RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKN2B (Homo sapiens)

Ensembl gene IDs: ENSG00000147883

Ensembl transcript IDs: ENST00000276925.7, ENST00000380142.5

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTATTCCCGGTCGGCTCCTCCTTCCTGTGAGTCTCAGACAGGCTTaGAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGCAGCCTTCAT +
Preference number: 1 (lower is better)
Translates to: VIPGRLLLPVSLRQA*RLTGFPPLPVGSLH
Trigger: ATGAAGGCTGCCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGGAAGGAGGAGCCGACCGGGAATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR TCA 90 bp TGTGACTTGCCATGCGCTCAAACTAAAGCGCCGCCGGGGACTTACTaGAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: CDLPCAQTKAPPGTY*SPPRPSSTLSSVFR
Trigger: CCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTTTAGTTTGAGCGCATGGCAAGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 90 bp GAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAGCGCCGCCGGGGACTTACTGAAGCC +
Preference number: 1 (lower is better)
Translates to: EGLQGFQRVSFTHVT*HALKLKRRRGLTEA
Trigger: GGCTTCAGTAAGTCCCCGGCGGCGCTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 90 bp CGTCGCTTGCACATCCTCTCTTACCCCTCTGCTATCTGGTGGAGTTaGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATG +
Preference number: 1 (lower is better)
Translates to: RRLHILSYPSAIWWS*ARVSRASRECRLRM
Trigger: CATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 90 bp AGCATCTGTCGTCGCTTGCACATCCTCTCTTACCCCTCTGCTATCTaGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGT +
Preference number: 1 (lower is better)
Translates to: SICRRLHILSYPSAI*WSWARVSRASRECR
Trigger: ACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 90 bp CATTGGAGTGAACGCATCGACTGCCGTCACCCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGA +
Preference number: 1 (lower is better)
Translates to: HWSERIDCRHPSANH*LLPLSAGVGDSSIG
Trigger: TCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACTCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 90 bp GCTCTGCAGCGTCGTGATCCAGGGATTTTAGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGA +
Preference number: 1 (lower is better)
Translates to: ALQRRDPGILASVVA*TSSLTPLLSGGVGR
Trigger: TCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGCTAAAATCCCTGGATCACGACGCTGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 90 bp ATCTGTCGTCGCTTGCACATCCTCTCTTACCCCTCTGCTATCTGGTaGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTA +
Preference number: 1 (lower is better)
Translates to: ICRRLHILSYPSAIW*SWARVSRASRECRL
Trigger: TAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR TCA 90 bp AAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTaGTCCAGGGATTTTAGCATCTGTCGTCGCTTGCACATCCTCTCT +
Preference number: 1 (lower is better)
Translates to: KSKGQHPVQRCSAAS*SRDFSICRRLHILS
Trigger: AGAGAGGATGTGCAAGCGACGACAGATGCTAAAATCCCTGGATCACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 90 bp TTACAATTGCTCTCACTCCACTCCACCACCTCATCCTGTGTAGTCTaGCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCA +
Preference number: 1 (lower is better)
Translates to: LQLLSLHSTTSSCVV*LRNPRESLLSVVRA
Trigger: TGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAGTGGAGTGAGAGCAATTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 90 bp CGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTaGAAAGGTGCTCTGCAGCGTCGTGATCCAGGGATTTTAGCATCT +
Preference number: 1 (lower is better)
Translates to: RESLLSVVRAKASIL*KGALQRRDPGILAS
Trigger: AGATGCTAAAATCCCTGGATCACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 90 bp TCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGGGCCTAAGTTGTaGGTTCACCATAACTCCTCAGCAGACATTGGAGTGAACGCATCG +
Preference number: 1 (lower is better)
Translates to: SSVFRFSFLPLGPKL*VHHNSSADIGVNAS
Trigger: CGATGCGTTCACTCCAATGTCTGCTGAGGAGTTATGGTGAACCCACAACTTAGGCCCTAGCGGCAGAAAGGAAAACCTGAAGACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR TCA 90 bp CACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTCCGCCGGGGACTTACTaGAGCCCACCTCGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: HLILCSLPAEPAGISPQCPPGTY*SPPRPS
Trigger: GGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGG...ACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp TGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGTGTGCGCAGGTACCCTaGAACGTCGCGGTGGCCCCG +
Preference number: 2 (lower is better)
Translates to: CESQTGLQAYRLSAAPRWCAQVP*NVAVAP
Trigger: CGGGGCCACCGCGACGTTGCAGGGTACCTGCGCACA...CCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380142.5
3UTR CAA 90 bp GGTTATTCCCGGTCGGCTCCTCCTTCCTGTGAGTCTCAGACAGGCTaGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGCAGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GYSRSAPPSCESQTG*QAYRLSAAPRWQPS
Trigger: TGAAGGCTGCCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGGAAGGAGGAGCCGACCGGGAATAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR TCA 90 bp AACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCCATGCACCGGTCGGGTaGGAGTGGCAGGGTCTGCGC +
Preference number: 2 (lower is better)
Translates to: NPRESLLSVVRAKASILCHAPVG*EWQGLR
Trigger: GCGCAGACCCTGCCACTCTCACCCGACCGGTGCATG...GCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380142.5
3UTR CAA 90 bp GTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTAGGTGGGTGGGGGTGGGAAATTGGG +
Preference number: 2 (lower is better)
Translates to: VSDRLAGLQAFRRSP*AAFIELGGWGWEIG
Trigger: CCCAATTTCCCACCCCCACCCACCTAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR TCA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCGGCTCCTCCTTCCTGTaGGTCTCAGACAGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: LSYPSAIWWSWARVSRASGSSFL*VSDRLA
Trigger: TGCAAGCCTGTCTGAGACTCACAGGAAGGAGGAGCC...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPASVVA*TSSLTP
Trigger: AGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGC...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCTCCTCAGCAGACATTaGAGTGAACGCATCGACTGC +
Preference number: 2 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPLLSRH*SERIDC
Trigger: GCAGTCGATGCGTTCACTCCAATGTCTGCTGAGGAG...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp GACATTGGAGTGAACGCATCGACTGCCGTCACCCAAGTGCTAATCACTGCCTTCGGCGTCAGTCCCCCGTaGCTGTGCGCAGGTACCCTG +
Preference number: 2 (lower is better)
Translates to: DIGVNASTAVTQVLITAFGVSPP*LCAGTL
Trigger: CAGGGTACCTGCGCACAGCCACGGGGGACTGACGCC...GAAGGCAGTGATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACTCCAATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380142.5
3UTR-3UTR CCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCTTCATCGAATTAGGTaGGTGGGGGTGGGAAATTGG +
Preference number: 2 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPLHRIR*VGVGNW
Trigger: CCAATTTCCCACCCCCACCCACCTAATTCGATGAAG...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTTACCCCTCTGCTATCTaGTGGAGTTGGGCGAGGGTC +
Preference number: 2 (lower is better)
Translates to: HLILCSLPAEPAGISPQCYPSAI*WSWARV
Trigger: GACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTA...ACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp TACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: YPSAIWWSWARVSRASREASVVA*TSSLTP
Trigger: AGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGC...CTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CAA 90 bp TCGTCGCTTGCACATCCTCTCTTACCCCTCTGCTATCTGGTGGAGTaGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCAT +
Preference number: 2 (lower is better)
Translates to: SSLAHPLLPLCYLVE*GEGLQGFQRVSFTH
Trigger: ATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGTCTCCCACTCAGCGCTaGAGTGGGAGATTCATCCAT +
Preference number: 2 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQSPTQR*SGRFIH
Trigger: ATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGA...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGCCTGCAACGTCGCGGTaGCCCCGCTCCTCGGCCAAG +
Preference number: 2 (lower is better)
Translates to: SHTPKYPWKSASLCFASWPATSR*PRSSAK
Trigger: CTTGGCCGAGGAGCGGGGCCACCGCGACGTTGCAGG...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380142.5
3UTR-3UTR GCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATAGTCTCAGACAGGCTTaGAGGCTTACAGGCTTTCCG +
Preference number: 2 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHSLRQA*RLTGFP
Trigger: CGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACT...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCAAAATAAAGTCGTTGTaGGCGGCTGGGGAACCTGGC +
Preference number: 2 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATKIKSL*AAGEPG
Trigger: GCCAGGTTCCCCAGCCGCCCACAACGACTTTATTTT...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCTAGGGCCTAAGTTGTaGGTTCACCATAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: LHHLILCSLPAEPAGISPLGPKL*VHHNSS
Trigger: TGAGGAGTTATGGTGAACCCACAACTTAGGCCCTAG...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAAAAATAAAGTCGTTGTaGGCGGCTGGGGAACCTGGC +
Preference number: 2 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLKIKSL*AAGEPG
Trigger: GCCAGGTTCCCCAGCCGCCCACAACGACTTTATTTT...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTACACTCAGCGCTGGAGTaGGAGATTCATCCATCGGAA +
Preference number: 2 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLHSALE*EIHPSE
Trigger: TTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTG...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAGTCTCAGACAGGCTTaGAGGCTTACAGGCTTTCCG +
Preference number: 2 (lower is better)
Translates to: PGLPESVVYACDLPCAQTSLRQA*RLTGFP
Trigger: CGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACT...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: PGLPESVVYACDLPCAQTPSANH*LLPLSA
Trigger: AGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGTGAACGCATCGACTaGCGTCACCCAAGTGCTAAT +
Preference number: 2 (lower is better)
Translates to: TSALLHFVLSLQVFLSAASERID*RHPSAN
Trigger: ATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACT...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAG +
Preference number: 2 (lower is better)
Translates to: LHHLILCSLPAEPAGISPFTHVT*HALKLK
Trigger: CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAA...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp TGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCGTTAACCGTTACAATTaGTCTCACTCCACTCCACCA +
Preference number: 2 (lower is better)
Translates to: CLRNPRESLLSVVRAKASVNRYN*SHSTPP
Trigger: TGGTGGAGTGGAGTGAGAGCAATTGTAACGGTTAAC...GCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp AACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCCTTCATCGAATTAGGTaGGTGGGGGTGGGAAATTGG +
Preference number: 2 (lower is better)
Translates to: NPRESLLSVVRAKASILCLHRIR*VGVGNW
Trigger: CCAATTTCCCACCCCCACCCACCTAATTCGATGAAG...GCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp GCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACGTCGTTGTGGGCGGCTaGGGAACCTGGCGTCAGTCC +
Preference number: 2 (lower is better)
Translates to: ACVCVCVCVCVKENVTVNVVVGG*GTWRQS
Trigger: GGACTGACGCCAGGTTCCCCAGCCGCCCACAACGAC...GTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380142.5
3UTR-3UTR GCA 90 bp CACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTGTCAAGGATTTCATATaGACTTTCCCTCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: HLILCSLPAEPAGISPQCVKDFI*TFPQKT
Trigger: GGTTTTCTGAGGGAAAGTGCATATGAAATCCTTGAC...ACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATACTCCTAAATATCCCTaGAAATCCGCTTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHTPKYP*KSASLC
Trigger: ACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGT...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp ATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTCACTCAGCGCTGGAGTaGGAGATTCATCCATCGGAA +
Preference number: 2 (lower is better)
Translates to: ISPQCSKSKGQHPVQRCSHSALE*EIHPSE
Trigger: TTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTG...AGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR TCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGCAGCAGACATTGGAGTaGACGCATCGACTGCCGTCA +
Preference number: 2 (lower is better)
Translates to: SHTPKYPWKSASLCFASWQQTLE*THRLPS
Trigger: TGACGGCAGTCGATGCGTTCACTCCAATGTCTGCTG...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp CTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATTGCTACATTTAAGAGCTGTACCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: LGVCTEFATVPLLHLRAVPSANH*LLPLSA
Trigger: AGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGG...TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp AGTGCACCTTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATAAAGGCCAGCATCCTGTaGAAAGGTGCTCTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: SAPLVCSVIVGHPTSHHIKASIL*KGALQR
Trigger: ACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTT...TATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAAGGTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR GCA 90 bp CCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCCACTCATCCTGTGTAGTCTaGCTGCGGAACCCGCGGGAA +
Preference number: 2 (lower is better)
Translates to: PLLHLRAVVLPHILTESHSSCVV*LRNPRE
Trigger: TTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGA...GTGGCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CCA 90 bp CTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATTGCTACATTTAAGAGCTGTATCTCCCACTCAGCGCTaGAGTGGGAGATTCATCCAT +
Preference number: 2 (lower is better)
Translates to: LGVCTEFATVPLLHLRAVSPTQR*SGRFIH
Trigger: ATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGA...TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR TCA 90 bp AGTGCACCTTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATGTCGTTTACGCATGTaGCTTGCCATGCGCTCAAAC +
Preference number: 2 (lower is better)
Translates to: SAPLVCSVIVGHPTSHHICRLRM*LAMRSN
Trigger: GTTTGAGCGCATGGCAAGTCACATGCGTAAACGACA...TATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAAGGTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR TCA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTCAGCAGACATTGGAGTaGACGCATCGACTGCCGTCA +
Preference number: 2 (lower is better)
Translates to: GARSRTHENSNYMFCMYPQQTLE*THRLPS
Trigger: TGACGGCAGTCGATGCGTTCACTCCAATGTCTGCTG...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR TCA 90 bp CAAGTCATAAGGGGATTTCCGCATCCTAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGAAGAAAACGTTACAGTTA +
Preference number: 2 (lower is better)
Translates to: QVIRGFPHPSMCVCVCVCVCVCV*KKTLQL
Trigger: TAACTGTAACGTTTTCTTTCACACACACACACACAC...ACACACACACACACACACACACATGCTAGGATGCGGAAATCCCCTTATGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CAA 90 bp GAAGAAAGCAATCTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATaGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAG +
Preference number: 2 (lower is better)
Translates to: EESNLGVCTEFATVP*LHLRAVVLPHILTE
Trigger: CTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAGATTGCTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR GCA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAG +
Preference number: 2 (lower is better)
Translates to: GARSRTHENSNYMFCMYPFTHVT*HALKLK
Trigger: CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAA...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR GCA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTTTCCCCAATAACATATaGTCTGATTCTCAACTAACT +
Preference number: 2 (lower is better)
Translates to: GARSRTHENSNYMFCMYPFPNNI*SDSQLT
Trigger: AGTTAGTTGAGAATCAGAGCATATGTTATTGGGGAA...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR TCA 72 bp CCATGCGCTCAAACTAAAGCGCCGCCGGGGACTTACTaGAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: PCAQTKAPPGTY*SPPRPSSTLSS
Trigger: TGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTTTAGTTTGAGCGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTA +
Preference number: 3 (lower is better)
Translates to: LHHLILCSLPAEPAGISPFRRSP*AAFIEL
Trigger: TAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAA...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp CATCTGTCGTCGCTTGCACATCCTCTCTTACCCCTCTaGTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: HLSSLAHPLLPL*YLVELGEGLQG
Trigger: GCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGACAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 72 bp CGCTTGCACATCCTCTCTTACCCCTCTGCTATCTGGTaGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: RLHILSYPSAIW*SWARVSRASRE
Trigger: CTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 72 bp CGTCGCTTGCACATCCTCTCTTACCCCTCTGCTATCTaGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: RRLHILSYPSAI*WSWARVSRASR
Trigger: TCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCGAGTCTCAGACAGGCTaGCAGGCTTACAGGCTTTCC +
Preference number: 3 (lower is better)
Translates to: LSYPSAIWWSWARVSRASESQTG*QAYRLS
Trigger: GGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTC...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp CTCTCACTCCACTCCACCACCTCATCCTGTGTAGTCTaGCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTA +
Preference number: 3 (lower is better)
Translates to: LSLHSTTSSCVV*LRNPRESLLSV
Trigger: TACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAGTGGAGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 72 bp CACATCCTCTCTTACCCCTCTGCTATCTGGTGGAGTTaGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGT +
Preference number: 3 (lower is better)
Translates to: HILSYPSAIWWS*ARVSRASRECR
Trigger: ACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR TCA 72 bp GGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTaGTCCAGGGATTTTAGCATCTGTCGTCGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: GQHPVQRCSAAS*SRDFSICRRLH
Trigger: GTGCAAGCGACGACAGATGCTAAAATCCCTGGATCACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp GAACGCATCGACTGCCGTCACCCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCA +
Preference number: 3 (lower is better)
Translates to: ERIDCRHPSANH*LLPLSAGVGDS
Trigger: TGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGGGTGACGGCAGTCGATGCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp CAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAGCGCCGCCGGGGACTT +
Preference number: 3 (lower is better)
Translates to: QGFQRVSFTHVT*HALKLKRRRGL
Trigger: AAGTCCCCGGCGGCGCTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATAAGAAAATAAAGTCGTaGTGGGCGGCTGGGGAACCT +
Preference number: 3 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHKKIKS*WAAGEP
Trigger: AGGTTCCCCAGCCGCCCACAACGACTTTATTTTCTT...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCGTTTACGCATGTGACTaGCCATGCGCTCAAACTAAA +
Preference number: 3 (lower is better)
Translates to: LSYPSAIWWSWARVSRASVYACD*PCAQTK
Trigger: TTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAAC...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp CTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTaGAAAGGTGCTCTGCAGCGTCGTGATCCAGGGATT +
Preference number: 3 (lower is better)
Translates to: LLSVVRAKASIL*KGALQRRDPGI
Trigger: AATCCCTGGATCACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTA +
Preference number: 3 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKFRRSP*AAFIEL
Trigger: TAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAA...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR GCA 72 bp CGTCGTGATCCAGGGATTTTAGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCTCTGCTATCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: RRDPGILASVVA*TSSLTPLLSGG
Trigger: TCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGCTAAAATCCCTGGATCACGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp ATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTCGGCCCTCCTCCACTTaGTCCTCAGTCTTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: ISPQCSKSKGQHPVQRCSRPSST*SSVFRF
Trigger: AAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCG...AGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp CAAGTCATAAGGGGATTTCCGCATCCTAGCATGTGTGTGTGTGTGTGTGTGTGTCGGCCCTCCTCCACTTaGTCCTCAGTCTTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: QVIRGFPHPSMCVCVCVCRPSST*SSVFRF
Trigger: AAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCG...ACACACACACACACACACACACATGCTAGGATGCGGAAATCCCCTTATGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGTTTACGCATGTGACTaGCCATGCGCTCAAACTAAA +
Preference number: 3 (lower is better)
Translates to: SVVRAKASILCKGALQRRVYACD*PCAQTK
Trigger: TTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAAC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 72 bp TTCAGGTTTTCCTTTCTGCCGCTAGGGCCTAAGTTGTaGGTTCACCATAACTCCTCAGCAGACATTGGAGTG +
Preference number: 3 (lower is better)
Translates to: FRFSFLPLGPKL*VHHNSSADIGV
Trigger: CACTCCAATGTCTGCTGAGGAGTTATGGTGAACCCACAACTTAGGCCCTAGCGGCAGAAAGGAAAACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGAAGAAAATAAAGTCGTaGTGGGCGGCTGGGGAACCT +
Preference number: 3 (lower is better)
Translates to: SHTPKYPWKSASLCFASWKKIKS*WAAGEP
Trigger: AGGTTCCCCAGCCGCCCACAACGACTTTATTTTCTT...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR-3UTR CAA 90 bp GCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCCGCTAGGGCCTAAGTaGTGGGTTCACCATAACTCC +
Preference number: 3 (lower is better)
Translates to: ACVCVCVCVCVKENVTVNPLGPK*WVHHNS
Trigger: GGAGTTATGGTGAACCCACAACTTAGGCCCTAGCGG...GTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CCA 72 bp GTATCATTCATGATTTTGGAGGACAAGCTGGTGCAATaGGAAGAAAAGCAAGACAACCATAATCAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: VSFMILEDKLVQ*EEKQDNHNQLW
Trigger: CCACAGCTGATTATGGTTGTCTTGCTTTTCTTCCCATTGCACCAGCTTGTCCTCCAAAATCATGAATGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR CAA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGGCGTTTGCACTGAGTTaGCAACAGTGCCATTGCTAC +
Preference number: 3 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKAFALS*QQCHCY
Trigger: GTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGC...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR-3UTR CAA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTCAGTGCACCTTTAGTTaGTTCAGTGATAGTAGGACA +
Preference number: 3 (lower is better)
Translates to: GARSRTHENSNYMFCMYPQCTFS*FSDSRT
Trigger: TGTCCTACTATCACTGAACAAACTAAAGGTGCACTG...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR TCA 72 bp GCAATTATTACAAACATTGAGAGAAGGGAACCCCTGTaGACCTTTAACATTTCTCAGGAGTTAGTGGTAAAC +
Preference number: 3 (lower is better)
Translates to: AIITNIERREPL*TFNISQELVVN
Trigger: GTTTACCACTAACTCCTGAGAAATGTTAAAGGTTCACAGGGGTTCCCTTCTCTCAATGTTTGTAATAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR GCA 72 bp AAAAGCAAGACAACCATAATCAGCTGTGGAACTAGATaGACTTCTTTGTGCATCCATGGAATGAATATCTTG +
Preference number: 3 (lower is better)
Translates to: KSKTTIISCGTR*TSLCIHGMNIL
Trigger: CAAGATATTCATTCCATGGATGCACAAAGAAGTGCATCTAGTTCCACAGCTGATTATGGTTGTCTTGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp GGCGGCTGGGGAACCTGGCGTCAGTCCCCCGTGGCTGTGCGCAGGTACCCTGCACGTCCTTCTGCGGCTTaGGGCCCCGTGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGWGTWRQSPVAVRRYPARPSAA*GPVQWP
Trigger: CGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACG...TGCAGGGTACCTGCGCACAGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS-3UTR TCA 90 bp CGTTGTGGGCGGCTGGGGAACCTGGCGTCAGTCCCCCGTGGCTGTGCGCAGGTACCGCCGGGGACTTACTaGAGCCCACCTCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RCGRLGNLASVPRGCAQVPPGTY*SPPRPS
Trigger: GGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGG...TACCTGCGCACAGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCCCACAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS-3UTR CCA 90 bp GGCGGCTGGGGAACCTGGCGTCAGTCCCCCGTGGCTGTGCGCAGGTACCCTGCAGGGGCCCCAGCTACCTaGATCGCGCGCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: GGWGTWRQSPVAVRRYPAGAPAT*IARLPK
Trigger: TTTCGGGAGGCGCGCGATCCAGGTAGCTGGGGCCCC...TGCAGGGTACCTGCGCACAGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS-3UTR TCA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCATGCACCGGTCGGGTaGGAGTGGCAGGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LHHLILCSLPAEPAGISPHAPVG*EWQGLR
Trigger: GCGCAGACCCTGCCACTCTCACCCGACCGGTGCATG...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp TGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGTCGCGGAGTCCTCACTaGCCCGCCTCGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CESQTGLQAYRLSAAPRWSRSPH*PASLWQ
Trigger: CTGCCAGAGCGAGGCGGGGCAGTGAGGACTCCGCGA...CCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp GGCGGCTGGGGAACCTGGCGTCAGTCCCCCGTGGCTGTGCGCAGGTACCCTGCAAGTCTCAGACAGGCTTaGAGGCTTACAGGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: GGWGTWRQSPVAVRRYPASLRQA*RLTGFP
Trigger: CGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACT...TGCAGGGTACCTGCGCACAGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS-3UTR TCA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTGCCTCCCGAAACGGTTaGCTCCGTTGGGATCCGCGC +
Preference number: 4 (lower is better)
Translates to: LHHLILCSLPAEPAGISPASRNG*LRWDPR
Trigger: GCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGC...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCGGGCGCGCCTGGATTaGTTCTGGGAAAAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPRARLD*FWEKAP
Trigger: AGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCG...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp TACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGCGCCCCCACTGGGCATaGCCTTGTTCTCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: YPSAIWWSWARVSRASRERPHWA*PCSPRA
Trigger: TGCGCGAGGAGAACAAGGGCATGCCCAGTGGGGGCG...CTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCCGCTGCCGCCCCCACTaGGCATGCCCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSYPSAIWWSWARVSRASRCRPH*ACPCSP
Trigger: AGGAGAACAAGGGCATGCCCAGTGGGGGCGGCAGCG...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCTGCCGGCGAGGCCCTaGGGCCCCAGCTACCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATLPARP*GPSYLD
Trigger: ATCCAGGTAGCTGGGGCCCCAGGGCCTCGCCGGCAG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS-3UTR GCA 90 bp GGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACCGCCCCCACTGGGCATaGCCTTGTTCTCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GVGRGSPGLPESVVYACDRPHWA*PCSPRA
Trigger: TGCGCGAGGAGAACAAGGGCATGCCCAGTGGGGGCG...GTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTTCATCCTGTGTAGTCTaGCTGCGGAACCCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPSSCVV*LRNPRE
Trigger: TTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGA...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTTGGGGCCCCGTGCAGTaGCCGAGCGGCCGGTCGTTA +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAAWGPVQ*PSGRSL
Trigger: TAACGACCGGCCGCTCGGCCACTGCACGGGGCCCCA...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGGCGTCAGTCCCCCGTaGCTGTGCGCAGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHGVSPP*LCAGTL
Trigger: CAGGGTACCTGCGCACAGCCACGGGGGACTGACGCC...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CAA 72 bp AGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTAGGTGGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLAGLQAFRRSP*AAFIELGGWGW
Trigger: CCACCCCCACCCACCTAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGCTCAAAGCCGCTCTaGCCGCAGGGTGCGGACGCG +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAASSKPL*PQGADA
Trigger: CGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCT...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTCGTCCTTCTGCGGCTTaGGGCCCCGTGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRRPSAA*GPVQWP
Trigger: CGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACG...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGGCGTCAGTCCCCCGTaGCTGTGCGCAGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLGVSPP*LCAGTL
Trigger: CAGGGTACCTGCGCACAGCCACGGGGGACTGACGCC...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCTCCCGTCGTCCTTCTaGGGCTTGGGGCCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTLPSSF*GLGPRA
Trigger: TGCACGGGGCCCCAAGCCGCAGAAGGACGACGGGAG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp AAGCGCCGCCGGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KRRRGLTEAHLGPPPLCPPSANH*LLPLSA
Trigger: AGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGG...AGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGGCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTAGCTCAAAGCCGCTCTaGCCGCAGGGTGCGGACGCG +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRSSKPL*PQGADA
Trigger: CGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCT...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCGCTCCGGGCTTTTCCTaGCGCTCAAGAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATAPGFS*RSRTSG
Trigger: CCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGAGC...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CAA 72 bp GCACATCCTCTCTTACCCCTCTGCTATCTGGTGGAGTaGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCG +
Preference number: 4 (lower is better)
Translates to: AHPLLPLCYLVE*GEGLQGFQRVS
Trigger: CGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGGATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp TGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGCAGCAGACATTGGAGTaGACGCATCGACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CESQTGLQAYRLSAAPRWQQTLE*THRLPS
Trigger: TGACGGCAGTCGATGCGTTCACTCCAATGTCTGCTG...CCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGCCGCCGGGGACTTACTaGAGCCCACCTCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKPPGTY*SPPRPS
Trigger: GGAGGGCCGAGGTGGGCTTCAGTAAGTCCCCGGCGG...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGTCATCCTGTGTAGTCTaGCTGCGGAACCCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQSSCVV*LRNPRE
Trigger: TTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGA...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTCCCATCATCATGACCTaGATCGCGCGCCTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: HLILCSLPAEPAGISPQCPIIMT*IARLPK
Trigger: TTTCGGGAGGCGCGCGATCCAGGTCATGATGATGGG...ACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGTCGTTGTGGGCGGCTaGGGAACCTGGCGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRVVVGG*GTWRQS
Trigger: GGACTGACGCCAGGTTCCCCAGCCGCCCACAACGAC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCCCTCTGCTATCTGGTaGAGTTGGGCGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATPSAIW*SWARVS
Trigger: GGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp ATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTCATGCACCGGTCGGGTaGGAGTGGCAGGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: ISPQCSKSKGQHPVQRCSHAPVG*EWQGLR
Trigger: GCGCAGACCCTGCCACTCTCACCCGACCGGTGCATG...AGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp AACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCCCTTCTTTCCCACGCTaGTCCGGCGCACTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NPRESLLSVVRAKASILCPSFPR*SGALSP
Trigger: AGGAGAGAGTGCGCCGGAGCAGCGTGGGAAAGAAGG...GCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGTGTGCGCAGGTACCCTaGAACGTCGCGGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKCAQVP*NVAVAP
Trigger: CGGGGCCACCGCGACGTTGCAGGGTACCTGCGCACA...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCGCCTGGATTGCTTCTaGGAAAAAGCGCCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATRLDCF*EKAPSA
Trigger: CGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCACCAGCGGGCGCGCCTaGATTGCTTCTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATTSGRA*IASGKK
Trigger: CTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGT...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGCTCCGGGCTTTTCCTaGCGCTCAAGAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRAPGFS*RSRTSG
Trigger: CCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGAGC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCCACTCAGCGCTGGAGTaGGAGATTCATCCATCGGAA +
Preference number: 4 (lower is better)
Translates to: LSYPSAIWWSWARVSRASHSALE*EIHPSE
Trigger: TTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTG...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTGCTATCTGGTGGAGTTaGGCGAGGGTCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAAAIWWS*ARVSRA
Trigger: AGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGC...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCTACCCCTCTGCTATCTaGTGGAGTTGGGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLQGFQRVSFTHVTCHALYPSAI*WSWARV
Trigger: GACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTA...GAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
3UTR CAA 72 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTaGCCATGCGCTCAAACTAAAGCGCCGCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACD*PCAQTKAPPGT
Trigger: AGTCCCCGGCGGCGCTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCGGGCGCGCCTGGATTaGTTCTGGGAAAAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTRARLD*FWEKAP
Trigger: AGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCTGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTAGTGAACGCATCGACTaGCGTCACCCAAGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: PVSLRQACRLTGFPPLPVSERID*RHPSAN
Trigger: ATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACT...AACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCCCTCTCTTACCCCTCTaGTATCTGGTGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLQGFQRVSFTHVTCHALPLLPL*YLVELG
Trigger: GCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGG...GAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: GVGRGSPGLPESVVYACDASVVA*TSSLTP
Trigger: AGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGC...GTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATAAGGCCAGCATCCTGTaGAAAGGTGCTCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHKASIL*KGALQR
Trigger: ACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTT...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp TGCCTGCGGAACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCTCTCCCACTCAGCGCTaGAGTGGGAGATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: CLRNPRESLLSVVRAKASSPTQR*SGRFIH
Trigger: ATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGA...GCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTTCCGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGCTATCTGGTGGAGTTaGGCGAGGGTCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRAIWWS*ARVSRA
Trigger: AGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCTGCTCTGCAGCGTCGTaGTCCAGGGATTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATCSAAS*SRDFSI
Trigger: GATGCTAAAATCCCTGGATCACGACGCTGCAGAGCA...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACAGTGAACGCATCGACTaGCGTCACCCAAGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: GVGRGSPGLPESVVYACDSERID*RHPSAN
Trigger: ATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACT...GTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAAGGCCAGCATCCTGTaGAAAGGTGCTCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAAKASIL*KGALQR
Trigger: ACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTT...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATCTCCTCAGCAGACATTaGAGTGAACGCATCGACTGC +
Preference number: 4 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHLLSRH*SERIDC
Trigger: GCAGTCGATGCGTTCACTCCAATGTCTGCTGAGGAG...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTTACCCCTCTGCTATCTaGTGGAGTTGGGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTYPSAI*WSWARV
Trigger: GACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTA...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCTGTCGTTTACGCATGTaGCTTGCCATGCGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATCRLRM*LAMRSN
Trigger: GTTTGAGCGCATGGCAAGTCACATGCGTAAACGACA...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp GGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTCTAGGCGTTTGCACTaGGTTTGCAACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: GVGRGSPGLPESVVYACDSRRLH*VCNSAI
Trigger: AATGGCACTGTTGCAAACTCAGTGCAAACGCCTAGA...GTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTACCAAGTGCTAATCACTaGCTTCTCCCACTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLPSANH*LLPLSA
Trigger: AGCGCTGAGTGGGAGAAGGCAGTGATTAGCACTTGG...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CTGCCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTGCATGTGACTTGCCATaGGCTCAAACTAAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: LPSPTQRWSGRFIHRKIRACDLP*AQTKAP
Trigger: CGGCGCTTTAGTTTGAGCGCATGGCAAGTCACATGC...ACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACTGGGGCCCCGTGCAGTaGCCGAGCGGCCGGTCGTTA +
Preference number: 4 (lower is better)
Translates to: ACVCVCVCVCVKENVTVNWGPVQ*PSGRSL
Trigger: TAACGACCGGCCGCTCGGCCACTGCACGGGGCCCCA...GTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCGTGGCGGCTGGGGAACCTaGCGTCAGTCCCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVKENVTVNRGGWGT*RQSPVA
Trigger: AGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCC...ACGGTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp TTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGGGCCTAAGTTGTGGGTTCGCCTGGATTGCTTCTaGGAAAAAGCGCCTAGCGCG +
Preference number: 4 (lower is better)
Translates to: LSSVFRFSFLPLGPKLWVRLDCF*EKAPSA
Trigger: CGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCG...AACCCACAACTTAGGCCCTAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GACATTGGAGTGAACGCATCGACTGCCGTCACCCAAGTGCTAATCACTGCCTTCAAAATAAAGTCGTTGTaGGCGGCTGGGGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: DIGVNASTAVTQVLITAFKIKSL*AAGEPG
Trigger: GCCAGGTTCCCCAGCCGCCCACAACGACTTTATTTT...GAAGGCAGTGATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACTCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCTCCTCAGCAGACATTaGAGTGAACGCATCGACTGC +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTLLSRH*SERIDC
Trigger: GCAGTCGATGCGTTCACTCCAATGTCTGCTGAGGAG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCGTGCCTCCCGAAACGGTTaGCTCCGTTGGGATCCGCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVKENVTVNRASRNG*LRWDPR
Trigger: GCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGC...ACGGTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp TTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGGGCCTAAGTTGTGGGTTCAGCAGACATTGGAGTaGACGCATCGACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LSSVFRFSFLPLGPKLWVQQTLE*THRLPS
Trigger: TGACGGCAGTCGATGCGTTCACTCCAATGTCTGCTG...AACCCACAACTTAGGCCCTAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp CTGCCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTTCTAGGCGTTTGCACTaGGTTTGCAACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: LPSPTQRWSGRFIHRKIRSRRLH*VCNSAI
Trigger: AATGGCACTGTTGCAAACTCAGTGCAAACGCCTAGA...ACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGCCTCTCTTACCCCTCTaGTATCTGGTGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKPLLPL*YLVELG
Trigger: GCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAGG...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp ATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTTGTGCAAAGGTGCTCTaGAGCGTCGTGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ISPQCSKSKGQHPVQRCSCAKVL*SVVIQG
Trigger: TCCCTGGATCACGACGCTGCAGAGCACCTTTGCACA...AGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CTGCCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTTGGAGGACAAGCTGGTaGAATGGGAAGAAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LPSPTQRWSGRFIHRKIRWRTSW*NGKKSK
Trigger: CTTGCTTTTCTTCCCATTGCACCAGCTTGTCCTCCA...ACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTCTAGGGCCTAAGTTGTaGGTTCACCATAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAALGPKL*VHHNSS
Trigger: TGAGGAGTTATGGTGAACCCACAACTTAGGCCCTAG...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCCTCATTGTCCTCATCTaGGAAACAATACCTATCTCT +
Preference number: 4 (lower is better)
Translates to: LSYPSAIWWSWARVSRASLIVLI*ETIPIS
Trigger: AGAGATAGGTATTGTTTCCCAGATGAGGACAATGAG...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCGACAAGCTGGTGCAATaGGAAGAAAAGCAAGACAAC +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATDKLVQ*EEKQDN
Trigger: GTTGTCTTGCTTTTCTTCCCATTGCACCAGCTTGTC...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGGGCTCCTCCTTCCTGTaGGTCTCAGACAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SHTPKYPWKSASLCFASWGSSFL*VSDRLA
Trigger: TGCAAGCCTGTCTGAGACTCACAGGAAGGAGGAGCC...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGAATATTTCTTAGTCTaGCCTCTGCACCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLEYFLV*PLHPET
Trigger: TGTCTCAGGGTGCAGAGGTCAGACTAAGAAATATTC...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTGAATATTTCTTAGTCTaGCCTCTGCACCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAAEYFLV*PLHPET
Trigger: TGTCTCAGGGTGCAGAGGTCAGACTAAGAAATATTC...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp AAGTTACTTGATATTTCTTTGCCTCATTGTCCTCATCTGGGAAACAATACCTATGCTCTGGCCGCAGGGTaGGGACGCGTCGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KLLDISLPHCPHLGNNTYALAAG*GRVAES
Trigger: GGACTCCGCGACGCGTCCGCACCCTGCGGCCAGAGC...ATAGGTATTGTTTCCCAGATGAGGACAATGAGGCAAAGAAATATCAAGTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp CTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATTGCTACATTTAAGAGCTGTACCTTCTTTCCCACGCTaGTCCGGCGCACTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGVCTEFATVPLLHLRAVPSFPR*SGALSP
Trigger: AGGAGAGAGTGCGCCGGAGCAGCGTGGGAAAGAAGG...TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp TTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGGGCCTAAGTTGTGGGTTAGTCTCAGACAGGCTTaGAGGCTTACAGGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LSSVFRFSFLPLGPKLWVSLRQA*RLTGFP
Trigger: CGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACT...AACCCACAACTTAGGCCCTAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTAGTTAACCGTTACAATTaGTCTCACTCCACTCCACCA +
Preference number: 4 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLVNRYN*SHSTPP
Trigger: TGGTGGAGTGGAGTGAGAGCAATTGTAACGGTTAAC...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CTGCCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTGTTAACCGTTACAATTaGTCTCACTCCACTCCACCA +
Preference number: 4 (lower is better)
Translates to: LPSPTQRWSGRFIHRKIRVNRYN*SHSTPP
Trigger: TGGTGGAGTGGAGTGAGAGCAATTGTAACGGTTAAC...ACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTCCTGCAACGTCGCGGTaGCCCCGCTCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GARSRTHENSNYMFCMYPPATSR*PRSSAK
Trigger: CTTGGCCGAGGAGCGGGGCCACCGCGACGTTGCAGG...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGGGCGGCTGGGGAACCTaGCGTCAGTCCCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKGGWGT*RQSPVA
Trigger: AGCCACGGGGGACTGACGCCAGGTTCCCCAGCCGCC...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCTAGGGCCTAAGTTGTaGGTTCACCATAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTLGPKL*VHHNSS
Trigger: TGAGGAGTTATGGTGAACCCACAACTTAGGCCCTAG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp CTCTCTTACCCCTCTGCTATCTGGTGGAGTTGGGCGAGGGTCTCCAGGGCTTCCATGATCAAGCAACCCTaGAAATTAAATCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSYPSAIWWSWARVSRASMIKQP*KLNPKA
Trigger: TGCTTTGGGATTTAATTTCCAGGGTTGCTTGATCAT...GGAAGCCCTGGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGGGTAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGTGTGTGTGTGTGTGTaGAAGAAAACGTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHVCVCV*KKTLQL
Trigger: TAACTGTAACGTTTTCTTTCACACACACACACACAC...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGTGTGCGCAGGTACCCTaGAACGTCGCGGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKCAQVP*NVAVAP
Trigger: CGGGGCCACCGCGACGTTGCAGGGTACCTGCGCACA...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCGTCAAGGATTTCATATaGACTTTCCCTCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATVKDFI*TFPQKT
Trigger: GGTTTTCTGAGGGAAAGTGCATATGAAATCCTTGAC...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CAAGTCATAAGGGGATTTCCGCATCCTAGCATGTGTGTGTGTGTGTGTGTGTGTGCATGTGACTTGCCATaGGCTCAAACTAAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QVIRGFPHPSMCVCVCVCACDLP*AQTKAP
Trigger: CGGCGCTTTAGTTTGAGCGCATGGCAAGTCACATGC...ACACACACACACACACACACACATGCTAGGATGCGGAAATCCCCTTATGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAGCAATCTAGGCGTTTaGACTGAGTTTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTSNLGV*TEFATV
Trigger: CACTGTTGCAAACTCAGTGCAAACGCCTAGATTGCT...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGTATTTTCTGTCCCTGTaGTTCAGTTTGAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQYFLSL*FSLKME
Trigger: CTCCATTTTCAAACTGAAGCACAGGGACAGAAAATA...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTACTCCTAAATATCCCTaGAAATCCGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAATPKYP*KSASLC
Trigger: ACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGT...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCCCTCTGCTATCTGGTaGAGTTGGGCGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ACVCVCVCVCVKENVTVNPSAIW*SWARVS
Trigger: GGAGACCCTCGCCCAACTCCACCAGATAGCAGAGGG...GTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp AACCCGCGGGAATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAATTATTACAAACATTaGGAGAAGGGAACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: NPRESLLSVVRAKASILCNYYKH*EKGTPV
Trigger: CACAGGGGTTCCCTTCTCTCAATGTTTGTAATAATT...GCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGATTCCCGCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTTGTGCATCCATGGAATaGATATCTTGTAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: TSALLHFVLSLQVFLSAACASME*ISCNLW
Trigger: CCAAAGGTTACAAGATATTCATTCCATGGATGCACA...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTCATGTGTATCATTCATaGTTTTGGAGGACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGLPESVVYACDLPCAQTHVYHS*FWRTSW
Trigger: CCAGCTTGTCCTCCAAAATCATGAATGATACACATG...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp GACATTGGAGTGAACGCATCGACTGCCGTCACCCAAGTGCTAATCACTGCCTTCTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAG +
Preference number: 4 (lower is better)
Translates to: DIGVNASTAVTQVLITAFFTHVT*HALKLK
Trigger: CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAA...GAAGGCAGTGATTAGCACTTGGGTGACGGCAGTCGATGCGTTCACTCCAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGCTTTCCAGATCTTCTTaGAATAAATGTCAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQLSRSS*NKCQVV
Trigger: TACTACCTGACATTTATTCCAAGAAGATCTGGAAAG...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGTGTGTGTGTGTGTGTaGAAGAAAACGTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRVCVCV*KKTLQL
Trigger: TAACTGTAACGTTTTCTTTCACACACACACACACAC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp CCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTATCCTCACATTTTAACTaGGAGCCACTAGTTATGTTA +
Preference number: 4 (lower is better)
Translates to: PRPSSTLSSVFRFSFLPLSSHFN*EPLVML
Trigger: TAACATAACTAGTGGCTCTCAGTTAAAATGTGAGGA...TAGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGAGCAATCTAGGCGTTTaGACTGAGTTTGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKSNLGV*TEFATV
Trigger: CACTGTTGCAAACTCAGTGCAAACGCCTAGATTGCT...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AAGTTACTTGATATTTCTTTGCCTCATTGTCCTCATCTGGGAAACAATACCTATCGCTGCCGCCCCCACTaGGCATGCCCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLLDISLPHCPHLGNNTYRCRPH*ACPCSP
Trigger: AGGAGAACAAGGGCATGCCCAGTGGGGGCGGCAGCG...ATAGGTATTGTTTCCCAGATGAGGACAATGAGGCAAAGAAATATCAAGTAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGCTTCATCGAATTAGGTaGGTGGGGGTGGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: SHTPKYPWKSASLCFASWLHRIR*VGVGNW
Trigger: CCAATTTCCCACCCCCACCCACCTAATTCGATGAAG...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTTCCTCACATTTTAACTaGGAGCCACTAGTTATGTTA +
Preference number: 4 (lower is better)
Translates to: SVVRAKASILCKGALQRRSSHFN*EPLVML
Trigger: TAACATAACTAGTGGCTCTCAGTTAAAATGTGAGGA...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGACAGCTAAACCTGTCTaGCAGGTGGCTTCGAAAATG +
Preference number: 4 (lower is better)
Translates to: SHTPKYPWKSASLCFASWTAKPV*QVASKM
Trigger: CATTTTCGAAGCCACCTGGCAGACAGGTTTAGCTGT...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCGTCACTCAGCGCTGGAGTaGGAGATTCATCCATCGGAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVKENVTVNRHSALE*EIHPSE
Trigger: TTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTG...ACGGTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp AGTGCACCTTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATCTCCCACTCAGCGCTaGAGTGGGAGATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SAPLVCSVIVGHPTSHHISPTQR*SGRFIH
Trigger: ATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGA...TATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAAGGTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp CAAGTCATAAGGGGATTTCCGCATCCTAGCATGTGTGTGTGTGTGTGTGTGTGTTTTACGCATGTGACTTaGCATGCGCTCAAACTAAAG +
Preference number: 4 (lower is better)
Translates to: QVIRGFPHPSMCVCVCVCFTHVT*HALKLK
Trigger: CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAA...ACACACACACACACACACACACATGCTAGGATGCGGAAATCCCCTTATGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR GCA 90 bp CAAGTCATAAGGGGATTTCCGCATCCTAGCATGTGTGTGTGTGTGTGTGTGTGTGTCAAGGATTTCATATaGACTTTCCCTCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: QVIRGFPHPSMCVCVCVCVKDFI*TFPQKT
Trigger: GGTTTTCTGAGGGAAAGTGCATATGAAATCCTTGAC...ACACACACACACACACACACACATGCTAGGATGCGGAAATCCCCTTATGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CCA 90 bp GTGCCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCCTTCATCGAATTAGGTaGGTGGGGGTGGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: VPLLHLRAVVLPHILTESLHRIR*VGVGNW
Trigger: CCAATTTCCCACCCCCACCCACCTAATTCGATGAAG...GCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGTGCTCTGCAGCGTCGTaGTCCAGGGATTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKCSAAS*SRDFSI
Trigger: GATGCTAAAATCCCTGGATCACGACGCTGCAGAGCA...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGGCATCTGTCGTCGCTTaGACATCCTCTCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKASVVA*TSSLTP
Trigger: AGGGGTAAGAGAGGATGTGCAAGCGACGACAGATGC...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGTACTTGATATTTCTTTaGCTCATTGTCCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SHTPKYPWKSASLCFASWYLIFL*LIVLIW
Trigger: CCAGATGAGGACAATGAGGCAAAGAAATATCAAGTA...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
3UTR CAA 72 bp AATCTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATaGCTACATTTAAGAGCTGTAGTTCTTCCTCACATT +
Preference number: 4 (lower is better)
Translates to: NLGVCTEFATVP*LHLRAVVLPHI
Trigger: AATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR TCA 90 bp AAGTTACTTGATATTTCTTTGCCTCATTGTCCTCATCTGGGAAACAATACCTATTGTCGTTTACGCATGTaGCTTGCCATGCGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KLLDISLPHCPHLGNNTYCRLRM*LAMRSN
Trigger: GTTTGAGCGCATGGCAAGTCACATGCGTAAACGACA...ATAGGTATTGTTTCCCAGATGAGGACAATGAGGCAAAGAAATATCAAGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR TCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGAGAAGGGAACCCCTGTaGACCTTTAACATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKRREPL*TFNISQ
Trigger: CTGAGAAATGTTAAAGGTTCACAGGGGTTCCCTTCT...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAGAAAACGTTACAGTTAACCGTTTCCCCAATAACATATaGTCTGATTCTCAACTAACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVKENVTVNRFPNNI*SDSQLT
Trigger: AGTTAGTTGAGAATCAGAGCATATGTTATTGGGGAA...ACGGTTAACTGTAACGTTTTCTTTCACACACACACACACACACACACACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR GCA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTAGCTGTGGAACTAGATaGACTTCTTTGTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: GARSRTHENSNYMFCMYPSCGTR*TSLCIH
Trigger: ATGGATGCACAAAGAAGTGCATCTAGTTCCACAGCT...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CCA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGACTCCTAAATATCCCTaGAAATCCGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKTPKYP*KSASLC
Trigger: ACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGT...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CCA 90 bp CCCGCGCCGCGGCGCTGGCCAGACCCTCATCGCTGCCGCCCCCACTaGGCATGCCCTTGTTCTCCTCGCGCATTCCGCAGCCCCCAGACG +
Preference number: 5 (lower is better)
Translates to: PAPRRWPDPHRCRPH*ACPCSPRAFRSPQT
Trigger: CGTCTGGGGGCTGCGGAATGCGCGAGGAGAACAAGGGCATGCCCAGTGGGGGCGGCAGCGATGAGGGTCTGGCCAGCGCCGCGGCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS GCA 90 bp CCTAGCGCGGACGCAGCCGAGCTCAAAGCCGCTCTGGCCGCAGGGTaGGGACGCGTCGCGGAGTCCTCACTGCCCCGCCTCGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PSADAAELKAALAAG*GRVAESSLPRLALA
Trigger: TGCCAGAGCGAGGCGGGGCAGTGAGGACTCCGCGACGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCTCGGCTGCGTCCGCGCTAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CCA 90 bp GGGAAAAAGCGCCTAGCGCGGACGCAGCCGAGCTCAAAGCCGCTCTaGCCGCAGGGTGCGGACGCGTCGCGGAGTCCTCACTGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: GKKRLARTQPSSKPL*PQGADASRSPHCPA
Trigger: GGCGGGGCAGTGAGGACTCCGCGACGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCTCGGCTGCGTCCGCGCTAGGCGCTTTTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS TCA 90 bp GCCCTGGGGCCCCAGCTACCTGGATCGCGCGCCTCCCGAAACGGTTaGCTCCGTTGGGATCCGCGCCGGCTTCCAGGAGCTGTCGCACCT +
Preference number: 5 (lower is better)
Translates to: ALGPQLPGSRASRNG*LRWDPRRLPGAVAP
Trigger: AGGTGCGACAGCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTAGCTGGGGCCCCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS CCA 90 bp GACCTGGGCTCAGCTTCATTACCCTCCCGTCGTCCTTCTGCGGCTTaGGGCCCCGTGCAGTGGCCGAGCGGCCGGTCGTTAGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: DLGSASLPSRRPSAA*GPVQWPSGRSLAPG
Trigger: GCCCGGAGCTAACGACCGGCCGCTCGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACGACGGGAGGGTAATGAAGCTGAGCCCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS GCA 90 bp CCTAGGAGACCTGGGCTCAGCTTCATTACCCTCCCGTCGTCCTTCTaGGGCTTGGGGCCCCGTGCAGTGGCCGAGCGGCCGGTCGTTAGC +
Preference number: 5 (lower is better)
Translates to: PRRPGLSFITLPSSF*GLGPRAVAERPVVS
Trigger: GCTAACGACCGGCCGCTCGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACGACGGGAGGGTAATGAAGCTGAGCCCAGGTCTCCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 90 bp CCCGTGCAGTGGCCGAGCGGCCGGTCGTTAGCTCCGGGCTTTTCCTaGCGCTCAAGAACCAGCGGGCGCGCCTGGATTGCTTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PVQWPSGRSLAPGFS*RSRTSGRAWIASGK
Trigger: TTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGAGCTAACGACCGGCCGCTCGGCCACTGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 90 bp TTAGCTCCGGGCTTTTCCTGGCGCTCAAGAACCAGCGGGCGCGCCTaGATTGCTTCTGGGAAAAAGCGCCTAGCGCGGACGCAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: LAPGFSWRSRTSGRA*IASGKKRLARTQPS
Trigger: GCTCGGCTGCGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGAGCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS GCA 90 bp TCCGGGCTTTTCCTGGCGCTCAAGAACCAGCGGGCGCGCCTGGATTaGTTCTGGGAAAAAGCGCCTAGCGCGGACGCAGCCGAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: SGLFLALKNQRARLD*FWEKAPSADAAELK
Trigger: TTTGAGCTCGGCTGCGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 90 bp CTTTTCCTGGCGCTCAAGAACCAGCGGGCGCGCCTGGATTGCTTCTaGGAAAAAGCGCCTAGCGCGGACGCAGCCGAGCTCAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LFLALKNQRARLDCF*EKAPSADAAELKAA
Trigger: AGCGGCTTTGAGCTCGGCTGCGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCTGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGCGGGCGCGCCTGGATaGCTTCTGGGAAAAAGCGCC +
Preference number: 5 (lower is better)
Translates to: PVSLRQACRLTGFPPLPVAGAPG*LLGKSA
Trigger: GGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGC...AACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCG +
Preference number: 5 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATRLPKR*TPLGSA
Trigger: CGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCTGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTA +
Preference number: 5 (lower is better)
Translates to: PVSLRQACRLTGFPPLPVFRRSP*AAFIEL
Trigger: TAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAA...AACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCTGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGAGTCTCAGACAGGCTaGCAGGCTTACAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: PVSLRQACRLTGFPPLPVESQTG*QAYRLS
Trigger: GGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTC...AACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAACGGTTGACTCCGTaGGGATCCGCGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PGLPESVVYACDLPCAQTKRLTP*GSAPAS
Trigger: GGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTT...AGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGAGTTGGGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACGAGTCTCAGACAGGCTaGCAGGCTTACAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: GVGRGSPGLPESVVYACDESQTG*QAYRLS
Trigger: GGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTC...GTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCCCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGCGGCCCTCCTCCACTTaGTCCTCAGTCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQRPSST*SSVFRF
Trigger: AAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCG...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCTGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTAAGAAAATAAAGTCGTaGTGGGCGGCTGGGGAACCT +
Preference number: 5 (lower is better)
Translates to: PVSLRQACRLTGFPPLPVKKIKS*WAAGEP
Trigger: AGGTTCCCCAGCCGCCCACAACGACTTTATTTTCTT...AACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp ATCTCTCCTCAGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTCCACTGGGCATGCCCTaGTTCTCCTCGCGCATTCCG +
Preference number: 5 (lower is better)
Translates to: ISPQCSKSKGQHPVQRCSPLGMP*FSSRIP
Trigger: CGGAATGCGCGAGGAGAACAAGGGCATGCCCAGTGG...AGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACTGAGGAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCCGGATAATCCACCGTaGGCCGTAAACTTAACGACA +
Preference number: 5 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATPDNPP*AVNLTT
Trigger: TGTCGTTAAGTTTACGGCCAACGGTGGATTATCCGG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGCGAGGGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATCCGGATAATCCACCGTaGGCCGTAAACTTAACGACA +
Preference number: 5 (lower is better)
Translates to: GEGLQGFQRVSFTHVTCHPDNPP*AVNLTT
Trigger: TGTCGTTAAGTTTACGGCCAACGGTGGATTATCCGG...ATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACCCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTCCGCTAGGGCCTAAGTaGTGGGTTCACCATAACTCC +
Preference number: 5 (lower is better)
Translates to: SVVRAKASILCKGALQRRPLGPK*WVHHNS
Trigger: GGAGTTATGGTGAACCCACAACTTAGGCCCTAGCGG...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CTCCACCACCTCATCCTGTGTAGTCTGCCTGCGGAACCCGCGGGAATCTCTCCTGTTTACGCATGTGACTaGCCATGCGCTCAAACTAAA +
Preference number: 5 (lower is better)
Translates to: LHHLILCSLPAEPAGISPVYACD*PCAQTK
Trigger: TTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAAC...AGGAGAGATTCCCGCGGGTTCCGCAGGCAGACTACACAGGATGAGGTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGGGACTTACTGAAGCCCACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTACGCATGTGACTaGCCATGCGCTCAAACTAAA +
Preference number: 5 (lower is better)
Translates to: GDLLKPTSALLHFVLSLQVYACD*PCAQTK
Trigger: TTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAAC...CTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGTGGGCTTCAGTAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCAAACTAAAGCCGCTAGGGCCTAAGTaGTGGGTTCACCATAACTCC +
Preference number: 5 (lower is better)
Translates to: GFQRVSFTHVTCHALKLKPLGPK*WVHHNS
Trigger: GGAGTTATGGTGAACCCACAACTTAGGCCCTAGCGG...CTTTAGTTTGAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp TGTGAGTCTCAGACAGGCTTGCAGGCTTACAGGCTTTCCGCCGCTCCCCGTTGGTTTGCAACAGTGCCATaGCTACATTTAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: CESQTGLQAYRLSAAPRWFATVP*LHLRAV
Trigger: TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAA...CCAACGGGGAGCGGCGGAAAGCCTGTAAGCCTGCAAGCCTGTCTGAGACTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp AGTGTAGTAAGAGCAAAGGCCAGCATCCTGTGCAAAGGTGCTCTGCAGCGTCGTGCGTTTGCACTGAGTTaGCAACAGTGCCATTGCTAC +
Preference number: 5 (lower is better)
Translates to: SVVRAKASILCKGALQRRAFALS*QQCHCY
Trigger: GTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGC...ACGACGCTGCAGAGCACCTTTGCACAGGATGCTGGCCTTTGCTCTTACTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCCACGCGGGCGCGCCTGGATaGCTTCTGGGAAAAAGCGCC +
Preference number: 5 (lower is better)
Translates to: PLLHLRAVVLPHILTESHAGAPG*LLGKSA
Trigger: GGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGC...GTGGCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGTCTCCAGGGCTTCCAGAGAGTGTCGTTTACGCATGTGACTTGCCATGCGCTCCAGTGCACCTTTAGTTaGTTCAGTGATAGTAGGACA +
Preference number: 5 (lower is better)
Translates to: GLQGFQRVSFTHVTCHALQCTFS*FSDSRT
Trigger: TGTCCTACTATCACTGAACAAACTAAAGGTGCACTG...GAGCGCATGGCAAGTCACATGCGTAAACGACACTCTCTGGAAGCCCTGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp GTGCCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCAAACGGTTGACTCCGTaGGGATCCGCGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VPLLHLRAVVLPHILTESKRLTP*GSAPAS
Trigger: GGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTT...GCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp CTGCCTTCTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTGTATCATTCATGATTTaGGAGGACAAGCTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LPSPTQRWSGRFIHRKIRVSFMI*EDKLVQ
Trigger: TTGCACCAGCTTGTCCTCCAAAATCATGAATGATAC...ACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAGAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCG +
Preference number: 5 (lower is better)
Translates to: GARSRTHENSNYMFCMYPRLPKR*TPLGSA
Trigger: CGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCG...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp CTAGGCGTTTGCACTGAGTTTGCAACAGTGCCATTGCTACATTTAAGAGCTGTACGGCCCTCCTCCACTTaGTCCTCAGTCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LGVCTEFATVPLLHLRAVRPSST*SSVFRF
Trigger: AAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCG...TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp ACCTCGGCCCTCCTCCACTTTGTCCTCAGTCTTCAGGTTTTCCTTTCTGCCGCTTATTTCTTTGCCTCATaGTCCTCATCTGGGAAACAA +
Preference number: 5 (lower is better)
Translates to: TSALLHFVLSLQVFLSAAYFFAS*SSSGKQ
Trigger: TTGTTTCCCAGATGAGGACAATGAGGCAAAGAAATA...AGCGGCAGAAAGGAAAACCTGAAGACTGAGGACAAAGTGGAGGAGGGCCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp CTCCCACTCAGCGCTGGAGTGGGAGATTCATCCATCGGAAGATTCGTAGCCACCCCTTTGGCAAGTTACTaGATATTTCTTTGCCTCATT +
Preference number: 5 (lower is better)
Translates to: LPLSAGVGDSSIGRFVATPLASY*IFLCLI
Trigger: AATGAGGCAAAGAAATATCAAGTAACTTGCCAAAGG...GGTGGCTACGAATCTTCCGATGGATGAATCTCCCACTCCAGCGCTGAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp TCACACACTCCTAAATATCCCTGGAAATCCGCTTCTCTGTGTTTCGCTTCATGGGCGTTTGCACTGAGTTaGCAACAGTGCCATTGCTAC +
Preference number: 5 (lower is better)
Translates to: SHTPKYPWKSASLCFASWAFALS*QQCHCY
Trigger: GTAGCAATGGCACTGTTGCAAACTCAGTGCAAACGC...CCATGAAGCGAAACACAGAGAAGCGGATTTCCAGGGATATTTAGGAGTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp TTTAGTTTGTTCAGTGATAGTAGGACATCCCACGAGCCATCATATATTTTCAAGTTCCGCCGCTCCCCGTaGGCAGCCTTCATCGAATTA +
Preference number: 5 (lower is better)
Translates to: FSLFSDSRTSHEPSYIFKFRRSP*AAFIEL
Trigger: TAATTCGATGAAGGCTGCCAACGGGGAGCGGCGGAA...CTTGAAAATATATGATGGCTCGTGGGATGTCCTACTATCACTGAACAAACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp CCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCCACAAGAAAATAAAGTCGTaGTGGGCGGCTGGGGAACCT +
Preference number: 5 (lower is better)
Translates to: PLLHLRAVVLPHILTESHKKIKS*WAAGEP
Trigger: AGGTTCCCCAGCCGCCCACAACGACTTTATTTTCTT...GTGGCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp ATCGGAAGATTCGTAGCCACCAGGTCCAGTCAAGGATTTCATATGCACTTTCCCTCCCTTAATATCAGGTaGTCATTAGGAAAGATTCCA +
Preference number: 5 (lower is better)
Translates to: IGRFVATRSSQGFHMHFPSLNIR*SLGKIP
Trigger: TGGAATCTTTCCTAATGACAACCTGATATTAAGGGA...GGGAAAGTGCATATGAAATCCTTGACTGGACCTGGTGGCTACGAATCTTCCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp CCATTGCTACATTTAAGAGCTGTAGTTCTTCCTCACATTTTAACTGAGAGCCACTTTGCAACAGTGCCATaGCTACATTTAAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PLLHLRAVVLPHILTESHFATVP*LHLRAV
Trigger: TACAGCTCTTAAATGTAGCAATGGCACTGTTGCAAA...GTGGCTCTCAGTTAAAATGTGAGGAAGAACTACAGCTCTTAAATGTAGCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS-3UTR CAA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTAGCAGTTTTTATGAATaGCTGGTATTGCTTATGAGC +
Preference number: 5 (lower is better)
Translates to: GARSRTHENSNYMFCMYPSSFYE*LVLLMS
Trigger: GCTCATAAGCAATACCAGCAATTCATAAAAACTGCT...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS-3UTR CAA 90 bp GGAGCTAGAAGCAGGACTCATGAAAATAGTAACTATATGTTTTGCATGTATCCTTTACTTGATATTTCTTaGCCTCATTGTCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: GARSRTHENSNYMFCMYPLLDIS*PHCPHL
Trigger: CAGATGAGGACAATGAGGCAAAGAAATATCAAGTAA...AGGATACATGCAAAACATATAGTTACTATTTTCATGAGTCCTGCTTCTAGCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS GCA 72 bp GACGCAGCCGAGCTCAAAGCCGCTCTGGCCGCAGGGTaGGGACGCGTCGCGGAGTCCTCACTGCCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: DAAELKAALAAG*GRVAESSLPRL
Trigger: GAGGCGGGGCAGTGAGGACTCCGCGACGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCTCGGCTGCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CCA 72 bp CGCCTAGCGCGGACGCAGCCGAGCTCAAAGCCGCTCTaGCCGCAGGGTGCGGACGCGTCGCGGAGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: RLARTQPSSKPL*PQGADASRSPH
Trigger: GTGAGGACTCCGCGACGCGTCCGCACCCTGCGGCCAGAGCGGCTTTGAGCTCGGCTGCGTCCGCGCTAGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CAA 90 bp GGCCCTGGGGCCCCAGCTACCTGGATCGCGCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCGCCGGCTTCCAGGAGCTGTCGCACC +
Preference number: 6 (lower is better)
Translates to: GPGAPATWIARLPKR*TPLGSAPASRSCRT
Trigger: GGTGCGACAGCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTAGCTGGGGCCCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS GCA 72 bp CCTGGGCTCAGCTTCATTACCCTCCCGTCGTCCTTCTaGGGCTTGGGGCCCCGTGCAGTGGCCGAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: PGLSFITLPSSF*GLGPRAVAERP
Trigger: CGGCCGCTCGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACGACGGGAGGGTAATGAAGCTGAGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 72 bp CGGCGCTGGCCAGACCCTCATCGCTGCCGCCCCCACTaGGCATGCCCTTGTTCTCCTCGCGCATTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RRWPDPHRCRPH*ACPCSPRAFRS
Trigger: GCTGCGGAATGCGCGAGGAGAACAAGGGCATGCCCAGTGGGGGCGGCAGCGATGAGGGTCTGGCCAGCGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CAA 72 bp GCCCCAGCTACCTGGATCGCGCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCGCCGGCTTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: APATWIARLPKR*TPLGSAPASRS
Trigger: GCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTAGCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS TCA 72 bp CCCCAGCTACCTGGATCGCGCGCCTCCCGAAACGGTTaGCTCCGTTGGGATCCGCGCCGGCTTCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PQLPGSRASRNG*LRWDPRRLPGA
Trigger: AGCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTAGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380142.5
CDS CCA 72 bp TGGCCGAGCGGCCGGTCGTTAGCTCCGGGCTTTTCCTaGCGCTCAAGAACCAGCGGGCGCGCCTGGATTGCT +
Preference number: 6 (lower is better)
Translates to: WPSGRSLAPGFS*RSRTSGRAWIA
Trigger: AGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAGCCCGGAGCTAACGACCGGCCGCTCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CAA 90 bp GCGCTGCCCATCATCATGACCTGGATCGCGCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCGCCGGCTTCCAGGAGCTGTCGCACC +
Preference number: 6 (lower is better)
Translates to: ALPIIMTWIARLPKR*TPLGSAPASRSCRT
Trigger: GGTGCGACAGCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTCATGATGATGGGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CCA 72 bp GCGCTCAAGAACCAGCGGGCGCGCCTGGATTGCTTCTaGGAAAAAGCGCCTAGCGCGGACGCAGCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: ALKNQRARLDCF*EKAPSADAAEL
Trigger: GAGCTCGGCTGCGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 72 bp TCAGCTTCATTACCCTCCCGTCGTCCTTCTGCGGCTTaGGGCCCCGTGCAGTGGCCGAGCGGCCGGTCGTTA +
Preference number: 6 (lower is better)
Translates to: SASLPSRRPSAA*GPVQWPSGRSL
Trigger: TAACGACCGGCCGCTCGGCCACTGCACGGGGCCCCAAGCCGCAGAAGGACGACGGGAGGGTAATGAAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS GCA 72 bp TTCCTGGCGCTCAAGAACCAGCGGGCGCGCCTGGATTaGTTCTGGGAAAAAGCGCCTAGCGCGGACGCAGCC +
Preference number: 6 (lower is better)
Translates to: FLALKNQRARLD*FWEKAPSADAA
Trigger: GGCTGCGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CCA 72 bp GGCTTTTCCTGGCGCTCAAGAACCAGCGGGCGCGCCTaGATTGCTTCTGGGAAAAAGCGCCTAGCGCGGACG +
Preference number: 6 (lower is better)
Translates to: GFSWRSRTSGRA*IASGKKRLART
Trigger: CGTCCGCGCTAGGCGCTTTTTCCCAGAAGCAATCCAGGCGCGCCCGCTGGTTCTTGAGCGCCAGGAAAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CAA 72 bp ATCATCATGACCTGGATCGCGCGCCTCCCGAAACGGTaGACTCCGTTGGGATCCGCGCCGGCTTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: IIMTWIARLPKR*TPLGSAPASRS
Trigger: GCTCCTGGAAGCCGGCGCGGATCCCAACGGAGTCAACCGTTTCGGGAGGCGCGCGATCCAGGTCATGATGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276925.7
CDS CAA 90 bp GCATTCCGCAGCCCCCAGACGCGCAGCGGCCCGGATAATCCACCGTaGGCCGTAAACTTAACGACACTCTTCCCTTCTTTCCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: AFRSPQTRSGPDNPP*AVNLTTLFPSFPRC
Trigger: GCAGCGTGGGAAAGAAGGGAAGAGTGTCGTTAAGTTTACGGCCAACGGTGGATTATCCGGGCCGCTGCGCGTCTGGGGGCTGCGGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5
CDS CAA 72 bp AGCCCCCAGACGCGCAGCGGCCCGGATAATCCACCGTaGGCCGTAAACTTAACGACACTCTTCCCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: SPQTRSGPDNPP*AVNLTTLFPSF
Trigger: GAAAGAAGGGAAGAGTGTCGTTAAGTTTACGGCCAACGGTGGATTATCCGGGCCGCTGCGCGTCTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276925.7
ENST00000380142.5