Pregenerated sensors for CDNF (Homo sapiens)
Ensembl gene IDs: ENSG00000185267Ensembl transcript IDs: ENST00000378441.6, ENST00000378442.5, ENST00000465530.2, ENST00000466269.1, ENST00000467405.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCAATGGGAAAAACGAGTACTCCTGCCTGACCATTTCTGATACCAAAGAGAGCGGAACTTTTAGCTTTTaGTACACTGCAAATGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SNGKNEYSCLTISDTKESGTFSF*YTANVS Trigger: ACTTACATTTGCAGTGTACCAAAAGCTAAAAGTTCC...GCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| 3UTR GCA 72 bp | AGTGGGTTTTCTTCCAATGGGAAAAACGAGTACTCCTaGCTGACCATTTCTGATACCAAAGAGAGCTACAAT | + |
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Preference number: 3 (lower is better) Translates to: SGFSSNGKNEYS*LTISDTKESYN Trigger: ATTGTAGCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGAAGAAAACCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | TCCAATGGGAAAAACGAGTACTCCTGCCTGACCATTTCTGATACCAAAGAGAGCTTTGGGGTGTGTCGCTaGATACTTGGGGGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SNGKNEYSCLTISDTKESFGVCR*ILGGQL Trigger: GAGCTGGCCCCCAAGTATGCAGCGACACACCCCAAA...GCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTGCGTCAGCACCGGGTaGGAGACCAAAAGCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLCVSTG*ETKSPA Trigger: CGCCGGGCTTTTGGTCTCTCACCCGGTGCTGACGCA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAAGGTCATCCACAGGCTTaGGAGCGGCGTGTCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQGHPQA*ERRVAG Trigger: GCCGGCGACACGCCGCTCTCAAGCCTGTGGATGACC...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTGGCCGTCTATAAGGTaGGGGGCTGCGGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLWPSIR*GAAELG Trigger: GCCCAGCTCCGCAGCCCCTCACCTTATAGACGGCCA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCGGCCACCACAGCAACTaGGCTCGCGCACCACATGCT | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLGHHSN*ARAPHA Trigger: AGCATGTGGTGCGCGAGCCCAGTTGCTGTGGTGGCC...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | TCCAATGGGAAAAACGAGTACTCCTGCCTGACCATTTCTGATACCAAAGAGAGCCTGGAAGACGGAAGTTaGAGTGAGCTGAGACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNGKNEYSCLTISDTKESLEDGS*SELRLF Trigger: GAACAGTCTCAGCTCACTGCAACTTCCGTCTTCCAG...GCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR GCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTCACCGCCCACCAAGCTaGCAAAGCGAGCTGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFHRPPS*QSELSR Trigger: TCTGCTCAGCTCGCTTTGGCAGCTTGGTGGGCGGTG...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTGGCTCGCGCACCACATaGTGGGCCAGCAGCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFGSRTT*WASSFN Trigger: ATTGAAGCTGCTGGCCCAGCATGTGGTGCGCGAGCC...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGGCCACCCGGTTTTCTaGCGCTGGGTCATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ETKYDAFPVILNQHVHILGHPVF*RWVIHR Trigger: CCTGTGGATGACCCAGCGCCAGAAAACCGGGTGGCC...TAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTCGCGCACCACATGCTaGGCCAGCAGCTTCAATCGC | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLSRTTC*ASSFNR Trigger: GCGATTGAAGCTGCTGGCCCAGCATGTGGTGCGCGA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | TCCAATGGGAAAAACGAGTACTCCTGCCTGACCATTTCTGATACCAAAGAGAGCCACTCATTGGGCGAGTaGCTTCACTTAGGATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SNGKNEYSCLTISDTKESHSLGE*LHLGSL Trigger: CAAAGATCCTAAGTGAAGTCACTCGCCCAATGAGTG...GCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCCCGGTTTTCTGGCGCTaGGTCATCCACAGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLPVFWR*VIHRLE Trigger: CTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGG...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTATGGGCTAGGGCTTCATaGCGGCCACCCGGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLWARAS*RPPGFL Trigger: CAGAAAACCGGGTGGCCGTCATGAAGCCCTAGCCCA...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR GCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATTTTGGGGTGTGTCGCTaGATACTTGGGGGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHFGVCR*ILGGQL Trigger: GAGCTGGCCCCCAAGTATGCAGCGACACACCCCAAA...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | TCCAATGGGAAAAACGAGTACTCCTGCCTGACCATTTCTGATACCAAAGAGAGCTACAAGTCACAAATGTaGTGGCATTGGAGATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNGKNEYSCLTISDTKESYKSQM*WHWRSE Trigger: CTCTGATCTCCAATGCCAGCACATTTGTGACTTGTA...GCTCTCTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTTCCCATTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGGAGGGAGGATCACTTaGGCCTGGAAGACGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLGGRIT*AWKTEV Trigger: AACTTCCGTCTTCCAGGCTCAAGTGATCCTCCCTCC...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTGCCAAAGCGAGCTaGGCAGAATTCGAGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLAAKAS*AEFEVG Trigger: TCCAACCTCGAATTCTGCTCAGCTCGCTTTGGCAGC...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTACAAGCTTCTTTACCTaGGCTGCACCTCAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLTSFFT*AAPQPV Trigger: CACAGGCTGAGGTGCAGCCCAGGTAAAGAAGCTTGT...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAAGTACTCCAACCTGGGTaGCAGAGTGAGGCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQVLQPG*QSEAQT Trigger: AGTTTGAGCCTCACTCTGTCACCCAGGTTGGAGTAC...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATCTTCCGCAGGTCAACTaGTGCCAAGTCCAGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHLPQVN*CQVQCF Trigger: AAAACACTGGACTTGGCATCAGTTGACCTGCGGAAG...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | GAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTACTTCCGCAGGTCAACTaGTGCCAAGTCCAGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ETKYDAFPVILNQHVHILLPQVN*CQVQCF Trigger: AAAACACTGGACTTGGCATCAGTTGACCTGCGGAAG...TAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTTCATTGCAGGCATATaGACACTCATTGGGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLFIAGI*TLIGRV Trigger: CACTCGCCCAATGAGTGTGCATATGCCTGCAATGAA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGATCTGCTTCAGCTCTaGCACTCTCATCTTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLDLLQL*HSHLPQ Trigger: CTGCGGAAGATGAGAGTGGCAGAGCTGAAGCAGATC...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | CACAAAAAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATCAGCTATGCAGGATCTaGTTCAGCTCTGCCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: HKKHETKYDAFPVILNQHQLCRI*FSSATL Trigger: GAGAGTGGCAGAGCTGAAGCAGATCCTGCATAGCTG...ATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTTTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTACAGCTATGCAGGATCTaGTTCAGCTCTGCCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLQLCRI*FSSATL Trigger: GAGAGTGGCAGAGCTGAAGCAGATCCTGCATAGCTG...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | CACAAAAAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATACCTGGGTGACAGAGTaGGGCTCAAACTGTTATGTC | + |
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Preference number: 4 (lower is better) Translates to: HKKHETKYDAFPVILNQHTWVTE*GSNCYV Trigger: GACATAACAGTTTGAGCCTCACTCTGTCACCCAGGT...ATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTTTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR TCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTCTGCCTGACCATTTCTaGTACCAAAGAGAGCTACAA | + |
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Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFLPDHF*YQRELQ Trigger: TTGTAGCTCTCTTTGGTATCAGAAATGGTCAGGCAG...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATACGAGTACTCCTGCCTaGCCATTTCTGATACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHTSTPA*PFLIPK Trigger: CTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGT...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTTCATTGCAGGCATATaGACACTCATTGGGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLFIAGI*TLIGRV Trigger: CACTCGCCCAATGAGTGTGCATATGCCTGCAATGAA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTGGCTGCGTCTTTTGTaGCTCCTAGATAATAGCACA | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLWLRLL*LLDNST Trigger: TGTGCTATTATCTAGGAGCCACAAAAGACGCAGCCA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTCACTTAGGATCTTTGTaGCTGCGTCTTTTGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLHLGSL*LRLLWL Trigger: GAGCCACAAAAGACGCAGCCACAAAGATCCTAAGTG...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTTCAGCTCACAGATCTaGCTATCCAACTTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLFSSQI*LSNFFS Trigger: GCTGAAGAAGTTGGATAGCCAGATCTGTGAGCTGAA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFSSVYQ*LVESVQ Trigger: TTGAACCGATTCTACAAGTCACTGATAGACAGAGGA...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAACACTCATTGGGCGAGTaGCTTCACTTAGGATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQHSLGE*LHLGSL Trigger: CAAAGATCCTAAGTGAAGTCACTCGCCCAATGAGTG...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATGGGCCAGCTCTTGAATaGGATTCACATAGTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHGPALE*DSHSQF Trigger: AAACTGACTATGTGAATCTCATTCAAGAGCTGGCCC...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTCTGCCTGACCATTTCTaGTACCAAAGAGAGCTACAA | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLLPDHF*YQRELQ Trigger: TTGTAGCTCTCTTTGGTATCAGAAATGGTCAGGCAG...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | CACAAAAAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATACGAGTACTCCTGCCTaGCCATTTCTGATACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HKKHETKYDAFPVILNQHTSTPA*PFLIPK Trigger: CTTTGGTATCAGAAATGGTCAGGCAGGAGTACTCGT...ATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTTTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTGGCTGCGTCTTTTGTaGCTCCTAGATAATAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLWLRLL*LLDNST Trigger: TGTGCTATTATCTAGGAGCCACAAAAGACGCAGCCA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLSSVYQ*LVESVQ Trigger: TTGAACCGATTCTACAAGTCACTGATAGACAGAGGA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR TCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAAGGGCCAGCTCTTGAATaGGATTCACATAGTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQGPALE*DSHSQF Trigger: AAACTGACTATGTGAATCTCATTCAAGAGCTGGCCC...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATTACAAGTCACAAATGTaGTGGCATTGGAGATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHYKSQM*WHWRSE Trigger: CTCTGATCTCCAATGCCAGCACATTTGTGACTTGTA...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAAAAAACGAGTACTCCTaGCTGACCATTTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: ETKYDAFPVILNQHVHILKNEYS*LTISDT Trigger: GGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTT...TAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTCAAATGTGCTGGCATTaGAGATCAGAGCTCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLQMCWH*RSELCF Trigger: AAAACAGAGCTCTGATCTCCAATGCCAGCACATTTG...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTGGGTTTTCTTCCAATaGGAAAAACGAGTACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLWVFFQ*EKRVLL Trigger: CAGGAGTACTCGTTTTTCCCATTGGAAGAAAACCCA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATTGGGTTTTCTTCCAATaGGAAAAACGAGTACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHETKYDAFPVILNQHVHWVFFQ*EKRVLL Trigger: CAGGAGTACTCGTTTTTCCCATTGGAAGAAAACCCA...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTGTTATGTCCTTCCTCTaGGATTACACAAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLVMSFL*DYTSFF Trigger: AAAGAAGCTTGTGTAATCGCAGAGGAAGGACATAAC...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR GCA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAAAAAACGAGTACTCCTaGCTGACCATTTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: GNENWHSHSKKLMRKELLKNEYS*LTISDT Trigger: GGTATCAGAAATGGTCAGGCAGGAGTACTCGTTTTT...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | CACAAAAAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATCAAATGTGCTGGCATTaGAGATCAGAGCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKKHETKYDAFPVILNQHQMCWH*RSELCF Trigger: AAAACAGAGCTCTGATCTCCAATGCCAGCACATTTG...ATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTTTTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTACAGGCAATGAAAACTaGCATAGTCATTCCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFTGNEN*HSHSKK Trigger: TTTCTTGGAATGACTATGCCAGTTTTCATTGCCTGT...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR GCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAAAGAGGAGTCTCTGAATaGCTTCTTCTTTCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQRGVSE*LLLSWN Trigger: ATTCCAAGAAAGAAGAAGGCATTCAGAGACTCCTCT...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTGGAACTTTTAGCTTTTaGTACACTGCAAATGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DAFPVILNQHVHILESHFGTFSF*YTANVS Trigger: ACTTACATTTGCAGTGTACCAAAAGCTAAAAGTTCC...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCGGAACTTTTAGCTTTTaGTACACTGCAAATGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLGTFSF*YTANVS Trigger: ACTTACATTTGCAGTGTACCAAAAGCTAAAAGTTCC...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTTAAGTAGGTTTAAGTaGGTTTTCTTCCAATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPVILNQHVHILESHFSLLSRFK*VFFQWE Trigger: TTCCCATTGGAAGAAAACCCACTTAAACCTACTTAA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | AGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAGCTTTTGGTACACTGCAAACAGGCAATGAAAACTaGCATAGTCATTCCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSKKLMRKELLAFGTLQTGNEN*HSHSKK Trigger: TTTCTTGGAATGACTATGCCAGTTTTCATTGCCTGT...TTGCAGTGTACCAAAAGCTAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTTGCCTTCTTCTTTCTTaGAATCAATTTACTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFFFLGINLLHQFVSRSLCLLLS*NQFTPS Trigger: TGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGCA...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS GCA 90 bp | GCCCGGCGCAAAAGGCCACCACAGCAACTGGGCTCGCGCACCACATaGTGGGCCAGCAGCTTCAATCGCCTCCGCCACCCGCGCCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ARRKRPPQQLGSRTT*WASSFNRLRHPRPP Trigger: CGGTGGGCGCGGGTGGCGGAGGCGATTGAAGCTGCTGGCCCAGCATGTGGTGCGCGAGCCCAGTTGCTGTGGTGGCCTTTTGCGCCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS CCA 90 bp | CGGCGCAAAAGGCCACCACAGCAACTGGGCTCGCGCACCACATGCTaGGCCAGCAGCTTCAATCGCCTCCGCCACCCGCGCCCACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRKRPPQQLGSRTTC*ASSFNRLRHPRPPP Trigger: GGGCGGTGGGCGCGGGTGGCGGAGGCGATTGAAGCTGCTGGCCCAGCATGTGGTGCGCGAGCCCAGTTGCTGTGGTGGCCTTTTGCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS CCA 90 bp | GGCTGCGGAGCTGGGCTAGGGCTTCATGACGGCCACCCGGTTTTCTaGCGCTGGGTCATCCACAGGCTTGAGAGCGGCGTGTCGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCGAGLGLHDGHPVF*RWVIHRLESGVSPA Trigger: GGCCGGCGACACGCCGCTCTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGGGTGGCCGTCATGAAGCCCTAGCCCAGCTCCGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS GCA 90 bp | CTGGGCTGCACCTCAGCCTGTGTGGCCGTCTATAAGGTGAGGGGCTaGGGAGCTGGGCTAGGGCTTCATGACGGCCACCCGGTTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGCTSACVAVYKVRG*GAGLGLHDGHPVFW Trigger: CCAGAAAACCGGGTGGCCGTCATGAAGCCCTAGCCCAGCTCCGCAGCCCCTCACCTTATAGACGGCCACACAGGCTGAGGTGCAGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS-3UTR CAA 90 bp | GATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTGGGTCATCCACAGGCTaGAGAGCGGCGTGTCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DAFPVILNQHVHILESHFGSSTG*RAACRR Trigger: CCGGCGACACGCCGCTCTCAAGCCTGTGGATGACCC...AAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS TCA 90 bp | TCTCACAAATCTTCATTGCAGGCATATGCACACTCATTGGGCGAGTaGCTTCACTTAGGATCTTTGTGGCTGCGTCTTTTGTGGCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SHKSSLQAYAHSLGE*LHLGSLWLRLLWLL Trigger: TAGGAGCCACAAAAGACGCAGCCACAAAGATCCTAAGTGAAGTCACTCGCCCAATGAGTGTGCATATGCCTGCAATGAAGATTTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 ENST00000467405.1 |
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| CDS GCA 90 bp | CTATCCAACTTCTTCAGCTTCTCACAAATCTTCATTGCAGGCATATaGACACTCATTGGGCGAGTGACTTCACTTAGGATCTTTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSNFFSFSQIFIAGI*TLIGRVTSLRIFVA Trigger: AGCCACAAAGATCCTAAGTGAAGTCACTCGCCCAATGAGTGTGCATATGCCTGCAATGAAGATTTGTGAGAAGCTGAAGAAGTTGGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 ENST00000467405.1 |
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| CDS-3UTR CAA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTGATCAGAGCTCTGTTTaGGGGTGTGTCGCTGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: AFFFLGINLLHQFVSRSLDQSSV*GCVAAY Trigger: GTATGCAGCGACACACCCCAAAACAGAGCTCTGATC...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCTTGTGGCTGCGTCTTTaGTGGCTCCTAGATAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPVILNQHVHILESHFSLLWLRL*WLLDNS Trigger: GCTATTATCTAGGAGCCACAAAAGACGCAGCCACAA...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATCTTGGGGGCCAGCTCTaGAATGAGATTCACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KHETKYDAFPVILNQHVHLGGQL*NEIHIV Trigger: GACTATGTGAATCTCATTCAAGAGCTGGCCCCCAAG...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | GAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTACTTGGGGGCCAGCTCTaGAATGAGATTCACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ETKYDAFPVILNQHVHILLGGQL*NEIHIV Trigger: GACTATGTGAATCTCATTCAAGAGCTGGCCCCCAAG...TAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | AAGCATGAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATTTGTGGCTGCGTCTTTaGTGGCTCCTAGATAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHETKYDAFPVILNQHVHLWLRL*WLLDNS Trigger: GCTATTATCTAGGAGCCACAAAAGACGCAGCCACAA...ATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTCATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCTTCTTTCTTGGAATCAATTTACTCCATCAATTTGTCAGTAGGTCACTTACAAATGTGCTGGCATaGGAGATCAGAGCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFFFLGINLLHQFVSRSLTNVLA*EIRALF Trigger: AAACAGAGCTCTGATCTCCAATGCCAGCACATTTGT...AAGTGACCTACTGACAAATTGATGGAGTAAATTGATTCCAAGAAAGAAGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS TCA 90 bp | TTTCTCTATAGTGTCCAGCGAAAAGTTAACTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAAGAATTCTTTACATACTGTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLYSVQRKVNSSVYQ*LVESVQEFFTYCSP Trigger: TGGACTACAGTATGTAAAGAATTCTTGAACCGATTCTACAAGTCACTGATAGACAGAGGAGTTAACTTTTCGCTGGACACTATAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS TCA 90 bp | TTTCTCTATAGTGTCCAGCGAAAAGTTAACTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAAGAATTCTTTACATACTTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLYSVQRKVNSSVYQ*LVESVQEFFTYFTV Trigger: GACTGTGAAGTATGTAAAGAATTCTTGAACCGATTCTACAAGTCACTGATAGACAGAGGAGTTAACTTTTCGCTGGACACTATAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGAGAGTCACTTTTCTCTCATGCCTTCTTCTTTCTaGGAATCAATTTACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FPVILNQHVHILESHFSLMPSSF*ESIYSI Trigger: GATGGAGTAAATTGATTCCAAGAAAGAAGAAGGCAT...GAGAGAAAAGTGACTCTCTAGGATATGGACATGTTGATTAAGGATAACTGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS-3UTR CAA 90 bp | GAGACCAAATATGATGCATTCCCAGTTATCCTTAATCAACATGTCCATATCCTAGGAATGAAAAAGACCTaGAGCTTGGTTCAATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: ETKYDAFPVILNQHVHILGMKKT*SLVQLT Trigger: TGTTAATTGAACCAAGCTCAAGGTCTTTTTCATTCC...TAGGATATGGACATGTTGATTAAGGATAACTGGGAATGCATCATATTTGGTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS TCA 90 bp | TTTCTCTATAGTGTCCAGCGAAAAGTTAACTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAAGAATTCTTTACATACAAACTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLYSVQRKVNSSVYQ*LVESVQEFFTYKLL Trigger: TAACAGTTTGTATGTAAAGAATTCTTGAACCGATTCTACAAGTCACTGATAGACAGAGGAGTTAACTTTTCGCTGGACACTATAGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378441.6 ENST00000466269.1 |
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| CDS-3UTR CAA 90 bp | GGCAATGAAAACTGGCATAGTCATTCCAAGAAACTTATGAGAAAGGAACTTTTAATGCCTTCTTCTTTCTaGGAATCAATTTACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GNENWHSHSKKLMRKELLMPSSF*ESIYSI Trigger: GATGGAGTAAATTGATTCCAAGAAAGAAGAAGGCAT...TAAAAGTTCCTTTCTCATAAGTTTCTTGGAATGACTATGCCAGTTTTCATTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378442.5 ENST00000465530.2 |
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| CDS TCA 72 bp | CCACCCGGTTTTCTGGCGCTGGGTCATCCACAGGCTTaGGAGCGGCGTGTCGCCGGCCTAGGGATGTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGFLALGHPQA*ERRVAGLGMSW Trigger: CCACGACATCCCTAGGCCGGCGACACGCCGCTCTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS CAA 72 bp | GCCACCCGGTTTTCTGGCGCTGGGTCATCCACAGGCTaGAGAGCGGCGTGTCGCCGGCCTAGGGATGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATRFSGAGSSTG*RAACRRPRDVV Trigger: CACGACATCCCTAGGCCGGCGACACGCCGCTCTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS GCA 72 bp | AAAAGGCCACCACAGCAACTGGGCTCGCGCACCACATaGTGGGCCAGCAGCTTCAATCGCCTCCGCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRPPQQLGSRTT*WASSFNRLRHP Trigger: CGGGTGGCGGAGGCGATTGAAGCTGCTGGCCCAGCATGTGGTGCGCGAGCCCAGTTGCTGTGGTGGCCTTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS CCA 72 bp | CTAGGGCTTCATGACGGCCACCCGGTTTTCTGGCGCTaGGTCATCCACAGGCTTGAGAGCGGCGTGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGLHDGHPVFWR*VIHRLESGVSP Trigger: CGGCGACACGCCGCTCTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGGGTGGCCGTCATGAAGCCCTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS CCA 72 bp | GCTGGGCTAGGGCTTCATGACGGCCACCCGGTTTTCTaGCGCTGGGTCATCCACAGGCTTGAGAGCGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGLGLHDGHPVF*RWVIHRLESGV Trigger: CACGCCGCTCTCAAGCCTGTGGATGACCCAGCGCCAGAAAACCGGGTGGCCGTCATGAAGCCCTAGCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378442.5 |
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| CDS CCA 72 bp | GACCAAAAGCCCGGCGCAAAAGGCCACCACAGCAACTaGGCTCGCGCACCACATGCTGGGCCAGCAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DQKPGAKGHHSN*ARAPHAGPAAS Trigger: TGAAGCTGCTGGCCCAGCATGTGGTGCGCGAGCCCAGTTGCTGTGGTGGCCTTTTGCGCCGGGCTTTTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465530.2 |
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| CDS CCA 72 bp | ACAAATGTGCTGGCATTGGAGATCAGAGCTCTGTTTTaGGGTGTGTCGCTGCATACTTGGGGGCCAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TNVLALEIRALF*GVSLHTWGPAL Trigger: AAGAGCTGGCCCCCAAGTATGCAGCGACACACCCCAAAACAGAGCTCTGATCTCCAATGCCAGCACATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000378441.6 ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 ENST00000467405.1 |
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| CDS TCA 72 bp | TCTTCATTGCAGGCATATGCACACTCATTGGGCGAGTaGCTTCACTTAGGATCTTTGTGGCTGCGTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLQAYAHSLGE*LHLGSLWLRLL Trigger: CAAAAGACGCAGCCACAAAGATCCTAAGTGAAGTCACTCGCCCAATGAGTGTGCATATGCCTGCAATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 ENST00000467405.1 |
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| CDS GCA 72 bp | TTCTTCAGCTTCTCACAAATCTTCATTGCAGGCATATaGACACTCATTGGGCGAGTGACTTCACTTAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FFSFSQIFIAGI*TLIGRVTSLRI Trigger: GATCCTAAGTGAAGTCACTCGCCCAATGAGTGTGCATATGCCTGCAATGAAGATTTGTGAGAAGCTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 ENST00000467405.1 |
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| CDS TCA 72 bp | AGTGTCCAGCGAAAAGTTAACTCCTCTGTCTATCAGTaGCTTGTAGAATCGGTTCAAGAATTCTTTACATAC | + |
|
Preference number: 6 (lower is better) Translates to: SVQRKVNSSVYQ*LVESVQEFFTY Trigger: GTATGTAAAGAATTCTTGAACCGATTCTACAAGTCACTGATAGACAGAGGAGTTAACTTTTCGCTGGACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378441.6 ENST00000378442.5 ENST00000465530.2 ENST00000466269.1 |
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