CAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGAAACCAGGTACAGTTaGGGGCTGGGTTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVETRYS*GLGSHE
Trigger: TTCATGGGAACCCAGCCCCCAACTGTACCTGGTTTC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGGAGCTTGCACCAGCTTaGGACAGGACGAAGTACACA +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVELAPA*DRTKYT
Trigger: TGTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTC...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCTGCCTATGCTGGAGATaGGGGATGACTAGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTCLCWR*GMTSFG
Trigger: GCCGAAACTAGTCATCCCCCATCTCCAGCATAGGCA...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCCACCACCCCAGGTTTaGATCCTGCACAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVPPPQV*ILHKKP
Trigger: TGGTTTCTTGTGCAGGATCCAAACCTGGGGTGGTGG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGATCTGTGTATGCAATGTaGGGTCCAGTTATTGGACGG +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRSVYAM*GPVIGR
Trigger: CCGTCCAATAACTGGACCTCACATTGCATACACAGA...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGGGAATAGCCACTGCTaGGACCGCCATTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTGNSHC*DRHWLG
Trigger: TCCTAACCAATGGCGGTCTCAGCAGTGGCTATTCCC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGAGTTCAAAACCAGCCTaGAACCTTGTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLSSKPA*NLVSNK
Trigger: TTTATTAGAGACAAGGTTTCAGGCTGGTTTTGAACT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGCTGGAGATGGGGGATaGCTAGTTTCGGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMAGDGG*LVSASW
Trigger: CCATGACGCCGAAACTAGTCATCCCCCATCTCCAGC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCGCTGGAGATGGGGGATaGCTAGTTTCGGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTAGDGG*LVSASW
Trigger: CCATGACGCCGAAACTAGTCATCCCCCATCTCCAGC...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAGGGGCTATGCTATATaGAAGCAGCCTTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCRGYAI*KQPSLL
Trigger: TAAAAGAGAAGGCTGCTTTCATATAGCATAGCCCCT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGATGCAGGAGACACAGATaGGAAGAAACGGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRCRRHR*EETARK
Trigger: CTTTCTTGCCGTTTCTTCTCATCTGTGTCTCCTGCA...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGCTTACGAACATCACTaGCGCTGCAGTGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTAYEHH*RCSGPT
Trigger: AGTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAAGGTTGGCCTTCACCTaGTGCGCTTCTTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTRLAFT*CASCYH
Trigger: ATGGTAGCAAGAAGCGCAGCAGGTGAAGGCCAACCT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAGAGATGGGATCCTTTaGATGAGGAGCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRRDGIL*MRSSCC
Trigger: ACAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCCCCAGGTTTGGATCCTaGACAAGAAACCACGGATTC +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTPRFGS*TRNHGF
Trigger: GAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGG...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGAGCTTGCACCAGCTTaGGACAGGACGAAGTACACA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTELAPA*DRTKYT
Trigger: TGTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCCAGTTATTGGACGGCTaGAAAAGCGATTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTQLLDG*KSDWGT
Trigger: GGTTCCCCAATCGCTTTTCCAGCCGTCCAATAACTG...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAGTTATTGGACGGCTaGAAAAGCGATTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVQLLDG*KSDWGT
Trigger: GGTTCCCCAATCGCTTTTCCAGCCGTCCAATAACTG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGTAGAGATATCCTGGTaGGTCATATTTTTGTATGGT +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLVEISW*VIFLYG
Trigger: ACCATACAAAAATATGACCCACCAGGATATCTCTAC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGTTCCACTGCGATTTCTaGGAAACTAACATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLFHCDF*ETNISS
Trigger: TGAAGAAATGTTAGTTTCCCAGAAATCGCAGTGGAA...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTCTGGAATGTAGAACTTaGGTCTACAGCATCCCTAAT +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCLECRT*VYSIPN
Trigger: ATTAGGGATGCTGTAGACCCAAGTTCTACATTCCAG...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGTTTCCTAAATCAAAATaGCTGTCTACGGACAATGAC +
Preference number: 4 (lower is better)
Translates to: EVISRALPAEAREQLLWLFPKSK*LSTDND
Trigger: GTCATTGTCCGTAGACAGCCATTTTGATTTAGGAAA...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAACCGAGCACAGTGCCTaGTACACAGTAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRTEHSA*YTVVIQ
Trigger: CTGAATAACTACTGTGTACCAGGCACTGTGCTCGGT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACATACGGAACGGGACTaGTTCCATCCAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRHTERD*FHPKSE
Trigger: TTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGCCAGCACAAGGGACGTaGCGCCTGAAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMPAQGT*RLKGDR
Trigger: TCTGTCTCCTTTCAGGCGCCACGTCCCTTGTGCTGG...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATAAGGACGAGATGCTaGACTCCGAAAACTCTCACC +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTIRTRC*TPKTLT
Trigger: GGTGAGAGTTTTCGGAGTTCAGCATCTCGTCCTTAT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAACGTCCATAACACTATaGCTAGTGCCTAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRTSITL*LVPSKL
Trigger: CAGTTTGCTAGGCACTAGTCATAGTGTTATGGACGT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACAGAGATGGGATCCTTTaGATGAGGAGCTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDRDGIL*MRSSCC
Trigger: ACAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCT...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGGGAAGGATCTGTGGTaGTATAGAAGTATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRGKDLW*YRSMSK
Trigger: CTTGCTCATACTTCTATAGCACCACAGATCCTTCCC...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAATGCCTGTGAATGGGTaGGGTGAAGAATGTGAACAT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRMPVNG*GEECEH
Trigger: ATGTTCACATTCTTCACCCCACCCATTCACAGGCAT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGAAACCAGGTACAGTTaGGGGCTGGGTTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTETRYS*GLGSHE
Trigger: TTCATGGGAACCCAGCCCCCAACTGTACCTGGTTTC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGATGGTAGGCCGATCTaGTGCCTCTGGAACTCCACT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMDGRPI*CLWNST
Trigger: AGTGGAGTTCCAGAGGCACCAGATCGGCCTACCATC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCATACGGAACGGGACTaGTTCCATCCAAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVHTERD*FHPKSE
Trigger: TTCACTCTTTGGATGGAACCAGTCCCGTTCCGTATG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTCAAGGGGAGAAATGTaGACCTCTGGAAGACGAAGT +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVSRGEM*TSGRRS
Trigger: ACTTCGTCTTCCAGAGGTCCACATTTCTCCCCTTGA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCTCACTGACGCTGCAGTaGTCCGACTCCAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFSLTLQ*SDSRSR
Trigger: GCGACTCCTGGAGTCGGACCACTGCAGCGTCAGTGA...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAGACAGGCTGATGGCTaGGTCCCAGGTTTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMRQADG*VPGLAS
Trigger: ACTAGCCAAACCTGGGACCCAGCCATCAGCCTGTCT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAGGGGCTGGGTTCCCATaGACGTCGCAGGTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKGAGFP*TSQVKC
Trigger: ACACTTTACCTGCGACGTTCATGGGAACCCAGCCCC...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGCACCTTCACGTGACTaGGGGGCTTCATTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMAPSRD*GASFPN
Trigger: GTTTGGAAATGAAGCCCCTCAGTCACGTGAAGGTGC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAACAGGCACCTTCACGTaGCTGAGGGGCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLTGTFT*LRGFIS
Trigger: GGAAATGAAGCCCCTCAGTCACGTGAAGGTGCCTGT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAGTTCCACATTGTCCTTaGCGCTCTCCTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLVPHCP*RSPPAT
Trigger: AGTTGCCGGAGGAGAGCGTCAAGGACAATGTGGAAC...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGACGTCCATAACACTATaGCTAGTGCCTAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVTSITL*LVPSKL
Trigger: CAGTTTGCTAGGCACTAGTCATAGTGTTATGGACGT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGTTCCATCCAAAGAGTaGACCACAATGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRVPSKE*TTMLLE
Trigger: TTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAAC...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACGGAGATTCCCATCATaGCTGCACTCACGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKRRFPS*LHSRSP
Trigger: AGGGGAGCGTGAGTGCAGGCATGATGGGAATCTCCG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACATCCGTCTGCAACCTTTaGACTTACTGGTGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSVCNL*TYWCRN
Trigger: ATTACGGCACCAGTAAGTGCAAAGGTTGCAGACGGA...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCATCCTGAGGATAAGGTaGTACCACAGGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTILRIR*YHRDHR
Trigger: CCTGTGGTCCCTGTGGTAGCACCTTATCCTCAGGAT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCACAGAAGTAAGGGATaGAGCTATCCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTHRSKG*SYPPPE
Trigger: CTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCAAGGAAACGCAAAGTTaGCCCGAGGAGGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFKETQS*PEEVGL
Trigger: CAGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTT...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGGTACAGTTGGGGGCTaGGTTCCCATGAACGTCGCA +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFGTVGG*VPMNVA
Trigger: TGCGACGTTCATGGGAACCCAGCCCCCAACTGTACC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAATCCACGTGTGTCCTaGTTAGAGAGTTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTNPRVS*LESCCA
Trigger: GGCACAGCAACTCTCTAACCAGGACACACGTGGATT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGCTAGTTTCGGCGTCATaGCACCATAAGCGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMLVSAS*HHKRVP
Trigger: AGGGACACGCTTATGGTGCCATGACGCCGAAACTAG...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGTGCCTATGCTGGAGATaGGGGATGACTAGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMCLCWR*GMTSFG
Trigger: GCCGAAACTAGTCATCCCCCATCTCCAGCATAGGCA...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAGGCCGTTGCCTATGCTaGAGATGGGGGATGACTAGT +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLGRCLC*RWGMTS
Trigger: ACTAGTCATCCCCCATCTCCAGCATAGGCAACGGCC...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGTTAGGTAGGACTGTTTaGGTGCCTGTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMLGRTV*VPVQGR
Trigger: TCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAA...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGAGCAGTATGGAAAAATaGGAGGAGCCCAGATTATGG +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVSSMEK*EEPRLW
Trigger: CCATAATCTGGGCTCCTCCCATTTTTCCATACTGCT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACTCTGGCTGCGGAGTTaGAGCCTCGGAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKLWLRS*SLGGIP
Trigger: TGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACATCAAGGGGAGAAATGTaGACCTCTGGAAGACGAAGT +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSRGEM*TSGRRS
Trigger: ACTTCGTCTTCCAGAGGTCCACATTTCTCCCCTTGA...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCACTTTGCTGGCTTTCTaGTCAGACAAGCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTTLLAF*SDKPRD
Trigger: ATCTCTAGGCTTGTCTGACCAGAAAGCCAGCAAAGT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGCCCGAGGAATCCAAGTaGCATAGACTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMPEESK*HRLMSL
Trigger: CAGAGACATCAGTCTATGTCACTTGGATTCCTCGGG...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGATGGGATCCTTTGCATaGGGAGCTCTTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMMGSFA*GALAVT
Trigger: AGTGACAGCAAGAGCTCCTCATGCAAAGGATCCCAT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATTAAAAGGAGATCGTaGAATGATACAGTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTIKRRS*NDTVGA
Trigger: CGCTCCCACTGTATCATTTCACGATCTCCTTTTAAT...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAGCTCCTTCAGGGCCTTaGTCTCTGCAGTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKAPSGP*SLQSEQ
Trigger: CTGTTCTGACTGCAGAGATCAAGGCCCTGAAGGAGC...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTCACAATGGCACCGATaGTATTGTTGGCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTSQWHR*YCWQGT
Trigger: AGTGCCTTGCCAACAATAGCATCGGTGCCATTGTGA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAATGGAGAACCCCCGTTTaGCCGAGGAATCCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKWRTPV*PRNPSD
Trigger: GTCACTTGGATTCCTCGGGCAAACGGGGGTTCTCCA...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTCTTTCCCCAAAGGGATaGACAATGCACAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTLSPKG*TMHKGA
Trigger: TGCTCCTTTGTGCATTGTGCATCCCTTTGGGGAAAG...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTCACCTTCAGGGGCTATaGTATATGAAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTHLQGL*YMKAAF
Trigger: GAAGGCTGCTTTCATATAGCATAGCCCCTGAAGGTG...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACAGGGCCTTGATCTCTaGAGTCAGAACAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKQGLDL*SQNRGV
Trigger: CACCCCTCTGTTCTGACTGCAGAGATCAAGGCCCTG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAAGGGCCACACCCGATaGAAAAGACTTTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTKGHTR*KRLCWL
Trigger: AAGCCAGCAAAGTCTTTTGCATCGGGTGTGGCCCTT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAATAGGCACGGACATCTaGAATGTAGAACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTIGTDI*NVELGS
Trigger: AGACCCAAGTTCTACATTCCAGATGTCCGTGCCTAT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTATAAACTTCACTTCTTaGCAGTACTATAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCINFTS*QYYSWN
Trigger: ATTCCAGCTATAGTACTGCCAAGAAGTGAAGTTTAT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACCCACCGGCCAGCCTGTaGAATGTTCCAGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SSVWKTLVLFPAILSILHPPASL*NVPAIF
Trigger: GAAAATGGCTGGAACATTCCACAGGCTGGCCGGTGG...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACCCGAGGAATCCAAGTaGCATAGACTGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLPEESK*HRLMSL
Trigger: CAGAGACATCAGTCTATGTCACTTGGATTCCTCGGG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTACTACGAACTTCCACTaGAAGTTTGGAAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTTTNFH*KFGRRD
Trigger: ATCCCTCCTTCCAAACTTTCAGTGGAAGTTCGTAGT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGTCTGTGTATGCAATGTaGGGTCCAGTTATTGGACGG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMSVYAM*GPVIGR
Trigger: CCGTCCAATAACTGGACCTCACATTGCATACACAGA...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTATTGATCATGCCTTCCTaGCCTCTGCTGAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLLIMPS*PLLNSA
Trigger: AGCAGAGTTCAGCAGAGGTCAGGAAGGCATGATCAA...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTRSSDP*KLDSSY
Trigger: ATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGTTCCATCCAAAGAGTaGACCACAATGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTVPSKE*TTMLLE
Trigger: TTCCAAAAGCATTGTGGTTCACTCTTTGGATGGAAC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAATGAGATCTGTGGCATaGTCAGCCCAAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLMRSVA*SAQDGC
Trigger: GCATCCATCTTGGGCTGATCATGCCACAGATCTCAT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAAGGGGCTATGCTATATaGAAGCAGCCTTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: APWQHLSPDCQCKTERKTRGYAI*KQPSLL
Trigger: TAAAAGAGAAGGCTGCTTTCATATAGCATAGCCCCT...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAAAATAGACAATGTGTaGGGCGGGACCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKKIDNV*GGTAPP
Trigger: AGGAGGAGCGGTCCCGCCTCACACATTGTCTATTTT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGACTCCTGGCTTCAAGTaGTCTTCCTGCCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSTPGFK*SSCLNF
Trigger: GAAGTTGAGGCAGGAAGATCACTTGAAGCCAGGAGT...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR GCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACCTGGTGCAATGTCCTaGCCGTCCTTTAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSPGAMS*PSFSQY
Trigger: GTATTGGCTAAAGGACGGGCAGGACATTGCACCAGG...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR GCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTATCACTCGTGCCCACGTaGAGATACAAAGTCAACAGG +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLSLVPT*RYKVNR
Trigger: CCTGTTGACTTTGTATCTGCACGTGGGCACGAGTGA...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTCCTTTTCTGCATACTaGCGTAATTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVSFSAY*RNSSRP
Trigger: AGGTCTTGATGAATTACGGCAGTATGCAGAAAAGGA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCCACAGAAGTAAGGGATaGAGCTATCCCCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFHRSKG*SYPPPE
Trigger: CTCTGGAGGGGGATAGCTGCATCCCTTACTTCTGTG...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCTGTTTTCATATTCTGTaGGCTGGGACTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTCFHIL*AGTLSF
Trigger: AAAGGACAAAGTCCCAGCGCACAGAATATGAAAACA...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTGTTTTCATATTCTGTaGGCTGGGACTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVCFHIL*AGTLSF
Trigger: AAAGGACAAAGTCCCAGCGCACAGAATATGAAAACA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAGCAGCTTCTCTGGCTaGGGAGTTGGAGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSSFSG*GVGASE
Trigger: CTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACATTGCAATGTAACTTaGACCCTGGCAGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLHCNVT*TLAAPV
Trigger: GACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCCACCTTCAGGGGCTATaGTATATGAAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTHLQGL*YMKAAF
Trigger: GAAGGCTGCTTTCATATAGCATAGCCCCTGAAGGTG...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGCAAAACCCAGTCCTTaGTTCACAAGTCACGGAGAT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMAKPSP*FTSHGD
Trigger: ATCTCCGTGACTTGTGAACCAAGGACTGGGTTTTGC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGTGAGGTCCAGTTATTaGACGGCTGGAAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMVRSSY*TAGKAI
Trigger: AATCGCTTTTCCAGCCGTCCAATAACTGGACCTCAC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGCTAATCCAACAGACTaGAGAGCTCCCGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFANPTD*RAPAKT
Trigger: TGTCTTGGCGGGAGCTCTCCAGTCTGTTGGATTAGC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGATTCCACTGCGATTTCTaGGAAACTAACATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRFHCDF*ETNISS
Trigger: TGAAGAAATGTTAGTTTCCCAGAAATCGCAGTGGAA...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTATTACAAGAGAAGCCCTaGCCCACCTTGTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLLQEKP*PTLWKT
Trigger: TGTCTTCCACAAGGTGGGCCAGGGCTTCTCTTGTAA...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CAA 72 bp CACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTaGTCCTTTGCTAGTCACAGAAGTAAGGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: HRVCFHILCAGT*SFASHRSKGCS
Trigger: GCTGCATCCCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAATGTGAACATCATCTaGAGAAGGACGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTNVNII*RRTTHK
Trigger: CTTGTGAGTCGTCCTTCTTCAGATGATGTTCACATT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCACTACGAACTTCCACTaGAAGTTTGGAAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTTTNFH*KFGRRD
Trigger: ATCCCTCCTTCCAAACTTTCAGTGGAAGTTCGTAGT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGGAGCAGTGATCCTTaGAAGCTTGACTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTRSSDP*KLDSSY
Trigger: ATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCCCATGGCTCACTGAGTaGCTTGGGGATTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFPWLTE*LGDFNA
Trigger: GGCATTAAAATCCCCAAGTCACTCAGTGAGCCATGG...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAATGAGATCTGTGGCATaGTCAGCCCAAGATGGATGC +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKMRSVA*SAQDGC
Trigger: GCATCCATCTTGGGCTGATCATGCCACAGATCTCAT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCTCACTCGTGCCCACGTaGAGATACAAAGTCAACAGG +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFSLVPT*RYKVNR
Trigger: CCTGTTGACTTTGTATCTGCACGTGGGCACGAGTGA...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACTTTCCCCAAAGGGATaGACAATGCACAAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLLSPKG*TMHKGA
Trigger: TGCTCCTTTGTGCATTGTGCATCCCTTTGGGGAAAG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGAAAGGTTTAGAACATTaGAATGTAACTTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVKGLEH*NVTCTL
Trigger: CAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTT...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAAGGGCCACACCCGATaGAAAAGACTTTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKKGHTR*KRLCWL
Trigger: AAGCCAGCAAAGTCTTTTGCATCGGGTGTGGCCCTT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAGGTGTGTGTTCCTTTaGTCAACCATAGCTTACGAA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTRCVFL*STIAYE
Trigger: TTCGTAAGCTATGGTTGAGCAAAGGAACACACACCT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCGTAGAGATATCCTGGTaGGTCATATTTTTGTATGGT +
Preference number: 4 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTVEISW*VIFLYG
Trigger: ACCATACAAAAATATGACCCACCAGGATATCTCTAC...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGCAGTATGGAAAAATaGGAGGAGCCCAGATTATGG +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTSSMEK*EEPRLW
Trigger: CCATAATCTGGGCTCCTCCCATTTTTCCATACTGCT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAGAACCACAATGCTTTTaGAAAGCAGTATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQREPQCF*KAVWKN
Trigger: ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTC...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCCGTGAAATGATACAGTaGGAGCGGGGCAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFREMIQ*ERGSLC
Trigger: GCATAAACTGCCCCGCTCCCACTGTATCATTTCACG...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CCA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAATAAACTTCACTTCTTaGCAGTACTATAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRINFTS*QYYSWN
Trigger: ATTCCAGCTATAGTACTGCCAAGAAGTGAAGTTTAT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCACTTTGCTGGCTTTCTaGTCAGACAAGCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTTLLAF*SDKPRD
Trigger: ATCTCTAGGCTTGTCTGACCAGAAAGCCAGCAAAGT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCACTGGGAAGGATCTGTaGTGCTATAGAAGTATGAGC +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTTGKDL*CYRSMS
Trigger: GCTCATACTTCTATAGCACCACAGATCCTTCCCAGT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
3UTR CAA 72 bp TATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTaGCTAGTCACAGAAGTAAGGGATGCAGCTATCCCC +
Preference number: 4 (lower is better)
Translates to: YVFIFCALGLCP*LVTEVRDAAIP
Trigger: GGGGATAGCTGCATCCCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
3UTR CAA 72 bp GAACACTTCAAAAGGTTTAGAACATTGCAATGTAACTaGCACCCTGGCAGCACCTGTCACCAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: EHFKRFRTLQCN*HPGSTCHQTVS
Trigger: ACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGAAGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGATTAAAAGGAGATCGTaGAATGATACAGTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMIKRRS*NDTVGA
Trigger: CGCTCCCACTGTATCATTTCACGATCTCCTTTTAAT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAATGTTTTTCCGTTATaGAGCCATGAGATACGAGTG +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTNVFPL*SHEIRV
Trigger: CACTCGTATCTCATGGCTGCATAACGGAAAAACATT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCATCCGTCTGCAACCTTTaGACTTACTGGTGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSSVCNL*TYWCRN
Trigger: ATTACGGCACCAGTAAGTGCAAAGGTTGCAGACGGA...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR GCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAAGTCACAATGTCAGCTaGCAGCATGACTCACTAGCT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKSHNVS*QHDSLA
Trigger: AGCTAGTGAGTCATGCTGGCAGCTGACATTGTGACT...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR GCA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACTCAACTTCCCAAAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSLNFPK*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTTTGGGAAGTTGAG...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAATGCCTGTGAATGGGTaGGGTGAAGAATGTGAACAT +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLMPVNG*GEECEH
Trigger: ATGTTCACATTCTTCACCCCACCCATTCACAGGCAT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTGATGGTAGGCCGATCTaGTGCCTCTGGAACTCCACT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTDGRPI*CLWNST
Trigger: AGTGGAGTTCCAGAGGCACCAGATCGGCCTACCATC...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGCTGGAATGTAGAACTTaGGTCTACAGCATCCCTAAT +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMLECRT*VYSIPN
Trigger: ATTAGGGATGCTGTAGACCCAAGTTCTACATTCCAG...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAGGGCAGGTGGGATTTaGGAAGAGCCCTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTRAGGI*EEPFCQ
Trigger: CTGACAGAAGGGCTCTTCCCAAATCCCACCTGCCCT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAAATGTGAACATCATCTaGAGAAGGACGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLNVNII*RRTTHK
Trigger: CTTGTGAGTCGTCCTTCTTCAGATGATGTTCACATT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGAATGTGAACATCATCTaGAGAAGGACGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSNVNII*RRTTHK
Trigger: CTTGTGAGTCGTCCTTCTTCAGATGATGTTCACATT...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACATTCACAATTCCATTaGCTGCATTGGGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLHSQFH*LHWGPY
Trigger: ATAAGGTCCCCAATGCAGTCAATGGAATTGTGAATG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTTCTGCTGGAATTGCTTaGCTCTATAGAAAGAGAATA +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTSAGIA*LYRKRI
Trigger: TATTCTCTTTCTATAGAGTCAAGCAATTCCAGCAGA...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACCAAGATGGATGCATTaGGTCTTCATAGACTCATTC +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLPRWMH*VFIDSF
Trigger: GAATGAGTCTATGAAGACTCAATGCATCCATCTTGG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCCTGGTGCAATGTCCTaGCCGTCCTTTAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTPGAMS*PSFSQY
Trigger: GTATTGGCTAAAGGACGGGCAGGACATTGCACCAGG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTCCTTTTCTGCATACTaGCGTAATTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTSFSAY*RNSSRP
Trigger: AGGTCTTGATGAATTACGGCAGTATGCAGAAAAGGA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGACTGGAAGTAACTCTTaGATAGTGACCCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMTGSNS*IVTQLK
Trigger: TTTAAGCTGGGTCACTATGCAAGAGTTACTTCCAGT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCACTGGAAGTAACTCTTaGATAGTGACCCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTTGSNS*IVTQLK
Trigger: TTTAAGCTGGGTCACTATGCAAGAGTTACTTCCAGT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAAGAGTGAACCACAATaGTTTTGGAAAGCAGTATGG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMKSEPQ*FWKAVW
Trigger: CCATACTGCTTTCCAAAAGCATTGTGGTTCACTCTT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTACAATTAGCTGGACGTaGTGGCAGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTTISWT*WQVPVV
Trigger: GACTACAGGCACCTGCCACCACGTCCAGCTAATTGT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTTAGGTAGGACTGTTTaGGTGCCTGTGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTLGRTV*VPVQGR
Trigger: TCTGCCCTGCACAGGCACCCAAACAGTCCTACCTAA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTCACAAAGTAAGCATTaGTGGGCAGCCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSQSKH*WAAHHP
Trigger: AGGATGGTGGGCTGCCCATCAATGCTTACTTTGTGA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACATTCACAATTCCATTaGCTGCATTGGGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKHSQFH*LHWGPY
Trigger: ATAAGGTCCCCAATGCAGTCAATGGAATTGTGAATG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAGACCATTTTCCACCTaGAAACCCAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTRPFST*KPSWWQ
Trigger: TTGCCACCAGCTGGGTTTTCAGGTGGAAAATGGTCT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR TCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTTTAAAAGCAGTTCATaGCCTAAGGCTCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTFKSSS*PKAHAN
Trigger: ATTAGCATGAGCCTTAGGTCATGAACTGCTTTTAAA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAAAGGTTTAGAACATTaGAATGTAACTTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GCTMHKGAVILESLTQAMKGLEH*NVTCTL
Trigger: CAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTGGCTGGAAAAGCGATTaGGGAACCCAACCACTTGAT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTGWKSD*GTQPLD
Trigger: ATCAAGTGGTTGGGTTCCCCAATCGCTTTTCCAGCC...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAATCCACGTGTGTCCTaGTTAGAGAGTTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTNPRVS*LESCCA
Trigger: GGCACAGCAACTCTCTAACCAGGACACACGTGGATT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCATTTTCTCTTCCTCGTaGACAGATCCCATATTCAAA +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTIFSSS*TDPIFK
Trigger: TTTGAATATGGGATCTGTCCACGAGGAAGAGAAAAT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGAACCACAATGCTTTTaGAAAGCAGTATGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTEPQCF*KAVWKN
Trigger: ATTTTTCCATACTGCTTTCCAAAAGCATTGTGGTTC...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACAATGTTTTTCCGTTATaGAGCCATGAGATACGAGTG +
Preference number: 4 (lower is better)
Translates to: SSVWKTLVLFPAILSILHNVFPL*SHEIRV
Trigger: CACTCGTATCTCATGGCTGCATAACGGAAAAACATT...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR GCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTCCGTCTGCAACCTTTaGACTTACTGGTGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTSVCNL*TYWCRN
Trigger: ATTACGGCACCAGTAAGTGCAAAGGTTGCAGACGGA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTGTGAGGTCCAGTTATTaGACGGCTGGAAAAGCGATT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTVRSSY*TAGKAI
Trigger: AATCGCTTTTCCAGCCGTCCAATAACTGGACCTCAC...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAAAGTTCATAAACATGTaGCGCTCGGTTAATGGTAAA +
Preference number: 4 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLKFINM*RSVNGK
Trigger: TTTACCATTAACCGAGCGCCACATGTTTATGAACTT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTGTGTGTCTGTAATCTaGGTGAAAACACAAATGAAT +
Preference number: 4 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTCVSVI*VKTQMN
Trigger: ATTCATTTGTGTTTTCACCCAGATTACAGACACACA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTGCTGTCTACGGACAATaGCTCCCCAGTTTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTAVYGQ*LPSFLK
Trigger: TTTTAGAAAACTGGGGAGTCATTGTCCGTAGACAGC...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACTCTTGTTCTGTTTCCTaGCATTCTTTCGATACTTCA +
Preference number: 4 (lower is better)
Translates to: SSVWKTLVLFPAILSILHSCSVS*HSFDTS
Trigger: TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGA...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACACAAACTCATCAGTCTaGAAGACTCTTGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSVWKTLVLFPAILSILHTNSSV*KTLVLF
Trigger: AAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGT...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CCA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGCCTAGAATTCCAATTTaGGGGGAAATTATACTTCAT +
Preference number: 4 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSPRIPI*GEIILH
Trigger: ATGAAGTATAATTTCCCCCCAAATTGGAATTCTAGG...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCCAAGATGGATGCATTaGGTCTTCATAGACTCATTC +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTPRWMH*VFIDSF
Trigger: GAATGAGTCTATGAAGACTCAATGCATCCATCTTGG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR GCA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACATACTTCATTCTCAGTaGTTTCCTAGGATTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSVWKTLVLFPAILSILHILHSQ*FPRIGK
Trigger: TTTACCAATCCTAGGAAAGCACTGAGAATGAAGTAT...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR TCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTTTAAAAGCAGTTCATaGCCTAAGGCTCATGCTAAT +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTFKSSS*PKAHAN
Trigger: ATTAGCATGAGCCTTAGGTCATGAACTGCTTTTAAA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTTTTCCTAAATCAAAATaGCTGTCTACGGACAATGAC +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTFPKSK*LSTDND
Trigger: GTCATTGTCCGTAGACAGCCATTTTGATTTAGGAAA...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CCA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTAAGTTCATAAACATGTaGCGCTCGGTTAATGGTAAA +
Preference number: 4 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTKFINM*RSVNGK
Trigger: TTTACCATTAACCGAGCGCCACATGTTTATGAACTT...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCAAGGAAACGCAAAGTaGCCCCGAGGAGGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRQGNAK*PRGGGP
Trigger: AGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGCAGGTGGAGACCACATaGTCTTCTCAGCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRQVETT*SSQHSP
Trigger: AGGGCTGTGCTGAGAAGACAATGTGGTCTCCACCTG...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS GCA 90 bp TCAGTGCACACAAGGAAACTGAAGGAAGTGCCAGAAAGGGAGAGATaGAAGAGACGTGGTGTAGGCAGGGGCCAGCCAGGTCAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SVHTRKLKEVPERER*KRRGVGRGQPGQVG
Trigger: CCCCACCTGACCTGGCTGGCCCCTGCCTACACCACGTCTCTTGCATCTCTCCCTTTCTGGCACTTCCTTCAGTTTCCTTGTGTGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS-3UTR CAA 90 bp GAGAGCAGCTTCTCTGGCTGCGGAGTTGGAGCCTCGGAGGAATTCCACGGCAGGAGCAAAACCCAGTCCTaGGTTCACAAGTCACGGAGA +
Preference number: 5 (lower is better)
Translates to: ESSFSGCGVGASEEFHGRSKTQS*VHKSRR
Trigger: TCTCCGTGACTTGTGAACCAAGGACTGGGTTTTGCT...CCTGCCGTGGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGAAGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGACATTGCAATGTAACTaGCACCCTGGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: EVISRALPAEAREQLLWLTLQCN*HPGSTC
Trigger: ACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGT...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTCACCCCTGCAGGCCGTaGCCTATGCTGGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTHPCRP*PMLEMG
Trigger: CCCCATCTCCAGCATAGGCAACGGCCTGCAGGGGTG...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS TCA 90 bp TTCCTAGACACACTCCAGGGAGAGGACGCCATGCTGGAGCAGTCTTaGGTCCATCAGGTACAGAAACAGGGCTGCGTTATCCTCATCGGT +
Preference number: 5 (lower is better)
Translates to: FLDTLQGEDAMLEQS*VHQVQKQGCVILIG
Trigger: ACCGATGAGGATAACGCAGCCCTGTTTCTGTACCTGATGGACTCAAGACTGCTCCAGCATGGCGTCCTCTCCCTGGAGTGTGTCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS GCA 90 bp GGAGAGCTTGCCAAGGCTGGATTAGGTGTCCCTCCTTTCCTTAGCTaGCCACATTACTGTGTGCTCTCGCCCAGGTGTGTAGTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: GELAKAGLGVPPFLS*PHYCVLSPRCVVSV
Trigger: TACTGAGACTACACACCTGGGCGAGAGCACACAGTAATGTGGGCAGCTAAGGAAAGGAGGGACACCTAATCCAGCCTTGGCAAGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS-3UTR CAA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAAGAGATGGGATCCTTaGCATGAGGAGCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCKRWDP*HEELLL
Trigger: CAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCTT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCGCCAAGATCGAGCCATaGCACTCCAGCCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTAKIEP*HSSLDD
Trigger: GTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGGC...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCGGCTGGGTCCCAGGTTaGGCTAGTGGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTGWVPG*ASGKKQ
Trigger: TTGCTTCTTCCCACTAGCCAAACCTGGGACCCAGCC...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAAGAGGGCTACTTCCATaGCGACTCCCACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRRGLLP*RLPQRQ
Trigger: CTGTCTCTGTGGGAGTCGCAATGGAAGTAGCCCTCT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTTCAAGCCCTCAGGTCTaGATAACTGTGATTTTCGGG +
Preference number: 5 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCSSPQV*ITVIFG
Trigger: CCCGAAAATCACAGTTATCAAGACCTGAGGGCTTGA...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAGGTGGAGACCACATaGTCTTCTCAGCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVQVETT*SSQHSP
Trigger: AGGGCTGTGCTGAGAAGACAATGTGGTCTCCACCTG...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACAGCCAAGATCGAGCCATaGCACTCCAGCCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: APWQHLSPDCQCKTERKTAKIEP*HSSLDD
Trigger: GTCATCCAGGCTGGAGTGCAATGGCTCGATCTTGGC...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GAAGTCATAAGCAGAGCTCTGCCCGCGGAGGCCAGAGAGCAGCTTCTCTGGCTGGTGATCCTTGAAAGCTaGACTCAAGCTATGAAACAC +
Preference number: 5 (lower is better)
Translates to: EVISRALPAEAREQLLWLVILES*TQAMKH
Trigger: GTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCAC...CAGCCAGAGAAGCTGCTCTCTGGCCTCCGCGGGCAGAGCTCTGCTTATGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTCAAGGAAACGCAAAGTaGCCCCGAGGAGGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTQGNAK*PRGGGP
Trigger: AGGCCCACCTCCTCGGGGCAACTTTGCGTTTCCTTG...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp AGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTAAGCCCTGGCCCACCTaGTGGAAGACAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RFRTLQCNLHPGSTCHQTKPWPT*WKTEVA
Trigger: TGCCACCTCTGTCTTCCACAAGGTGGGCCAGGGCTT...AGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS TCA 90 bp AATCAGGGACTGCGGAAGTCAGGCATACAGGCACCTTCACGTGACTaGGGGGCTTCATTTCCAAACCATCCTGAGGATAAGGTGCTACCA +
Preference number: 5 (lower is better)
Translates to: NQGLRKSGIQAPSRD*GASFPNHPEDKVLP
Trigger: TGGTAGCACCTTATCCTCAGGATGGTTTGGAAATGAAGCCCCTCAGTCACGTGAAGGTGCCTGTATGCCTGACTTCCGCAGTCCCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263577.11
ENST00000392693.7
ENST00000531738.6
ENST00000680589.1
ENST00000683597.1
ENST00000683716.1
ENST00000683981.1
ENST00000684078.1
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTATGTAATCCTCGCACTTaGGGAGGCGGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLCNPRT*GGGGGW
Trigger: CCACCCGCCTCCGCCTCCCAAAGTGCGAGGATTACA...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAACACCCCTGCAGGCCGTaGCCTATGCTGGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKHPCRP*PMLEMG
Trigger: CCCCATCTCCAGCATAGGCAACGGCCTGCAGGGGTG...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTCTCTGGCTGCGGAGTaGGAGCCTCGGAGGAATTCC +
Preference number: 5 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTSLAAE*EPRRNS
Trigger: GGAATTCCTCCGAGGCTCCAACTCCGCAGCCAGAGA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGAACATTGCAATGTAACTaGCACCCTGGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRTLQCN*HPGSTC
Trigger: ACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGT...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTGCTCCTTCAGGGCCTaGATCTCTGCAGTCAGAACA +
Preference number: 5 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDCSFRA*ISAVRT
Trigger: TGTTCTGACTGCAGAGATCAAGGCCCTGAAGGAGCA...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTGCTCCTTCAGGGCCTaGATCTCTGCAGTCAGAACA +
Preference number: 5 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVCSFRA*ISAVRT
Trigger: TGTTCTGACTGCAGAGATCAAGGCCCTGAAGGAGCA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GTTCCTTTGCTCAACCATAGCTTACGAACATCACTGACGCTGCAGTGGTCCGACTGTGAGGTCCAGTTATaGGACGGCTGGAAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: VPLLNHSLRTSLTLQWSDCEVQL*DGWKSD
Trigger: ATCGCTTTTCCAGCCGTCCAATAACTGGACCTCACA...GTCGGACCACTGCAGCGTCAGTGATGTTCGTAAGCTATGGTTGAGCAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGAGAGCTTGCACCAGCTaGGGACAGGACGAAGTACAC +
Preference number: 5 (lower is better)
Translates to: GCTMHKGAVILESLTQAMRACTS*GQDEVH
Trigger: GTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTCT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAGGCAGCCCACTGGCATaGCAGGACAGAGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLGSPLA*QDRVTK
Trigger: CTTTGTTACTCTGTCCTGCAATGCCAGTGGGCTGCC...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAAGAGCTTGCACCAGCTaGGGACAGGACGAAGTACAC +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLRACTS*GQDEVH
Trigger: GTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTCT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp TCCGACTCCAGGAGTCGCAGCCCACAAGATACGGAGCAGAGGTACTGCAGATGTAAAAGGTTTAGAACATaGCAATGTAACTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: SDSRSRSPQDTEQRYCRCKRFRT*QCNLHP
Trigger: AGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTT...ACATCTGCAGTACCTCTGCTCCGTATCTTGTGGGCTGCGACTCCTGGAGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGACCCAAGATGGATGCATaGAGTCTTCATAGACTCATT +
Preference number: 5 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRPKMDA*SLHRLI
Trigger: AATGAGTCTATGAAGACTCAATGCATCCATCTTGGG...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS TCA 90 bp AACAGGACATTTGGGACCAGCAAAAGGTACACTACCCAGAGCAACTaGCCAGTTACAAGAATGGCCTTAGCAAAGCTCCCAATTCCACTG +
Preference number: 5 (lower is better)
Translates to: NRTFGTSKRYTTQSN*PVTRMALAKLPIPL
Trigger: CAGTGGAATTGGGAGCTTTGCTAAGGCCATTCTTGTAACTGGTCAGTTGCTCTGGGTAGTGTACCTTTTGCTGGTCCCAAATGTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683026.1
ENST00000683981.1
CDS TCA 90 bp AATCCCTTCCAAGATGTCACTGAGAAGCGGGCATTCAGCTTCAATTaGGCACTTCCAACATTAGGGAGTTTACGACTTTGTGGGGGAACC +
Preference number: 5 (lower is better)
Translates to: NPFQDVTEKRAFSFN*ALPTLGSLRLCGGT
Trigger: GGTTCCCCCACAAAGTCGTAAACTCCCTAATGTTGGAAGTGCTCAATTGAAGCTGAATGCCCGCTTCTCAGTGACATCTTGGAAGGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS-3UTR CAA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCGGCAGCCCACTGGCATaGCAGGACAGAGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFGSPLA*QDRVTK
Trigger: CTTTGTTACTCTGTCCTGCAATGCCAGTGGGCTGCC...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp TCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCACGGCAGCCCACTGGCATaGCAGGACAGAGTAACAAAG +
Preference number: 5 (lower is better)
Translates to: SSVWKTLVLFPAILSILHGSPLA*QDRVTK
Trigger: CTTTGTTACTCTGTCCTGCAATGCCAGTGGGCTGCC...GTGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CAA 90 bp CTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGATACTTCAAGAGCTTGCACCAGCTaGGGACAGGACGAAGTACAC +
Preference number: 5 (lower is better)
Translates to: LISLEDSCSVSCHSFDTSRACTS*GQDEVH
Trigger: GTGTACTTCGTCCTGTCCCAAGCTGGTGCAAGCTCT...TGAAGTATCGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CAA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCTGTGAGGTCCAGTTATaGGACGGCTGGAAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTCEVQL*DGWKSD
Trigger: ATCGCTTTTCCAGCCGTCCAATAACTGGACCTCACA...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp TCAAAAGGTTTAGAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAAGAGATGGGATCCTTaGCATGAGGAGCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SKGLEHCNVTCTLAAPVTKRWDP*HEELLL
Trigger: CAGCAAGAGCTCCTCATGCAAAGGATCCCATCTCTT...GGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp ACCCCAGGTTTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCGTGATCCTTGAAAGCTaGACTCAAGCTATGAAACAC +
Preference number: 5 (lower is better)
Translates to: TPGLDPAQETTDSPVNVTVILES*TQAMKH
Trigger: GTGTTTCATAGCTTGAGTCAAGCTTTCAAGGATCAC...GGTGACATTCACTGGAGAATCCGTGGTTTCTTGTGCAGGATCCAAACCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp TCCACGGCAGGGATAGATCACAGCATACGGAACGGGACTGGTTCCATCCAAAGATCACTTCTGCTGGAATaGCTTGACTCTATAGAAAGA +
Preference number: 5 (lower is better)
Translates to: STAGIDHSIRNGTGSIQRSLLLE*LDSIER
Trigger: TCTTTCTATAGAGTCAAGCAATTCCAGCAGAAGTGA...TCTTTGGATGGAACCAGTCCCGTTCCGTATGCTGTGATCTATCCCTGCCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTACTGTGCGCTGGGACTTaGTCCTTTGCTAGTCACAGA +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLLCAGT*SFASHR
Trigger: TCTGTGACTAGCAAAGGACAAAGTCCCAGCGCACAG...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GAACATTGCAATGTAACTTGCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGTCACTTCTGCTGGAATaGCTTGACTCTATAGAAAGA +
Preference number: 5 (lower is better)
Translates to: EHCNVTCTLAAPVTRLSVSLLLE*LDSIER
Trigger: TCTTTCTATAGAGTCAAGCAATTCCAGCAGAAGTGA...CACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGCAAGTTACATTGCAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGCTGGGACTTTGTCCTTaGCTAGTCACAGAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: GCTMHKGAVILESLTQAMLGLCP*LVTEVR
Trigger: CCTTACTTCTGTGACTAGCAAAGGACAAAGTCCCAG...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCCGTCCCCTAAAACACTaGCCCAAGATCCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFRPLKH*PKILLL
Trigger: AAGGAGCAGGATCTTGGGCAAGTGTTTTAGGGGACG...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS GCA 90 bp ATATTGTACAACGAGGTTGGGGGTGAGGTTCCGAAGAATATTCCATaGGAAATGCTCTATGCCACCCAGAAAAATGGCCTAATTCAGCAG +
Preference number: 5 (lower is better)
Translates to: ILYNEVGGEVPKNIP*EMLYATQKNGLIQQ
Trigger: CTGCTGAATTAGGCCATTTTTCTGGGTGGCATAGAGCATTTCGCATGGAATATTCTTCGGAACCTCACCCCCAACCTCGTTGTACAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS CCA 90 bp AGTATTCTGCCCTCCTCAGCCTCCCAAAGTGTGAGTTACCATGCCTaGCCTGACATTTTCTCATCAGTACTCTGTCTTAGTTACTATTAC +
Preference number: 5 (lower is better)
Translates to: SILPSSASQSVSYHA*PDIFSSVLCLSYYY
Trigger: GTAATAGTAACTAAGACAGAGTACTGATGAGAAAATGTCAGGCCAGGCATGGTAACTCACACTTTGGGAGGCTGAGGAGGGCAGAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGACTTCCACTGAAAGTTaGGAAGGAGGGATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GCTMHKGAVILESLTQAMTSTES*EGGMSS
Trigger: TGAAGACATCCCTCCTTCCAAACTTTCAGTGGAAGT...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGCAGTCTGGAAGACTCTaGTTCTGTTTCCTGCCATTC +
Preference number: 5 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSQSGRL*FCFLPF
Trigger: GAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTG...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAACTTCCACTGAAAGTTaGGAAGGAGGGATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLTSTES*EGGMSS
Trigger: TGAAGACATCCCTCCTTCCAAACTTTCAGTGGAAGT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGGTGAAACACCTATTGTaGTTTCGACAATTTCGGCAG +
Preference number: 5 (lower is better)
Translates to: GCTMHKGAVILESLTQAMVKHLL*FRQFRQ
Trigger: CTGCCGAAATTGTCGAAACAACAATAGGTGTTTCAC...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GCACCCTGGCAGCACCTGTCACCAGACTGTCAGTGCAAAACTGAAAGAAAAACATCTGAGAATACACTATaGAAAGACCATTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: APWQHLSPDCQCKTERKTSENTL*KDHFPP
Trigger: AGGTGGAAAATGGTCTTTCAATAGTGTATTCTCAGA...TGTTTTTCTTTCAGTTTTGCACTGACAGTCTGGTGACAGGTGCTGCCAGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS TCA 90 bp GTAGTCTCAGTACACCTGCTTGTGGTCTCACTAAGCTACACACTTTaGGAGGGCAGAGGTGGTGTTTATTTTATTTACCATTACATCTCC +
Preference number: 5 (lower is better)
Translates to: VVSVHLLVVSLSYTL*EGRGGVYFIYHYIS
Trigger: GGAGATGTAATGGTAAATAAAATAAACACCACCTCTGCCCTCTCAAAGTGTGTAGCTTAGTGAGACCACAAGCAGGTGTACTGAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCGTCCCCTAAAACACTaGCCCAAGATCCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTRPLKH*PKILLL
Trigger: AAGGAGCAGGATCTTGGGCAAGTGTTTTAGGGGACG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS GCA 90 bp GACTTCCATGGACCTGTGACAATCTTTCATAAGCAGGGACACTTTTaGCAGATTAAATTAACTCTTCAAGCACCCTTAATCCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: DFHGPVTIFHKQGHF*QIKLTLQAPLIPCG
Trigger: TCCACAAGGGATTAAGGGTGCTTGAAGAGTTAATTTAATCTGGCAAAAGTGTCCCTGCTTATGAAAGATTGTCACAGGTCCATGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683981.1
CDS-3UTR CAA 90 bp AAGCTCTCAGGACTGGGGCTAGGGTTTAAGGAAGGCTTATTTAAATATGGGAAAGTGAAACACCTATTGTaGTTTCGACAATTTCGGCAG +
Preference number: 5 (lower is better)
Translates to: KLSGLGLGFKEGLFKYGKVKHLL*FRQFRQ
Trigger: CTGCCGAAATTGTCGAAACAACAATAGGTGTTTCAC...TTTCCCATATTTAAATAAGCCTTCCTTAAACCCTAGCCCCAGTCCTGAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp GGATGCACAATGCACAAAGGAGCAGTGATCCTTGAAAGCTTGACTCAAGCTATGTCTGAGAATACACTATaGAAAGACCATTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: GCTMHKGAVILESLTQAMSENTL*KDHFPP
Trigger: AGGTGGAAAATGGTCTTTCAATAGTGTATTCTCAGA...CATAGCTTGAGTCAAGCTTTCAAGGATCACTGCTCCTTTGTGCATTGTGCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS-3UTR CAA 90 bp CTGACAAACTCATCAGTCTGGAAGACTCTTGTTCTGTTTCCTGCCATTCTTTCGGTAATTATAACTGGCTaGAATCCACCGTCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: LTNSSVWKTLVLFPAILSVIITG*NPPSPY
Trigger: ATAAGGAGACGGTGGATTCAAGCCAGTTATAATTAC...CGAAAGAATGGCAGGAAACAGAACAAGAGTCTTCCAGACTGATGAGTTTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531830.2
CDS-3UTR CAA 90 bp CTGTCAGACTTTGGTCATAAAACCAACGTAGCTAAGACACCAACTACCACTTTCCGTTTATATTCGACTTaGAAGGCAGTGATTGGAGAA +
Preference number: 5 (lower is better)
Translates to: LSDFGHKTNVAKTPTTTFRLYST*KAVIGE
Trigger: TTCTCCAATCACTGCCTTCAAAGTCGAATATAAACG...GAAAGTGGTAGTTGGTGTCTTAGCTACGTTGGTTTTATGACCAAAGTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392693.7
CDS-3UTR CAA 90 bp GCTAACACAGGGTATGTTTTCATATTCTGTGCGCTGGGACTTTGTCCTTTGCTAAAAAGGTTTAGAACATaGCAATGTAACTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: ANTGYVFIFCALGLCPLLKRFRT*QCNLHP
Trigger: AGGGTGCAAGTTACATTGCAATGTTCTAAACCTTTT...TAGCAAAGGACAAAGTCCCAGCGCACAGAATATGAAAACATACCCTGTGTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS CCA 90 bp TCCGAAGAATATTCCATGCGAAATGCTCTATGCCACCCAGAAAAATaGCCTAATTCAGCAGTCCATTATAAAAATGAAACTTGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SEEYSMRNALCHPEK*PNSAVHYKNETCSG
Trigger: GCCAGAACAAGTTTCATTTTTATAATGGACTGCTGAATTAGGCCATTTTTCTGGGTGGCATAGAGCATTTCGCATGGAATATTCTTCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCCCAAGATGGATGCATaGAGTCTTCATAGACTCATT +
Preference number: 5 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTPKMDA*SLHRLI
Trigger: AATGAGTCTATGAAGACTCAATGCATCCATCTTGGG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS TCA 90 bp CATAAAGTATGCATACAGAAAAGTCTACATAACTGTACAGCTCAATaGATGTTCACAAGCTGGACATGCTCATGGTACCCATATCTAAGT +
Preference number: 5 (lower is better)
Translates to: HKVCIQKSLHNCTAQ*MFTSWTCSWYPYLS
Trigger: ACTTAGATATGGGTACCATGAGCATGTCCAGCTTGTGAACATTCATTGAGCTGTACAGTTATGTAGACTTTTCTGTATGCATACTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS-3UTR CAA 90 bp ATCCCTAATATCCGACTAGGGAATTACATTCACTACATTCTACTGGAAGTAACTCGTTTATATTCGACTTaGAAGGCAGTGATTGGAGAA +
Preference number: 5 (lower is better)
Translates to: IPNIRLGNYIHYILLEVTRLYST*KAVIGE
Trigger: TTCTCCAATCACTGCCTTCAAAGTCGAATATAAACG...AGTTACTTCCAGTAGAATGTAGTGAATGTAATTCCCTAGTCGGATATTAGGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392693.7
ENST00000531738.6
CDS GCA 90 bp AAAATGCACACACACTCTCTCATGTTGTGTGAAACCACTCATATGTaGACTACATACAAGGCTGCTCAAGAAACTGATAAAACTAATTAT +
Preference number: 5 (lower is better)
Translates to: KMHTHSLMLCETTHM*TTYKAAQETDKTNY
Trigger: ATAATTAGTTTTATCAGTTTCTTGAGCAGCCTTGTATGTAGTGCACATATGAGTGGTTTCACACAACATGAGAGAGTGTGTGTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525625.2
ENST00000682450.1
ENST00000682556.1
CDS GCA 72 bp GCCAAGGCTGGATTAGGTGTCCCTCCTTTCCTTAGCTaGCCACATTACTGTGTGCTCTCGCCCAGGTGTGTA +
Preference number: 6 (lower is better)
Translates to: AKAGLGVPPFLS*PHYCVLSPRCV
Trigger: TACACACCTGGGCGAGAGCACACAGTAATGTGGGCAGCTAAGGAAAGGAGGGACACCTAATCCAGCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS GCA 72 bp ACAAGGAAACTGAAGGAAGTGCCAGAAAGGGAGAGATaGAAGAGACGTGGTGTAGGCAGGGGCCAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: TRKLKEVPERER*KRRGVGRGQPG
Trigger: ACCTGGCTGGCCCCTGCCTACACCACGTCTCTTGCATCTCTCCCTTTCTGGCACTTCCTTCAGTTTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS GCA 72 bp CCTTGGTTCACAAGTCACGGAGATTCCCATCATGCCTaGACTCACGCTCCCCTCACCTTTCATTCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: PWFTSHGDSHHA*THAPLTFHSLG
Trigger: TCCAAGGGAATGAAAGGTGAGGGGAGCGTGAGTGCAGGCATGATGGGAATCTCCGTGACTTGTGAACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263577.11
ENST00000392693.7
CDS TCA 72 bp CTGCGGAAGTCAGGCATACAGGCACCTTCACGTGACTaGGGGGCTTCATTTCCAAACCATCCTGAGGATAAG +
Preference number: 6 (lower is better)
Translates to: LRKSGIQAPSRD*GASFPNHPEDK
Trigger: CTTATCCTCAGGATGGTTTGGAAATGAAGCCCCTCAGTCACGTGAAGGTGCCTGTATGCCTGACTTCCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000263577.11
ENST00000392693.7
ENST00000531738.6
ENST00000680589.1
ENST00000683597.1
ENST00000683716.1
ENST00000683981.1
ENST00000684078.1
CDS CCA 72 bp GAAAGACTCCTGGCTCTGCATCTGACCACTAATGTGTaGCCTCAAGCAAGTTACTGCCCTCCCAGACTCTGT +
Preference number: 6 (lower is better)
Translates to: ERLLALHLTTNV*PQASYCPPRLC
Trigger: ACAGAGTCTGGGAGGGCAGTAACTTGCTTGAGGCCACACATTAGTGGTCAGATGCAGAGCCAGGAGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680589.1
ENST00000684238.1
CDS CCA 72 bp TGTGAGGTCCAGTTATTGGACGGCTGGAAAAGCGATTaGGGAACCCAACCACTTGATAAGGACGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: CEVQLLDGWKSD*GTQPLDKDEML
Trigger: CAGCATCTCGTCCTTATCAAGTGGTTGGGTTCCCCAATCGCTTTTCCAGCCGTCCAATAACTGGACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000263577.11
ENST00000392693.7
ENST00000531738.6
ENST00000680589.1
ENST00000682796.1
ENST00000683416.1
ENST00000683716.1
ENST00000684078.1
ENST00000684238.1
ENST00000684636.1
CDS GCA 72 bp TTCTTTCTCCAAAGCGCCTTTACAGGGACTCCAGTGTaGCAGGGGACTTACCTTCTACAACATCCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: FFLQSAFTGTPV*QGTYLLQHPSC
Trigger: ACAAGAGGGATGTTGTAGAAGGTAAGTCCCCTGGCACACTGGAGTCCCTGTAAAGGCGCTTTGGAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CCA 72 bp CCCTCCTCAGCCTCCCAAAGTGTGAGTTACCATGCCTaGCCTGACATTTTCTCATCAGTACTCTGTCTTAGT +
Preference number: 6 (lower is better)
Translates to: PSSASQSVSYHA*PDIFSSVLCLS
Trigger: ACTAAGACAGAGTACTGATGAGAAAATGTCAGGCCAGGCATGGTAACTCACACTTTGGGAGGCTGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS TCA 72 bp TTTGGGACCAGCAAAAGGTACACTACCCAGAGCAACTaGCCAGTTACAAGAATGGCCTTAGCAAAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: FGTSKRYTTQSN*PVTRMALAKLP
Trigger: TGGGAGCTTTGCTAAGGCCATTCTTGTAACTGGTCAGTTGCTCTGGGTAGTGTACCTTTTGCTGGTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683026.1
ENST00000683981.1
CDS TCA 72 bp TTCCTCCCAAAGCAAGAATCCCTTCCAAGATGTCACTaGGAAGCGGGCATTCAGCTTCAATTGAGCACTTCC +
Preference number: 6 (lower is better)
Translates to: FLPKQESLPRCH*EAGIQLQLSTS
Trigger: GGAAGTGCTCAATTGAAGCTGAATGCCCGCTTCTCAGTGACATCTTGGAAGGGATTCTTGCTTTGGGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS GCA 72 bp AACGAGGTTGGGGGTGAGGTTCCGAAGAATATTCCATaGGAAATGCTCTATGCCACCCAGAAAAATGGCCTA +
Preference number: 6 (lower is better)
Translates to: NEVGGEVPKNIP*EMLYATQKNGL
Trigger: TAGGCCATTTTTCTGGGTGGCATAGAGCATTTCGCATGGAATATTCTTCGGAACCTCACCCCCAACCTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS CAA 72 bp CAATTCCAGAGCTCAGGCTTCAAATATGCGTCCTCTTaGGTGGTCCAACAAAGCCGGAGTTTCCCAGCAATA +
Preference number: 6 (lower is better)
Translates to: QFQSSGFKYASS*VVQQSRSFPAI
Trigger: TATTGCTGGGAAACTCCGGCTTTGTTGGACCACCAAAGAGGACGCATATTTGAAGCCTGAGCTCTGGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS CAA 72 bp TCTTACGCTGCTTTCTTGCAACTTCCCCTCCCCCAATaGACTCAGCTCCTCTTCCACATAACAGTCCGTAAA +
Preference number: 6 (lower is better)
Translates to: SYAAFLQLPLPQ*TQLLFHITVRK
Trigger: TTTACGGACTGTTATGTGGAAGAGGAGCTGAGTCAATTGGGGGAGGGGAAGTTGCAAGAAAGCAGCGTAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CAA 72 bp ATGCTACGTCAGAAAGTTCTTTCTTACGCTGCTTTCTaGCAACTTCCCCTCCCCCAATTGACTCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: MLRQKVLSYAAF*QLPLPQLTQLL
Trigger: GAGGAGCTGAGTCAATTGGGGGAGGGGAAGTTGCAAGAAAGCAGCGTAAGAAAGAACTTTCTGACGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CAA 90 bp TTCCTACAGCAATTCCAGAGCTCAGGCTTCAAATATGCGTCCTCTTaGGTGGTCCAACAAAGCCGGAGTTTCCCAGCAATAAGTCAGCTA +
Preference number: 6 (lower is better)
Translates to: FLQQFQSSGFKYASS*VVQQSRSFPAISQL
Trigger: TAGCTGACTTATTGCTGGGAAACTCCGGCTTTGTTGGACCACCAAAGAGGACGCATATTTGAAGCCTGAGCTCTGGAATTGCTGTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS TCA 72 bp AGCTCCCAATTCCACTGTCATGGATGCAACGTGAACTaGCATATGACCGAATGCCTGAATAAACTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSQFHCHGCNVN*HMTECLNKLLR
Trigger: CCTCAGCAGTTTATTCAGGCATTCGGTCATATGTCAGTTCACGTTGCATCCATGACAGTGGAATTGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683026.1
ENST00000683981.1
CDS TCA 72 bp GAGATTCCCTTGTTCTTTGTGGACTCCATTCATACATaGATTCAATACTGGCCACCTCACCACTGTAGGGGC +
Preference number: 6 (lower is better)
Translates to: EIPLFFVDSIHT*IQYWPPHHCRG
Trigger: GCCCCTACAGTGGTGAGGTGGCCAGTATTGAATTCATGTATGAATGGAGTCCACAAAGAACAAGGGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CCA 72 bp AGAATGGCCTTAGCAAAGCTCCCAATTCCACTGTCATaGATGCAACGTGAACTGACATATGACCGAATGCCT +
Preference number: 6 (lower is better)
Translates to: RMALAKLPIPLS*MQRELTYDRMP
Trigger: AGGCATTCGGTCATATGTCAGTTCACGTTGCATCCATGACAGTGGAATTGGGAGCTTTGCTAAGGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683026.1
ENST00000683981.1
CDS TCA 72 bp AAATGCCTACCTGTCACTAGCCAGGACCATGGAAAATaGACACCGTTCTTGTACGGTGCTAGGGTTATTTTC +
Preference number: 6 (lower is better)
Translates to: KCLPVTSQDHGK*TPFLYGARVIF
Trigger: GAAAATAACCCTAGCACCGTACAAGAACGGTGTTCATTTTCCATGGTCCTGGCTAGTGACAGGTAGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525625.2
ENST00000682450.1
ENST00000682556.1
CDS GCA 72 bp AAGCAATTCTCCTGCTTCAACCTCCCAAGTAGCTTGTaGGTGCCACCACATCCGGCTAATTCTTTGTATTTT +
Preference number: 6 (lower is better)
Translates to: KQFSCFNLPSSL*VPPHPANSLYF
Trigger: AAAATACAAAGAATTAGCCGGATGTGGTGGCACGCACAAGCTACTTGGGAGGTTGAAGCAGGAGAATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
CDS TCA 72 bp CAAGATGTCACTGAGAAGCGGGCATTCAGCTTCAATTaGGCACTTCCAACATTAGGGAGTTTACGACTTTGT +
Preference number: 6 (lower is better)
Translates to: QDVTEKRAFSFN*ALPTLGSLRLC
Trigger: ACAAAGTCGTAAACTCCCTAATGTTGGAAGTGCTCAATTGAAGCTGAATGCCCGCTTCTCAGTGACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS GCA 72 bp AATTCTCCTGCTTCAACCTCCCAAGTAGCTTGTGCGTaGCACCACATCCGGCTAATTCTTTGTATTTTTAGT +
Preference number: 6 (lower is better)
Translates to: NSPASTSQVACA*HHIRLILCIFS
Trigger: ACTAAAAATACAAAGAATTAGCCGGATGTGGTGGCACGCACAAGCTACTTGGGAGGTTGAAGCAGGAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
CDS CCA 72 bp GGGTTTGAGGAAACAAGGAGAGTTAAGTATTGCTGGTaGGAGTGTACACTGATAACGACTATGGAGAGTGAT +
Preference number: 6 (lower is better)
Translates to: GFEETRRVKYCW*ECTLITTMESD
Trigger: ATCACTCTCCATAGTCGTTATCAGTGTACACTCCCACCAGCAATACTTAACTCTCCTTGTTTCCTCAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682450.1
ENST00000682556.1
CDS CAA 72 bp AGTACACCTGCTTGTGGTCTCACTAAGCTACACACTTaGAGAGGGCAGAGGTGGTGTTTATTTTATTTACCA +
Preference number: 6 (lower is better)
Translates to: STPACGLTKLHT*RGQRWCLFYLP
Trigger: TGGTAAATAAAATAAACACCACCTCTGCCCTCTCAAAGTGTGTAGCTTAGTGAGACCACAAGCAGGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS CAA 90 bp TGTAGTCTCAGTACACCTGCTTGTGGTCTCACTAAGCTACACACTTaGAGAGGGCAGAGGTGGTGTTTATTTTATTTACCATTACATCTC +
Preference number: 6 (lower is better)
Translates to: CSLSTPACGLTKLHT*RGQRWCLFYLPLHL
Trigger: GAGATGTAATGGTAAATAAAATAAACACCACCTCTGCCCTCTCAAAGTGTGTAGCTTAGTGAGACCACAAGCAGGTGTACTGAGACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS TCA 72 bp CTGGTGGGAGTGTACACTGATAACGACTATGGAGAGTaGTTCAGTAATCTCTACCAAAATTACCAACACAGA +
Preference number: 6 (lower is better)
Translates to: LVGVYTDNDYGE*FSNLYQNYQHR
Trigger: TCTGTGTTGGTAATTTTGGTAGAGATTACTGAATCACTCTCCATAGTCGTTATCAGTGTACACTCCCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682450.1
ENST00000682556.1
CDS TCA 72 bp TGCATACAGAAAAGTCTACATAACTGTACAGCTCAATaGATGTTCACAAGCTGGACATGCTCATGGTACCCA +
Preference number: 6 (lower is better)
Translates to: CIQKSLHNCTAQ*MFTSWTCSWYP
Trigger: TGGGTACCATGAGCATGTCCAGCTTGTGAACATTCATTGAGCTGTACAGTTATGTAGACTTTTCTGTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS TCA 72 bp GAGAATAATTTCTATATTGTACAACGAGGTTGGGGGTaGGGTTCCGAAGAATATTCCATGCGAAATGCTCTA +
Preference number: 6 (lower is better)
Translates to: ENNFYIVQRGWG*GSEEYSMRNAL
Trigger: TAGAGCATTTCGCATGGAATATTCTTCGGAACCTCACCCCCAACCTCGTTGTACAATATAGAAATTATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682834.1
CDS GCA 72 bp ACACACTCTCTCATGTTGTGTGAAACCACTCATATGTaGACTACATACAAGGCTGCTCAAGAAACTGATAAA +
Preference number: 6 (lower is better)
Translates to: THSLMLCETTHM*TTYKAAQETDK
Trigger: TTTATCAGTTTCTTGAGCAGCCTTGTATGTAGTGCACATATGAGTGGTTTCACACAACATGAGAGAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525625.2
ENST00000682450.1
ENST00000682556.1
CDS TCA 72 bp TCTACATGCATTCCAATTTCTCAGCATCTCTACAAGTaGGCAAGATGCTTAAGACATCATCTTTCTAGGACA +
Preference number: 6 (lower is better)
Translates to: STCIPISQHLYK*ARCLRHHLSRT
Trigger: TGTCCTAGAAAGATGATGTCTTAAGCATCTTGCTCACTTGTAGAGATGCTGAGAAATTGGAATGCATGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CAA 72 bp ATAACAGTCCGTAAATACCTGAAGGTAGCTATCGTGTaGCTTCTGCTAGTCTTTTTCAACCTGAATATCGTT +
Preference number: 6 (lower is better)
Translates to: ITVRKYLKVAIV*LLLVFFNLNIV
Trigger: AACGATATTCAGGTTGAAAAAGACTAGCAGAAGCAACACGATAGCTACCTTCAGGTATTTACGGACTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CAA 90 bp AGCAATAAGTCAGCTATTTACTTAGAGACCTGCTTAGTTTTGGCTTaGGTGTTTATGTCTGCTGGGCAATTTAATTTGATGCTCCACTTA +
Preference number: 6 (lower is better)
Translates to: SNKSAIYLETCLVLA*VFMSAGQFNLMLHL
Trigger: TAAGTGGAGCATCAAATTAAATTGCCCAGCAGACATAAACACCAAAGCCAAAACTAAGCAGGTCTCTAAGTAAATAGCTGACTTATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS CCA 72 bp ATTTACCATTACATCTCCACTGTCCAGAACAGTGCCTaGTATACAGAAGACGATGATTATCTTTTGAATAAA +
Preference number: 6 (lower is better)
Translates to: IYHYISTVQNSA*YTEDDDYLLNK
Trigger: TTTATTCAAAAGATAATCATCGTCTTCTGTATACCAGGCACTGTTCTGGACAGTGGAGATGTAATGGTAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000682796.1
ENST00000683026.1
ENST00000684238.1
ENST00000684636.1
CDS CAA 72 bp GAACTACTACTGATTAATCATATTTCCCCCAAATGTTaGTACAAGTTTCTGCAACCAGAATATAAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: ELLLINHISPKC*YKFLQPEYKVL
Trigger: CAGCACCTTATATTCTGGTTGCAGAAACTTGTACAAACATTTGGGGGAAATATGATTAATCAGTAGTAGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683416.1
CDS CCA 72 bp CAAACTATATGCAGTATTTCATGTCAAGAAGTCATATaGAAAATAACCTTGGCCTATGGCAATTTTCTGACA +
Preference number: 6 (lower is better)
Translates to: QTICSISCQEVI*KITLAYGNFLT
Trigger: TGTCAGAAAATTGCCATAGGCCAAGGTTATTTTCCATATGACTTCTTGACATGAAATACTGCATATAGTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683416.1