Pregenerated sensors for CDKN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000100526Ensembl transcript IDs: ENST00000216414.12, ENST00000335183.11, ENST00000395577.2, ENST00000442975.6, ENST00000458126.6, ENST00000541304.5, ENST00000543789.6, ENST00000555837.5, ENST00000556102.6, ENST00000556305.1, ENST00000611205.4
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACACAAGGACAACACCATGCAAAGACACAGACATCCGAGGAAGTGTGTGATGACAGGCCTGCCATGGATTaGTGGCCACCACCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TQGQHHAKTQTSEEVCDDRPAMD*WPPPEA Trigger: AGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCT...GTCATCACACACTTCCTCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR-3UTR CCA 90 bp | ACACAAGGACAACACCATGCAAAGACACAGACATCCGAGGAAGTGTGTGATGACCAGTCTCAGAGGGCATaGCTCTGCTCTCATCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: TQGQHHAKTQTSEEVCDDQSQRA*LCSHLN Trigger: ATTAAGATGAGAGCAGAGCCATGCCCTCTGAGACTG...GTCATCACACACTTCCTCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGACAACAGGTCAGTGAAAAAGGTTTACCAGATCCTGTTGCTGAAGGATAAGAGCTGTCTAGAAGTGTaGGTCCTCAAAGATGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VDNRSVKKVYQILLLKDKSCLEV*VLKDGR Trigger: TCTGCCATCTTTGAGGACCCACACTTCTAGACAGCT...CTTATCCTTCAGCAACAGGATCTGGTAAACCTTTTTCACTGACCTGTTGTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGGACCTTATTCAGAATTTGAGTCTTTGCAGGTATATTCAAGTTAAGACGGGCCCTCATCCTAGATaGCTAGTGTCCTTACACAAG | + |
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Preference number: 2 (lower is better) Translates to: EWDLIQNLSLCRYIQVKTGPHPR*LVSLHK Trigger: CTTGTGTAAGGACACTAGTCATCTAGGATGAGGGCC...CGTCTTAACTTGAATATACCTGCAAAGACTCAAATTCTGAATAAGGTCCCACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTTACACAAGGACAACACCATGCAAAGACACAGACATCCGAGGAAGTGTTTGTTTTCAGCTACCTaGTTTGTGGTACTTTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VSLHKDNTMQRHRHPRKCLFSAT*FVVLCY Trigger: GTAACAAAGTACCACAAACCAGGTAGCTGAAAACAA...ACACTTCCTCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGTGTAAGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR CAA 90 bp | ACTCTCCTCAGTCTCAGAGGGCATGGCTCTGCTCTCATCTTAATTTaGGACTTACATCCTCTAGAAATGGGAAAGAAGAAATTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TLLSLRGHGSALILI*DLHPLEMGKKKFLL Trigger: CAACAGAAATTTCTTCTTTCCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCTCTGAGACTGAGGAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGCATGGCTCTGCTCTCATCTTAATTTTGGACTTACATCCTCTAGAAATGGGAATTTTATAAAGGGCTaGAAATGTCCAGGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: RAWLCSHLNFGLTSSRNGNFIKG*KCPGRT Trigger: GGTTCTGCCTGGACATTTGCAGCCCTTTATAAAATT...CCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR CCA 72 bp | GACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATaGATTGATGGCCACCACCAGAAGCTAGGAAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: DWRDSAASQGLP*IDGHHQKLGRG Trigger: GCCTCTTCCTAGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR TCA 72 bp | GAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTaGTGGCCACCACCAGAAGCTAGGAAGAGGCATGGA | + |
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Preference number: 3 (lower is better) Translates to: EGFSCKPRPAMD*WPPPEARKRHG Trigger: TCCATGCCTCTTCCTAGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR CCA 72 bp | AGACATCCGAGGAAGTGTGTGATGACAGAGGCAGACTaGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGG | + |
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Preference number: 3 (lower is better) Translates to: RHPRKCVMTEAD*RDSAASQGLPW Trigger: CCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTCTGTCATCACACACTTCCTCGGATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR TCA 72 bp | TTTTATAAAGGGCTGCAAATGTCCAGGCAGAACCAGTaGGACAGCACTGGTAGACAACAGGTCAGTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: FYKGLQMSRQNQ*DSTGRQQVSEK Trigger: TTTTTCACTGACCTGTTGTCTACCAGTGCTGTCTCACTGGTTCTGCCTGGACATTTGCAGCCCTTTATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR CCA 90 bp | GAGGCAGACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTGATGGCGGGCGGCTTCATCGCTaGCCGCCCCACGTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EADWRDSAASQGLPWIDGGRLHR*PPHVET Trigger: GGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGCCC...GCCATCAATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | ATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATAGTGCCGCCTCCCTCTaGAGCGCCGGCGACTCACCG | + |
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Preference number: 4 (lower is better) Translates to: IAPDPLRSRRLSMACSGDSAASL*SAGDSP Trigger: CGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACT...ATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR CCA 90 bp | ATGGTCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCGGGCGGCTTCATCGCTaGCCGCCCCACGTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: MVCIAPDPLRSRRLSMACGRLHR*PPHVET Trigger: GGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGCCC...GCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR GCA 90 bp | GCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATTCCACGTCGAGACCAGTaGCGCCTCCCTCTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: APDPLRSRRLSMACSGDIPRRDQ*RLPLQR Trigger: GCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGG...AATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR GCA 90 bp | AGCCAAGGCCTGCCATGGATTGATGGCCACCACCAGAAGCTAGGAAGAGGCATGCTGCAAGCCAAGGCCTaGCATGGATTGATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SQGLPWIDGHHQKLGRGMLQAKA*HGLMAT Trigger: GGTGGCCATCAATCCATGGCAGGCCTTGGCTTGCAG...CATGCCTCTTCCTAGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCTTGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR CCA 90 bp | GAGGCAGACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTGATGGCTTATTTCACAGCAGCTaGCTATGTCAGGAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: EADWRDSAASQGLPWIDGLFHSS*LCQESL Trigger: GAGGGACTCCTGACATAGCCAGCTGCTGTGAAATAA...GCCATCAATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR TCA 90 bp | TCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGCTCACTTGTTTGTATTaGACTGGGCGGCTTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: SVLPRILLGLAGCLWLALLTCLY*TGRLHR Trigger: GCGATGAAGCCGCCCAGTTCAATACAAACAAGTGAG...CAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR GCA 90 bp | ATGACAGAGGCAGACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTAGGAGTCCCTCCATCTaGGATTGGATGATGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: MTEADWRDSAASQGLPWIRSPSI*DWMMMG Trigger: ACCCATCATCATCCAATCGCAGATGGAGGGACTCCT...AATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | ATGGTCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCAGGAGTCCCTCCATCTaGGATTGGATGATGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: MVCIAPDPLRSRRLSMACRSPSI*DWMMMG Trigger: ACCCATCATCATCCAATCGCAGATGGAGGGACTCCT...GCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR CCA 90 bp | TGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTCTCGCAGGCTGTCTATaGCTTGCTCTGGTGATATTG | + |
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Preference number: 4 (lower is better) Translates to: CIAPDPLRSRRLSMACSGLAGCL*LALVIL Trigger: CAATATCACCAGAGCAAGCCATAGACAGCCTGCGAG...ACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR CCA 90 bp | GTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGTTATTTCACAGCAGCTaGCTATGTCAGGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPRILLGLAGCLWLALVLFHSS*LCQESL Trigger: GAGGGACTCCTGACATAGCCAGCTGCTGTGAAATAA...CACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | TCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGTATGGCTTGCTCTGGTaGTATTGTGTCAGACAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SVLPRILLGLAGCLWLALYGLLW*YCVRQV Trigger: TACCTGTCTGACACAATATCACCAGAGCAAGCCATA...CAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | CCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATTGTGTGGGACTCTATATTTTaGCAGTTCCCCTCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PDPLRSRRLSMACSGDIVWDSIF*QFPSGA Trigger: TGCACCAGAGGGGAACTGTCAAAATATAGAGTCCCA...CACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR GCA 90 bp | ATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTAGTGCCGCCTCCCTCTaGAGCGCCGGCGACTCACCG | + |
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Preference number: 4 (lower is better) Translates to: ILIVNLLMIDVQLICPETSAASL*SAGDSP Trigger: CGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACT...AGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR CCA 90 bp | TTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATACCCTCCATCTGCGATTaGATGATGATGGGTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: LPRILLGLAGCLWLALVIPSICD*MMMGDN Trigger: ATTATCACCCATCATCATCCAATCGCAGATGGAGGG...TATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | ATGGTCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCCATAAACCGAGAAACTaGGAACAATTCACTCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: MVCIAPDPLRSRRLSMACHKPRN*EQFTRD Trigger: GTCACGAGTGAATTGTTCTCAGTTTCTCGGTTTATG...GCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | AGGGCATGGCTCTGCTCTCATCTTAATTTTGGACTTACATCCTCTAGAAATGGGAGGCCTGCCATGGATTaGTGGCCACCACCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RAWLCSHLNFGLTSSRNGRPAMD*WPPPEA Trigger: AGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCT...CCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | CCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATTGTGAGGCTGTCTATGGCTTaGTCTGGTGATATTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PDPLRSRRLSMACSGDIVRLSMA*SGDIVS Trigger: TGACACAATATCACCAGAGCAAGCCATAGACAGCCT...CACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR CCA 90 bp | CTTGATACAGATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGGGGCGGCTTCATCGCTaGCCGCCCCACGTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LDTDLDCESLDDRCAANLGRLHR*PPHVET Trigger: GGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGCCC...CAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATCTGTATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR CCA 90 bp | GTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGTTGACAGTTCCCCTCTaGTGCAGAAAACAAATATGT | + |
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Preference number: 4 (lower is better) Translates to: VLPRILLGLAGCLWLALVLTVPL*CRKQIC Trigger: ACATATTTGTTTTCTGCACCAGAGGGGAACTGTCAA...CACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | GTGTCCTTACACAAGGACAACACCATGCAAAGACACAGACATCCGAGGAAGTGTCTCACTTGTTTGTATTaGACTGGGCGGCTTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: VSLHKDNTMQRHRHPRKCLTCLY*TGRLHR Trigger: GCGATGAAGCCGCCCAGTTCAATACAAACAAGTGAG...ACACTTCCTCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGTGTAAGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | ATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATACAGTTCCCCTCTGGTaGAGAAAACAAATATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: IAPDPLRSRRLSMACSGDTVPLW*RKQICL Trigger: AAGACATATTTGTTTTCTGCACCAGAGGGGAACTGT...ATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR TCA 90 bp | TGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATAGCCATGATATATaGATTGGAGTCTGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: CIAPDPLRSRRLSMACSGDSHDI*IGVCSS Trigger: AGATGAACAGACTCCAATTCATATATCATGGCTATC...ACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS-3UTR CCA 90 bp | ATGACAGAGGCAGACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTTTGTTTTCAGCTACCTaGTTTGTGGTACTTTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: MTEADWRDSAASQGLPWILFSAT*FVVLCY Trigger: GTAACAAAGTACCACAAACCAGGTAGCTGAAAACAA...AATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTCTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR TCA 90 bp | CTGAAGGATAAGCTCTATAGCTGTCTAGAAGTGTGGGTCCTCAAAGATGGCAGATGGGACTCTATATTTTaGCAGTTCCCCTCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LKDKLYSCLEVWVLKDGRWDSIF*QFPSGA Trigger: TGCACCAGAGGGGAACTGTCAAAATATAGAGTCCCA...TCTGCCATCTTTGAGGACCCACACTTCTAGACAGCTATAGAGCTTATCCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR TCA 90 bp | GTAGACAACAGGTCAGTGAAAAAGGTTTACCAGATCCTGTTGCTGAAGGATAAGGGCCCTCATCCTAGATaGCTAGTGTCCTTACACAAG | + |
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Preference number: 4 (lower is better) Translates to: VDNRSVKKVYQILLLKDKGPHPR*LVSLHK Trigger: CTTGTGTAAGGACACTAGTCATCTAGGATGAGGGCC...CTTATCCTTCAGCAACAGGATCTGGTAAACCTTTTTCACTGACCTGTTGTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR CCA 90 bp | GATAAGCTCTATAGCTGTCTAGAAGTGTGGGTCCTCAAAGATGGCAGAATGGATCAGTCTCAGAGGGCATaGCTCTGCTCTCATCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: DKLYSCLEVWVLKDGRMDQSQRA*LCSHLN Trigger: ATTAAGATGAGAGCAGAGCCATGCCCTCTGAGACTG...ATCCATTCTGCCATCTTTGAGGACCCACACTTCTAGACAGCTATAGAGCTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | AGGGCATGGCTCTGCTCTCATCTTAATTTTGGACTTACATCCTCTAGAAATGGGCAGAGGGCATGGCTCTaGTCTCATCTTAATTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RAWLCSHLNFGLTSSRNGQRAWL*SHLNFG Trigger: TCCAAAATTAAGATGAGAGCAGAGCCATGCCCTCTG...CCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR TCA 90 bp | GATAAGCTCTATAGCTGTCTAGAAGTGTGGGTCCTCAAAGATGGCAGAATGGATCATAAACCGAGAAACTaGGAACAATTCACTCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: DKLYSCLEVWVLKDGRMDHKPRN*EQFTRD Trigger: GTCACGAGTGAATTGTTCTCAGTTTCTCGGTTTATG...ATCCATTCTGCCATCTTTGAGGACCCACACTTCTAGACAGCTATAGAGCTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR TCA 90 bp | TTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATCTCACTTGTTTGTATTaGACTGGGCGGCTTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: LIVNLLMIDVQLICPETHLTCLY*TGRLHR Trigger: GCGATGAAGCCGCCCAGTTCAATACAAACAAGTGAG...ATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR GCA 90 bp | AGGGCATGGCTCTGCTCTCATCTTAATTTTGGACTTACATCCTCTAGAAATGGGACAGTTCCCCTCTGGTaGAGAAAACAAATATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RAWLCSHLNFGLTSSRNGTVPLW*RKQICL Trigger: AAGACATATTTGTTTTCTGCACCAGAGGGGAACTGT...CCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| CDS-3UTR GCA 90 bp | ATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTAGGAGTCCCTCCATCTaGGATTGGATGATGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILIVNLLMIDVQLICPETRSPSI*DWMMMG Trigger: ACCCATCATCATCCAATCGCAGATGGAGGGACTCCT...AGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR CCA 90 bp | TTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATCTCGCAGGCTGTCTATaGCTTGCTCTGGTGATATTG | + |
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Preference number: 4 (lower is better) Translates to: LIVNLLMIDVQLICPETHLAGCL*LALVIL Trigger: CAATATCACCAGAGCAAGCCATAGACAGCCTGCGAG...ATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR CCA 90 bp | GATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTTATTTCACAGCAGCTaGCTATGTCAGGAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DLDCESLDDRCAANLSRNLFHSS*LCQESL Trigger: GAGGGACTCCTGACATAGCCAGCTGCTGTGAAATAA...GTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
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| CDS-3UTR CCA 90 bp | GTAGACAACAGGTCAGTGAAAAAGGTTTACCAGATCCTGTTGCTGAAGGATAAGCAGCTACCTGGTTTGTaGTACTTTGTTACAATAGCC | + |
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Preference number: 4 (lower is better) Translates to: VDNRSVKKVYQILLLKDKQLPGL*YFVTIA Trigger: GGCTATTGTAACAAAGTACCACAAACCAGGTAGCTG...CTTATCCTTCAGCAACAGGATCTGGTAAACCTTTTTCACTGACCTGTTGTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541304.5 |
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| 3UTR CAA 72 bp | AGTCTCAGAGGGCATGGCTCTGCTCTCATCTTAATTTaGGACTTACATCCTCTAGAAATGGGAAAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRGHGSALILI*DLHPLEMGKKK Trigger: TTTCTTCTTTCCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCTCTGAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR TCA 90 bp | AGGGCATGGCTCTGCTCTCATCTTAATTTTGGACTTACATCCTCTAGAAATGGGGATAGCCATGATATATaGATTGGAGTCTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RAWLCSHLNFGLTSSRNGDSHDI*IGVCSS Trigger: AGATGAACAGACTCCAATTCATATATCATGGCTATC...CCCATTTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGCAGAGCCATGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR TCA 90 bp | ATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTTGGGACTCTATATTTTaGCAGTTCCCCTCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILIVNLLMIDVQLICPETWDSIF*QFPSGA Trigger: TGCACCAGAGGGGAACTGTCAAAATATAGAGTCCCA...AGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR GCA 90 bp | GATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACAGGCTGTCTATGGCTTaGTCTGGTGATATTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLDCESLDDRCAANLSRNRLSMA*SGDIVS Trigger: TGACACAATATCACCAGAGCAAGCCATAGACAGCCT...GTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CCA 90 bp | TACAATAGCCCCAAGAAACTACAAAATACAGTAGGCAAGCAGTGTTGTTCACTACCCTCCATCTGCGATTaGATGATGATGGGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNSPKKLQNTVGKQCCSLPSICD*MMMGDN Trigger: ATTATCACCCATCATCATCCAATCGCAGATGGAGGG...TAGTGAACAACACTGCTTGCCTACTGTATTTTGTAGTTTCTTGGGGCTATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGTTTGTGGTACTTTGTTACAATAGCCCCAAGAAACTACAAAATACAGTAAGCTGTCTAGAAGTGTaGGTCCTCAAAGATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWFVVLCYNSPKKLQNTVSCLEV*VLKDGR Trigger: TCTGCCATCTTTGAGGACCCACACTTCTAGACAGCT...TACTGTATTTTGTAGTTTCTTGGGGCTATTGTAACAAAGTACCACAAACCAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR TCA 90 bp | CTTGATACAGATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGGACTGGGGCAAAAACTaGGAAGTAGGTAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDTDLDCESLDDRCAANLDWGKN*EVGRSL Trigger: CAAGGATCTACCTACTTCTCAGTTTTTGCCCCAGTC...CAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATCTGTATCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR TCA 90 bp | ATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTTCTCATTGTCCTAGGTaGGAGGATCCATTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILIVNLLMIDVQLICPETSHCPR*EDPFPK Trigger: TTTTGGGAATGGATCCTCTCACCTAGGACAATGAGA...AGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGGTTTGTGGTACTTTGTTACAATAGCCCCAAGAAACTACAAAATACAGTAACAAGGACAACACCATaGAAAGACACAGACATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TWFVVLCYNSPKKLQNTVTRTTP*KDTDIR Trigger: TCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGT...TACTGTATTTTGTAGTTTCTTGGGGCTATTGTAACAAAGTACCACAAACCAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CCA 90 bp | TACAATAGCCCCAAGAAACTACAAAATACAGTAGGCAAGCAGTGTTGTTCACTATCCTGTACCTGTGAGTaGGACCTTATTCAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YNSPKKLQNTVGKQCCSLSCTCE*DLIQNL Trigger: CAAATTCTGAATAAGGTCCCACTCACAGGTACAGGA...TAGTGAACAACACTGCTTGCCTACTGTATTTTGTAGTTTCTTGGGGCTATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATAATTATGGCTTGCTCTGGTaGTATTGTGTCAGACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLLMIDVQLICPETHEDNYGLLW*YCVRQV Trigger: TACCTGTCTGACACAATATCACCAGAGCAAGCCATA...ATTATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGACCTTATTCAGAATTTGAGTCTTTGCAGGTATATTCAAGTTAAGACGTTGACAGTTCCCCTCTaGTGCAGAAAACAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: EWDLIQNLSLCRYIQVKTLTVPL*CRKQIC Trigger: ACATATTTGTTTTCTGCACCAGAGGGGAACTGTCAA...CGTCTTAACTTGAATATACCTGCAAAGACTCAAATTCTGAATAAGGTCCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CCA 90 bp | AATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATAATCCCTCCATCTGCGATTaGATGATGATGGGTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLLMIDVQLICPETHEDNPSICD*MMMGDN Trigger: ATTATCACCCATCATCATCCAATCGCAGATGGAGGG...ATTATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR GCA 90 bp | TTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATACAGTTCCCCTCTGGTaGAGAAAACAAATATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVNLLMIDVQLICPETHTVPLW*RKQICL Trigger: AAGACATATTTGTTTTCTGCACCAGAGGGGAACTGT...ATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGGTTTGTGGTACTTTGTTACAATAGCCCCAAGAAACTACAAAATACAGTAAATTTTATAAAGGGCTaGAAATGTCCAGGCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TWFVVLCYNSPKKLQNTVNFIKG*KCPGRT Trigger: GGTTCTGCCTGGACATTTGCAGCCCTTTATAAAATT...TACTGTATTTTGTAGTTTCTTGGGGCTATTGTAACAAAGTACCACAAACCAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| 3UTR CAA 72 bp | TTATCCTGTACCTGTGAGTGGGACCTTATTCAGAATTaGAGTCTTTGCAGGTATATTCAAGTTAAGACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSCTCEWDLIQN*SLCRYIQVKTN Trigger: ATTCGTCTTAACTTGAATATACCTGCAAAGACTCAAATTCTGAATAAGGTCCCACTCACAGGTACAGGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CCA 90 bp | AATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATAATTTGACAGTTCCCCTCTaGTGCAGAAAACAAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLMIDVQLICPETHEDNLTVPL*CRKQIC Trigger: ACATATTTGTTTTCTGCACCAGAGGGGAACTGTCAA...ATTATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATAATGATAGCCATGATATATaGATTGGAGTCTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NLLMIDVQLICPETHEDNDSHDI*IGVCSS Trigger: AGATGAACAGACTCCAATTCATATATCATGGCTATC...ATTATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS GCA 90 bp | CTTCATCGCTGGCCGCCCCACGTCGAGACCAGTGCCGCCTCCCTCTaGAGCGCCGGCGACTCACCGGTGCCCCGGCCGAGCCCGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHRWPPHVETSAASL*SAGDSPVPRPSPRP Trigger: GGGGCGCGGGCTCGGCCGGGGCACCGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGGGGCGGCCAGCGATGAAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000543789.6 ENST00000555837.5 ENST00000611205.4 |
||
| CDS GCA 90 bp | TTGAACTGGGCGGCTTCATCGCTGGCCGCCCCACGTCGAGACCAGTaGCGCCTCCCTCTGCAGCGCCGGCGACTCACCGGTGCCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNWAASSLAAPRRDQ*RLPLQRRRLTGAPA Trigger: GGCCGGGGCACCGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGCCCAGTTCAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000442975.6 ENST00000543789.6 ENST00000611205.4 |
||
| CDS TCA 90 bp | GCCGAGCCCGCGCCCCGCAGCTTAGCTCACTGGTTCGTCCTTCTGTaGGGTGGGCGCGGCGTCTTCCAGCAACCAATCAGATCCGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEPAPRSLAHWFVLL*GGRGVFQQPIRSAS Trigger: AGAAGCGGATCTGATTGGTTGCTGGAAGACGCCGCGCCCACCTCACAGAAGGACGAACCAGTGAGCTAAGCTGCGGGGCGCGGGCTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555837.5 |
||
| CDS CCA 90 bp | GCCCGCGCCCCGCAGCTTAGCTCACTGGTTCGTCCTTCTGTGAGGTaGGCGCGGCGTCTTCCAGCAACCAATCAGATCCGCTTCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARAPQLSSLVRPSVR*ARRLPATNQIRFWF Trigger: AAACCAGAAGCGGATCTGATTGGTTGCTGGAAGACGCCGCGCCCACCTCACAGAAGGACGAACCAGTGAGCTAAGCTGCGGGGCGCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555837.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGTTGGGACTCTATATTTaGACAGTTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLPRILLGLAGCLWLALLGLYI*TVPLWC Trigger: GCACCAGAGGGGAACTGTCAAAATATAGAGTCCCAA...CAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543789.6 |
||
| CDS-3UTR CAA 90 bp | GTGTCCTTACACAAGGACAACACCATGCAAAGACACAGACATCCGAGGAAGTGTAAGGCCTGCCATGGATaGATGGCCACCACCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLHKDNTMQRHRHPRKCKACHG*MATTRS Trigger: GCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCTT...ACACTTCCTCGGATGTCTGTGTCTTTGCATGGTGTTGTCCTTGTGTAAGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | ATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATGGTGATAATTCCACATaGCTGGTAGAGATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IAPDPLRSRRLSMACSGDGDNST*LVEIQK Trigger: CTTCTGGATCTCTACCAGCAATGTGGAATTATCACC...ATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
||
| CDS GCA 90 bp | TGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTaGTCTGGTGATATTGTGTCAGACAGGTATAGTAGGAGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CIAPDPLRSRRLSMA*SGDIVSDRYSRRQA Trigger: TGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000216414.12 ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
||
| CDS-3UTR CAA 90 bp | CCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATTGTGATGAGTCAAACTCACTaGTTTGTATTGAACTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PDPLRSRRLSMACSGDIVMSQTH*FVLNWA Trigger: CGCCCAGTTCAATACAAACAAGTGAGTTTGACTCAT...CACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543789.6 |
||
| CDS-3UTR CAA 90 bp | AGCCAAGGCCTGCCATGGATTGATGGCCACCACCAGAAGCTAGGAAGAGGCATGGCTCTCATCTTAATTTaGGACTTACATCCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQGLPWIDGHHQKLGRGMALILI*DLHPLE Trigger: TTCTAGAGGATGTAAGTCCAAAATTAAGATGAGAGC...CATGCCTCTTCCTAGCTTCTGGTGGTGGCCATCAATCCATGGCAGGCCTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS CCA 90 bp | TATTTCACAGCAGCTGGCTATGTCAGGAGTCCCTCCATCTGCGATTaGATGATGATGGGTGATAATTCCACATTGCTGGTAGAGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YFTAAGYVRSPSICD*MMMGDNSTLLVEIQ Trigger: CTGGATCTCTACCAGCAATGTGGAATTATCACCCATCATCATCCAATCGCAGATGGAGGGACTCCTGACATAGCCAGCTGCTGTGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
||
| CDS-3UTR CAA 90 bp | GTCTGTATTGCCCCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGCCATGATATATGAATaGGAGTCTGTTCATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VCIAPDPLRSRRLSMACSAMIYE*ESVHLQ Trigger: TTGAAGATGAACAGACTCCAATTCATATATCATGGC...AGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGGGGCAATACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543789.6 |
||
| CDS-3UTR CAA 90 bp | ATGACAGAGGCAGACTGGAGGGATTCAGCTGCAAGCCAAGGCCTGCCATGGATTTTTCAGCTACCTGGTTaGTGGTACTTTGTTACAATA | + |
|
Preference number: 5 (lower is better) Translates to: MTEADWRDSAASQGLPWIFQLPG*WYFVTI Trigger: TATTGTAACAAAGTACCACAAACCAGGTAGCTGAAA...AATCCATGGCAGGCCTTGGCTTGCAGCTGAATCCCTCCAGTCTGCCTCTGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS GCA 90 bp | TTCCATTATTTCACAGCAGCTGGCTATGTCAGGAGTCCCTCCATCTaGGATTGGATGATGATGGGTGATAATTCCACATTGCTGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHYFTAAGYVRSPSI*DWMMMGDNSTLLVE Trigger: CTCTACCAGCAATGTGGAATTATCACCCATCATCATCCAATCGCAGATGGAGGGACTCCTGACATAGCCAGCTGCTGTGAAATAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
||
| CDS-3UTR CAA 90 bp | GTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATGAAGTAGGTAGATCCTaGATGGTCTGTATTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VNLLMIDVQLICPETHEDEVGRS*MVCIAP Trigger: CGGGGCAATACAGACCATCAAGGATCTACCTACTTC...ATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CAA 90 bp | TACAATAGCCCCAAGAAACTACAAAATACAGTAGGCAAGCAGTGTTGTTCACTAACTCACTTGTTTGTATaGAACTGGGCGGCTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: YNSPKKLQNTVGKQCCSLTHLFV*NWAASS Trigger: CGATGAAGCCGCCCAGTTCAATACAAACAAGTGAGT...TAGTGAACAACACTGCTTGCCTACTGTATTTTGTAGTTTCTTGGGGCTATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGACCTTATTCAGAATTTGAGTCTTTGCAGGTATATTCAAGTTAAGACGTTGGGACTCTATATTTaGACAGTTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EWDLIQNLSLCRYIQVKTLGLYI*TVPLWC Trigger: GCACCAGAGGGGAACTGTCAAAATATAGAGTCCCAA...CGTCTTAACTTGAATATACCTGCAAAGACTCAAATTCTGAATAAGGTCCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | GATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTTGGGACTCTATATTTaGACAGTTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DLDCESLDDRCAANLSRNLGLYI*TVPLWC Trigger: GCACCAGAGGGGAACTGTCAAAATATAGAGTCCCAA...GTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CAA 90 bp | GATAAGCTCTATAGCTGTCTAGAAGTGTGGGTCCTCAAAGATGGCAGAATGGATGCCATGATATATGAATaGGAGTCTGTTCATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DKLYSCLEVWVLKDGRMDAMIYE*ESVHLQ Trigger: TTGAAGATGAACAGACTCCAATTCATATATCATGGC...ATCCATTCTGCCATCTTTGAGGACCCACACTTCTAGACAGCTATAGAGCTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | CTACCTGGTTTGTGGTACTTTGTTACAATAGCCCCAAGAAACTACAAAATACAGGGTGATAATTCCACATaGCTGGTAGAGATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGLWYFVTIAPRNYKIQGDNST*LVEIQK Trigger: CTTCTGGATCTCTACCAGCAATGTGGAATTATCACC...CTGTATTTTGTAGTTTCTTGGGGCTATTGTAACAAAGTACCACAAACCAGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | CTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCAGGTGATAATTCCACATaGCTGGTAGAGATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDCESLDDRCAANLSRNSGDNST*LVEIQK Trigger: CTTCTGGATCTCTACCAGCAATGTGGAATTATCACC...TGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CAA 90 bp | ACCTGGTTTGTGGTACTTTGTTACAATAGCCCCAAGAAACTACAAAATACAGTAATGAGTCAAACTCACTaGTTTGTATTGAACTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TWFVVLCYNSPKKLQNTVMSQTH*FVLNWA Trigger: CGCCCAGTTCAATACAAACAAGTGAGTTTGACTCAT...TACTGTATTTTGTAGTTTCTTGGGGCTATTGTAACAAAGTACCACAAACCAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541304.5 |
||
| CDS-3UTR CAA 90 bp | ATACAGATCTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCATGAGTCAAACTCACTaGTTTGTATTGAACTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IQILIVNLLMIDVQLICPMSQTH*FVLNWA Trigger: CGCCCAGTTCAATACAAACAAGTGAGTTTGACTCAT...GGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATCTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CAA 90 bp | CTTGATTGTGAATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATTGATTGTGAATCTCTaGATGATAGATGTGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LDCESLDDRCAANLSRNSLIVNL*MIDVQL Trigger: TAGCTGCACATCTATCATCAAGAGATTCACAATCAA...TGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS-3UTR CAA 90 bp | AATCTCTTGATGATAGATGTGCAGCTAATTTGTCCCGAAACTCATGAAGATAATGCCATGATATATGAATaGGAGTCTGTTCATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NLLMIDVQLICPETHEDNAMIYE*ESVHLQ Trigger: TTGAAGATGAACAGACTCCAATTCATATATCATGGC...ATTATCTTCATGAGTTTCGGGACAAATTAGCTGCACATCTATCATCAAGAGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556102.6 |
||
| CDS GCA 72 bp | TGGCCGCCCCACGTCGAGACCAGTGCCGCCTCCCTCTaGAGCGCCGGCGACTCACCGGTGCCCCGGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPPHVETSAASL*SAGDSPVPRPS Trigger: GCTCGGCCGGGGCACCGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGGGGCGGCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000543789.6 ENST00000555837.5 ENST00000611205.4 |
||
| CDS GCA 72 bp | GCGGCTTCATCGCTGGCCGCCCCACGTCGAGACCAGTaGCGCCTCCCTCTGCAGCGCCGGCGACTCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AASSLAAPRRDQ*RLPLQRRRLTG Trigger: ACCGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000335183.11 ENST00000442975.6 ENST00000458126.6 ENST00000543789.6 ENST00000556102.6 ENST00000611205.4 |
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| CDS GCA 72 bp | CCGGCTTCATCGCTGGCCGCCCCACGTCGAGACCAGTaGCGCCTCCCTCTGCAGCGCCGGCGACTCACCGGT | + |
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Preference number: 6 (lower is better) Translates to: PASSLAAPRRDQ*RLPLQRRRLTG Trigger: ACCGGTGAGTCGCCGGCGCTGCAGAGGGAGGCGGCACTGGTCTCGACGTGGGGCGGCCAGCGATGAAGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS TCA 72 bp | GCGCCCCGCAGCTTAGCTCACTGGTTCGTCCTTCTGTaGGGTGGGCGCGGCGTCTTCCAGCAACCAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: APRSLAHWFVLL*GGRGVFQQPIR Trigger: TCTGATTGGTTGCTGGAAGACGCCGCGCCCACCTCACAGAAGGACGAACCAGTGAGCTAAGCTGCGGGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS CCA 72 bp | CCGCAGCTTAGCTCACTGGTTCGTCCTTCTGTGAGGTaGGCGCGGCGTCTTCCAGCAACCAATCAGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: PQLSSLVRPSVR*ARRLPATNQIR Trigger: GCGGATCTGATTGGTTGCTGGAAGACGCCGCGCCCACCTCACAGAAGGACGAACCAGTGAGCTAAGCTGCGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS CCA 72 bp | GCGCGGCGTCTTCCAGCAACCAATCAGATCCGCTTCTaGTTTCTTACTCCGCCTTTGGGTGGCCGAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: ARRLPATNQIRF*FLTPPLGGRRL Trigger: GAGTCTTCGGCCACCCAAAGGCGGAGTAAGAAACCAGAAGCGGATCTGATTGGTTGCTGGAAGACGCCGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS CCA 72 bp | TCAGATCCGCTTCTGGTTTCTTACTCCGCCTTTGGGTaGCCGAAGACTCGGCCTCTAATCGCTGACTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SDPLLVSYSAFG*PKTRPLIADWF Trigger: GAACCAGTCAGCGATTAGAGGCCGAGTCTTCGGCCACCCAAAGGCGGAGTAAGAAACCAGAAGCGGATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS GCA 72 bp | CCGGATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTaGTCTGGTGATATTGTGTCAGACAGGTATAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PDPLRSRRLSMA*SGDIVSDRYSR Trigger: CCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGATCCGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000216414.12 ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CCA 72 bp | GCAGCTGGCTATGTCAGGAGTCCCTCCATCTGCGATTaGATGATGATGGGTGATAATTCCACATTGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: AAGYVRSPSICD*MMMGDNSTLLV Trigger: TACCAGCAATGTGGAATTATCACCCATCATCATCCAATCGCAGATGGAGGGACTCCTGACATAGCCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CAA 72 bp | GGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: GLAGCLWLALVI*CQTGIVGDKQL Trigger: TAGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000216414.12 ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CAA 72 bp | GGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GLAGCLWLALVI*CQTGIVGDKQQ Trigger: TTGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458126.6 |
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| CDS CAA 90 bp | ATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCTACTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ILLGLAGCLWLALVI*CQTGIVGDKQLLEE Trigger: CTCTTCCAGTAGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216414.12 |
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| CDS GCA 72 bp | TTCACAGCAGCTGGCTATGTCAGGAGTCCCTCCATCTaGGATTGGATGATGATGGGTGATAATTCCACATTG | + |
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Preference number: 6 (lower is better) Translates to: FTAAGYVRSPSI*DWMMMGDNSTL Trigger: CAATGTGGAATTATCACCCATCATCATCCAATCGCAGATGGAGGGACTCCTGACATAGCCAGCTGCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CAA 90 bp | ATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCTACAAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: ILLGLAGCLWLALVI*CQTGIVGDKQLQDK Trigger: CTTGTCTTGTAGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CAA 90 bp | ATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCAAGACAAGATC | + |
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Preference number: 6 (lower is better) Translates to: ILLGLAGCLWLALVI*CQTGIVGDKQQDKI Trigger: GATCTTGTCTTGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458126.6 |
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| CDS CAA 90 bp | ATCCTCTTAGGTCTCGCAGGCTGTCTATGGCTTGCTCTGGTGATATaGTGTCAGACAGGTATAGTAGGAGACAAGCAGCTATGTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: ILLGLAGCLWLALVI*CQTGIVGDKQLCIK Trigger: CTTAATACATAGCTGCTTGTCTCCTACTATACCTGTCTGACACAATATCACCAGAGCAAGCCATAGACAGCCTGCGAGACCTAAGAGGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543789.6 |
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| CDS TCA 72 bp | CAAGCAGCTACTGGAAGAGCACATAAACCGAGAAACTaGGAACAATTCACTCGTGACAAAGATAGCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: QAATGRAHKPRN*EQFTRDKDSHD Trigger: ATCATGGCTATCTTTGTCACGAGTGAATTGTTCTCAGTTTCTCGGTTTATGTGCTCTTCCAGTAGCTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216414.12 |
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| CDS CAA 72 bp | GCTGGTAGAGATCCAGAAGGTTTGGGACTCTATATTTaGACAGTTCCCCTCTGGTGCAGAAAACAAATATGT | + |
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Preference number: 6 (lower is better) Translates to: AGRDPEGLGLYI*TVPLWCRKQIC Trigger: ACATATTTGTTTTCTGCACCAGAGGGGAACTGTCAAAATATAGAGTCCCAAACCTTCTGGATCTCTACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS CAA 72 bp | ATCTGCGATTGGATGATGATGGGTGATAATTCCACATaGCTGGTAGAGATCCAGAAGGTTTGGGACTCTATA | + |
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Preference number: 6 (lower is better) Translates to: ICDWMMMGDNST*LVEIQKVWDSI Trigger: TATAGAGTCCCAAACCTTCTGGATCTCTACCAGCAATGTGGAATTATCACCCATCATCATCCAATCGCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS TCA 72 bp | AATTTACAACCTGGAAGAGCACATAAACCGAGAAACTaGGAACAATTCACTCGTGACAAAGATAGCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: NLQPGRAHKPRN*EQFTRDKDSRL Trigger: AAGCCGGCTATCTTTGTCACGAGTGAATTGTTCTCAGTTTCTCGGTTTATGTGCTCTTCCAGGTTGTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555837.5 |
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| CDS CAA 90 bp | TTCCACATTGCTGGTAGAGATCCAGAAGGTTTGGGACTCTATATTTaGACAGTTCCCCTCTGGTGCAGAAAACAAATATGTCTTGTATAC | + |
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Preference number: 6 (lower is better) Translates to: FHIAGRDPEGLGLYI*TVPLWCRKQICLVY Trigger: GTATACAAGACATATTTGTTTTCTGCACCAGAGGGGAACTGTCAAAATATAGAGTCCCAAACCTTCTGGATCTCTACCAGCAATGTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000335183.11 ENST00000395577.2 ENST00000442975.6 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000555837.5 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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| CDS TCA 72 bp | AATTTACAACCTGGAAGAGCACATAAACCGAGAAACTaGGAACAATTCACTCGTGACAAAGATAGCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: NLQPGRAHKPRN*EQFTRDKDSHD Trigger: ATCATGGCTATCTTTGTCACGAGTGAATTGTTCTCAGTTTCTCGGTTTATGTGCTCTTCCAGGTTGTAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000335183.11 ENST00000458126.6 ENST00000541304.5 ENST00000543789.6 ENST00000556102.6 ENST00000556305.1 ENST00000611205.4 |
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