Pregenerated sensors for CDKN2A-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000224854Ensembl transcript IDs: ENST00000441769.3
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACCCCCAGGCTGGGGTTCCAGAGGGCTGTGAGGTTGCGAATGACTaGTGCCAAACCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: DPQAGVPEGCEVAND*CQTGRNSAVLCHSG Trigger: CCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCCAGCCTGGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS TCA 90 bp | CTCTGCCACAGTGGGATTGTTGCAGGCACGCGGCTCAGACTTCACTaGGGTTGGGAGATGCTCCTGTCCACGCTGCCTCATCCCGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LCHSGIVAGTRLRLH*GWEMLLSTLPHPVL Trigger: CAGCACGGGATGAGGCAGCGTGGACAGGAGCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 90 bp | GGATTGTTGCAGGCACGCGGCTCAGACTTCACTGAGGTTGGGAGATaGTCCTGTCCACGCTGCCTCATCCCGTGCTGGAGCACTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: GLLQARGSDFTEVGR*SCPRCLIPCWSTAP Trigger: AGGTGCAGTGCTCCAGCACGGGATGAGGCAGCGTGGACAGGAGCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 90 bp | CCCCAGGCTGGGGTTCCAGAGGGCTGTGAGGTTGCGAATGACTGCTaGCAAACCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: PQAGVPEGCEVANDC*QTGRNSAVLCHSGI Trigger: AATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCCAGCCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS TCA 90 bp | CGCGAGGTTTGGGATATTTTGCTCACCAGGCCTCAGCCAGGTAACTaGATCCAGCCAACCCTGGCCCATAGTCTCGGAATCCGACTCGGC | + |
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Preference number: 5 (lower is better) Translates to: REVWDILLTRPQPGN*IQPTLAHSLGIRLG Trigger: GCCGAGTCGGATTCCGAGACTATGGGCCAGGGTTGGCTGGATTCAGTTACCTGGCTGAGGCCTGGTGAGCAAAATATCCCAAACCTCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 90 bp | CCAAACCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGGATTGTTaGAGGCACGCGGCTCAGACTTCACTGAGGTTGGGAGATGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PNRKELCGSLPQWDC*RHAAQTSLRLGDAP Trigger: AGGAGCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 90 bp | CCACAGTGGGATTGTTGCAGGCACGCGGCTCAGACTTCACTGAGGTaGGGAGATGCTCCTGTCCACGCTGCCTCATCCCGTGCTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PQWDCCRHAAQTSLR*GDAPVHAASSRAGA Trigger: TGCTCCAGCACGGGATGAGGCAGCGTGGACAGGAGCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 90 bp | CGGCGTTCTGAGACCCCCAGGCTGGGGTTCCAGAGGGCTGTGAGGTaGCGAATGACTGCTGCCAAACCGGAAGGAACTCTGCGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RRSETPRLGFQRAVR*RMTAAKPEGTLRFS Trigger: AGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCCAGCCTGGGGGTCTCAGAACGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 72 bp | GAGACCCCCAGGCTGGGGTTCCAGAGGGCTGTGAGGTaGCGAATGACTGCTGCCAAACCGGAAGGAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: ETPRLGFQRAVR*RMTAAKPEGTL Trigger: CAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCCAGCCTGGGGGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 72 bp | GACTGCTGCCAAACCGGAAGGAACTCTGCGGTTCTCTaGCACAGTGGGATTGTTGCAGGCACGCGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DCCQTGRNSAVL*HSGIVAGTRLR Trigger: TCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 72 bp | GGGGTTCCAGAGGGCTGTGAGGTTGCGAATGACTGCTaGCAAACCGGAAGGAACTCTGCGGTTCTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GVPEGCEVANDC*QTGRNSAVLCH Trigger: GTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 72 bp | GCTGGGGTTCCAGAGGGCTGTGAGGTTGCGAATGACTaGTGCCAAACCGGAAGGAACTCTGCGGTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AGVPEGCEVAND*CQTGRNSAVLC Trigger: GCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGCAGTCATTCGCAACCTCACAGCCCTCTGGAACCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 90 bp | GCCAAACCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGGATTGTaGCAGGCACGCGGCTCAGACTTCACTGAGGTTGGGAGATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AKPEGTLRFSATVGL*QARGSDFTEVGRCS Trigger: GGAGCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 90 bp | GCTGCCAAACCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGGATaGTTGCAGGCACGCGGCTCAGACTTCACTGAGGTTGGGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: AAKPEGTLRFSATVG*LQARGSDFTEVGRC Trigger: GCATCTCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGGTTTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CAA 72 bp | CCGGAAGGAACTCTGCGGTTCTCTGCCACAGTGGGATaGTTGCAGGCACGCGGCTCAGACTTCACTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PEGTLRFSATVG*LQARGSDFTEV Trigger: AACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 72 bp | GACTTCACTGAGGTTGGGAGATGCTCCTGTCCACGCTaGCTCATCCCGTGCTGGAGCACTGCACCTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: DFTEVGRCSCPR*LIPCWSTAPLF Trigger: AAATAGAGGTGCAGTGCTCCAGCACGGGATGAGGCAGCGTGGACAGGAGCATCTCCCAACCTCAGTGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS GCA 72 bp | AAGGAACTCTGCGGTTCTCTGCCACAGTGGGATTGTTaGAGGCACGCGGCTCAGACTTCACTGAGGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KELCGSLPQWDC*RHAAQTSLRLG Trigger: TCCCAACCTCAGTGAAGTCTGAGCCGCGTGCCTGCAACAATCCCACTGTGGCAGAGAACCGCAGAGTTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS TCA 72 bp | TGGGATATTTTGCTCACCAGGCCTCAGCCAGGTAACTaGATCCAGCCAACCCTGGCCCATAGTCTCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: WDILLTRPQPGN*IQPTLAHSLGI Trigger: GATTCCGAGACTATGGGCCAGGGTTGGCTGGATTCAGTTACCTGGCTGAGGCCTGGTGAGCAAAATATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CCA 72 bp | ATTTATCCGGCTTCCCCTTCCAGATCACGCGAGGTTTaGGATATTTTGCTCACCAGGCCTCAGCCAGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: IYPASPSRSREV*DILLTRPQPGN Trigger: GTTACCTGGCTGAGGCCTGGTGAGCAAAATATCCCAAACCTCGCGTGATCTGGAAGGGGAAGCCGGATAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS TCA 72 bp | ACAACAATTTCATCGCATGGAAGACAGCATCGTTTCTaGCACTGTTGTTTCATGTATCTCTTAGAAAAACGC | + |
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Preference number: 6 (lower is better) Translates to: TTISSHGRQHRF*HCCFMYLLEKR Trigger: GCGTTTTTCTAAGAGATACATGAAACAACAGTGTCAGAAACGATGCTGTCTTCCATGCGATGAAATTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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| CDS CCA 72 bp | CATTTATTGAGCACCTATTACAACAATTTCATCGCATaGAAGACAGCATCGTTTCTGACACTGTTGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLLSTYYNNFIA*KTASFLTLLFH Trigger: ATGAAACAACAGTGTCAGAAACGATGCTGTCTTCCATGCGATGAAATTGTTGTAATAGGTGCTCAATAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441769.3 |
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