RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKN2C (Homo sapiens)

Ensembl gene IDs: ENSG00000123080

Ensembl transcript IDs: ENST00000262662.5, ENST00000371761.4, ENST00000396148.2

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCGAGAAGCCCGTCATaGCGGCCCCGCCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPRSPS*RPRQVP
Trigger: CGGGACCTGGCGGGGCCGGCATGACGGGCTTCTCGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGCCGCCAGCCAGCTGTaGCCTGGAGCAGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPAASQL*PGAEPG
Trigger: GCCAGGCTCTGCTCCAGGGCACAGCTGGCTGGCGGC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCGGCCTGTGCCCCTTTaGTGCGGACAGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPRPVPL*CGQGSR
Trigger: GCGGCTGCCCTGTCCGCAGCAAAGGGGCACAGGCCG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTCCTGGGTCCTCCGCTaGTGGGAGAGCGCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSWVLR*WESAAV
Trigger: CACCGCGGCGCTCTCCCAGCAGCGGAGGACCCAGGA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTGGGTCCTCCGCTGCTaGGAGAGCGCCGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPWVLRC*ESAAVA
Trigger: AGCCACCGCGGCGCTCTCCCAGCAGCGGAGGACCCA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGCGGGCTTGAGTCTGTaGCGCGAACCCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPAGLSL*REPPAA
Trigger: GGCAGCTGGGGGTTCGCGTCACAGACTCAAGCCCGC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCACCTGCCAGATCCATaGCCGACGGCGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPHLPDP*PTARWA
Trigger: TGCCCACCGCGCCGTCGGGCATGGATCTGGCAGGTG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCTCGGCCTCGCACCTaGCAGATCCATGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPRPRT*QIHARR
Trigger: CCGTCGGGCATGGATCTGGCAGGTGCGAGGCCGAGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCTCCGCAGCGTACGCTaGGGGAAGGCGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPLRSVR*GKADSE
Trigger: CTCGCTGTCCGCCTTCCCGCAGCGTACGCTGCGGAG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAGCCTCGGCGCCCGGTaGCACTTTGCCACCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSLGAR*HFATSR
Trigger: GCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAGCTCGCGGCAGCATTaGGGCTGCACTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSSRQH*GCTGQP
Trigger: GGGCTGCCCAGTGCAGCCGCAATGCTGCCGCGAGCT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGAGCGCCGCGGTGGCTaGATGCTGACGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPERRGG*MLTCSG
Trigger: TCCGGAGCACGTCAGCATCCAGCCACCGCGGCGCTC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGGGTGGCCGCGGGGGTaGAGGGAAAAATCCGGACTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPGWPRG*REKSGL
Trigger: CAGTCCGGATTTTTCCCTCCACCCCCGCGGCCACCC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCTCGGCGTCCTTCGCTaGGCCCTGGCCTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGLGVLR*ALASAS
Trigger: CGAGGCCGAGGCCAGGGCTCAGCGAAGGACGCCGAG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTTCTGCTGGCGGGCTTaGGTCTGTGACGCGAACCCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPFCWRA*VCDANP
Trigger: GGGGTTCGCGTCACAGACTCAAGCCCGCCAGCAGAA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGCTGTAGGCACTCATTaGGCTGCTGCCGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPAVGTH*AAAAAV
Trigger: GACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAGAGCCTGGCAGCACTaGTTCCTCCTTGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPRAWQH*FLLGRT
Trigger: GGTGCGGCCAAGGAGGAAGCAGTGCTGCCAGGCTCT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCTCCAGAAGAGCCTTTaGTCGCGTCCGGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPLQKSL*SRPGQA
Trigger: GGCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGAG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCCGAGGAAGGAGAGTaGTGCGGAAAGCGTCTACGG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPEEGE*CGKRLR
Trigger: CCGTAGACGCTTTCCGCATCACTCTCCTTCCTCGGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCGGCCTGTGCCCCTTTaGTGCGGACAGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGRPVPL*CGQGSR
Trigger: GCGGCTGCCCTGTCCGCAGCAAAGGGGCACAGGCCG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGCGGTCCCCGGCCTGTaGCCCTTTGCTGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGAVPGL*PFAADR
Trigger: CCTGTCCGCAGCAAAGGGGCACAGGCCGGGGACCGC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCGCCCGGTGCCACTTTaGCACCTCTCGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGRPVPL*HLSRSP
Trigger: CGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCTTTCCCGGTTTTGTaGGGGCCTCTGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPFPVL*GPLEMG
Trigger: CCCCATCTCCAGAGGCCCCCACAAAACCGGGAAAGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTGGGTCCTCCGCTGCTaGGAGAGCGCCGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGWVLRC*ESAAVA
Trigger: AGCCACCGCGGCGCTCTCCCAGCAGCGGAGGACCCA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGGGCCGCAGGGTCTTTaGGGCTCCGCAGCGTACGCT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGGPQGL*GSAAYA
Trigger: AGCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCGCGAAGTCCGGCCTaGCCTTCTGCTGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPRSPA*PSAGGL
Trigger: AAGCCCGCCAGCAGAAGGGCAGGCCGGACTTCGCGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCTCGGCGCCCGGTaGCACTTTGCCACCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSLGAR*HFATSR
Trigger: GCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAGGCACTCATTGAGCTaGTGCCGCCGCTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPRHSLS*CRRCPF
Trigger: GAAAGGACAGCGGCGGCAGCAGCTCAATGAGTGCCT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCTCGCGGCAGCATTaGGGCTGCACTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSSRQH*GCTGQP
Trigger: GGGCTGCCCAGTGCAGCCGCAATGCTGCCGCGAGCT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTCCGATGCCCCACATTaGTGGCCGTGTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSDAPH*WPCASP
Trigger: TGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCCTTATGGTTCCGATaGCCCACATTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPLWFR*PTLLAV
Trigger: CACGGCCAGCAATGTGGGGCATCGGAACCATAAGGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTCCCCCAGCCCCGTTTaGCTGCATCAGGCTAACAAC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSPSPV*LHQANN
Trigger: GTTGTTAGCCTGATGCAGGCAAACGGGGCTGGGGGA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAGGCGGACAGCGAGCTaGCATAAAGGGAGTCGTTCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPRRTAS*HKGSRS
Trigger: GGAACGACTCCCTTTATGCCAGCTCGCTGTCCGCCT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGGGAGAGCGCCGCGGTaGCTGGATGCTGACGTGCTC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGGRAPR*LDADVL
Trigger: GAGCACGTCAGCATCCAGCCACCGCGGCGCTCTCCC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGATGCCCCACATTGCTaGCCGTGTGCTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPDAPHC*PCASPG
Trigger: TCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGCGGTGTCCCCCTTATaGTTCCGATGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPAVSPL*FRCPTL
Trigger: CAATGTGGGGCATCGGAACCATAAGGGGGACACCGC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAAAGTAGAGGCAACGTaGGGGAGCCCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPKVEAT*GSPPHV
Trigger: AACGTGGGGAGGGCTCCCCCACGTTGCCTCTACTTT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCGGAGGGTTAAAAGATaGTCGCCAAAGGCGAACGGG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPRRVKR*SPKANG
Trigger: CCCGTTCGCCTTTGGCGATCATCTTTTAACCCTCCG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCTAACCAGGCTGCATaGTGGCATCGGAGACTGACA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPNQAA*WHRRLT
Trigger: TGTCAGTCTCCGATGCCATCATGCAGCCTGGTTAGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371761.4
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGTCGGCCCGCCTCTGTaGTCCCCCGCCAGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATVGPPL*SPARLA
Trigger: TGCGAGCCTGGCGGGGGAGCACAGAGGCGGGCCGAC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGACGCGAACCCCCAGCTaGCCCAATTCCTACGGGGGC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGTRTPS*PNSYGG
Trigger: GCCCCCGTAGGAATTGGGGCAGCTGGGGGTTCGCGT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCACTCATTGAGCTGCTaGCGCCGCTGTCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPHSLSC*RRCPFL
Trigger: AAGGAAAGGACAGCGGCGGCAGCAGCTCAATGAGTG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCGAGAAGCCCGTCATaGCGGCCCCGCCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPRSPS*RPRQVP
Trigger: CGGGACCTGGCGGGGCCGGCATGACGGGCTTCTCGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTACATTGCTGGCCGTGTaGTTCACCAGGAACTCCACC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPTLLAV*FTRNST
Trigger: GGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCAGCCCCGTTTGCCTaGATCAGGCTAACAACCTCA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPAPFA*IRLTTS
Trigger: TGAGGTTGTTAGCCTGATGCAGGCAAACGGGGCTGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGGAGTAGCAGTTCGGTaGCCCTCAAGTTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPGVAVR*PSSYRS
Trigger: CGACCTGTAACTTGAGGGCCACCGAACTGCTACTCC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTGGCCGCATCATGAATaGCAGCGAAACCAGTTCGGT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPWPHHE*QRNQFG
Trigger: ACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGCTCTGGCCGCATCATaGATGACAGCGAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPALAAS*MTAKPV
Trigger: AACTGGTTTCGCTGTCATTCATGATGCGGCCAGAGC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCTCCCCACGTTTATTaGAGATTTGTGGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPPHVY*RFVAPP
Trigger: TGGGGGAGCCACAAATCTTCAATAAACGTGGGGAGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGAGGCTCGGCAGAGTTaGAGCGCCGCGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATEARQS*SAAGAG
Trigger: TCCCGCTCCCGCGGCGCTGCAACTCTGCCGAGCCTC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGAGCCTGGCAGCACTaGTTCCTCCTTGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGRAWQH*FLLGRT
Trigger: GGTGCGGCCAAGGAGGAAGCAGTGCTGCCAGGCTCT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCCGCCAGCCAGCTGTaGCCTGGAGCAGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATAASQL*PGAEPG
Trigger: GCCAGGCTCTGCTCCAGGGCACAGCTGGCTGGCGGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCGGTCCCCGGCCTGTaGCCCTTTGCTGCGGACAGG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATAVPGL*PFAADR
Trigger: CCTGTCCGCAGCAAAGGGGCACAGGCCGGGGACCGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCGCCCGGTGCCACTTTaGCACCTCTCGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATRPVPL*HLSRSP
Trigger: CGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTACAGGTCGTAACGATTaGCCAGTGCTCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPTGRND*PVLWAS
Trigger: AGAAGCCCAGAGCACTGGGCAATCGTTACGACCTGT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGGCTGGATGCTGACGTaGTCCGGAGGGTTAAAAGAT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPGWMLT*SGGLKD
Trigger: ATCTTTTAACCCTCCGGAGCACGTCAGCATCCAGCC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTCCTGGGTCCTCCGCTaGTGGGAGAGCGCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSWVLR*WESAAV
Trigger: CACCGCGGCGCTCTCCCAGCAGCGGAGGACCCAGGA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCGTGTGAGGCAGAACTaGAGGGGCAGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGRVRQN*RGRSSR
Trigger: CCTGGAGGACCTGCCCCTGCAGTTCTGCCTCACACG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGTCCGGGCCAAGCCGTaGGCTAATGCCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGVRAKP*ANAAQE
Trigger: TTCCTGAGCGGCATTAGCCCACGGCTTGGCCCGGAC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCCGAGGAAGGAGAGTaGTGCGGAAAGCGTCTACGG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPEEGE*CGKRLR
Trigger: CCGTAGACGCTTTCCGCATCACTCTCCTTCCTCGGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCTCGTTCAGGCTTTCTaGTGTAGGCACTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPLVQAF*CRHSLS
Trigger: GCTCAATGAGTGCCTACAGCAGAAAGCCTGAACGAG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTATTTAAGACGGTTGTaGAGGGCCGCAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPYLRRL*RAAGSL
Trigger: CAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCCTGGAGCAGAGCCTaGCAGCACTGCTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPWSRA*QHCFLL
Trigger: AAGGAGGAAGCAGTGCTGCCAGGCTCTGCTCCAGGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGGGAGAGCGCCGCGGTaGCTGGATGCTGACGTGCTC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATGRAPR*LDADVL
Trigger: GAGCACGTCAGCATCCAGCCACCGCGGCGCTCTCCC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTCCACCACCCGGAGGTaGCCTTCTTTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSTTRR*PSLAAK
Trigger: CTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTAAATTGAGCGCTTTTTaGGTTGAAAAACCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPKLSAF*VEKPAP
Trigger: GGGGGCGGGTTTTTCAACTCAAAAAGCGCTCAATTT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCTTGTTCACGGTGGTaGCTTGAGCCGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPCSRW*LEPCEA
Trigger: TGCCTCACACGGCTCAAGTCACCACCGTGAACAAGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCTTCAACTTGGGTGTTaGGATTGGCAAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPLQLGC*DWQKGK
Trigger: CTTCCCCTTTTGCCAATCTCAACACCCAAGTTGAAG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTCCCCCAGCCCCGTTTaGCTGCATCAGGCTAACAAC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSPSPV*LHQANN
Trigger: GTTGTTAGCCTGATGCAGGCAAACGGGGCTGGGGGA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGGAGGTGGCCTTCTTTaGCAGCCAAGTGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGGGGLL*QPSARA
Trigger: TGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTTTATTGAAGATTTGTaGCTCCCCCAGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPFIEDL*LPQPRL
Trigger: CAAACGGGGCTGGGGGAGCCACAAATCTTCAATAAA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAAAGTAGAGGCAACGTaGGGGAGCCCTCCCCACGTT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGKVEAT*GSPPHV
Trigger: AACGTGGGGAGGGCTCCCCCACGTTGCCTCTACTTT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCTGTAGGCACTCATTaGGCTGCTGCCGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATAVGTH*AAAAAV
Trigger: GACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCACTCATTGAGCTGCTaGCGCCGCTGTCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGHSLSC*RRCPFL
Trigger: AAGGAAAGGACAGCGGCGGCAGCAGCTCAATGAGTG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCGTGTGAGGCAGAACTaGAGGGGCAGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATRVRQN*RGRSSR
Trigger: CCTGGAGGACCTGCCCCTGCAGTTCTGCCTCACACG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCAAGTTTCATAACCTaGAGCGCAGTCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPSFIT*SAVLPN
Trigger: ATTTGGAAGGACTGCGCTGCAGGTTATGAAACTTGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCAGCCCCGTTTGCCTaGATCAGGCTAACAACCTCA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPAPFA*IRLTTS
Trigger: TGAGGTTGTTAGCCTGATGCAGGCAAACGGGGCTGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGTCCGGGCCAAGCCGTaGGCTAATGCCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATVRAKP*ANAAQE
Trigger: TTCCTGAGCGGCATTAGCCCACGGCTTGGCCCGGAC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCTCCAGAAGAGCCTTTaGTCGCGTCCGGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATLQKSL*SRPGQA
Trigger: GGCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGAG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGGAGTAGCAGTTCGGTaGCCCTCAAGTTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGGVAVR*PSSYRS
Trigger: CGACCTGTAACTTGAGGGCCACCGAACTGCTACTCC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTCCTCCCATAGAGCCTaGCCAAATCACAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSSHRA*PNHRRC
Trigger: ACACCGCCTGTGATTTGGCCAGGCTCTATGGGAGGA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTGGCCGCATCATGAATaGCAGCGAAACCAGTTCGGT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGWPHHE*QRNQFG
Trigger: ACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCTCCCCACGTTTATTaGAGATTTGTGGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPPHVY*RFVAPP
Trigger: TGGGGGAGCCACAAATCTTCAATAAACGTGGGGAGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTCAAGGACTGGAAACTaGGAAATAGTCCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSRTGN*EIVLSQ
Trigger: CTGAGAAAGGACTATTTCGCAGTTTCCAGTCCTTGA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGCCTCTCAGAGAGGGTaGCGGTTTCTTCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGASQRG*RFLLPF
Trigger: AAAAGGGAGAAGAAACCGGCACCCTCTCTGAGAGGC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGACAGGTCGTAACGATTaGCCAGTGCTCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGTGRND*PVLWAS
Trigger: AGAAGCCCAGAGCACTGGGCAATCGTTACGACCTGT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTCTTTGGCAGCCAAGTaGAAGGGCAGGTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSLAAK*KGRFPS
Trigger: TGAAGGGAACCTGCCCTTGCACTTGGCTGCCAAAGA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCTTTCCCGGTTTTGTaGGGGCCTCTGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPFPVL*GPLEMG
Trigger: CCCCATCTCCAGAGGCCCCCACAAAACCGGGAAAGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTCCACCACCCGGAGGTaGCCTTCTTTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSTTRR*PSLAAK
Trigger: CTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCTTGTTCACGGTGGTaGCTTGAGCCGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPCSRW*LEPCEA
Trigger: TGCCTCACACGGCTCAAGTCACCACCGTGAACAAGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR TCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTATGTTAACATCAGCTTaGAACTCCAGCAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPMLTSA*NSSKVC
Trigger: ACAGACTTTGCTGGAGTTTCAAGCTGATGTTAACAT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCTCGTTCAGGCTTTCTaGTGTAGGCACTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGLVQAF*CRHSLS
Trigger: GCTCAATGAGTGCCTACAGCAGAAAGCCTGAACGAG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGTGTCCAGGAAACCTaGTCTGGCCGCATCATGAAT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGSVQET*SGRIMN
Trigger: ATTCATGATGCGGCCAGAGCAGGTTTCCTGGACACT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTCCGATGCCCCACATTaGTGGCCGTGTGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSDAPH*WPCASP
Trigger: TGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCCTTATGGTTCCGATaGCCCACATTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPLWFR*PTLLAV
Trigger: CACGGCCAGCAATGTGGGGCATCGGAACCATAAGGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTCCCCCAGCCCCGTTTaGCTGCATCAGGCTAACAAC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSPSPV*LHQANN
Trigger: GTTGTTAGCCTGATGCAGGCAAACGGGGCTGGGGGA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGGAGGTGGCCTTCTTTaGCAGCCAAGTGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATGGGLL*QPSARA
Trigger: TGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGATGCCCCACATTGCTaGCCGTGTGCTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATDAPHC*PCASPG
Trigger: TCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCGGTGTCCCCCTTATaGTTCCGATGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATAVSPL*FRCPTL
Trigger: CAATGTGGGGCATCGGAACCATAAGGGGGACACCGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCTTCAACTTGGGTGTTaGGATTGGCAAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGLQLGC*DWQKGK
Trigger: CTTCCCCTTTTGCCAATCTCAACACCCAAGTTGAAG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGACATTGCTGGCCGTGTaGTTCACCAGGAACTCCACC +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATTLLAV*FTRNST
Trigger: GGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCTCCCATGTCTACCATaGCAGTCTGGTTACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGLPCLP*QSGYFC
Trigger: ACAGAAGTAACCAGACTGCCATGGTAGACATGGGAG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTCCTCCCATAGAGCCTaGCCAAATCACAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSSHRA*PNHRRC
Trigger: ACACCGCCTGTGATTTGGCCAGGCTCTATGGGAGGA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTACAAAGTCTTCAACTTaGGTGTTGAGATTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VRRATQLIDKVEATWGSPTKSST*VLRLAK
Trigger: TTTTGCCAATCTCAACACCCAAGTTGAAGACTTTGT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGCCGCATCATGAATaGCAGCGAAACCAGTTCGGT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATWPHHE*QRNQFG
Trigger: ACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCTCTGGCCGCATCATaGATGACAGCGAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATALAAS*MTAKPV
Trigger: AACTGGTTTCGCTGTCATTCATGATGCGGCCAGAGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCCTCTCAGAGAGGGTaGCGGTTTCTTCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATASQRG*RFLLPF
Trigger: AAAAGGGAGAAGAAACCGGCACCCTCTCTGAGAGGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR GCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCAAGTTTCATAACCTaGAGCGCAGTCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPSFIT*SAVLPN
Trigger: ATTTGGAAGGACTGCGCTGCAGGTTATGAAACTTGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGAGTGTCCAGGAAACCTaGTCTGGCCGCATCATGAAT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSVQET*SGRIMN
Trigger: ATTCATGATGCGGCCAGAGCAGGTTTCCTGGACACT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCTTCAACTTGGGTGTTaGGATTGGCAAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATLQLGC*DWQKGK
Trigger: CTTCCCCTTTTGCCAATCTCAACACCCAAGTTGAAG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTTTATTGAAGATTTGTaGCTCCCCCAGCCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATFIEDL*LPQPRL
Trigger: CAAACGGGGCTGGGGGAGCCACAAATCTTCAATAAA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR GCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCAAGTTTCATAACCTaGAGCGCAGTCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPSFIT*SAVLPN
Trigger: ATTTGGAAGGACTGCGCTGCAGGTTATGAAACTTGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGACAAAGTCTTCAACTTaGGTGTTGAGATTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LKVRRATQLIDKVEATWGTKSST*VLRLAK
Trigger: TTTTGCCAATCTCAACACCCAAGTTGAAGACTTTGT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR TCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGATGTTAACATCAGCTTaGAACTCCAGCAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATMLTSA*NSSKVC
Trigger: ACAGACTTTGCTGGAGTTTCAAGCTGATGTTAACAT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CCA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGACAAAGTCTTCAACTTaGGTGTTGAGATTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: MTLKVRRATQLIDKVEATTKSST*VLRLAK
Trigger: TTTTGCCAATCTCAACACCCAAGTTGAAGACTTTGT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 90 bp GGGAGTCGTTCCTCAGCGCTAGCGGGGCAGGTCGGCCCGCCTCTGTaGTCCCCCGCCAGGCTCGCAAAGTTCGGGCGGCCAGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GSRSSALAGQVGPPL*SPARLAKFGRPGCG
Trigger: GCCGCAGCCTGGCCGCCCGAACTTTGCGAGCCTGGCGGGGGAGCACAGAGGCGGGCCGACCTGCCCCGCTAGCGCTGAGGAACGACTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 90 bp CGCTCTCCACCTCCTCCCGTCAAGTCTCTCGCGCCGGCTCCCTCCTaGCGGCTAGGCGGCCTGTCCCCAGCTGGAGCGGGGTTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RSPPPPVKSLAPAPS*RLGGLSPAGAGFGP
Trigger: GGGGCCGAACCCCGCTCCAGCTGGGGACAGGCCGCCTAGCCGGCAGGAGGGAGCCGGCGCGAGAGACTTGACGGGAGGAGGTGGAGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 90 bp GTCCGGTCGCCGTCTCGGCGAGCGCTCAGCAGCCTCGGCGCCCGGTaGCACTTTGCCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: VRSPSRRALSSLGAR*HFATSRGPRPVPLC
Trigger: GCAAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGCCGAGACGGCGACCGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp GTAAACTCGGCGTCCTTCGCTGAGCCCTGGCCTCGGCCTCGCACCTaGCAGATCCATGCCCGACGGCGCGGTGGGCAGGGGTGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: VNSASFAEPWPRPRT*QIHARRRGGQGWPR
Trigger: CCGCGGCCACCCCTGCCCACCGCGCCGTCGGGCATGGATCTGGCAGGTGCGAGGCCGAGGCCAGGGCTCAGCGAAGGACGCCGAGTTTAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 90 bp GCCGTCTCGGCGAGCGCTCAGCAGCCTCGGCGCCCGGTGCCACTTTaGCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTTGCTGCGGACA +
Preference number: 5 (lower is better)
Translates to: AVSASAQQPRRPVPL*HLSRSPACAPLLRT
Trigger: TGTCCGCAGCAAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGCCGAGACGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS TCA 90 bp GGCCCCGCCAGGTCCCGGGACTCCCGGCAGCCCGAGGAAGGAGAGTaGTGCGGAAAGCGTCTACGGAGCCCGGACTGCTGGGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GPARSRDSRQPEEGE*CGKRLRSPDCWGSS
Trigger: CGAGCTGCCCCAGCAGTCCGGGCTCCGTAGACGCTTTCCGCATCACTCTCCTTCCTCGGGCTGCCGGGAGTCCCGGGACCTGGCGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CCA 90 bp TCTAGGCGCGCGCGCTCTGTAAACTCGGCGTCCTTCGCTGAGCCCTaGCCTCGGCCTCGCACCTGCCAGATCCATGCCCGACGGCGCGGT +
Preference number: 5 (lower is better)
Translates to: SRRARSVNSASFAEP*PRPRTCQIHARRRG
Trigger: ACCGCGCCGTCGGGCATGGATCTGGCAGGTGCGAGGCCGAGGCCAGGGCTCAGCGAAGGACGCCGAGTTTACAGAGCGCGCGCGCCTAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CCA 90 bp CTGGGCTTCTCCAGAAGAGCCTTTGGTCGCGTCCGGGCCAAGCCGTaGGCTAATGCCGCTCAGGAAAGCTCCGGAGCCCGCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGFSRRAFGRVRAKP*ANAAQESSGARPPG
Trigger: GCCTGGCGGGCGGGCTCCGGAGCTTTCCTGAGCGGCATTAGCCCACGGCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGAGAAGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp GGGTCCCTTGTTCACGGTGGTGACTTGAGCCGTGTGAGGCAGAACTaGAGGGGCAGGTCCTCCAGGGGGCTCGGTTTCCATCCGTCTCGC +
Preference number: 5 (lower is better)
Translates to: GSLVHGGDLSRVRQN*RGRSSRGLGFHPSR
Trigger: GCGAGACGGATGGAAACCGAGCCCCCTGGAGGACCTGCCCCTGCAGTTCTGCCTCACACGGCTCAAGTCACCACCGTGAACAAGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CCA 90 bp GGGATAGTCCTGGGTCCTCCGCTGCTGGGAGAGCGCCGCGGTGGCTaGATGCTGACGTGCTCCGGAGGGTTAAAAGATGATCGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: GIVLGPPLLGERRGG*MLTCSGGLKDDRQR
Trigger: CCTTTGGCGATCATCTTTTAACCCTCCGGAGCACGTCAGCATCCAGCCACCGCGGCGCTCTCCCAGCAGCGGAGGACCCAGGACTATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS TCA 90 bp GCGCCGCGGTGGCTGGATGCTGACGTGCTCCGGAGGGTTAAAAGATaGTCGCCAAAGGCGAACGGGAGTAGCAGTTCGGTGGCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: APRWLDADVLRRVKR*SPKANGSSSSVALK
Trigger: CTTGAGGGCCACCGAACTGCTACTCCCGTTCGCCTTTGGCGATCATCTTTTAACCCTCCGGAGCACGTCAGCATCCAGCCACCGCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp GCGGTGTCCCCCTTATGGTTCCGATGCCCCACATTGCTGGCCGTGTaGTTCACCAGGAACTCCACCACCCGGAGGTGGCCTTCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: AVSPLWFRCPTLLAV*FTRNSTTRRWPSLA
Trigger: TGCCAAAGAAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 90 bp CCAAATCACAGGCGGTGTCCCCCTTATGGTTCCGATGCCCCACATTaGTGGCCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PNHRRCPPYGSDAPH*WPCASPGTPPPGGG
Trigger: GCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCTGTGATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 90 bp ATTCCTACGGGGGCGAGGACAGGGGTTTGTTATTTAAGACGGTTGTaGAGGGCCGCAGGGTCTTTGAGGCTCCGCAGCGTACGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: IPTGARTGVCYLRRL*RAAGSLRLRSVRCG
Trigger: CCCGCAGCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACAAACCCCTGTCCTCGCCCCCGTAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CCA 90 bp AATCACAGGCGGTGTCCCCCTTATGGTTCCGATGCCCCACATTGCTaGCCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: NHRRCPPYGSDAPHC*PCASPGTPPPGGGL
Trigger: AAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCTGTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 90 bp TTCGGTGGCCCTCAAGTTACAGGTCGTAACGATTGCCCAGTGCTCTaGGCTTCTCCAGAAGAGCCTTTGGTCGCGTCCGGGCCAAGCCGT +
Preference number: 5 (lower is better)
Translates to: FGGPQVTGRNDCPVL*ASPEEPLVASGPSR
Trigger: ACGGCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGAGAAGCCCAGAGCACTGGGCAATCGTTACGACCTGTAACTTGAGGGCCACCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCGGCCTGTGCCCCTTaGCTGCGGACAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPACAP*LRTGQP
Trigger: CGGCTGCCCTGTCCGCAGCAAAGGGGCACAGGCCGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp ACCGAGCTCGTTCAGGCTTTCTGCTGTAGGCACTCATTGAGCTGCTaGCGCCGCTGTCCTTTCCTTCCTTTCCCGGTTTTGTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: TELVQAFCCRHSLSC*RRCPFLPFPVLWGP
Trigger: AGGCCCCCACAAAACCGGGAAAGGAAGGAAAGGACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGCAGAAAGCCTGAACGAGCTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp ACGACCGAGCTCGTTCAGGCTTTCTGCTGTAGGCACTCATTGAGCTaGTGCCGCCGCTGTCCTTTCCTTCCTTTCCCGGTTTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TTELVQAFCCRHSLS*CRRCPFLPFPVLWG
Trigger: CCCCCACAAAACCGGGAAAGGAAGGAAAGGACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGCAGAAAGCCTGAACGAGCTCGGTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 90 bp AGCAGTTCGGTGGCCCTCAAGTTACAGGTCGTAACGATTGCCCAGTaGTCTGGGCTTCTCCAGAAGAGCCTTTGGTCGCGTCCGGGCCAA +
Preference number: 5 (lower is better)
Translates to: SSSVALKLQVVTIAQ*SGLLQKSLWSRPGQ
Trigger: TTGGCCCGGACGCGACCAAAGGCTCTTCTGGAGAAGCCCAGAGCACTGGGCAATCGTTACGACCTGTAACTTGAGGGCCACCGAACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CCA 90 bp CCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTGGCCTTCTTTaGCAGCCAAGTGCAAGGGCAGGTTCCCTTCATTATCCTCGATGT +
Preference number: 5 (lower is better)
Translates to: PCASPGTPPPGGGLL*QPSARAGSLHYPRC
Trigger: ACATCGAGGATAATGAAGGGAACCTGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 90 bp ACATTGCTGGCCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTaGCCTTCTTTGGCAGCCAAGTGCAAGGGCAGGTTCCCTTCATTA +
Preference number: 5 (lower is better)
Translates to: TLLAVCFTRNSTTRR*PSLAAKCKGRFPSL
Trigger: TAATGAAGGGAACCTGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTTCTCCAGAAGAGCCTTaGGTCGCGTCCGGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPSPEEP*VASGPS
Trigger: GCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGAGA...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGGGCCGCAGGGTCTTaGAGGCTCCGCAGCGTACGC +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGRAAGS*RLRSVR
Trigger: GCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCCT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGGAGGCTCGGCAGAGTaGCAGCGCCGCGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATGGSAE*QRRGSG
Trigger: CCCGCTCCCGCGGCGCTGCAACTCTGCCGAGCCTCC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCTTCCTTTCCCGGTTTaGTGGGGGCCTCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPLPFPV*WGPLEM
Trigger: CATCTCCAGAGGCCCCCACAAAACCGGGAAAGGAAG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTGTTCACGGTGGTGACTaGAGCCGTGTGAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPVHGGD*SRVRQN
Trigger: GTTCTGCCTCACACGGCTCAAGTCACCACCGTGAAC...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCGGCCTGTGCCCCTTaGCTGCGGACAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPACAP*LRTGQP
Trigger: CGGCTGCCCTGTCCGCAGCAAAGGGGCACAGGCCGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGGCGCCCGGTGCCACTTaGCCACCTCTCGCGGTCCCC +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATAPGAT*PPLAVP
Trigger: GGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGC...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTCCCTCCCCACGTTTATaGAAGATTTGTGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPPSPRL*KICGSP
Trigger: GGGGGAGCCACAAATCTTCAATAAACGTGGGGAGGG...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCAGCTCGCGGCAGCATaGCGGCTGCACTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATQLAAA*RLHWAA
Trigger: GGCTGCCCAGTGCAGCCGCAATGCTGCCGCGAGCTG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTACGTTTATTGAAGATTaGTGGCTCCCCCAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPTFIED*WLPQPR
Trigger: ACGGGGCTGGGGGAGCCACAAATCTTCAATAAACGT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTTCCGATGCCCCACATaGCTGGCCGTGTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGFRCPT*LAVCFT
Trigger: GGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp GTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAGCCCTACTTGGGTGTTGAGATaGGCAAAAGGGGAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VRRATQLIDKVEATWGSPTWVLR*AKGEAR
Trigger: CCTTGCTTCCCCTTTTGCCAATCTCAACACCCAAGT...AGGGCTCCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGAGCACTGCTTCCTCCTaGGCCGCACCGCTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATSTASS*AAPLPV
Trigger: CACTGGGAGCGGTGCGGCCAAGGAGGAAGCAGTGCT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCTTCCTTTCCCGGTTTaGTGGGGGCCTCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGLPFPV*WGPLEM
Trigger: CATCTCCAGAGGCCCCCACAAAACCGGGAAAGGAAG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS TCA 90 bp AGCAAAGTCTGTAAAGTGTCCAGGAAACCTGCTCTGGCCGCATCATaGATGACAGCGAAACCAGTTCGGTCTTTCAAATCGGGATTAGCA +
Preference number: 5 (lower is better)
Translates to: SKVCKVSRKPALAAS*MTAKPVRSFKSGLA
Trigger: TGCTAATCCCGATTTGAAAGACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCAGAGCAGGTTTCCTGGACACTTTACAGACTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCAATTGCTGCTTCTGTaGCCTCTCAGAGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGQLLLL*PLREGA
Trigger: GGCACCCTCTCTGAGAGGCAACAGAAGCAGCAATTG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCCTCCCCACGTTTATaGAAGATTTGTGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPSPRL*KICGSP
Trigger: GGGGGAGCCACAAATCTTCAATAAACGTGGGGAGGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS TCA 90 bp TGCAAGGGCAGGTTCCCTTCATTATCCTCGATGTTAACATCAGCTTaGAACTCCAGCAAAGTCTGTAAAGTGTCCAGGAAACCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: CKGRFPSLSSMLTSA*NSSKVCKVSRKPAL
Trigger: CAGAGCAGGTTTCCTGGACACTTTACAGACTTTGCTGGAGTTTCAAGCTGATGTTAACATCGAGGATAATGAAGGGAACCTGCCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTGTTATTTAAGACGGTaGTGGAGGGCCGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGCYLRR*WRAAGS
Trigger: AGACCCTGCGGCCCTCCACAACCGTCTTAAATAACA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTTCCGATGCCCCACATaGCTGGCCGTGTGCTTCACC +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATFRCPT*LAVCFT
Trigger: GGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGGGCGAGGACAGGGGTTaGTTATTTAAGACGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGGEDRG*LFKTVV
Trigger: CACAACCGTCTTAAATAACAAACCCCTGTCCTCGCC...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGACTTGGGTGTTGAGATaGGCAAAAGGGGAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGTWVLR*AKGEAR
Trigger: CCTTGCTTCCCCTTTTGCCAATCTCAACACCCAAGT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGTTTTCGCTGAAACAATaGCTGCTTCTGTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGFSLKQ*LLLLPL
Trigger: GAGAGGCAACAGAAGCAGCAATTGTTTCAGCGAAAA...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGACGTTTATTGAAGATTaGTGGCTCCCCCAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATTFIED*WLPQPR
Trigger: ACGGGGCTGGGGGAGCCACAAATCTTCAATAAACGT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGACTTGGGTGTTGAGATaGGCAAAAGGGGAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATTWVLR*AKGEAR
Trigger: CCTTGCTTCCCCTTTTGCCAATCTCAACACCCAAGT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGAACAAAGTCTTCAACTaGGGTGTTGAGATTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGNKVFN*GVEIGK
Trigger: TTTGCCAATCTCAACACCCAAGTTGAAGACTTTGTT...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTTTTCGCTGAAACAATaGCTGCTTCTGTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATFSLKQ*LLLLPL
Trigger: GAGAGGCAACAGAAGCAGCAATTGTTTCAGCGAAAA...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS-3UTR CAA 90 bp TTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGTGGGGGCCTTCCAAATCCATTTaGTGCATTGACGTTTACATT +
Preference number: 5 (lower is better)
Translates to: LKVRRATQLIDKVEATWGPSKSI*CIDVYI
Trigger: AATGTAAACGTCAATGCACAAAATGGATTTGGAAGG...CCCCCACGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 90 bp TCCAAGTTTCATAACCTGCAGCGCAGTCCTTCCAAATCCATTTTGTaGATTGACGTTTACATTATTTTGCAACAAACTAGTAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SKFHNLQRSPSKSIL*IDVYIILQQTSKLL
Trigger: GAGCAACTTACTAGTTTGTTGCAAAATAATGTAAACGTCAATGCACAAAATGGATTTGGAAGGACTGCGCTGCAGGTTATGAAACTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGAACAAAGTCTTCAACTaGGGTGTTGAGATTGGCAAA +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATNKVFN*GVEIGK
Trigger: TTTGCCAATCTCAACACCCAAGTTGAAGACTTTGTT...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS-3UTR CAA 90 bp ATGACATTAAAAGTCAGGAGAGCTACTCAGTTAATTGATAAAGTAGAGGCAACGCCTTCCAAATCCATTTaGTGCATTGACGTTTACATT +
Preference number: 5 (lower is better)
Translates to: MTLKVRRATQLIDKVEATPSKSI*CIDVYI
Trigger: AATGTAAACGTCAATGCACAAAATGGATTTGGAAGG...CGTTGCCTCTACTTTATCAATTAACTGAGTAGCTCTCCTGACTTTTAATGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 72 bp GCGTCCTTCGCTGAGCCCTGGCCTCGGCCTCGCACCTaGCAGATCCATGCCCGACGGCGCGGTGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: ASFAEPWPRPRT*QIHARRRGGQG
Trigger: CCCCTGCCCACCGCGCCGTCGGGCATGGATCTGGCAGGTGCGAGGCCGAGGCCAGGGCTCAGCGAAGGACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 72 bp CCTCCTCCCGTCAAGTCTCTCGCGCCGGCTCCCTCCTaGCGGCTAGGCGGCCTGTCCCCAGCTGGAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PPPVKSLAPAPS*RLGGLSPAGAG
Trigger: CCCCGCTCCAGCTGGGGACAGGCCGCCTAGCCGGCAGGAGGGAGCCGGCGCGAGAGACTTGACGGGAGGAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 72 bp CCGTCTCGGCGAGCGCTCAGCAGCCTCGGCGCCCGGTaGCACTTTGCCACCTCTCGCGGTCCCCGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PSRRALSSLGAR*HFATSRGPRPV
Trigger: CACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGCCGAGACGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CAA 90 bp CGCCGTCTCGGCGAGCGCTCAGCAGCCTCGGCGCCCGGTGCCACTTaGCCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTTGCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: RRLGERSAASAPGAT*PPLAVPGLCPFAAD
Trigger: GTCCGCAGCAAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGCCGAGACGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 72 bp TCCTCAGCGCTAGCGGGGCAGGTCGGCCCGCCTCTGTaGTCCCCCGCCAGGCTCGCAAAGTTCGGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSALAGQVGPPL*SPARLAKFGRP
Trigger: TGGCCGCCCGAACTTTGCGAGCCTGGCGGGGGAGCACAGAGGCGGGCCGACCTGCCCCGCTAGCGCTGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 72 bp GCGAGCGCTCAGCAGCCTCGGCGCCCGGTGCCACTTTaGCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTTG +
Preference number: 6 (lower is better)
Translates to: ASAQQPRRPVPL*HLSRSPACAPL
Trigger: CAAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CAA 72 bp GGCGAGCGCTCAGCAGCCTCGGCGCCCGGTGCCACTTaGCCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTT +
Preference number: 6 (lower is better)
Translates to: GERSAASAPGAT*PPLAVPGLCPF
Trigger: AAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAAGTGGCACCGGGCGCCGAGGCTGCTGAGCGCTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 72 bp TTTGCCACCTCTCGCGGTCCCCGGCCTGTGCCCCTTTaGTGCGGACAGGGCAGCCGCCAGCCAGCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: FATSRGPRPVPL*CGQGSRQPAVP
Trigger: GGGCACAGCTGGCTGGCGGCTGCCCTGTCCGCAGCAAAGGGGCACAGGCCGGGGACCGCGAGAGGTGGCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 72 bp CAGCTGGAGCGGGGTTCGGCCCCGCGAAGTCCGGCCTaGCCTTCTGCTGGCGGGCTTGAGTCTGTGACGCGA +
Preference number: 6 (lower is better)
Translates to: QLERGSAPRSPA*PSAGGLESVTR
Trigger: TCGCGTCACAGACTCAAGCCCGCCAGCAGAAGGGCAGGCCGGACTTCGCGGGGCCGAACCCCGCTCCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS TCA 72 bp GTCCGGCCTGCCCTTCTGCTGGCGGGCTTGAGTCTGTaGCGCGAACCCCCAGCTGCCCCAATTCCTACGGGG +
Preference number: 6 (lower is better)
Translates to: VRPALLLAGLSL*REPPAAPIPTG
Trigger: CCCCGTAGGAATTGGGGCAGCTGGGGGTTCGCGTCACAGACTCAAGCCCGCCAGCAGAAGGGCAGGCCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS TCA 72 bp CCCGCGAAGTCCGGCCTGCCCTTCTGCTGGCGGGCTTaGGTCTGTGACGCGAACCCCCAGCTGCCCCAATTC +
Preference number: 6 (lower is better)
Translates to: PAKSGLPFCWRA*VCDANPQLPQF
Trigger: GAATTGGGGCAGCTGGGGGTTCGCGTCACAGACTCAAGCCCGCCAGCAGAAGGGCAGGCCGGACTTCGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CCA 72 bp GCGCGCTCTGTAAACTCGGCGTCCTTCGCTGAGCCCTaGCCTCGGCCTCGCACCTGCCAGATCCATGCCCGA +
Preference number: 6 (lower is better)
Translates to: ARSVNSASFAEP*PRPRTCQIHAR
Trigger: TCGGGCATGGATCTGGCAGGTGCGAGGCCGAGGCCAGGGCTCAGCGAAGGACGCCGAGTTTACAGAGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CCA 72 bp TCCGCAGCGTACGCTGCGGGAAGGCGGACAGCGAGCTaGCATAAAGGGAGTCGTTCCTCAGCGCTAGCGGGG +
Preference number: 6 (lower is better)
Translates to: SAAYAAGRRTAS*HKGSRSSALAG
Trigger: CCCCGCTAGCGCTGAGGAACGACTCCCTTTATGCCAGCTCGCTGTCCGCCTTCCCGCAGCGTACGCTGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CCA 72 bp TCCAGAAGAGCCTTTGGTCGCGTCCGGGCCAAGCCGTaGGCTAATGCCGCTCAGGAAAGCTCCGGAGCCCGC +
Preference number: 6 (lower is better)
Translates to: SRRAFGRVRAKP*ANAAQESSGAR
Trigger: GCGGGCTCCGGAGCTTTCCTGAGCGGCATTAGCCCACGGCTTGGCCCGGACGCGACCAAAGGCTCTTCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CCA 72 bp CTGGGTCCTCCGCTGCTGGGAGAGCGCCGCGGTGGCTaGATGCTGACGTGCTCCGGAGGGTTAAAAGATGAT +
Preference number: 6 (lower is better)
Translates to: LGPPLLGERRGG*MLTCSGGLKDD
Trigger: ATCATCTTTTAACCCTCCGGAGCACGTCAGCATCCAGCCACCGCGGCGCTCTCCCAGCAGCGGAGGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CAA 90 bp GCCAAATCACAGGCGGTGTCCCCCTTATGGTTCCGATGCCCCACATaGCTGGCCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: AKSQAVSPLWFRCPT*LAVCFTRNSTTRRW
Trigger: CCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCTGTGATTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 72 bp CCCTTATGGTTCCGATGCCCCACATTGCTGGCCGTGTaGTTCACCAGGAACTCCACCACCCGGAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: PLWFRCPTLLAV*FTRNSTTRRWP
Trigger: AGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 72 bp AGGCGGTGTCCCCCTTATGGTTCCGATGCCCCACATTaGTGGCCGTGTGCTTCACCAGGAACTCCACCACCC +
Preference number: 6 (lower is better)
Translates to: RRCPPYGSDAPH*WPCASPGTPPP
Trigger: GGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 72 bp GCCGTGTGCTTCACCAGGAACTCCACCACCCGGAGGTaGCCTTCTTTGGCAGCCAAGTGCAAGGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: AVCFTRNSTTRR*PSLAAKCKGRF
Trigger: GAACCTGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 72 bp CGGTGTCCCCCTTATGGTTCCGATGCCCCACATTGCTaGCCGTGTGCTTCACCAGGAACTCCACCACCCGGA +
Preference number: 6 (lower is better)
Translates to: RCPPYGSDAPHC*PCASPGTPPPG
Trigger: TCCGGGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CAA 72 bp TGCTGCCGCCGCTGTCCTTTCCTTCCTTTCCCGGTTTaGTGGGGGCCTCTGGAGATGGGGAGAGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CCRRCPFLPFPV*WGPLEMGRVLG
Trigger: TCCCAGGACTCTCCCCATCTCCAGAGGCCCCCACAAAACCGGGAAAGGAAGGAAAGGACAGCGGCGGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CAA 72 bp CAGGCGGTGTCCCCCTTATGGTTCCGATGCCCCACATaGCTGGCCGTGTGCTTCACCAGGAACTCCACCACC +
Preference number: 6 (lower is better)
Translates to: QAVSPLWFRCPT*LAVCFTRNSTT
Trigger: GGTGGTGGAGTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CAA 90 bp ACAGGGGTTTGTTATTTAAGACGGTTGTGGAGGGCCGCAGGGTCTTaGAGGCTCCGCAGCGTACGCTGCGGGAAGGCGGACAGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: TGVCYLRRLWRAAGS*RLRSVRCGKADSEL
Trigger: CAGCTCGCTGTCCGCCTTCCCGCAGCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACAAACCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CAA 72 bp TGTTATTTAAGACGGTTGTGGAGGGCCGCAGGGTCTTaGAGGCTCCGCAGCGTACGCTGCGGGAAGGCGGAC +
Preference number: 6 (lower is better)
Translates to: CYLRRLWRAAGS*RLRSVRCGKAD
Trigger: GTCCGCCTTCCCGCAGCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CAA 72 bp ACGGGGGCGAGGACAGGGGTTTGTTATTTAAGACGGTaGTGGAGGGCCGCAGGGTCTTTGAGGCTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: TGARTGVCYLRR*WRAAGSLRLRS
Trigger: GCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACAAACCCCTGTCCTCGCCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS CAA 90 bp CCAATTCCTACGGGGGCGAGGACAGGGGTTTGTTATTTAAGACGGTaGTGGAGGGCCGCAGGGTCTTTGAGGCTCCGCAGCGTACGCTGC +
Preference number: 6 (lower is better)
Translates to: PIPTGARTGVCYLRR*WRAAGSLRLRSVRC
Trigger: GCAGCGTACGCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACAAACCCCTGTCCTCGCCCCCGTAGGAATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS GCA 72 bp AACTTCCCGCCTACGACCGAGCTCGTTCAGGCTTTCTaGTGTAGGCACTCATTGAGCTGCTGCCGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: NFPPTTELVQAF*CRHSLSCCRRC
Trigger: ACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGCAGAAAGCCTGAACGAGCTCGGTCGTAGGCGGGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 72 bp GCCAAATCACAGGCGGTGTCCCCCTTATGGTTCCGATaGCCCACATTGCTGGCCGTGTGCTTCACCAGGAAC +
Preference number: 6 (lower is better)
Translates to: AKSQAVSPLWFR*PTLLAVCFTRN
Trigger: GTTCCTGGTGAAGCACACGGCCAGCAATGTGGGGCATCGGAACCATAAGGGGGACACCGCCTGTGATTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CCA 72 bp GGGGCGAGGACAGGGGTTTGTTATTTAAGACGGTTGTaGAGGGCCGCAGGGTCTTTGAGGCTCCGCAGCGTA +
Preference number: 6 (lower is better)
Translates to: GARTGVCYLRRL*RAAGSLRLRSV
Trigger: TACGCTGCGGAGCCTCAAAGACCCTGCGGCCCTCCACAACCGTCTTAAATAACAAACCCCTGTCCTCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262662.5
CDS TCA 72 bp TGGCTGGATGCTGACGTGCTCCGGAGGGTTAAAAGATaGTCGCCAAAGGCGAACGGGAGTAGCAGTTCGGTG +
Preference number: 6 (lower is better)
Translates to: WLDADVLRRVKR*SPKANGSSSSV
Trigger: CACCGAACTGCTACTCCCGTTCGCCTTTGGCGATCATCTTTTAACCCTCCGGAGCACGTCAGCATCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS CCA 72 bp TCACCAGGAACTCCACCACCCGGAGGTGGCCTTCTTTaGCAGCCAAGTGCAAGGGCAGGTTCCCTTCATTAT +
Preference number: 6 (lower is better)
Translates to: SPGTPPPGGGLL*QPSARAGSLHY
Trigger: ATAATGAAGGGAACCTGCCCTTGCACTTGGCTGCCAAAGAAGGCCACCTCCGGGTGGTGGAGTTCCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS GCA 72 bp GTTCAGGCTTTCTGCTGTAGGCACTCATTGAGCTGCTaGCGCCGCTGTCCTTTCCTTCCTTTCCCGGTTTTG +
Preference number: 6 (lower is better)
Translates to: VQAFCCRHSLSC*RRCPFLPFPVL
Trigger: CAAAACCGGGAAAGGAAGGAAAGGACAGCGGCGGCAGCAGCTCAATGAGTGCCTACAGCAGAAAGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262662.5
ENST00000396148.2
CDS GCA 72 bp CGTTTATTGAAGATTTGTGGCTCCCCCAGCCCCGTTTaGCTGCATCAGGCTAACAACCTCATTCCTCCCATA +
Preference number: 6 (lower is better)
Translates to: RLLKICGSPSPV*LHQANNLIPPI
Trigger: TATGGGAGGAATGAGGTTGTTAGCCTGATGCAGGCAAACGGGGCTGGGGGAGCCACAAATCTTCAATAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS TCA 72 bp AAGTGTCCAGGAAACCTGCTCTGGCCGCATCATGAATaGCAGCGAAACCAGTTCGGTCTTTCAAATCGGGAT +
Preference number: 6 (lower is better)
Translates to: KCPGNLLWPHHE*QRNQFGLSNRD
Trigger: ATCCCGATTTGAAAGACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCAGAGCAGGTTTCCTGGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS TCA 72 bp TGTAAAGTGTCCAGGAAACCTGCTCTGGCCGCATCATaGATGACAGCGAAACCAGTTCGGTCTTTCAAATCG +
Preference number: 6 (lower is better)
Translates to: CKVSRKPALAAS*MTAKPVRSFKS
Trigger: CGATTTGAAAGACCGAACTGGTTTCGCTGTCATTCATGATGCGGCCAGAGCAGGTTTCCTGGACACTTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS TCA 72 bp AGGTTCCCTTCATTATCCTCGATGTTAACATCAGCTTaGAACTCCAGCAAAGTCTGTAAAGTGTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: RFPSLSSMLTSA*NSSKVCKVSRK
Trigger: TTTCCTGGACACTTTACAGACTTTGCTGGAGTTTCAAGCTGATGTTAACATCGAGGATAATGAAGGGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2
CDS CAA 90 bp ATTTCCAAGTTTCATAACCTGCAGCGCAGTCCTTCCAAATCCATTTaGTGCATTGACGTTTACATTATTTTGCAACAAACTAGTAAGTTG +
Preference number: 6 (lower is better)
Translates to: ISKFHNLQRSPSKSI*CIDVYIILQQTSKL
Trigger: CAACTTACTAGTTTGTTGCAAAATAATGTAAACGTCAATGCACAAAATGGATTTGGAAGGACTGCGCTGCAGGTTATGAAACTTGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262662.5
ENST00000371761.4
ENST00000396148.2