Pregenerated sensors for CDO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000129596Ensembl transcript IDs: ENST00000250535.5, ENST00000502631.1, ENST00000504613.1, ENST00000504877.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATTCTTCTGCAGTAGCTaGGGGCACTATTTGCTTACT | + |
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Preference number: 2 (lower is better) Translates to: LPFINKWQSAVSSSIIHRFFCSS*GHYLLT Trigger: AGTAAGCAAATAGTGCCCTCAGCTACTGCAGAAGAA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATATTTCCAAAAGCTATaGAAACCCTCACTGACGCTC | + |
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Preference number: 2 (lower is better) Translates to: LPFINKWQSAVSSSIIHRYFQKL*KPSLTL Trigger: GAGCGTCAGTGAGGGTTTTCATAGCTTTTGGAAATA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCCACCCCCAGGCCCCTaGCAGCGCAGTGGATCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIPPPGP*QRSGSG Trigger: CCCGGATCCACTGCGCTGCCAGGGGCCTGGGGGTGG...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAATCGTGGGGAGCTGGCTaGGCGCGCGTCTCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKSWGAG*ARVSLL Trigger: CAGCAGTGAGACGCGCGCGCAGCCAGCTCCCCACGA...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAACGCGCGTCTCACTGCTaGGCTGCGGTGGAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKRASHC*AAVEEL Trigger: CAGCTCCTCCACCGCAGCCCAGCAGTGAGACGCGCG...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAGCGCGCGCGTCTCACTaGTGGGCTGCGGTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRARASH*WAAVEE Trigger: CTCCTCCACCGCAGCCCAGCAGTGAGACGCGCGCGC...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCCCCTGGCAGCGCAGTaGATCCGGGATCGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIPLAAQ*IRDRWR Trigger: TCTCCAGCGATCCCGGATCCACTGCGCTGCCAGGGG...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTGTCTCACTGCTGGGCTaGGGTGGAGGAGCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIVSLLG*GGGAER Trigger: TCGCTCAGCTCCTCCACCGCAGCCCAGCAGTGAGAC...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAATGGATCCGGGATCGCTaGAGACGCGGTGCACACACA | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKWIRDR*RRGAHT Trigger: TGTGTGTGCACCGCGTCTCCAGCGATCCCGGATCCA...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTAGCGAGCCAAGGAGCTaGGGGCGAGGGAGCCTAACA | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIISEPRS*GRGSLT Trigger: TGTTAGGCTCCCTCGCCCCCAGCTCCTTGGCTCGCT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACATCTCGTGGGGAGCTaGCTGCGCGCGCGTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRHLVGS*LRARLT Trigger: AGTGAGACGCGCGCGCAGCCAGCTCCCCACGAGATG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAGTCTGTTCCATCTCGTaGGGAGCTGGCTGCGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRVCSIS*GAGCAR Trigger: GCGCGCGCAGCCAGCTCCCCACGAGATGGAACAGAC...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAGAACTTGGCGTACATTaGCCACTCGGTGGGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKELGVH*PLGGVA Trigger: AGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTC...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTCGCCGGCAAAGAGCTaGTGCAGGATGCGGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIISPAKS*CRMRIR Trigger: TCTGATCCGCATCCTGCACCAGCTCTTTGCCGGCGA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTACATTGCCCACTCGGTaGGGTCGCTCTCGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIITLPTR*GRSRRL Trigger: AAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTCTCGTAGGCTTCCATaGTGGCCTGCACCTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIISRRLP*WPAPPL Trigger: TAGAGGAGGTGCAGGCCATCATGGAAGCCTACGAGA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTGGTGGACTGTACAAGTaGAGGCTCACAGCAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIGGLYK*RLTAGS Trigger: GGAACCTGCTGTGAGCCTTCACTTGTACAGTCCACC...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCCGGCAAAGAGCTGGTaGAGGATGCGGATCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIPAKSW*RMRIRS Trigger: TGATCTGATCCGCATCCTGCACCAGCTCTTTGCCGG...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAGCTTCCATGATGGCCTaGACCTCCTCTACATTGACC | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKASMMA*TSSTLT Trigger: GGTCAATGTAGAGGAGGTGCAGGCCATCATGGAAGC...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAATCAGCCAGGGTCCGTaGCTTCAGCACTTCGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRISQGP*LQHFGL Trigger: CAGACCGAAGTGCTGAAGCCACGGACCCTGGCTGAT...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAGCACCTCCTCTACATTaGCCTCATCGCCGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRAPPLH*PHRRQR Trigger: TCTTTGCCGGCGATGAGGTCAATGTAGAGGAGGTGC...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCCTCAGAGGGTTTGGTaGCCCTTAGTTGTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIPQRVW*PLVVLQ Trigger: CTGGAGAACAACTAAGGGGCACCAAACCCTCTGAGG...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTGTACTGGTCGAACTTaGCGTACATTGCCCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIICTGRT*RTLPTR Trigger: CCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATCGCTGGAGACGCGGTaGACACACAAATCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRSLETR*THKSGS Trigger: TGAACCTGATTTGTGTGTGCACCGCGTCTCCAGCGA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAAACCCAGCATTAGAGTaGCGAAACGTAAGGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKNPALE*RNVRMS Trigger: CGACATCCTTACGTTTCGGCACTCTAATGCTGGGTT...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCAGCGAGCCCGAAGTTaGATTTGGAGTTCTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIQRARS*IWSSDS Trigger: GGAATCAGAACTCCAAATGCAACTTCGGGCTCGCTG...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAATATGATCATGAATACTaGTGCCATGTCCTTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKYDHEY*CHVLHP Trigger: GGGGTGAAGGACATGGCAGCAGTATTCATGATCATA...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTAAACCTCAGAGGGTTTaGTGCCCCTTAGTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIKPQRV*CPLVVL Trigger: GAGAACAACTAAGGGGCACCAAACCCTCTGAGGTTT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACAGGTTCCGTATGGCTaGTGTTCTCTACTCGATGTA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRQVPYG*CSLLDV Trigger: TACATCGAGTAGAGAACATCAGCCATACGGAACCTG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTTCTTCTGCAGTAGCTaGGGGCACTATTTGCTTACT | + |
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Preference number: 4 (lower is better) Translates to: SALPFINKWQSAVSSSIIFFCSS*GHYLLT Trigger: AGTAAGCAAATAGTGCCCTCAGCTACTGCAGAAGAA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACGGGTATACCTGTACTaGTCGAACTTGGCGTACATT | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRRVYLY*SNLAYI Trigger: AATGTACGCCAAGTTCGACCAGTACAGGTATACCCG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAGAAAGCAGTGGGAGTTaGTATGATCATGAATACTGC | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKESSGS*YDHEYC Trigger: GCAGTATTCATGATCATACCAACTCCCACTGCTTTC...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAACAGCAGGTTCCGTATaGCTGATGTTCTCTACTCGA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRTAGSV*LMFSTR Trigger: TCGAGTAGAGAACATCAGCCATACGGAACCTGCTGT...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAATTATGTCCTGTTCTTTaGTCAAAGGCATGGCATGTA | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKLCPVL*SKAWHV Trigger: TACATGCCATGCCTTTGATCAAAGAACAGGACATAA...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAACATGGGACACAGACATaGGTTTATGTTTTGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKHGTQT*VYVLVC Trigger: ACAAACCAAAACATAAACTCATGTCTGTGTCCCATG...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAGCCCGAAGTTGCATTTaGAGTTCTGATTCCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: VVGSLFVQGKHTANLKVKARSCI*SSDSKF Trigger: AAATTTGGAATCAGAACTCCAAATGCAACTTCGGGC...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAAGCCAATGGAATCATTaGTGTAGGCACACTGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRSQWNH*CRHTGF Trigger: AAAACCAGTGTGCCTACATCAATGATTCCATTGGCT...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAGCATGTATCAAAAGGTaGACTGTACAAGTGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRACIKR*TVQVKA Trigger: AGCCTTCACTTGTACAGTCCACCTTTTGATACATGC...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACCTTTCATTAACAAATaGCAGAGTGCCGTAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRPFINK*QSAVSS Trigger: GGAACTTACGGCACTCTGCCATTTGTTAATGAAAGG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATGGTTTGTTGTGGTCTaGGGATCATGTACTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRWFVVV*GSCTFL Trigger: TAGAAAAGTACATGATCCCCAGACCACAACAAACCA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATGTTTTGGTTTGTTGTaGTCTGGGGATCATGTACTT | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRCFGLL*SGDHVL Trigger: AAGTACATGATCCCCAGACCACAACAAACCAAAACA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAAATTTTCCATTTCCTTaGTCCACAAGATTTCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LPFINKWQSAVSSSIIHRNFPFP*STRFRV Trigger: TACCCGAAATCTTGTGGATCAAGGAAATGGAAAATT...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS GCA 90 bp | CGTGGCTTCAGCACTTCGGTCTGTTCCATCTCGTGGGGAGCTGGCTaGGCGCGCGTCTCACTGCTGGGCTGCGGTGGAGGAGCTGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: RGFSTSVCSISWGAG*ARVSLLGCGGGAER Trigger: TCGCTCAGCTCCTCCACCGCAGCCCAGCAGTGAGACGCGCGCGCAGCCAGCTCCCCACGAGATGGAACAGACCGAAGTGCTGAAGCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS CCA 90 bp | TCAGCCAGGGTCCGTGGCTTCAGCACTTCGGTCTGTTCCATCTCGTaGGGAGCTGGCTGCGCGCGCGTCTCACTGCTGGGCTGCGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SARVRGFSTSVCSIS*GAGCARVSLLGCGG Trigger: TCCACCGCAGCCCAGCAGTGAGACGCGCGCGCAGCCAGCTCCCCACGAGATGGAACAGACCGAAGTGCTGAAGCCACGGACCCTGGCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS CCA 90 bp | AAGGATGTCGTCGCAGAGACAGCAAGAGACCCACCCCCAGGCCCCTaGCAGCGCAGTGGATCCGGGATCGCTGGAGACGCGGTGCACACA | + |
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Preference number: 5 (lower is better) Translates to: KDVVAETARDPPPGP*QRSGSGIAGDAVHT Trigger: TGTGTGCACCGCGTCTCCAGCGATCCCGGATCCACTGCGCTGCCAGGGGCCTGGGGGTGGGTCTCTTGCTGTCTCTGCGACGACATCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS CCA 90 bp | GGCAAAGAGCTGGTGCAGGATGCGGATCAGATCAGCCAGGGTCCGTaGCTTCAGCACTTCGGTCTGTTCCATCTCGTGGGGAGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKELVQDADQISQGP*LQHFGLFHLVGSWL Trigger: CAGCCAGCTCCCCACGAGATGGAACAGACCGAAGTGCTGAAGCCACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAGCTCTTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS GCA 90 bp | GCCTGCACCTCCTCTACATTGACCTCATCGCCGGCAAAGAGCTGGTaGAGGATGCGGATCAGATCAGCCAGGGTCCGTGGCTTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ACTSSTLTSSPAKSW*RMRIRSARVRGFST Trigger: AGTGCTGAAGCCACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAGCTCTTTGCCGGCGATGAGGTCAATGTAGAGGAGGTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS CCA 90 bp | ATGGCCTGCACCTCCTCTACATTGACCTCATCGCCGGCAAAGAGCTaGTGCAGGATGCGGATCAGATCAGCCAGGGTCCGTGGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MACTSSTLTSSPAKS*CRMRIRSARVRGFS Trigger: GCTGAAGCCACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAGCTCTTTGCCGGCGATGAGGTCAATGTAGAGGAGGTGCAGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS CCA 90 bp | GATCCACAAGATTTCGGGTATACCCCCAGGCCCCTGGCAGCGCAGTaGATCCGGGATCGCTGGAGACGCGGTGCACACACAAATCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DPQDFGYTPRPLAAQ*IRDRWRRGAHTNQV Trigger: AACCTGATTTGTGTGTGCACCGCGTCTCCAGCGATCCCGGATCCACTGCGCTGCCAGGGGCCTGGGGGTATACCCGAAATCTTGTGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502631.1 |
||
| CDS GCA 90 bp | CTGCAAACCACGACCACGACTGTACTGGTCGAACTTGGCGTACATTaGCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCATGATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQTTTTTVLVELGVH*PLGGVALVGFHDGL Trigger: CAGGCCATCATGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS CCA 90 bp | CTGCCACCACCAACAACAAACTGCAAACCACGACCACGACTGTACTaGTCGAACTTGGCGTACATTGCCCACTCGGTGGGGTCGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPPPTTNCKPRPRLY*SNLAYIAHSVGSLS Trigger: CGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGTTTGTTGTTGGTGGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 90 bp | CACAAGATTTCGGGTATACCTGTACTGGTCGAACTTGGCGTACATTaGCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCATGATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKISGIPVLVELGVH*PLGGVALVGFHDGL Trigger: CAGGCCATCATGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGGTATACCCGAAATCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS CCA 90 bp | CAACAACAAACTGCAAACCACGACCACGACTGTACTGGTCGAACTTaGCGTACATTGCCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QQQTANHDHDCTGRT*RTLPTRWGRSRRLP Trigger: TGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGTTTGTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 90 bp | GCTAGACCGCTAAGCAGACACACACGCACAAACCCAGCATTAGAGTaGCGAAACGTAAGGATGTCGTCGCAGAGACAGCAAGAGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARPLSRHTRTNPALE*RNVRMSSQRQQETH Trigger: GTGGGTCTCTTGCTGTCTCTGCGACGACATCCTTACGTTTCGGCACTCTAATGCTGGGTTTGTGCGTGTGTGTCTGCTTAGCGGTCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS GCA 90 bp | GTATACCACAACCAACCACCACCACTGCCACCACCAACAACAAACTaGAAACCACGACCACGACTGTACTGGTCGAACTTGGCGTACATT | + |
|
Preference number: 5 (lower is better) Translates to: VYHNQPPPLPPPTTN*KPRPRLYWSNLAYI Trigger: AATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGTTTGTTGTTGGTGGTGGCAGTGGTGGTGGTTGGTTGTGGTATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 90 bp | CTTGATCCACAAGATTTCGGGTATACCACAACCAACCACCACCACTaGCACCACCAACAACAAACTGCAAACCACGACCACGACTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LDPQDFGYTTTNHHH*HHQQQTANHDHDCT Trigger: AGTACAGTCGTGGTCGTGGTTTGCAGTTTGTTGTTGGTGGTGGCAGTGGTGGTGGTTGGTTGTGGTATACCCGAAATCTTGTGGATCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 90 bp | GGCAAACATACAGCGAACCTTAAAGTAAAACCTCAGAGGGTTTGGTaGCCCTTAGTTGTTCTCCAGCGAGCCCGAAGTTGCATTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKHTANLKVKPQRVW*PLVVLQRARSCIWS Trigger: ACTCCAAATGCAACTTCGGGCTCGCTGGAGAACAACTAAGGGGCACCAAACCCTCTGAGGTTTTACTTTAAGGTTCGCTGTATGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000502631.1 |
||
| CDS CCA 90 bp | CAAGGCAAACATACAGCGAACCTTAAAGTAAAACCTCAGAGGGTTTaGTGCCCCTTAGTTGTTCTCCAGCGAGCCCGAAGTTGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGKHTANLKVKPQRV*CPLVVLQRARSCIW Trigger: CCAAATGCAACTTCGGGCTCGCTGGAGAACAACTAAGGGGCACCAAACCCTCTGAGGTTTTACTTTAAGGTTCGCTGTATGTTTGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000502631.1 |
||
| CDS TCA 90 bp | AAGGTGGACTGTACAAGTGAAGGCTCACAGCAGGTTCCGTATGGCTaGTGTTCTCTACTCGATGTAAGCCAATGGAATCTTCACTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVDCTSEGSQQVPYG*CSLLDVSQWNLHLC Trigger: GCACAAGTGAAGATTCCATTGGCTTACATCGAGTAGAGAACATCAGCCATACGGAACCTGCTGTGAGCCTTCACTTGTACAGTCCACCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502631.1 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACGAACTTGGCGTACATaGCCCACTCGGTGGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFINKWQSAVSSSIIHRRTWRT*PTRWGR Trigger: GCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGATGCACCTCCTCTACATaGACCTCATCGCCGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPFINKWQSAVSSSIIHRCTSST*TSSPAK Trigger: CTTTGCCGGCGATGAGGTCAATGTAGAGGAGGTGCA...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGACTGTACTGGTCGAACTaGGCGTACATTGCCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPFINKWQSAVSSSIIHRLYWSN*AYIAHS Trigger: CGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAG...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS TCA 90 bp | CCTTCACCCCAACAGAGAATCATCAGATTAAATTTTCCATTTCCTTaGTCCACAAGATTTCGGGTATACCTGTACTGGTCGAACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSPQQRIIRLNFPFP*STRFRVYLYWSNLA Trigger: CGCCAAGTTCGACCAGTACAGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTGGGGTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAAAAACCTCAGAGGGTTaGGTGCCCCTTAGTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVGSLFVQGKHTANLKVKKTSEG*VPLSCS Trigger: AGAACAACTAAGGGGCACCAAACCCTCTGAGGTTTT...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 43% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGTAGCCTTTTTGTCCAAGGCAAACATACAGCGAACCTTAAAGTAAAAACTCTTTCAGACTTCTaGACCATCTCATTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVGSLFVQGKHTANLKVKTLSDF*TISLDF Trigger: AAAATCCAATGAGATGGTCAAGAAGTCTGAAAGAGT...TTTTACTTTAAGGTTCGCTGTATGTTTGCCTTGGACAAAAAGGCTACCTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTTTATGTCCTGTTCTTaGATCAAAGGCATGGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SALPFINKWQSAVSSSIIFMSCS*IKGMAC Trigger: ACATGCCATGCCTTTGATCAAAGAACAGGACATAAA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTTTATGTTTTGGTTTGTaGTGGTCTGGGGATCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SALPFINKWQSAVSSSIILCFGL*WSGDHV Trigger: TACATGATCCCCAGACCACAACAAACCAAAACATAA...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTAGTTTATGTTTTGGTTaGTTGTGGTCTGGGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SALPFINKWQSAVSSSIISLCFG*LWSGDH Trigger: ATGATCCCCAGACCACAACAAACCAAAACATAAACT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTCATAGAAGCAGTACAAAATCTTaGACTATGACCATGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPFINKWQSAVSSSIIHRSSTKS*TMTMGH Trigger: GTGTCCCATGGTCATAGTCAAAGATTTTGTACTGCT...TCTATGAATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTAAATTTTCCATTTCCTaGATCCACAAGATTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SALPFINKWQSAVSSSIIKFSIS*IHKISG Trigger: ACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS-3UTR CAA 90 bp | TCTGCACTTCCTTTCATTAACAAATGGCAGAGTGCCGTAAGTTCCTCTATTATTATCTCATTGGATTTTTaGTCAGGCCAGGCAAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: SALPFINKWQSAVSSSIIISLDF*SGQANN Trigger: ATTATTTGCCTGGCCTGACAAAAAATCCAATGAGAT...AATAATAGAGGAACTTACGGCACTCTGCCATTTGTTAATGAAAGGAAGTGCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS GCA 72 bp | AGCACTTCGGTCTGTTCCATCTCGTGGGGAGCTGGCTaGGCGCGCGTCTCACTGCTGGGCTGCGGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: STSVCSISWGAG*ARVSLLGCGGG Trigger: TCCTCCACCGCAGCCCAGCAGTGAGACGCGCGCGCAGCCAGCTCCCCACGAGATGGAACAGACCGAAGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS CCA 72 bp | GTCCGTGGCTTCAGCACTTCGGTCTGTTCCATCTCGTaGGGAGCTGGCTGCGCGCGCGTCTCACTGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRGFSTSVCSIS*GAGCARVSLLG Trigger: GCCCAGCAGTGAGACGCGCGCGCAGCCAGCTCCCCACGAGATGGAACAGACCGAAGTGCTGAAGCCACGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS CCA 72 bp | GATTTCGGGTATACCCCCAGGCCCCTGGCAGCGCAGTaGATCCGGGATCGCTGGAGACGCGGTGCACACACA | + |
|
Preference number: 6 (lower is better) Translates to: DFGYTPRPLAAQ*IRDRWRRGAHT Trigger: TGTGTGTGCACCGCGTCTCCAGCGATCCCGGATCCACTGCGCTGCCAGGGGCCTGGGGGTATACCCGAAATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502631.1 |
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| CDS CCA 72 bp | CCCAGGCCCCTGGCAGCGCAGTGGATCCGGGATCGCTaGAGACGCGGTGCACACACAAATCAGGTTCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PRPLAAQWIRDR*RRGAHTNQVQI Trigger: GATCTGAACCTGATTTGTGTGTGCACCGCGTCTCCAGCGATCCCGGATCCACTGCGCTGCCAGGGGCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000250535.5 ENST00000502631.1 ENST00000504613.1 |
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| CDS CCA 72 bp | CTGGTGCAGGATGCGGATCAGATCAGCCAGGGTCCGTaGCTTCAGCACTTCGGTCTGTTCCATCTCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVQDADQISQGP*LQHFGLFHLVG Trigger: CCCCACGAGATGGAACAGACCGAAGTGCTGAAGCCACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
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| CDS GCA 72 bp | TCCTCTACATTGACCTCATCGCCGGCAAAGAGCTGGTaGAGGATGCGGATCAGATCAGCCAGGGTCCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTLTSSPAKSW*RMRIRSARVRG Trigger: GCCACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAGCTCTTTGCCGGCGATGAGGTCAATGTAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS CAA 72 bp | CACGACCACGACTGTACTGGTCGAACTTGGCGTACATaGCCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HDHDCTGRTWRT*PTRWGRSRRLP Trigger: TGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 72 bp | ACGACCACGACTGTACTGGTCGAACTTGGCGTACATTaGCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TTTTVLVELGVH*PLGGVALVGFH Trigger: ATGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS CCA 72 bp | ACCTCCTCTACATTGACCTCATCGCCGGCAAAGAGCTaGTGCAGGATGCGGATCAGATCAGCCAGGGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TSSTLTSSPAKS*CRMRIRSARVR Trigger: ACGGACCCTGGCTGATCTGATCCGCATCCTGCACCAGCTCTTTGCCGGCGATGAGGTCAATGTAGAGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS CCA 72 bp | ACTGCAAACCACGACCACGACTGTACTGGTCGAACTTaGCGTACATTGCCCACTCGGTGGGGTCGCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TANHDHDCTGRT*RTLPTRWGRSR Trigger: ACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS CAA 72 bp | AACTGCAAACCACGACCACGACTGTACTGGTCGAACTaGGCGTACATTGCCCACTCGGTGGGGTCGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NCKPRPRLYWSN*AYIAHSVGSLS Trigger: CGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS GCA 72 bp | TCGGGTATACCTGTACTGGTCGAACTTGGCGTACATTaGCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGIPVLVELGVH*PLGGVALVGFH Trigger: ATGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGGTATACCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS CAA 72 bp | TTCGGGTATACCTGTACTGGTCGAACTTGGCGTACATaGCCCACTCGGTGGGGTCGCTCTCGTAGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FGYTCTGRTWRT*PTRWGRSRRLP Trigger: TGGAAGCCTACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGGTATACCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS CCA 72 bp | CCACAAGATTTCGGGTATACCTGTACTGGTCGAACTTaGCGTACATTGCCCACTCGGTGGGGTCGCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PQDFGYTCTGRT*RTLPTRWGRSR Trigger: ACGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGGTATACCCGAAATCTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS CCA 72 bp | CCAACAACAAACTGCAAACCACGACCACGACTGTACTaGTCGAACTTGGCGTACATTGCCCACTCGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTNCKPRPRLY*SNLAYIAHSVG Trigger: CCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGTCGTGGTCGTGGTTTGCAGTTTGTTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504613.1 |
||
| CDS CAA 72 bp | TCCACAAGATTTCGGGTATACCTGTACTGGTCGAACTaGGCGTACATTGCCCACTCGGTGGGGTCGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: STRFRVYLYWSN*AYIAHSVGSLS Trigger: CGAGAGCGACCCCACCGAGTGGGCAATGTACGCCAAGTTCGACCAGTACAGGTATACCCGAAATCTTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
||
| CDS CAA 72 bp | ATTCACAGCCTGGCCCACACGGGAGCATATTCTGTCTaGATTCTTCTGCACTGGCCCTCCCAAAGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IHSLAHTGAYSV*ILLHWPSQSQR Trigger: TCTCTGACTTTGGGAGGGCCAGTGCAGAAGAATCAAGACAGAATATGCTCCCGTGTGGGCCAGGCTGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504877.1 |
||
| CDS GCA 72 bp | CTAAGCAGACACACACGCACAAACCCAGCATTAGAGTaGCGAAACGTAAGGATGTCGTCGCAGAGACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSRHTRTNPALE*RNVRMSSQRQQ Trigger: TTGCTGTCTCTGCGACGACATCCTTACGTTTCGGCACTCTAATGCTGGGTTTGTGCGTGTGTGTCTGCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000504613.1 |
||
| CDS CCA 72 bp | CATACAGCGAACCTTAAAGTAAAACCTCAGAGGGTTTaGTGCCCCTTAGTTGTTCTCCAGCGAGCCCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HTANLKVKPQRV*CPLVVLQRARS Trigger: ACTTCGGGCTCGCTGGAGAACAACTAAGGGGCACCAAACCCTCTGAGGTTTTACTTTAAGGTTCGCTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000502631.1 |
||
| CDS CAA 90 bp | TTTCAAAGAATTCACAGCCTGGCCCACACGGGAGCATATTCTGTCTaGATTCTTCTGCACTGGCCCTCCCAAAGTCAGAGAACAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: FQRIHSLAHTGAYSV*ILLHWPSQSQRTES Trigger: GGATTCTGTTCTCTGACTTTGGGAGGGCCAGTGCAGAAGAATCAAGACAGAATATGCTCCCGTGTGGGCCAGGCTGTGAATTCTTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504877.1 |
||
| CDS CCA 72 bp | CACACGGGAGCATATTCTGTCTTGATTCTTCTGCACTaGCCCTCCCAAAGTCAGAGAACAGAATCCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HTGAYSVLILLH*PSQSQRTESFT Trigger: TGTGAAGGATTCTGTTCTCTGACTTTGGGAGGGCCAGTGCAGAAGAATCAAGACAGAATATGCTCCCGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504877.1 |
||
| CDS TCA 72 bp | TGTACAAGTGAAGGCTCACAGCAGGTTCCGTATGGCTaGTGTTCTCTACTCGATGTAAGCCAATGGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: CTSEGSQQVPYG*CSLLDVSQWNH Trigger: ATGATTCCATTGGCTTACATCGAGTAGAGAACATCAGCCATACGGAACCTGCTGTGAGCCTTCACTTGTACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS TCA 72 bp | TGTACAAGTGAAGGCTCACAGCAGGTTCCGTATGGCTaGTGTTCTCTACTCGATGTAAGCCAATGGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: CTSEGSQQVPYG*CSLLDVSQWNL Trigger: AAGATTCCATTGGCTTACATCGAGTAGAGAACATCAGCCATACGGAACCTGCTGTGAGCCTTCACTTGTACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502631.1 |
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| CDS CCA 72 bp | GATTTCCCTGTAGCATCTTCAGAAAGCAGTGGGAGTTaGTATGATCATGAATACTGCTGCCATGTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DFPVASSESSGS*YDHEYCCHVLH Trigger: GTGAAGGACATGGCAGCAGTATTCATGATCATACCAACTCCCACTGCTTTCTGAAGATGCTACAGGGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000502631.1 |
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| CDS CAA 90 bp | TCCTTCACCCCAACAGAGAATCATCAGATTAAATTTTCCATTTCCTaGATCCACAAGATTTCGGGTATACCTGTACTGGTCGAACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SFTPTENHQIKFSIS*IHKISGIPVLVELG Trigger: GCCAAGTTCGACCAGTACAGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTGGGGTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS CAA 90 bp | TCCCTCAAGACTCTTTCAGACTTCTTGACCATCTCATTGGATTTTTaGTCAGGCCAGGCAAATAATGTCTCCTTTAGATTTCCCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SLKTLSDFLTISLDF*SGQANNVSFRFPCS Trigger: GCTACAGGGAAATCTAAAGGAGACATTATTTGCCTGGCCTGACAAAAAATCCAATGAGATGGTCAAGAAGTCTGAAAGAGTCTTGAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000250535.5 ENST00000502631.1 |
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| CDS TCA 72 bp | CAACAGAGAATCATCAGATTAAATTTTCCATTTCCTTaGTCCACAAGATTTCGGGTATACCTGTACTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: QQRIIRLNFPFP*STRFRVYLYWS Trigger: CGACCAGTACAGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250535.5 |
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| CDS CAA 90 bp | TCCTTCACCCCAACAGAGAATCATCAGATTAAATTTTCCATTTCCTaGATCCACAAGATTTCGGGTATACCTTCAATTCACAGTAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SFTPTENHQIKFSIS*IHKISGIPSIHSKL Trigger: CAGTTTACTGTGAATTGAAGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTGGGGTGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504877.1 |
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| CDS TCA 72 bp | CAACAGAGAATCATCAGATTAAATTTTCCATTTCCTTaGTCCACAAGATTTCGGGTATACCACAACCAACCA | + |
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Preference number: 6 (lower is better) Translates to: QQRIIRLNFPFP*STRFRVYHNQP Trigger: TGGTTGGTTGTGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504613.1 |
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| CDS TCA 72 bp | CAACAGAGAATCATCAGATTAAATTTTCCATTTCCTTaGTCCACAAGATTTCGGGTATACCTTCAATTCACA | + |
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Preference number: 6 (lower is better) Translates to: QQRIIRLNFPFP*STRFRVYLQFT Trigger: TGTGAATTGAAGGTATACCCGAAATCTTGTGGATCAAGGAAATGGAAAATTTAATCTGATGATTCTCTGTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504877.1 |
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