RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000008086

Ensembl transcript IDs: ENST00000379989.6, ENST00000379996.7, ENST00000463994.4, ENST00000623364.3, ENST00000623535.2, ENST00000623610.1, ENST00000624700.3, ENST00000624953.1, ENST00000635828.1, ENST00000637881.1, ENST00000673617.1, ENST00000674046.1

Found 1562 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTaGCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCAT +
Preference number: 1 (lower is better)
Translates to: TGGLQFLTWAHSGPP*LSVYCAARHPQVLH
Trigger: ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR TCA 90 bp CTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCAAGTGTGTaGGGACGGAAACCAGGCCTGCTGGAATTCTCACTGGCCTATCTG +
Preference number: 1 (lower is better)
Translates to: LCASNVPGHKQEPSV*GRKPGLLEFSLAYL
Trigger: CAGATAGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCCGTCCTCACACACTTGGCTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp CCAGGCCTGCTGGAATTCTCACTGGCCTATCTGACTTTCTTCCCCTaGAGGTTTGGAAAGAGATGCTGCATCTCGTCTGCTACCAAGGAT +
Preference number: 1 (lower is better)
Translates to: PGLLEFSLAYLTFFP*RFGKRCCISSATKD
Trigger: ATCCTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGAATTCCAGCAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CATGTTCTGACCAGCAGAGAACGTGCAGATTTACTGAGTCCCAGCTaGGCTCCAGCACCGAATCACATTGAGCCATTGCCCTTGCTGAAA +
Preference number: 1 (lower is better)
Translates to: HVLTSRERADLLSPS*APAPNHIEPLPLLK
Trigger: TTTCAGCAAGGGCAATGGCTCAATGTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTCAGAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTCCTGAACGATaGAAGATGGCTCAATCTCCTCTTCCTCGATCTCGGAAGAGACAT +
Preference number: 1 (lower is better)
Translates to: PSAHWTIPEPHAPER*KMAQSPLPRSRKRH
Trigger: ATGTCTCTTCCGAGATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CCA 90 bp GGAGCTGTTCGCAGTTCAAACACGAAGGACCACAGTGCTCAAGATTaGGACGGCCTGGCAGTCACATCAGTCAGTGCAAAATCTGCATTT +
Preference number: 1 (lower is better)
Translates to: GAVRSSNTKDHSAQD*DGLAVTSVSAKSAF
Trigger: AAATGCAGATTTTGCACTGACTGATGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp CTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTaGGGCCAATTCTCAGAGTACCTTTGCTGTAAATGTCATGGTATA +
Preference number: 1 (lower is better)
Translates to: LDLATWATTLALGPL*GQFSEYLCCKCHGI
Trigger: TATACCATGACATTTACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR GCA 90 bp CATTTGTGGCCGCGAGGAGCTCAACGGCCCCAACACATGCAATATTaGACACACCTTCATAAAGCTGAAAATATTGGCTCACCACTTGGC +
Preference number: 1 (lower is better)
Translates to: HLWPRGAQRPQHMQY*THLHKAENIGSPLG
Trigger: GCCAAGTGGTGAGCCAATATTTTCAGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTGGGGCCGTTGAGCTCCTCGCGGCCACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp GATGCTGCATCTCGTCTGCTACCAAGGATCATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAGCAAGGTTCATACTGTTACAGTCAC +
Preference number: 1 (lower is better)
Translates to: DAASRLLPRIMSRGY*WGLKVEQGSYCYSH
Trigger: GTGACTGTAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACATGATCCTTGGTAGCAGACGAGATGCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp GAACTAAAATGGAGCTGTTCGCAGTTCAAACACGAAGGACCACAGTaGTCAAGATTGGGACGGCCTGGCAGTCACATCAGTCAGTGCAAA +
Preference number: 1 (lower is better)
Translates to: ELKWSCSQFKHEGPQ*SRLGRPGSHISQCK
Trigger: TTTGCACTGACTGATGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCCATTTTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp ACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTaGTGTAAATGTCATGGTATAAGGGACATGCATTTAAGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: TLALGPLWGQFSEYL*CKCHGIRDMHLRAQ
Trigger: CTGAGCCCTTAAATGCATGTCCCTTATACCATGACATTTACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CCA 90 bp CTCACTGGACAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATaGCTCAATCTCCTCTTCCTCGATCTCGGAAGAGACATGGAAAGC +
Preference number: 1 (lower is better)
Translates to: LTGQFLSLMLLNDER*LNLLFLDLGRDMES
Trigger: GCTTTCCATGTCTCTTCCGAGATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTGTCCAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR GCA 90 bp AAAAGCAATGCTCTCCAGGAAACATGTTCTGACCAGCAGAGAACGTaGAGATTTACTGAGTCCCAGCTGAGCTCCAGCACCGAATCACAT +
Preference number: 1 (lower is better)
Translates to: KSNALQETCSDQQRT*RFTESQLSSSTESH
Trigger: ATGTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTCAGAACATGTTTCCTGGAGAGCATTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp CTCAATCTCCTCTTCCTCGATCTCGGAAGAGACATGGAAAGCACTTaGAAATTCACAGCCAATCATGACTGCTGGATTTGGCCACTTGGG +
Preference number: 1 (lower is better)
Translates to: LNLLFLDLGRDMEST*KFTANHDCWIWPLG
Trigger: CCCAAGTGGCCAAATCCAGCAGTCATGATTGGCTGTGAATTTCCAAGTGCTTTCCATGTCTCTTCCGAGATCGAGGAAGAGGAGATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CCA 90 bp CACACATATATCTCACACCCCATCAGCCAAGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATAGAGATGGTTTGCAAGATCTGCAGA +
Preference number: 1 (lower is better)
Translates to: HTYISHPISQESPGQ*TIFRSIEMVCKICR
Trigger: TCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCCCGGAGACTCTTGGCTGATGGGGTGTGAGATATATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp AAAATATGTAGTAAGGGCATCGGTCAACACGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCTGGCATTCCCAAGTTCAACAGAGAT +
Preference number: 1 (lower is better)
Translates to: KICSKGIGQHDFPIP*SARTHPGIPKFNRD
Trigger: ATCTCTGTTGAACTTGGGAATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCGTGTTGACCGATGCCCTTACTACATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp GAGTCTCCGGGACAGTGGACAATATTCAGGAGCATAGAGATGGTTTaGAAGATCTGCAGACAGGTACCTCTTATGATCTCACAACAAGGA +
Preference number: 1 (lower is better)
Translates to: ESPGQWTIFRSIEMV*KICRQVPLMISQQG
Trigger: TCCTTGTTGTGAGATCATAAGAGGTACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCCCGGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp TGTTCACTGGCAAATCTTTGGTCTACGCTCTACACTAATGCTAAGTaGAAGAGCACATTCTCTCTACAAAGACCCACGAGTAACGCCTCA +
Preference number: 1 (lower is better)
Translates to: CSLANLWSTLYTNAK*KSTFSLQRPTSNAS
Trigger: TGAGGCGTTACTCGTGGGTCTTTGTAGAGAGAATGTGCTCTTCCACTTAGCATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp AGGTTGTCTGCAAGCTTTGCTTTCCATTTTGGAAAACCTAAGCCGTaGTGGAGAACTTACTTACACATTCTCCGGGACGATAAGCATCTT +
Preference number: 1 (lower is better)
Translates to: RLSASFAFHFGKPKP*WRTYLHILRDDKHL
Trigger: AAGATGCTTATCGTCCCGGAGAATGTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCCAAAATGGAAAGCAAAGCTTGCAGACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp GCTTTTAAGCTGCATCCCCAGAGGACCTCCAGTGACTTGTTTCAATaGAGTGTTCTATTCTCAAATTGCATCAATTACCATCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: AFKLHPQRTSSDLFQ*SVLFSNCINYHLLG
Trigger: TCCCAGCAGATGGTAATTGATGCAATTTGAGAATAGAACACTTCATTGAAACAAGTCACTGGAGGTCCTCTGGGGATGCAGCTTAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp GGACAGTGGACAATATTCAGGAGCATAGAGATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATGATCTCACAACAAGGAATGTTCACT +
Preference number: 1 (lower is better)
Translates to: GQWTIFRSIEMVCKI*RQVPLMISQQGMFT
Trigger: AGTGAACATTCCTTGTTGTGAGATCATAAGAGGTACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 90 bp AAGTATTCTCCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTaGTCCCTACAGGAAGTAGCAGAGCACACTGTACACTCTAAGTGC +
Preference number: 1 (lower is better)
Translates to: KYSPSSFQSLPKKAL*SLQEVAEHTVHSKC
Trigger: GCACTTAGAGTGTACAGTGTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGGAGAATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CCA 90 bp CTGCAGACAGGTACCTCTTATGATCTCACAACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGCTCTACACTAATGCTAAGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: LQTGTSYDLTTRNVH*QIFGLRSTLMLSGR
Trigger: TCTTCCACTTAGCATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGTTGTGAGATCATAAGAGGTACCTGTCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp CAGTGTACCCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTaGATCTTAGAACCCACATCTCAATATCCCACTATCATGCAGGAG +
Preference number: 1 (lower is better)
Translates to: QCTLPHSKVHKSMSL*ILEPTSQYPTIMQE
Trigger: CTCCTGCATGATAGTGGGATATTGAGATGTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGGGTACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp TTGTCTGCAAGCTTTGCTTTCCATTTTGGAAAACCTAAGCCGTGCTaGAGAACTTACTTACACATTCTCCGGGACGATAAGCATCTTTTT +
Preference number: 1 (lower is better)
Translates to: LSASFAFHFGKPKPC*RTYLHILRDDKHLF
Trigger: AAAAAGATGCTTATCGTCCCGGAGAATGTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCCAAAATGGAAAGCAAAGCTTGCAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp CATTTGAATTCGAATGCATTCTTTCTTCCCAAGAAGGAACTAAAATaGAGCTGTTCGCAGTTCAAACACGAAGGACCACAGTGCTCAAGA +
Preference number: 1 (lower is better)
Translates to: HLNSNAFFLPKKELK*SCSQFKHEGPQCSR
Trigger: TCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCCATTTTAGTTCCTTCTTGGGAAGAAAGAATGCATTCGAATTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CCTGTTTCTATAAGTAAAGTTTTACGGGACCACAGCCACACTTACTaGTTTACATATTATCCATGCAGCCTCTGCAATACAAAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: PVSISKVLRDHSHTY*FTYYPCSLCNTKAE
Trigger: CTCTGCCTTTGTATTGCAGAGGCTGCATGGATAATATGTAAATCAGTAAGTGTGGCTGTGGTCCCGTAAAACTTTACTTATAGAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp GTTGGAAGAGTAACAAACAAGGCAACTTCTAATCTGCATACAACATaGAGACCGATTTTCAGATTCCAAAGGAGGATCGAAATAGGAACC +
Preference number: 1 (lower is better)
Translates to: VGRVTNKATSNLHTT*RPIFRFQRRIEIGT
Trigger: GGTTCCTATTTCGATCCTCCTTTGGAATCTGAAAATCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCTTGTTTGTTACTCTTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CAATGGAAACGAACAATAGGATTCCAAGGATTCAGGCATAGTGGTTaGAGACTCTTAAGAGAATGTGATGTTGAAGAAATCACACCTGCA +
Preference number: 1 (lower is better)
Translates to: QWKRTIGFQGFRHSG*RLLRECDVEEITPA
Trigger: TGCAGGTGTGATTTCTTCAACATCACATTCTCTTAAGAGTCTTCAACCACTATGCCTGAATCCTTGGAATCCTATTGTTCGTTTCCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp TATGGTTTCTTACTCATCGTTTCTGAGACAGAATTTTTCATCAGCTaGACCAGACCTCAAGATATTCTGTATCTCAGCTGGTCAAGAAGC +
Preference number: 1 (lower is better)
Translates to: YGFLLIVSETEFFIS*TRPQDILYLSWSRS
Trigger: GCTTCTTGACCAGCTGAGATACAGAATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAGAAACCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp GAAACAATACTGATTGTGACCACATTACCATACGTGGACGTGCAGTaGCTTTTAAGGGTATATGGGCTTTACAATGAACATATTCGGCTT +
Preference number: 1 (lower is better)
Translates to: ETILIVTTLPYVDVQ*LLRVYGLYNEHIRL
Trigger: AAGCCGAATATGTTCATTGTAAAGCCCATATACCCTTAAAAGTCACTGCACGTCCACGTATGGTAATGTGGTCACAATCAGTATTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CAGCAACACTTGTTACTGTCCATCTTTGACTATACCCATAATGTGTaGAGTTGCATCTCAACTGTGGTTTTGATTTGCATTTCCCTAGTG +
Preference number: 1 (lower is better)
Translates to: QQHLLLSIFDYTHNV*SCISTVVLICISLV
Trigger: CACTAGGGAAATGCAAATCAAAACCACAGTTGAGATGCAACTTCACACATTATGGGTATAGTCAAAGATGGACAGTAACAAGTGTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp TCTACAACCACAACATACTTTATAATACATGGCGTGACTAGAGACTaGCAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAG +
Preference number: 1 (lower is better)
Translates to: STTTTYFIIHGVTRD*QHSSELRIKVQLRK
Trigger: CTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAGTCACGCCATGTATTATAAAGTATGTTGTGGTTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CTTAGTGATGAACTGAAGGAGGCAAGGAAATATTTCACTATTTTCTaGCTTGGTTCAGTGTACCCTACCACATTCCAAAGTTCACAAAAG +
Preference number: 1 (lower is better)
Translates to: LSDELKEARKYFTIF*LGSVYPTTFQSSQK
Trigger: CTTTTGTGAACTTTGGAATGTGGTAGGGTACACTGAACCAAGTCAGAAAATAGTGAAATATTTCCTTGCCTCCTTCAGTTCATCACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp GATGAGGGACTTCTTTTTCTTGTATGGTTTCTTACTCATCGTTTCTaGGACAGAATTTTTCATCAGCTGAACCAGACCTCAAGATATTCT +
Preference number: 1 (lower is better)
Translates to: DEGLLFLVWFLTHRF*DRIFHQLNQTSRYS
Trigger: AGAATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAGAAACCATACAAGAAAAAGAAGTCCCTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 90 bp CAAACCACTGTGGGAAATGAAGATTCATGTAGTAACTGGCTCACATaGAGGCCTACCATTTGTATCGTACATTCAATTCACAAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: QTTVGNEDSCSNWLT*RPTICIVHSIHKEK
Trigger: TTTTTCTTTGTGAATTGAATGTACGATACAAATGGTAGGCCTTCATGTGAGCCAGTTACTACATGAATCTTCATTTCCCACAGTGGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 90 bp GAATTGCATGCTGGAAATGCAGATTGTAGTTCACTTACAGCTTATTaGATGAAAAGTCAGAACAGACAAAAGCTGAGAAGAGGATTAAAG +
Preference number: 1 (lower is better)
Translates to: ELHAGNADCSSLTAY*MKSQNRQKLRRGLK
Trigger: CTTTAATCCTCTTCTCAGCTTTTGTCTGTTCTGACTTTTCATCCAATAAGCTGTAAGTGAACTACAATCTGCATTTCCAGCATGCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACACTTGGCCCGGCCCATaGCCCAAGCCCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNTWPGP*PKPSPP
Trigger: GGGTGGGCTGGGCTTGGGGCATGGGCCGGGCCAAGT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCCAGAGCCAAGCTCTaGAGACTGGTGGGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLARAKL*RLVGLG
Trigger: TCCCAAGCCCACCAGTCTGCAGAGCTTGGCTCTGGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAACCAGCCCCTAGGTaGCGAGCCTCGAATGCCACA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKPAPR*RASNAT
Trigger: TGTGGCATTCGAGGCTCGTCACCTAGGGGCTGGTTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTACTTGGCCCGGCCCATaGCCCAAGCCCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASTWPGP*PKPSPP
Trigger: GGGTGGGCTGGGCTTGGGGCATGGGCCGGGCCAAGT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCGTCCAGGTGGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSSRWE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCCACCTGGACGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATGCCAATCATGACTGCTaGATTTGGCCACTTGGGCTA +
Preference number: 2 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHANHDC*IWPLGL
Trigger: TAGCCCAAGTGGCCAAATCCAGCAGTCATGATTGGC...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCTGGGCTTTTAAGCTaGATCCCCAGAGGACCTCCA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPGLLS*IPRGPP
Trigger: TGGAGGTCCTCTGGGGATGCAGCTTAAAAGCCCAGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCCCAAGAAAGCTTTGTaGTCCCTACAGGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHPKKAL*SLQEVA
Trigger: TGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGG...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAATACACGGAAAGGTaGGGTCAGTGCCCGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKYTER*GQCPER
Trigger: CCTCTCCGGGCACTGACCCCACCTTTCCGTGTATTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp CCCAACACATGCAATATTGCACACACCTTCATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGGCCCATGCCCCAAGCCCAGCCCACC +
Preference number: 2 (lower is better)
Translates to: PNTCNIAHTFIKLKI*AHHLARPMPQAQPT
Trigger: GGTGGGCTGGGCTTGGGGCATGGGCCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCCATTGCCCTTGCTaGAAGAGTTCAGTCACCACC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSHCPC*KSSVTT
Trigger: GGTGGTGACTGAACTCTTTCAGCAAGGGCAATGGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGGAAACCAGGCCTGCTaGAATTCTCACTGGCCTATC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLGNQAC*NSHWPI
Trigger: GATAGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCACCAGGTCCCAGGTaGACAGAAATAGACAGATCT +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPPGPR*TEIDRS
Trigger: AGATCTGTCTATTTCTGTTCACCTGGGACCTGGTGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLMSRGY*WGLKVE
Trigger: CTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGACCAGCAGAGAACGTaGAGATTTACTGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLDQQRT*RFTESQ
Trigger: CTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTTCCCCTGCAGGTTTaGAAAGAGATGCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLPLQV*KEMLHL
Trigger: GAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCTTTCCCTCCTGATTaGACATGTACTCGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSFPPD*TCTRLV
Trigger: CACCAACCGAGTACATGTTCAATCAGGAGGGAAAGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAACGGCCCCAACACATaGAATATTGCACACACCTTC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLNGPNT*NIAHTF
Trigger: GAAGGTGTGTGCAATATTGCATGTGTTGGGGCCGTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGAGTGTCTAGCGACGTaGAAAGGTGACAACACTCAA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLECLAT*KGDNTQ
Trigger: TTGAGTGTTGTCACCTTTGCACGTCGCTAGACACTC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCATCAATTACCATCTaGTGGGAAAGGGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLASITI*WERGWK
Trigger: CTTCCATCCCCTTTCCCAGCAGATGGTAATTGATGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGCAGACTGGTGGGCTTaGGATGGTGTAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASADWWA*DGVGQG
Trigger: ACCCTGCCCTACACCATCCCAAGCCCACCAGTCTGC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp TGGAGCTGTTCGCAGTTCAAACACGAAGGACCACAGTGCTCAAGATaGGGACGGCCTGGCAGTCACATCAGTCAGTGCAAAATCTGCATT +
Preference number: 2 (lower is better)
Translates to: WSCSQFKHEGPQCSR*GRPGSHISQCKICI
Trigger: AATGCAGATTTTGCACTGACTGATGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTGTTCTGCAAACATCTaGGATCCCAGTGTTAGCAAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLCSANI*DPSVSK
Trigger: CTTGCTAACACTGGGATCTCAGATGTTTGCAGAACA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCCACGGATGCCTTTaGGCAGTTGGTAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSHGCL*AVGKNH
Trigger: ATGATTTTTACCAACTGCTCAAAGGCATCCGTGGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCTTCCCCTGCAGGTTTaGAAAGAGATGCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: ASIYSPLCASNVPGHKQELPLQV*KEMLHL
Trigger: GAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCAAAGAGCTTCTAGCCTaGGCAACAAGGCGAGACCCC +
Preference number: 2 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFKELLA*ATRRDP
Trigger: GGGGTCTCGCCTTGTTGCCCAGGCTAGAAGCTCTTT...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATCATGACTGCTGGATTTaGCCACTTGGGCTACAACCC +
Preference number: 2 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDHDCWI*PLGLQP
Trigger: GGGTTGTAGCCCAAGTGGCCAAATCCAGCAGTCATG...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTACTGAGTCCCAGCTaGGCTCCAGCACCGAATCAC +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLLSPS*APAPNH
Trigger: GTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGTAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCGACGTGCAAAGGTaGCAACACTCAAGTATAAAA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSDVQR*QHSSIK
Trigger: TTTTATACTTGAGTGTTGTCACCTTTGCACGTCGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATACAGCCAATCATGACTaGTGGATTTGGCCACTTGGG +
Preference number: 2 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDTANHD*WIWPLG
Trigger: CCCAAGTGGCCAAATCCAGCAGTCATGATTGGCTGT...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTCACACAAGACCTGTaGGGAGTGGCGATCCCTAAG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLTQDL*GVAIPK
Trigger: CTTAGGGATCGCCACTCCCCACAGGTCTTGTGTGAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGACCACTGTTTGTTTaGGGGGCTGTCCTGTGCATG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGPLFV*GAVLCM
Trigger: CATGCACAGGACAGCCCCCCAAACAAACAGTGGTCC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGCAGACTGGTGGGCTTaGGATGGTGTAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRADWWA*DGVGQG
Trigger: ACCCTGCCCTACACCATCCCAAGCCCACCAGTCTGC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGCTCTGCAGACTGGTaGGCTTGGGATGGTGTAGGG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASSADW*AWDGVG
Trigger: CCCTACACCATCCCAAGCCCACCAGTCTGCAGAGCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCACAGTGCTCAAGATTaGGACGGCCTGGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSHSAQD*DGLAVT
Trigger: TGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAAGGGGATGGAAGGTaGCACATAAATTGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKGDGR*HINCCE
Trigger: CTCACAACAATTTATGTGCCACCTTCCATCCCCTTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTGTCCACTTGGGGCTTaGTTGCTAAGGCCCACTGAC +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSCPLGA*LLRPTD
Trigger: GTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGGACA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAAACCAGCCCCTAGGTaGCGAGCCTCGAATGCCACA +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHKPAPR*RASNAT
Trigger: TGTGGCATTCGAGGCTCGTCACCTAGGGGCTGGTTT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTCAGGCATAGTGGTTaGAGACTCTTAAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFRHSG*RLLREC
Trigger: ACATTCTCTTAAGAGTCTTCAACCACTATGCCTGAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCATCATCCCTCATTTaGATTCGAATGCATTCTTTC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPSSLI*IRMHSF
Trigger: GAAAGAATGCATTCGAATTCAAATGAGGGATGATGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCACAGCCACACTTACTaGTTTACATATTATCCATGC +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLHSHTY*FTYYPC
Trigger: GCATGGATAATATGTAAATCAGTAAGTGTGGCTGTG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGCGATCTTGGCTCACTaGAACCTCTGCCTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASAILAH*NLCLLG
Trigger: ACCCAAAAGGCAGAGGTTGCAGTGAGCCAAGATCGC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAGTCCTTTCTACCATaGATGGCAATCTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKSFLP*MAIFVM
Trigger: CATCACAAAGATTGCCATCCATGGTAGAAAGGACTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGGACCACTGTTTGTTTaGGGGGCTGTCCTGTGCATG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAGPLFV*GAVLCM
Trigger: CATGCACAGGACAGCCCCCCAAACAAACAGTGGTCC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGCTCTGCAGACTGGTaGGCTTGGGATGGTGTAGGG +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSSADW*AWDGVG
Trigger: CCCTACACCATCCCAAGCCCACCAGTCTGCAGAGCT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGTGAGATTCTGGCCCTaGGAATTAGCGACAGGACAC +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASVRFWP*ELATGH
Trigger: GTGTCCTGTCGCTAATTCCCAGGGCCAGAATCTCAC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp TGCTACCAAGGATCATGTCTAGAGGCTACTGCTGGGGCCTCAAAGTaGAGCAAGGTTCATACTGTTACAGTCACGTGTAGCCACAATTCA +
Preference number: 2 (lower is better)
Translates to: CYQGSCLEATAGASK*SKVHTVTVTCSHNS
Trigger: TGAATTGTGGCTACACGTGACTGTAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACATGATCCTTGGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp TGTAGAGTCAGCTCACTTGAGCCCCTCAGCATGAAGCACTCCCTTTaGGTCTTGGGCTCTAGAAAGAGGCTAAATTTTAGAGCAAGACCA +
Preference number: 2 (lower is better)
Translates to: CRVSSLEPLSMKHSL*VLGSRKRLNFRARP
Trigger: TGGTCTTGCTCTAAAATTTAGCCTCTTTCTAGAGCCCAAGACCAAAAGGGAGTGCTTCATGCTGAGGGGCTCAAGTGAGCTGACTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTCACTGGCCTATCTaGCTTTCTTCCCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASHWPI*LSSPAG
Trigger: ACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGAGAGGATCTTCTTGTaGGATTCTGGCCCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASERIFL*DSGPGN
Trigger: ATTCCCAGGGCCAGAATCTCACAAGAAGATCCTCTC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTTACTCATCGTTTCTaGGACAGAATTTTTCATCAG +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLTHRF*DRIFHQ
Trigger: CTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGTTGCTAAGGCCCACTaGCAAACAGCTTACAAGGAC +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSVAKAH*QTAYKD
Trigger: GTCCTTGTAAGCTGTTTGTCAGTGGGCCTTAGCAAC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTAGCTATAAAGTTATTTaGAAAGAGCTTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCSYKVI*KELLAW
Trigger: CCAGGCTAGAAGCTCTTTTCAAATAACTTTATAGCT...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTTGGAAAGAGATGCTaGATCTCGTCTGCTACCAAG +
Preference number: 2 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNFGKRC*ISSATK
Trigger: CTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTGATGGGGGTTGTGTaGGTAACAGGTGTGCATGAA +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLMGVV*VTGVHE
Trigger: TTCATGCACACCTGTTACGCACACAACCCCCATCAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGTGACGAGCCTCGAATaGCACAGCATGGCAACGGGA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISVTSLE*HSMATG
Trigger: TCCCGTTGCCATGCTGTGGCATTCGAGGCTCGTCAC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGACCAGCAGAGAACGTaGAGATTTACTGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASDQQRT*RFTESQ
Trigger: CTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCACTGCCGCAATTTTaGTGGCCCTACAAATCCAGC +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSSLPQF*WPYKSS
Trigger: GCTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCACGAAGGACCACAGTaGTCAAGATTGGGACGGCCT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIHEGPQ*SRLGRP
Trigger: AGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAAGACCTGTGGGGAGTaGCGATCCCTAAGGAACTCC +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHKTCGE*RSLRNS
Trigger: GGAGTTCCTTAGGGATCGCCACTCCCCACAGGTCTT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTCACACAAGACCTGTaGGGAGTGGCGATCCCTAAG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILTQDL*GVAIPK
Trigger: CTTAGGGATCGCCACTCCCCACAGGTCTTGTGTGAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCGAATGCCACAGCATaGCAACGGGACCGTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRSNATA*QRDRAV
Trigger: AACTGCACGGTCCCGTTGCCATGCTGTGGCATTCGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCTGTAGGTATTTTCTaGCTCAAATCTGGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSVGIF*LKSGKV
Trigger: TACTTTCCCAGATTTGAGCCAGAAAATACCTACAGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCTGGTGGGCTTGGGATaGTGTAGGGCAGGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLVGLG*CRAGFL
Trigger: GAGAAACCCTGCCCTACACCATCCCAAGCCCACCAG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCAAGCTCTGCAGACTaGTGGGCTTGGGATGGTGTA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRPSSAD*WAWDGV
Trigger: TACACCATCCCAAGCCCACCAGTCTGCAGAGCTTGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCACTTAGCACAAGATTaGCCTCTCTTCCCATCCTCC +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSHLAQD*PLFPSS
Trigger: GGAGGATGGGAAGAGAGGCCAATCTTGTGCTAAGTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTCGGCTTCAAATCCTaGCCCTGCCACTTCCAAACT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFGFKS*PCHFQT
Trigger: AGTTTGGAAGTGGCAGGGCCAGGATTTGAAGCCGAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp AGAGTCTCCGGGACAGTGGACAATATTCAGGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGTACCTCTTATGATCTCACAACAAGG +
Preference number: 2 (lower is better)
Translates to: RVSGTVDNIQEHRDG*QDLQTGTSYDLTTR
Trigger: CCTTGTTGTGAGATCATAAGAGGTACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCCCGGAGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp ATTCGGCTTCAAATCCTGGCCCTGCCACTTCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGTATGGAAATCTGTTTCCTCATTTAC +
Preference number: 2 (lower is better)
Translates to: IRLQILALPLPNWVT*GRLMSSMEICFLIY
Trigger: GTAAATGAGGAAACAGATTTCCATACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGGAAGTGGCAGGGCCAGGATTTGAAGCCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATGATGGTGCTGAGGTaGCTTCCCTCAAGGATGACC +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIMMVLR*LPSRMT
Trigger: GGTCATCCTTGAGGGAAGTCACCTCAGCACCATCAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGATGGTGCTGAGGTaGCTTCCCTCAAGGATGACC +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRMMVLR*LPSRMT
Trigger: GGTCATCCTTGAGGGAAGTCACCTCAGCACCATCAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGAGAAGTTATCTCTTTaGGGGGTGGGAGGGACCTTT +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAEKLSL*GVGGTF
Trigger: AAAGGTCCCTCCCACCCCTCAAAGAGATAACTTCTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGCGTGACTAGAGACTaGCAGCATAGCTCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGVTRD*QHSSEL
Trigger: AAGCTCAGAGCTATGCTGTCAGTCTCTAGTCACGCC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAGCCATTGCCCTTGCTaGAAGAGTTCAGTCACCACC +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISHCPC*KSSVTT
Trigger: GGTGGTGACTGAACTCTTTCAGCAAGGGCAATGGCT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTGTGCGGACACCTACTaGGCTCTGTGTAACTGGCAT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPICADTY*ALCNWH
Trigger: ATGCCAGTTACACAGAGCTCAGTAGGTGTCCGCACA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCCTATCCCTTGCAGTaGCAGGACACATCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRSYPLQ*QDTSWH
Trigger: ATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGACGGAAACCAGGCCTaGTGGAATTCTCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDGNQA*WNSHWP
Trigger: AGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCCGTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGCCAGAGCCAAGCTCTaGAGACTGGTGGGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFARAKL*RLVGLG
Trigger: TCCCAAGCCCACCAGTCTGCAGAGCTTGGCTCTGGC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTATCCATGCAGCCTCTaGAATACAAAGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASYPCSL*NTKAEL
Trigger: CAGCTCTGCCTTTGTATTGCAGAGGCTGCATGGATA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGACCCTTGGAATGGATaGTCACAGAACCCCATCTTT +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSDPWNG*SQNPIF
Trigger: AAAGATGGGGTTCTGTGAGCATCCATTCCAAGGGTC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTGCCAGGACACATCCTaGCATTCCCAAGTTCAACAG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRACQDTS*HSQVQQ
Trigger: CTGTTGAACTTGGGAATGCCAGGATGTGTCCTGGCA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTAGAGGCTACTGCTaGGGCCTCAAAGTTGAGCAA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASRGYC*GLKVEQ
Trigger: TTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCATCAAGCAGCTGCCTaGAAAAGCCAGAATTCAGAG +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSHQAAA*KSQNSE
Trigger: CTCTGAATTCTGGCTTTTCCAGGCAGCTGCTTGATG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAGATTGGGACGGCCTaGCAGTCACATCAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKIGTA*QSHQSV
Trigger: CACTGACTGATGTGACTGCCAGGCCGTCCCAATCTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTCACTGGCCTATCTaGCTTTCTTCCCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSHWPI*LSSPAG
Trigger: ACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGACTTCCCTCAAGGATaGCCCAGAGGCATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTDFPQG*PRGMGG
Trigger: TCCTCCCATGCCTCTGGGTCATCCTTGAGGGAAGTC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCATTTTGATCATAGCTaGCTTGATGCAGGGGCTGAC +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAHFDHS*LDAGAD
Trigger: GTCAGCCCCTGCATCAAGTCAGCTATGATCAAAATG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCCAGGCAAAACTGCTaGTGGTCCACCTCATTTGTA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASRQNC*WSTSFV
Trigger: TACAAATGAGGTGGACCATCAGCAGTTTTGCCTGGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAAGCGCATAGCACAGTaGGAAGTCTTTCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASKRIAQ*EVFPEK
Trigger: TTTCTCTGGAAAGACTTCTCACTGTGCTATGCGCTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGCACCGAATCACATTaGGCCATTGCCCTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSTESH*AIALAE
Trigger: TTCAGCAAGGGCAATGGCTCAATGTGATTCGGTGCT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTCTTCTGATAAGACCTaGAGCAGAGCACTAGGACAA +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASSSDKT*SRALGQ
Trigger: TTGTCCTAGTGCTCTGCTTCAGGTCTTATCAGAAGA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATACAAAGGCAGAGCTaGGTAATGTTGACAGGGAAC +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASIQRQS*VMLTGN
Trigger: GTTCCCTGTCAACATTACTCAGCTCTGCCTTTGTAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIDFPIP*SARTHP
Trigger: AGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCT +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRDFPIP*SARTHP
Trigger: AGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTTGGAAAGAGATGCTaGATCTCGTCTGCTACCAAG +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSFGKRC*ISSATK
Trigger: CTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCAGAGCCCAGAAGATTaGACCCCTAAAGTGACCCTT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIQSPED*TPKVTL
Trigger: AAGGGTCACTTTAGGGGTGCAATCTTCTGGGCTCTG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTGCCAGGACACATCCTaGCATTCCCAAGTTCAACAG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPICQDTS*HSQVQQ
Trigger: CTGTTGAACTTGGGAATGCCAGGATGTGTCCTGGCA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTCAAAGGGATACTCTTaGATTACAATAAACCCCACA +
Preference number: 2 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESKGYS*ITINPT
Trigger: TGTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGGAAACCAGGCCTGCTaGAATTCTCACTGGCCTATC +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISGNQAC*NSHWPI
Trigger: GATAGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGCAGTACTGTAGCCTaGACAGAACAAGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISCSTVA*TEQGQS
Trigger: GCTCTGGCCTTGTTCTGTCCAGGCTACAGTACTGCA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCTGCCGCAATTTTGCTaGCCCTACAAATCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLPQFC*PYKSSV
Trigger: CACGCTGGATTTGTAGGGCCAGCAAAATTGCGGCAG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAAGATTGGGACGGCCTaGCAGTCACATCAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISKIGTA*QSHQSV
Trigger: CACTGACTGATGTGACTGCCAGGCCGTCCCAATCTT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTCGGCTTCAAATCCTaGCCCTGCCACTTCCAAACT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFGFKS*PCHFQT
Trigger: AGTTTGGAAGTGGCAGGGCCAGGATTTGAAGCCGAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTGTTGCTTCCCCTGTaGTCCCAAGAGTACTTCCAT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILLLPL*SQEYFH
Trigger: ATGGAAGTACTCTTGGGACCACAGGGGAAGCAACAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGGGGCCTCAAAGTTaGGCAAGGTTCATACTGTTA +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLGPQS*ARFILL
Trigger: TAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGACAGGTACCTCTTATaGTCTCACAACAAGGAATGT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASDRYLL*SHNKEC
Trigger: ACATTCCTTGTTGTGAGATCATAAGAGGTACCTGTC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGAAAGAGATCAGATaGGGGGAAGATAGGTCCTGT +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLKEIR*GEDRSC
Trigger: ACAGGACCTATCTTCCCCTCATCTGATCTCTTTCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTGAAAGAGATCAGATaGGGGGAAGATAGGTCCTGT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILKEIR*GEDRSC
Trigger: ACAGGACCTATCTTCCCCTCATCTGATCTCTTTCAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTGGGAGGATAACACTTaGTGGCCAAAGGGTTTGATG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIWEDNT*WPKGLM
Trigger: CATCAAACCCTTTGGCCATCAAGTGTTATCCTCCCA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCTACCCAAACAGTACTaGACTGGTGAAAGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSLPKQY*TGERSK
Trigger: CTTACTTCTTTCACCAGTTCAGTACTGTTTGGGTAG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCCAGGCAAAACTGCTaGTGGTCCACCTCATTTGTA +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSRQNC*WSTSFV
Trigger: TACAAATGAGGTGGACCATCAGCAGTTTTGCCTGGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTGTTCTGCAAACATCTaGGATCCCAGTGTTAGCAAG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRACSANI*DPSVSK
Trigger: CTTGCTAACACTGGGATCTCAGATGTTTGCAGAACA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGCGACGTGCAAAGGTaGCAACACTCAAGTATAAAA +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSSDVQR*QHSSIK
Trigger: TTTTATACTTGAGTGTTGTCACCTTTGCACGTCGCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCCAGAGGACCTCCAGTaGCTTGTTTCAATGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIPEDLQ*LVSMKC
Trigger: ACACTTCATTGAAACAAGTCACTGGAGGTCCTCTGG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCAACACATGCAATATTaGACACACCTTCATAAAGCT +
Preference number: 2 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNQHMQY*THLHKA
Trigger: AGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGACTTTCTTCCCCTaGAGGTTTGGAAAGAGATGC +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLTFFP*RFGKRC
Trigger: GCATCTCTTTCCAAACCTGCAGGGGAAGAAAGTCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGACGGAAACCAGGCCTaGTGGAATTCTCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFDGNQA*WNSHWP
Trigger: AGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCCGTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAAAATCATGCCAATCTaGCAGGCTGTTGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAKIMPI*QAVACF
Trigger: GAAGCAAGCAACAGCCTGGCAGATTGGCATGATTTT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGGCAACTTCTAATCTaGATACAACATGGAGACCGA +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSRQLLI*IQHGDR
Trigger: TCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAAGACCTGTGGGGAGTaGCGATCCCTAAGGAACTCC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFKTCGE*RSLRNS
Trigger: GGAGTTCCTTAGGGATCGCCACTCCCCACAGGTCTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATA +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIESPGQ*TIFRSI
Trigger: TATGCTCCTGAATATTGTCCACTGTCCCGGAGACTC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCATCAAGCAGCTGCCTaGAAAAGCCAGAATTCAGAG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIHQAAA*KSQNSE
Trigger: CTCTGAATTCTGGCTTTTCCAGGCAGCTGCTTGATG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTCGAATGCCACAGCATaGCAACGGGACCGTGCAGTT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSNATA*QRDRAV
Trigger: AACTGCACGGTCCCGTTGCCATGCTGTGGCATTCGA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCACTATTTTCTGACTTaGTTCAGTGTACCCTACCAC +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSHYFLT*FSVPYH
Trigger: GTGGTAGGGTACACTGAACCAAGTCAGAAAATAGTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGTGAGCCACCACACCTaGCCTGATCCTGGGCTTTTA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFVSHHT*PDPGLL
Trigger: TAAAAGCCCAGGATCAGGCCAGGTGTGGTGGCTCAC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp GTGTCTCTAGAGAAAACAGGTTGTCTGCAAGCTTTGCTTTCCATTTaGGAAAACCTAAGCCGTGCTGGAGAACTTACTTACACATTCTCC +
Preference number: 2 (lower is better)
Translates to: VSLEKTGCLQALLSI*ENLSRAGELTYTFS
Trigger: GGAGAATGTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCCAAAATGGAAAGCAAAGCTTGCAGACAACCTGTTTTCTCTAGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp GGAAAGTATTCTCCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTaGTGCTCCCTACAGGAAGTAGCAGAGCACACTGTACACTCTAAG +
Preference number: 2 (lower is better)
Translates to: GKYSPSSFQSLPKKA*CSLQEVAEHTVHSK
Trigger: CTTAGAGTGTACAGTGTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGGAGAATACTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCTGGGGCCTCAAAGTTaGGCAAGGTTCATACTGTTA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLGPQS*ARFILL
Trigger: TAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCGTAACAGGTGTGCATaGAAATCTTGTCATAAGTGG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRARNRCA*KSCHKW
Trigger: CCACTTATGACAAGATTTTCATGCACACCTGTTACG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGGGAGGATAACACTTaGTGGCCAAAGGGTTTGATG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISWEDNT*WPKGLM
Trigger: CATCAAACCCTTTGGCCATCAAGTGTTATCCTCCCA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAGCGCATAGCACAGTaGGAAGTCTTTCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKRIAQ*EVFPEK
Trigger: TTTCTCTGGAAAGACTTCTCACTGTGCTATGCGCTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGCCACGGATGCCTTTaGGCAGTTGGTAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSHGCL*AVGKNH
Trigger: ATGATTTTTACCAACTGCTCAAAGGCATCCGTGGCT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCTCAAACTACCACGTaGGTGTCTAGCGACGTGCAA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPQTTT*VSSDVQ
Trigger: TTGCACGTCGCTAGACACTCACGTGGTAGTTTGAGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTCCTATCCCTTGCAGTaGCAGGACACATCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSYPLQ*QDTSWH
Trigger: ATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGCTGCATCTCGTCTaGTACCAAGGATCATGTCTA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRMLHLV*YQGSCL
Trigger: TAGACATGATCCTTGGTAGCAGACGAGATGCAGCAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGCATAGAGATGGTTTaGAAGATCTGCAGACAGGTA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASIEMV*KICRQV
Trigger: TACCTGTCTGCAGATCTTGCAAACCATCTCTATGCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAAAATCATGCCAATCTaGCAGGCTGTTGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRKIMPI*QAVACF
Trigger: GAAGCAAGCAACAGCCTGGCAGATTGGCATGATTTT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGCTTACAAGGACTGTTaGTTCCCCTGTGGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFAYKDC*FPCGPK
Trigger: CTTGGGACCACAGGGGAAGCAACAGTCCTTGTAAGC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGC +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRATRNVH*QIFGLR
Trigger: GCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISESPGQ*TIFRSI
Trigger: TATGCTCCTGAATATTGTCCACTGTCCCGGAGACTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTGCAGTACTGTAGCCTaGACAGAACAAGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFCSTVA*TEQGQS
Trigger: GCTCTGGCCTTGTTCTGTCCAGGCTACAGTACTGCA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGCAGGCCCAAGACAATaGAAACGAACAATAGGATTC +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRAGPRQ*KRTIGF
Trigger: GAATCCTATTGTTCGTTTCCATTGTCTTGGGCCTGC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGCTGGGATTTCACATTaGAAACTGCTCAATACTTCA +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSAGISH*KLLNTS
Trigger: TGAAGTATTGAGCAGTTTCCAATGTGAAATCCCAGC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp CAAGTTTGGTTTCTGGTTATTTTTGTAAGCCAGGCTTTTAAGTCTTaGAGAGGATCTTCTTGTGAGATTCTGGCCCTGGGAATTAGCGAC +
Preference number: 2 (lower is better)
Translates to: QVWFLVIFVSQAFKS*RGSSCEILALGISD
Trigger: GTCGCTAATTCCCAGGGCCAGAATCTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCTGGCTTACAAAAATAACCAGAAACCAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTATTCTAGCCCTTCTTTaGAGAACCGTCATGAATAGA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAILALL*RTVMNR
Trigger: TCTATTCATGACGGTTCTTCAAAGAAGGGCTAGAAT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAAGGTAGAAAAACAGTaGAGCAGAGTTTCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSKVEKQ*SRVSFP
Trigger: TGGAAAAGAAACTCTGCTTCACTGTTTTTCTACCTT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTCAGGCATAGTGGTTaGAGACTCTTAAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAFRHSG*RLLREC
Trigger: ACATTCTCTTAAGAGTCTTCAACCACTATGCCTGAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGGCTTTTAAGTCTTTaGGAGGATCTTCTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRARLLSL*EDLLVR
Trigger: TCTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGAATTTTTCATCAGCTaGACCAGACCTCAAGATATT +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSEFFIS*TRPQDI
Trigger: AATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTTACTCATCGTTTCTaGGACAGAATTTTTCATCAG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLTHRF*DRIFHQ
Trigger: CTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCCTAACGCTGATGAATaGACAAACCACTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISPNADE*TNHCGK
Trigger: TTTCCCACAGTGGTTTGTTCATTCATCAGCGTTAGG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTTCTGATAAGACCTaGAGCAGAGCACTAGGACAA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSSDKT*SRALGQ
Trigger: TTGTCCTAGTGCTCTGCTTCAGGTCTTATCAGAAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAG +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTMSRGY*WGLKVE
Trigger: CTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIMVCKI*RQVPLM
Trigger: CATAAGAGGTACCTGTCTGCAGATCTTGCAAACCAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAGCATAGAGATGGTTTaGAAGATCTGCAGACAGGTA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRSIEMV*KICRQV
Trigger: TACCTGTCTGCAGATCTTGCAAACCATCTCTATGCT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCTAGAGGCTACTGCTaGGGCCTCAAAGTTGAGCAA +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSRGYC*GLKVEQ
Trigger: TTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTACTTGGGAGTAACTTaGGAGCTGAAAGAGATCAGA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRYLGVT*ELKEIR
Trigger: TCTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTACTTGGGAGTAACTTaGGAGCTGAAAGAGATCAGA +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIYLGVT*ELKEIR
Trigger: TCTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAAGTCCTTTCTACCATaGATGGCAATCTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAKSFLP*MAIFVM
Trigger: CATCACAAAGATTGCCATCCATGGTAGAAAGGACTT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGAGGAAAAACGAGGATaGCAGAGAAATAAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAEEKRG*QRNKGR
Trigger: TCTACCTTTATTTCTCTGCCATCCTCGTTTTTCCTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAATCTGCATACAACATaGAGACCGATTTTCAGATTC +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASNLHTT*RPIFRF
Trigger: GAATCTGAAAATCGGTCTCCATGTTGTATGCAGATT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATAAAGCAAAACACTTaGGCATTGTGCCTGGCCATA +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIIKQNT*ALCLAI
Trigger: TATGGCCAGGCACAATGCCCAAGTGTTTTGCTTTAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATGAGATGTAGGAGATaGAGCCAAGACTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFMRCRR*SQDSTQ
Trigger: CTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTTCGGGTACTCTGTGTaGGAGGAGGTTACTTGGACA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFFGYSV*EEVTWT
Trigger: TGTCCAAGTAACCTCCTCCCACACAGAGTACCCGAA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp TTCCACTTTCTCCACATCCTCAGCAACACTTGTTACTGTCCATCTTaGACTATACCCATAATGTGTGAAGTTGCATCTCAACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: FHFLHILSNTCYCPS*TIPIMCEVASQLWF
Trigger: AAACCACAGTTGAGATGCAACTTCACACATTATGGGTATAGTCAAAGATGGACAGTAACAAGTGTTGCTGAGGATGTGGAGAAAGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCATTTTGATCATAGCTaGCTTGATGCAGGGGCTGAC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFHFDHS*LDAGAD
Trigger: GTCAGCCCCTGCATCAAGTCAGCTATGATCAAAATG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATTCTAGCCCTTCTTTaGAGAACCGTCATGAATAGA +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIILALL*RTVMNR
Trigger: TCTATTCATGACGGTTCTTCAAAGAAGGGCTAGAAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGGACATGGATGTCATaGATTCCCCTTCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRTWMS*IPLPKE
Trigger: TTCTTTAGGAAGGGGAATTCATGACATCCATGTCCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTCTTAGTGATGAACTaGAGGAGGCAAGGAAATATT +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAFLVMN*RRQGNI
Trigger: AATATTTCCTTGCCTCCTTCAGTTCATCACTAAGAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAACTCTACAGAGTTTaGACCGGAGCTTTTGACAAT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKLYRV*TGAFDN
Trigger: ATTGTCAAAAGCTCCGGTTCAAACTCTGTAGAGTTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATTTCTGTCTCAAACTaGTTACAACCTCAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISISVSN*LQPQRP
Trigger: GGGCCTTTGAGGTTGTAATCAGTTTGAGACAGAAAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTGACTTTCTTCCCCTaGAGGTTTGGAAAGAGATGC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLTFFP*RFGKRC
Trigger: GCATCTCTTTCCAAACCTGCAGGGGAAGAAAGTCAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISMVCKI*RQVPLM
Trigger: CATAAGAGGTACCTGTCTGCAGATCTTGCAAACCAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTATCTATCTGGAATTaGTCCAGGAGCCTTTTAAAT +
Preference number: 2 (lower is better)
Translates to: IGACESSNFALRDCFGYSLSIWN*SRSLLN
Trigger: ATTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGGCAACTTCTAATCTaGATACAACATGGAGACCGA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRQLLI*IQHGDR
Trigger: TCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTTACATATTATCCATaGAGCCTCTGCAATACAAAG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFTYYP*SLCNTK
Trigger: CTTTGTATTGCAGAGGCTGCATGGATAATATGTAAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGTTCTATTCTCAAATTaGATCAATTACCATCTGCTG +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASVLFSN*INYHLL
Trigger: CAGCAGATGGTAATTGATGCAATTTGAGAATAGAAC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTAAAGGGGAGAAACTaGCAAGAATTTCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVKGRN*QEFLLP
Trigger: AGGAAGAAGAAATTCTTGCCAGTTTCTCCCCTTTAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCACTGGCAAATCTTTaGTCTACGCTCTACACTAAT +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRSLANL*STLYTN
Trigger: ATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTGTAGGTATTTTCTaGCTCAAATCTGGGAAAGTA +
Preference number: 2 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASVGIF*LKSGKV
Trigger: TACTTTCCCAGATTTGAGCCAGAAAATACCTACAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTACCTCGAAAACACTaGTTGAAAACATTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLPRKH*LKTFVD
Trigger: ATCTACAAATGTTTTCAACCAGTGTTTTCGAGGTAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAGGAAAAACGAGGATaGCAGAGAAATAAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVREEKRG*QRNKGR
Trigger: TCTACCTTTATTTCTCTGCCATCCTCGTTTTTCCTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTTCTTGTGAGATTCTaGCCCTGGGAATTAGCGACA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLLVRF*PWELAT
Trigger: TGTCGCTAATTCCCAGGGCCAGAATCTCACAAGAAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAAGGTAGAAAAACAGTaGAGCAGAGTTTCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LETDSIALSLELKYNCVRKVEKQ*SRVSFP
Trigger: TGGAAAAGAAACTCTGCTTCACTGTTTTTCTACCTT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTCTTAGTGATGAACTaGAGGAGGCAAGGAAATATT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFLVMN*RRQGNI
Trigger: AATATTTCCTTGCCTCCTTCAGTTCATCACTAAGAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGTAACTGGCTCACATaGAGGCCTACCATTTGTATC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSNWLT*RPTICI
Trigger: GATACAAATGGTAGGCCTTCATGTGAGCCAGTTACT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAACCAAAGGAAGTCCTaGGGAATTCTTAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFNQRKS*GILSSL
Trigger: CAGACTGCTAAGAATTCCTCAGGACTTCCTTTGGTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCAACACATGCAATATTaGACACACCTTCATAAAGCT +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIQHMQY*THLHKA
Trigger: AGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATGCTGCATCTCGTCTaGTACCAAGGATCATGTCTA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFMLHLV*YQGSCL
Trigger: TAGACATGATCCTTGGTAGCAGACGAGATGCAGCAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTATCATCAAGCAGCTaGCTGGAAAAGCCAGAATTC +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVSSSS*LEKPEF
Trigger: GAATTCTGGCTTTTCCAGGCAGCTGCTTGATGATAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGCAGGCCCAAGACAATaGAAACGAACAATAGGATTC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFAGPRQ*KRTIGF
Trigger: GAATCCTATTGTTCGTTTCCATTGTCTTGGGCCTGC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGAGTACTTCCATGCTaGGTCATTCTTAAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFRVLPC*VILKPN
Trigger: GTTGGGCTTAAGAATGACCCAGCATGGAAGTACTCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACTACCCAAACAGTACTaGACTGGTGAAAGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLPKQY*TGERSK
Trigger: CTTACTTCTTTCACCAGTTCAGTACTGTTTGGGTAG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGGACATGGATGTCATaGATTCCCCTTCCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFRTWMS*IPLPKE
Trigger: TTCTTTAGGAAGGGGAATTCATGACATCCATGTCCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTATTTCACTATTTTCTaGCTTGGTTCAGTGTACCCT +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISYFTIF*LGSVYP
Trigger: AGGGTACACTGAACCAAGTCAGAAAATAGTGAAATA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATTTCTGTCTCAAACTaGTTACAACCTCAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFISVSN*LQPQRP
Trigger: GGGCCTTTGAGGTTGTAATCAGTTTGAGACAGAAAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFTRNVH*QIFGLR
Trigger: GCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTTCTGGCTCAAATCTaGGAAAGTACAAAAAGTACG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFLAQI*ESTKST
Trigger: CGTACTTTTTGTACTTTCCCAGATTTGAGCCAGAAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGATGTCACATCATTCTaGCTTATCCCTATTTTTAAG +
Preference number: 2 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIDVTSF*LIPIFK
Trigger: CTTAAAAATAGGGATAAGCCAGAATGATGTGACATC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAAACTCTACAGAGTTTaGACCGGAGCTTTTGACAAT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFKLYRV*TGAFDN
Trigger: ATTGTCAAAAGCTCCGGTTCAAACTCTGTAGAGTTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTATCTATCTGGAATTaGTCCAGGAGCCTTTTAAAT +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLSIWN*SRSLLN
Trigger: ATTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGGAAGAAATTGTAACTaGTTACAAGTTTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISGRNCN*LQVWFL
Trigger: CAGAAACCAAACTTGTAAGCAGTTACAATTTCTTCC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCACTGGCAAATCTTTaGTCTACGCTCTACACTAAT +
Preference number: 2 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSLANL*STLYTN
Trigger: ATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGGAACATGCTAAACTaGCTAACTCTACAACCACAA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFRNMLN*LTLQPQ
Trigger: TTGTGGTTGTAGAGTTAGCCAGTTTAGCATGTTCCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTACCTGAATTCAAAATaGCACAAAGCAATTCTTGGA +
Preference number: 2 (lower is better)
Translates to: DETEGLKRVSKLWPVSISYLNSK*HKAILG
Trigger: TCCAAGAATTGCTTTGTGCCATTTTGAATTCAGGTA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTATTTCACTATTTTCTaGCTTGGTTCAGTGTACCCT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFYFTIF*LGSVYP
Trigger: AGGGTACACTGAACCAAGTCAGAAAATAGTGAAATA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCACCCTTTCCTTCACTTaGCTAAGTTGTCTTTATTTC +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFTLSFT*LSCLYF
Trigger: GAAATAAAGACAACTTAGTCAAGTGAAGGAAAGGGT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTCAAAGGGATACTCTTaGATTACAATAAACCCCACA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSKGYS*ITINPT
Trigger: TGTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAAGAAGGAACTAAAATaGAGCTGTTCGCAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFKKELK*SCSQFK
Trigger: TTTGAACTGCGAACAGCTCCATTTTAGTTCCTTCTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 90 bp TTAAATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTaGACCACATGTAACTATCAAGCAATTACAATAAGCTGCATTCAG +
Preference number: 2 (lower is better)
Translates to: LNWYNTMRLLVIFIA*TTCNYQAITISCIQ
Trigger: CTGAATGCAGCTTATTGTAATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTACCTCGAAAACACTaGTTGAAAACATTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLPRKH*LKTFVD
Trigger: ATCTACAAATGTTTTCAACCAGTGTTTTCGAGGTAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp CAACACTCCCCAACCCATCGGCCACCCCAAGCCCTCTaGAACCACGAATCGACTGTCTCTGTAGATTGGCCT +
Preference number: 3 (lower is better)
Translates to: QHSPTHRPPQAL*NHESTVSVDWP
Trigger: AGGCCAATCTACAGAGACAGTCGATTCGTGGTTGCAGAGGGCTTGGGGTGGCCGATGGGTTGGGGAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCGGGGTTTCTCTATATaGGCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRGFSI*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAATATAGAGAAACCCCG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp CTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTaGCTGTCTGTCTACTGTGCAGCTAGACATCCCCAG +
Preference number: 3 (lower is better)
Translates to: LQFLTWAHSGPP*LSVYCAARHPQ
Trigger: CTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR TCA 72 bp ACCAGCAGAGAACGTGCAGATTTACTGAGTCCCAGCTaGGCTCCAGCACCGAATCACATTGAGCCATTGCCC +
Preference number: 3 (lower is better)
Translates to: TSRERADLLSPS*APAPNHIEPLP
Trigger: GGGCAATGGCTCAATGTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp CCCCTGCAGGTTTGGAAAGAGATGCTGCATCTCGTCTaGTACCAAGGATCATGTCTAGAGGCTACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: PLQVWKEMLHLV*YQGSCLEATAG
Trigger: CCCAGCAGTAGCCTCTAGACATGATCCTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAACCTGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp GCTCTCCAGGAAACATGTTCTGACCAGCAGAGAACGTaGAGATTTACTGAGTCCCAGCTGAGCTCCAGCACC +
Preference number: 3 (lower is better)
Translates to: ALQETCSDQQRT*RFTESQLSSST
Trigger: GGTGCTGGAGCTCAGCTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTCAGAACATGTTTCCTGGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp TGGAGCTGTTCGCAGTTCAAACACGAAGGACCACAGTaGTCAAGATTGGGACGGCCTGGCAGTCACATCAGT +
Preference number: 3 (lower is better)
Translates to: WSCSQFKHEGPQ*SRLGRPGSHIS
Trigger: ACTGATGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp GCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTaGGGCCAATTCTCAGAGTACCTTTGCTGTAAATGT +
Preference number: 3 (lower is better)
Translates to: ATWATTLALGPL*GQFSEYLCCKC
Trigger: ACATTTACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGATGGTCCACCTCATTaGTATCATCAAGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLDGPPH*YHQAAA
Trigger: GGCAGCTGCTTGATGATACAAATGAGGTGGACCATC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTCACTGCCGCAATTTaGCTGGCCCTACAAATCCAG +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFTAAI*LALQIQ
Trigger: CTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp ACTGAGTCCCAGCTGAGCTCCAGCACCGAATCACATTaGGCCATTGCCCTTGCTGAAAGAGTTCAGTCACCA +
Preference number: 3 (lower is better)
Translates to: TESQLSSSTESH*AIALAERVQSP
Trigger: TGGTGACTGAACTCTTTCAGCAAGGGCAATGGCTCAATGTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp AGTAAGGGCATCGGTCAACACGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCTGGCATTCCCAAGTTC +
Preference number: 3 (lower is better)
Translates to: SKGIGQHDFPIP*SARTHPGIPKF
Trigger: GAACTTGGGAATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCGTGTTGACCGATGCCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp CAATGGCACACTCTATCTATTCTCACACAAGACCTGTaGGGAGTGGCGATCCCTAAGGAACTCCTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: QWHTLSILTQDL*GVAIPKELLWL
Trigger: GAGCCACAGGAGTTCCTTAGGGATCGCCACTCCCCACAGGTCTTGTGTGAGAATAGATAGAGTGTGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp CGCAGTTCAAACACGAAGGACCACAGTGCTCAAGATTaGGACGGCCTGGCAGTCACATCAGTCAGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: RSSNTKDHSAQD*DGLAVTSVSAK
Trigger: TTTTGCACTGACTGATGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTGTTTGAACTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTGCCAGGCTGTTGCTaGCTTCTAAATATAAGCCTC +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLPGCC*LLNISL
Trigger: GAGGCTTATATTTAGAAGCAAGCAACAGCCTGGCAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTCTTCCCAAGAAAGCTTaGTGCTCCCTACAGGAAGTA +
Preference number: 3 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTLPKKA*CSLQEV
Trigger: TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAG...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTCGAGAGCTTAACCTaGTGGGAAATGAAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFESLT*WEMKGF
Trigger: AAAGCCCTTCATTTCCCACAAGGTTAAGCTCTCGAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp CTTTCGGGAGACACAGCTGAAAGCCACGGATGCCTTTaGGCAGTTGGTAAAAATCATGCCAATCTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LSGDTAESHGCL*AVGKNHANLPG
Trigger: GCCTGGCAGATTGGCATGATTTTTACCAACTGCTCAAAGGCATCCGTGGCTTTCAGCTGTGTCTCCCGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp TTTCTGTCCACTTGGGGCTTGGTTGCTAAGGCCCACTaGCAAACAGCTTACAAGGACTGTTGCTTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: FLSTWGLVAKAH*QTAYKDCCFPC
Trigger: ACAGGGGAAGCAACAGTCCTTGTAAGCTGTTTGTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGGACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp CACTGGACAATTCCTGAGCCTCATGCTCCTGAACGATaGAAGATGGCTCAATCTCCTCTTCCTCGATCTCGG +
Preference number: 3 (lower is better)
Translates to: HWTIPEPHAPER*KMAQSPLPRSR
Trigger: CCGAGATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTGTCCAGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGCTGGGGCCTCAAAGTaGAGCAAGGTTCATACTGTT +
Preference number: 3 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNAGASK*SKVHTV
Trigger: AACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGCAGACTGGTGGGCTaGGGATGGTGTAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISCRLVG*GWCRAG
Trigger: CCCTGCCCTACACCATCCCAAGCCCACCAGTCTGCA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCACTTGGGGCTTGGTaGCTAAGGCCCACTGACAAA +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSPLGAW*LRPTDK
Trigger: TTTGTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTAGACATGGAAAGCACTaGGAAATTCACAGCCAATCA +
Preference number: 3 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTRHGKH*EIHSQS
Trigger: TGATTGGCTGTGAATTTCCAAGTGCTTTCCATGTCT...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR TCA 72 bp TCCATTCTCAGAGCCCAGAAGATTGCACCCCTAAAGTaGCCCTTGGAATGGATGCTCACAGAACCCCATCTT +
Preference number: 3 (lower is better)
Translates to: SILRAQKIAPLK*PLEWMLTEPHL
Trigger: AAGATGGGGTTCTGTGAGCATCCATTCCAAGGGTCACTTTAGGGGTGCAATCTTCTGGGCTCTGAGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp TCTCGTCTGCTACCAAGGATCATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAGCAAGGTTCATACTGT +
Preference number: 3 (lower is better)
Translates to: SRLLPRIMSRGY*WGLKVEQGSYC
Trigger: ACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACATGATCCTTGGTAGCAGACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp CTGGAATTCTCACTGGCCTATCTGACTTTCTTCCCCTaGAGGTTTGGAAAGAGATGCTGCATCTCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LEFSLAYLTFFP*RFGKRCCISSA
Trigger: AGCAGACGAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGAATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp ATCTCACACCCCATCAGCCAAGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATAGAGATGGTTTGCAAG +
Preference number: 3 (lower is better)
Translates to: ISHPISQESPGQ*TIFRSIEMVCK
Trigger: CTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCCCGGAGACTCTTGGCTGATGGGGTGTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATaGCTCAATCTCCTCTTCCTCGATCTCGGAAGAGAC +
Preference number: 3 (lower is better)
Translates to: QFLSLMLLNDER*LNLLFLDLGRD
Trigger: GTCTCTTCCGAGATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGCTTACAAGGACTGTaGCTTCCCCTGTGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSSLQGL*LPLWSQ
Trigger: TTGGGACCACAGGGGAAGCAACAGTCCTTGTAAGCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp TGTTCTGATGGGGGTTGTGTGCGTAACAGGTGTGCATaGAAATCTTGTCATAAGTGGACAGCCCCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: CSDGGCVRNRCA*KSCHKWTAPGR
Trigger: TCTTCCTGGGGCTGTCCACTTATGACAAGATTTTCATGCACACCTGTTACGCACACAACCCCCATCAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp TACTTGGGAGTAACTTGGGAGCTGAAAGAGATCAGATaGGGGGAAGATAGGTCCTGTTCTGATGGGGGTTGT +
Preference number: 3 (lower is better)
Translates to: YLGVTWELKEIR*GEDRSCSDGGC
Trigger: ACAACCCCCATCAGAACAGGACCTATCTTCCCCTCATCTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp TCATATTTAATAGCCTACAGTAAATACACGGAAAGGTaGGGTCAGTGCCCGGAGAGGAGAAAGGTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: SYLIAYSKYTER*GQCPERRKVEP
Trigger: TGGCTCCACCTTTCTCCTCTCCGGGCACTGACCCCACCTTTCCGTGTATTTACTGTAGGCTATTAAATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCGACTTTCCTATCCCTaGCAGTGCCAGGACACATCC +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIRLSYP*QCQDTS
Trigger: GGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGCTGGGGCCTCAAAGTaGAGCAAGGTTCATACTGTT +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSAGASK*SKVHTV
Trigger: AACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTTATCTATCTGGAATaGCTCCAGGAGCCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFIYLE*LQEPFK
Trigger: TTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGT +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPNWVT*GRLMSS
Trigger: ACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCGACTTTCCTATCCCTaGCAGTGCCAGGACACATCC +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRLSYP*QCQDTS
Trigger: GGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTTCAAAGGGATACTCTaGGATTACAATAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEFKGIL*DYNKPH
Trigger: GTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGAA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTGATCATAGCTGACTaGATGCAGGGGCTGACACTC +
Preference number: 3 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALIIAD*MQGLTL
Trigger: GAGTGTCAGCCCCTGCATCAAGTCAGCTATGATCAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTATTGAGCCATTGCCCTaGCTGAAAGAGTTCAGTCAC +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSIEPLP*LKEFSH
Trigger: GTGACTGAACTCTTTCAGCAAGGGCAATGGCTCAAT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCAAAACACTTGGGCATaGTGCCTGGCCATAGTAAGT +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASQNTWA*CLAIVS
Trigger: ACTTACTATGGCCAGGCACAATGCCCAAGTGTTTTG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCAAAACACTTGGGCATaGTGCCTGGCCATAGTAAGT +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSQNTWA*CLAIVS
Trigger: ACTTACTATGGCCAGGCACAATGCCCAAGTGTTTTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp ATTTGTGGCCGCGAGGAGCTCAACGGCCCCAACACATaGAATATTGCACACACCTTCATAAAGCTGAAAATA +
Preference number: 3 (lower is better)
Translates to: ICGREELNGPNT*NIAHTFIKLKI
Trigger: TATTTTCAGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTGGGGCCGTTGAGCTCCTCGCGGCCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCTTCCCCTGCAGGTTaGGAAAGAGATGCTGCATCT +
Preference number: 3 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSSPAG*ERDAAS
Trigger: AGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCACTCCCTTTTGGTCTaGGGCTCTAGAAAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIHSLLV*GSRKRL
Trigger: TAGCCTCTTTCTAGAGCCCAAGACCAAAAGGGAGTG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAATCACATTGAGCCATaGCCCTTGCTGAAAGAGTTC +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSNHIEP*PLLKEF
Trigger: GAACTCTTTCAGCAAGGGCAATGGCTCAATGTGATT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGGCACAAAGCAATTCTaGGAGATAGAAATTTGGGGC +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSGTKQF*EIEIWG
Trigger: GCCCCAAATTTCTATCTCCAAGAATTGCTTTGTGCC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGT +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIPNWVT*GRLMSS
Trigger: ACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp ACCCTTTTAGAGTCATTAGTGTCCAGGCAAAACTGCTaGTGGTCCACCTCATTTGTATCATCAAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: TLLESLVSRQNC*WSTSFVSSSSC
Trigger: GCAGCTGCTTGATGATACAAATGAGGTGGACCATCAGCAGTTTTGCCTGGACACTAATGACTCTAAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp GCTTTAGAAGTGAAACTAGTTTCACTGCCGCAATTTTaGTGGCCCTACAAATCCAGCGTGCCGACTATTACA +
Preference number: 3 (lower is better)
Translates to: ALEVKLVSLPQF*WPYKSSVPTIT
Trigger: TGTAATAGTCGGCACGCTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAAACTAGTTTCACTTCTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp GCAAGCTTTGCTTTCCATTTTGGAAAACCTAAGCCGTaGTGGAGAACTTACTTACACATTCTCCGGGACGAT +
Preference number: 3 (lower is better)
Translates to: ASFAFHFGKPKP*WRTYLHILRDD
Trigger: ATCGTCCCGGAGAATGTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCCAAAATGGAAAGCAAAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTaGTCCCTACAGGAAGTAGCAGAGCACACTGTACAC +
Preference number: 3 (lower is better)
Translates to: PSSFQSLPKKAL*SLQEVAEHTVH
Trigger: GTGTACAGTGTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGG +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIIKLKI*AHHLAR
Trigger: CCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTTCCCCTGCAGGTTaGGAAAGAGATGCTGCATCT +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSSPAG*ERDAAS
Trigger: AGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGT +
Preference number: 3 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHEHRDG*QDLQTG
Trigger: ACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGAAGCACTCCCTTTaGGTCTTGGGCTCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: LETDSIALSLELKYNCVRMKHSL*VLGSRK
Trigger: CTTTCTAGAGCCCAAGACCAAAAGGGAGTGCTTCAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGCCAGGCTGTTGCTaGCTTCTAAATATAAGCCTC +
Preference number: 3 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLPGCC*LLNISL
Trigger: GAGGCTTATATTTAGAAGCAAGCAACAGCCTGGCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCAATCTGCCAGGCTGTaGCTTGCTTCTAAATATAAG +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASQSARL*LASKYK
Trigger: CTTATATTTAGAAGCAAGCAACAGCCTGGCAGATTG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCAATACGGACTTTTTaGCTTCTAATTGGTCTGCCA +
Preference number: 3 (lower is better)
Translates to: IGACESSNFALRDCFGYSPIRTF*LLIGLP
Trigger: TGGCAGACCAATTAGAAGCAAAAAAGTCCGTATTGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTCACTGCCGCAATTTaGCTGGCCCTACAAATCCAG +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFTAAI*LALQIQ
Trigger: CTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTCTAGAGAAAACAGGTaGTCTGCAAGCTTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASSRENR*SASFAF
Trigger: GAAAGCAAAGCTTGCAGACAACCTGTTTTCTCTAGA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCACTTGGGGCTTGGTaGCTAAGGCCCACTGACAAA +
Preference number: 3 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPLGAW*LRPTDK
Trigger: TTTGTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp TCGAATGCATTCTTTCTTCCCAAGAAGGAACTAAAATaGAGCTGTTCGCAGTTCAAACACGAAGGACCACAG +
Preference number: 3 (lower is better)
Translates to: SNAFFLPKKELK*SCSQFKHEGPQ
Trigger: CTGTGGTCCTTCGTGTTTGAACTGCGAACAGCTCCATTTTAGTTCCTTCTTGGGAAGAAAGAATGCATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATACTTGGGAGTAACTaGGGAGCTGAAAGAGATCAG +
Preference number: 3 (lower is better)
Translates to: LETDSIALSLELKYNCVRILGSN*GAERDQ
Trigger: CTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp TTCCAAAGTATGCACCTTTTAGCAGGCCCAAGACAATaGAAACGAACAATAGGATTCCAAGGATTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: FQSMHLLAGPRQ*KRTIGFQGFRH
Trigger: ATGCCTGAATCCTTGGAATCCTATTGTTCGTTTCCATTGTCTTGGGCCTGCTAAAAGGTGCATACTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTGATCATAGCTGACTaGATGCAGGGGCTGACACTC +
Preference number: 3 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLIIAD*MQGLTL
Trigger: GAGTGTCAGCCCCTGCATCAAGTCAGCTATGATCAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCACTATTTTCTGACTaGGTTCAGTGTACCCTACCA +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISLFSD*VQCTLP
Trigger: TGGTAGGGTACACTGAACCAAGTCAGAAAATAGTGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAGGGACTTCTTTTTCTaGTATGGTTTCTTACTCATC +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASRDFFF*YGFLLI
Trigger: GATGAGTAAGAAACCATACAAGAAAAAGAAGTCCCT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGCACTAGGACAAGCTaGTCTACCCCTGAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSTRTS*STPERN
Trigger: ATTTCTTTCAGGGGTAGACAAGCTTGTCCTAGTGCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCTAGAGAAAACAGGTaGTCTGCAAGCTTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISRENR*SASFAF
Trigger: GAAAGCAAAGCTTGCAGACAACCTGTTTTCTCTAGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTCAGCTCCTACCCTTaGTTTAGAAAGAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFSSYP*FRKRKK
Trigger: TTTCTTTCTCTTTCTAAACAAAGGGTAGGAGCTGAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp ACTGATTACAACCTCAAAGGCCCATCATCCCTCATTTaGATTCGAATGCATTCTTTCTTCCCAAGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: TDYNLKGPSSLI*IRMHSFFPRRN
Trigger: GTTCCTTCTTGGGAAGAAAGAATGCATTCGAATTCAAATGAGGGATGATGGGCCTTTGAGGTTGTAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp CTGATTGTGACCACATTACCATACGTGGACGTGCAGTaGCTTTTAAGGGTATATGGGCTTTACAATGAACAT +
Preference number: 3 (lower is better)
Translates to: LIVTTLPYVDVQ*LLRVYGLYNEH
Trigger: ATGTTCATTGTAAAGCCCATATACCCTTAAAAGTCACTGCACGTCCACGTATGGTAATGTGGTCACAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp CTGCATCCCCAGAGGACCTCCAGTGACTTGTTTCAATaGAGTGTTCTATTCTCAAATTGCATCAATTACCAT +
Preference number: 3 (lower is better)
Translates to: LHPQRTSSDLFQ*SVLFSNCINYH
Trigger: ATGGTAATTGATGCAATTTGAGAATAGAACACTTCATTGAAACAAGTCACTGGAGGTCCTCTGGGGATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp ACAATATTCAGGAGCATAGAGATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATGATCTCACAACAAGGA +
Preference number: 3 (lower is better)
Translates to: TIFRSIEMVCKI*RQVPLMISQQG
Trigger: TCCTTGTTGTGAGATCATAAGAGGTACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp GGTACCTCTTATGATCTCACAACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGCTCTACACTAATGCTA +
Preference number: 3 (lower is better)
Translates to: GTSYDLTTRNVH*QIFGLRSTLML
Trigger: TAGCATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGTTGTGAGATCATAAGAGGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp AACTGCTGGGACACACAGTCACTCTTGTTTAATCTTTaGAGGAACTATTATCCCAAGTGGCTGCATCATTTT +
Preference number: 3 (lower is better)
Translates to: NCWDTQSLLFNL*RNYYPKWLHHF
Trigger: AAAATGATGCAGCCACTTGGGATAATAGTTCCTCCAAAGATTAAACAAGAGTGACTGTGTGTCCCAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGG +
Preference number: 3 (lower is better)
Translates to: SNTQTMLPSIISFVGETFIKLKI*AHHLAR
Trigger: CCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGT +
Preference number: 3 (lower is better)
Translates to: SNTQTMLPSIISFVGETFEHRDG*QDLQTG
Trigger: ACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCCTCGAAAACACTGGTaGAAAACATTTGTAGATATC +
Preference number: 3 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAPRKHW*KTFVDI
Trigger: GATATCTACAAATGTTTTCAACCAGTGTTTTCGAGG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCCAATACGGACTTTTTaGCTTCTAATTGGTCTGCCA +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISPIRTF*LLIGLP
Trigger: TGGCAGACCAATTAGAAGCAAAAAAGTCCGTATTGG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGGACACTTACAACCTTaGTACTGTCTTTTCTATGTC +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIGHLQP*YCLFYV
Trigger: GACATAGAAAAGACAGTACAAAGGTTGTAAGTGTCC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCAGGCTTTTAAGTCTTaGAGAGGATCTTCTTGTGAG +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISQAFKS*RGSSCE
Trigger: CTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCTG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTATCTATCTGGAATaGCTCCAGGAGCCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFIYLE*LQEPFK
Trigger: TTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATACTTGGGAGTAACTaGGGAGCTGAAAGAGATCAG +
Preference number: 3 (lower is better)
Translates to: SNTQTMLPSIISFVGETFILGSN*GAERDQ
Trigger: CTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAATCACATTGAGCCATaGCCCTTGCTGAAAGAGTTC +
Preference number: 3 (lower is better)
Translates to: SNTQTMLPSIISFVGETFNHIEP*PLLKEF
Trigger: GAACTCTTTCAGCAAGGGCAATGGCTCAATGTGATT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCCCATCATCCCTCATTaGAATTCGAATGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISPIIPH*NSNAFF
Trigger: AAAGAATGCATTCGAATTCAAATGAGGGATGATGGG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp TTACTCATCGTTTCTGAGACAGAATTTTTCATCAGCTaGACCAGACCTCAAGATATTCTGTATCTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LLIVSETEFFIS*TRPQDILYLSW
Trigger: CCAGCTGAGATACAGAATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTCTGTCTCAGAAACGATGAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp GTGGGAAATGAAGATTCATGTAGTAACTGGCTCACATaGAGGCCTACCATTTGTATCGTACATTCAATTCAC +
Preference number: 3 (lower is better)
Translates to: VGNEDSCSNWLT*RPTICIVHSIH
Trigger: GTGAATTGAATGTACGATACAAATGGTAGGCCTTCATGTGAGCCAGTTACTACATGAATCTTCATTTCCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp TACAGTTCATCTGCTAACCCTTCAAAGGGATACTCTTaGATTACAATAAACCCCACATTTACTCTAGGCAGA +
Preference number: 3 (lower is better)
Translates to: YSSSANPSKGYS*ITINPTFTLGR
Trigger: TCTGCCTAGAGTAAATGTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGAAGGGTTAGCAGATGAACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp CTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTaGATCTTAGAACCCACATCTCAATATCCCACTATC +
Preference number: 3 (lower is better)
Translates to: LPHSKVHKSMSL*ILEPTSQYPTI
Trigger: GATAGTGGGATATTGAGATGTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CCA 72 bp GTAACAAACAAGGCAACTTCTAATCTGCATACAACATaGAGACCGATTTTCAGATTCCAAAGGAGGATCGAA +
Preference number: 3 (lower is better)
Translates to: VTNKATSNLHTT*RPIFRFQRRIE
Trigger: TTCGATCCTCCTTTGGAATCTGAAAATCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCTTGTTTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATGAAGGCCTACCATTaGTATCGTACATTCAATTCA +
Preference number: 3 (lower is better)
Translates to: DETEGLKRVSKLWPVSISMKAYH*YRTFNS
Trigger: TGAATTGAATGTACGATACAAATGGTAGGCCTTCAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp ATAAGTAAAGTTTTACGGGACCACAGCCACACTTACTaGTTTACATATTATCCATGCAGCCTCTGCAATACA +
Preference number: 3 (lower is better)
Translates to: ISKVLRDHSHTY*FTYYPCSLCNT
Trigger: TGTATTGCAGAGGCTGCATGGATAATATGTAAATCAGTAAGTGTGGCTGTGGTCCCGTAAAACTTTACTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp CTTCTTTTTCTTGTATGGTTTCTTACTCATCGTTTCTaGGACAGAATTTTTCATCAGCTGAACCAGACCTCA +
Preference number: 3 (lower is better)
Translates to: LLFLVWFLTHRF*DRIFHQLNQTS
Trigger: TGAGGTCTGGTTCAGCTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAGAAACCATACAAGAAAAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR GCA 72 bp AGCCTAATAGAATCTTGCTGTCAAACACACAAACTATaGTTCCAAGTATCATTTCTTTTGTGGGGGAAACTT +
Preference number: 3 (lower is better)
Translates to: SLIESCCQTHKL*FQVSFLLWGKL
Trigger: AAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGACAGCAAGATTCTATTAGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp ACAACATACTTTATAATACATGGCGTGACTAGAGACTaGCAGCATAGCTCTGAGCTTAGAATTAAAGTACAA +
Preference number: 3 (lower is better)
Translates to: TTYFIIHGVTRD*QHSSELRIKVQ
Trigger: TTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAGTCACGCCATGTATTATAAAGTATGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR TCA 72 bp TTGTTACTGTCCATCTTTGACTATACCCATAATGTGTaGAGTTGCATCTCAACTGTGGTTTTGATTTGCATT +
Preference number: 3 (lower is better)
Translates to: LLLSIFDYTHNV*SCISTVVLICI
Trigger: AATGCAAATCAAAACCACAGTTGAGATGCAACTTCACACATTATGGGTATAGTCAAAGATGGACAGTAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCCCACCGTCTGGCAGCTaGAGGGCTGGCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACPPSGS*RAGLPF
Trigger: GAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGTGG...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTCGTGTCACTGTGTCTaGTGGGGGTTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCSCHCV*WGLGWW
Trigger: CCACCAGCCCAACCCCCACCAGACACAGTGACACGA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGATCAAGGAGGGAGACTaGCTTCAGGGCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TSPGAASRRETDFRAEGRIKEGD*LQGRGE
Trigger: CTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGAT...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCCACAGTGGTCCGCCCTaGCTGTCTGTCTACTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCHSGPP*LSVYCA
Trigger: TGCACAGTAGACAGACAGGCAGGGCGGACCACTGTG...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCTCACTCAGTGCCCCATaGCTTTTGGCCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGSLSAP*LLALVL
Trigger: CAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGA...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCGAGTGGCGGTTCTGCTaGGATCTGCTGTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGEWRFC*DLLFDL
Trigger: CAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTC...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTTCTCCAGGCTGGGGTaGCAAGAGTTGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCFSRLG*QELQAV
Trigger: AACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTTTGGGTCTGCAGATCTaGGATCTTCTCGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHALGLQI*DLLGAP
Trigger: TGGCGCCCCGAGAAGATCTCAGATCTGCAGACCCAA...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGGGACGCACGGAGTGTaGGGCTTCTTTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACGTHGV*GFFGSP
Trigger: TGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGGCACTATGCCAGTCGTaGACTTCACAGCATCGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPGAASRRETDFRAEGRALCQS*TSQHRL
Trigger: CAGGCGATGCTGTGAAGTTCACGACTGGCATAGTGC...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCGCTGTTGGCTCTAGCTaGCATCCCTTGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCAVGSS*HPLPYA
Trigger: AGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGC...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCCTGCCGGATGTTGCTaGTCCCGCCAGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPPAGCC*SRQRPG
Trigger: GCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRAGGLA*PSVRVP
Trigger: AGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRAGGLA*PSVRVP
Trigger: AGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGACCAGCCGCAGGCTTaGAGAAGTCACTTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACDQPQA*RSHLPV
Trigger: GACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCTGGTGGGGGTTGGGCTaGTGGGAGAATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGWWGLG*WENSSL
Trigger: TAGACTTGAATTCTCCCACCAGCCCAACCCCCACCA...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCTCGTGTCACTGTGTCTaGTGGGGGTTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACSCHCV*WGLGWW
Trigger: CCACCAGCCCAACCCCCACCAGACACAGTGACACGA...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCACTCCCTGTTCGTTCTaGGAGACGGTTCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGTPCSF*ETVPNP
Trigger: GGGATTTGGAACCGTCTCCCAGAACGAACAGGGAGT...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCAAAGAGCTTCTAGCCTaGGCAACAAGGCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCKELLA*ATRRDP
Trigger: GGGGTCTCGCCTTGTTGCCCAGGCTAGAAGCTCTTT...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTGCCTTGGGACCCCTCTaGGGCCAATTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHAALGPL*GQFSEY
Trigger: GTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGC...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTAACATGGGCTCACAGTaGTCCGCCCTGCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHANMGSQ*SALPVC
Trigger: ACAGACAGGCAGGGCGGACCACTGTGAGCCCATGTT...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGGACCCCACAGCTCCTaGGGACGCCGTCGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNGPHSS*GRRRRF
Trigger: AAAGCGGCGACGGCGTCCTCAGGAGCTGTGGGGTCC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATTCAGAGTGTGGGTCATaGTACACTCCACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHSECGS*YTPPSD
Trigger: GTCTGAGGGTGGAGTGTATCATGACCCACACTCTGA...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGGGACGCACGGAGTGTaGGGCTTCTTTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEGTHGV*GFFGSP
Trigger: TGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCATCGGGCACATGGAAGTaGCTCGGACCTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLASGTWK*LGPGVL
Trigger: CAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGA...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTAGCTGTTCTCCAGGCTaGGGTGACAAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHASCSPG*GDKSCR
Trigger: CCTGCAACTCTTGTCACCCCAGCCTGGAGAACAGCT...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGGAGTGTCGGGCACATaGAAGTGCCTCGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRGVSGT*KCLGPG
Trigger: TCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGGTGATTCAGGGCATTaGGACCAGCCGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRGDSGH*DQPQAC
Trigger: GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGGAAGGGCCCTCTGTaGCACTCCTGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRKGPL*HSWSQR
Trigger: CCTCTGTGACCAGGAGTGCCACAGAGGGCCCTTCCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCAGACTGGTGGGCTTaGGATGGTGTAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLADWWA*DGVGQG
Trigger: ACCCTGCCCTACACCATCCCAAGCCCACCAGTCTGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGCATGACTGCTGGATTTaGCCACTTGGGCTACAACCC +
Preference number: 4 (lower is better)
Translates to: TSPGAASRRETDFRAEGRHDCWI*PLGLQP
Trigger: GGGTTGTAGCCCAAGTGGCCAAATCCAGCAGTCATG...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGCCTGGCTCAGGGGGTaGATCCGAATTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACAWLRG*IRISEK
Trigger: CTTCTCAGAAATTCGGATTCACCCCCTGAGCCAGGC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAACTGGAGATTGGACGATaGAGGGCTCGGTTTGGGACG +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAELEIGR*RARFGT
Trigger: CGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAG...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTCTTCACAGCATCGCCTaGAACTTGTCCGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTLHSIA*NLSGGG
Trigger: ACCTCCCCCGGACAAGTTTCAGGCGATGCTGTGAAG...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTCCATCCCTTGCCCTATaGTCAAGCTTCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHAPSLAL*SSFHPS
Trigger: GCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGG...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCGGTTGGTTCCAGAACTaGTCTCTGATGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGGWFQN*SLMVEK
Trigger: CTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACC...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTCGGTGCGGGTTCCTaGCGGATGTTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRFGAGS*RMLLLP
Trigger: CGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRWPALR*GFLPDV
Trigger: AACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCA...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGTGCCCCATGGCTTTTaGCCTTGGTCCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRVPHGF*PWSCRR
Trigger: CCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCAC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTGTGCCCCATGGCTTTTaGCCTTGGTCCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTVPHGF*PWSCRR
Trigger: CCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCAC...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGTGCCCCATGGCTTTTaGCCTTGGTCCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLVPHGF*PWSCRR
Trigger: CCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCAC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATGACTTCTGGCGTGTATaGAAGGAAGAGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHDFWRV*KEEVPS
Trigger: AGAAGGCACCTCTTCCTTCCATACACGCCAGAAGTC...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTATCACATCCACCGTCTaGCAGCTGGAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAITSTV*QLEGWP
Trigger: AGGCCAGCCCTCCAGCTGCCAGACGGTGGATGTGAT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTATCACATCCACCGTCTaGCAGCTGGAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLITSTV*QLEGWP
Trigger: AGGCCAGCCCTCCAGCTGCCAGACGGTGGATGTGAT...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTGAGCCGTCTGCTCACTaGACAATTCCTGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIEPSAH*TIPEPH
Trigger: ATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTC...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CAA 72 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTaGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTT +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLA*GPLWGQFSEYL
Trigger: AAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGGACCCCACAGCTCCTaGGGACGCCGTCGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQGPHSS*GRRRRF
Trigger: AAAGCGGCGACGGCGTCCTCAGGAGCTGTGGGGTCC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379996.7
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGACCCCACAGCTCCTaGGGACGCCGTCGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGPHSS*GRRRRF
Trigger: AAAGCGGCGACGGCGTCCTCAGGAGCTGTGGGGTCC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCTTCTTTCCAAGGACTaGGGATGGTTAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHLLSKD*GWLTAG
Trigger: TCCAGCTGTTAACCATCCTCAGTCCTTGGAAAGAAG...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIICCLT*GTLSLG
Trigger: GCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGAT...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATGTCCCAGCTTTGCTTTaGGAGCTTTCCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHVPALL*ELSMNE
Trigger: CTCATTCATGGAAAGCTCTCAAAGCAAAGCTGGGAC...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATTCTCCAGGCTGGGGTaGCAAGAGTTGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRFSRLG*QELQAV
Trigger: AACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATCTGAGGAAGCCGGGTaGTTTGAGGCCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSEEAG*FEAEER
Trigger: TCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCCTGGCTCAGGGGGTaGATCCGAATTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLAWLRG*IRISEK
Trigger: CTTCTCAGAAATTCGGATTCACCCCCTGAGCCAGGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGCTGGGTTGGGCAGCTaGAAGCATCAGTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPAGLGS*KHQCLG
Trigger: TCCGAGGCACTGATGCTTTCAGCTGCCCAACCCAGC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCTTTACCTGGGCCCTGTaGATCAGGGCTTCCCTCATA +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACFTWAL*IRASLI
Trigger: TATGAGGGAAGCCCTGATTCACAGGGCCCAGGTAAA...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCAACCAGGATCCATCTaGCCTGGCAGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEQPGSI*PGSWRA
Trigger: AGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGCTGTTGGCTCTAGCTaGCATCCCTTGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRAVGSS*HPLPYA
Trigger: AGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCCCTGCCGGATGTTGCTaGTCCCGCCAGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTPAGCC*SRQRPG
Trigger: GCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGG...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTCGGTGCGGGTTCCTaGCGGATGTTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNFGAGS*RMLLLP
Trigger: CGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNWPALR*GFLPDV
Trigger: AACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAACATGGCTTTTGGCCTTaGTCCTGTAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEHGFWP*SCRRDS
Trigger: GGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATG...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTGTGCCCCATGGCTTTTaGCCTTGGTCCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAVPHGF*PWSCRR
Trigger: CCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCAC...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATCACTCAGTGCCCCATaGCTTTTGGCCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSLSAP*LLALVL
Trigger: CAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGGTTGCTCACAGACTTaGAGTCACTCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAGCSQT*SHSVPH
Trigger: ATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACC...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGCTGTTCTCCAGGCTaGGGTGACAAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSCSPG*GDKSCR
Trigger: CCTGCAACTCTTGTCACCCCAGCCTGGAGAACAGCT...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCTGTTCTCCAGGCTaGGGTGACAAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSCSPG*GDKSCR
Trigger: CCTGCAACTCTTGTCACCCCAGCCTGGAGAACAGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTGCCATCATCAGAGTGTaGGTCATGATACACTCCACC +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHAAIIRV*VMIHST
Trigger: GGTGGAGTGTATCATGACCCACACTCTGATGATGGC...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATAGGGAGCAGGACTaGAGATTGGACGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLADREQD*RLDDEG
Trigger: CCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATC...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGATAGGGAGCAGGACTaGAGATTGGACGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACDREQD*RLDDEG
Trigger: CCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATCGGACCTGGAGTACTaGATAGGGAGCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSDLEY*IGSRTG
Trigger: TCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTCAGTGCCTCGGACCTaGAGTGTCGGGCACATGGAA +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLSVPRT*SVGHME
Trigger: TTCCATGTGCCCGACACTCCAGGTCCGAGGCACTGA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGAGAACCCGGATTGCTaGGTTGGGCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEENPDC*VGQLKA
Trigger: TGCTTTCAGCTGCCCAACCCAGCAATCCGGGTTCTC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGTGCCGCATTCTCATaGTATGTCAGGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACSAAFS*YVRSAA
Trigger: AGCTGCGCTCCTGACATACCATGAGAATGCGGCACT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGGATCCATCTGACCTaGCAGCTGGAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERIHLT*QLEGWP
Trigger: AGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTGCCAATCATGACTGCTaGATTTGGCCACTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHAANHDC*IWPLGL
Trigger: TAGCCCAAGTGGCCAAATCCAGCAGTCATGATTGGC...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAICCLT*GTLSLG
Trigger: GCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGAT...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCVRCRQ*MGMATV
Trigger: GACAGTAGCCATTCCCATTCACTGTCTGCACCTCAC...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATGATGGTGCTGAGGTaGCTTCCCTCAAGGATGACC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLMMVLR*LPSRMT
Trigger: GGTCATCCTTGAGGGAAGTCACCTCAGCACCATCAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGGCGTGACTAGAGACTaGCAGCATAGCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLGVTRD*QHSSEL
Trigger: AAGCTCAGAGCTATGCTGTCAGTCTCTAGTCACGCC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTATTCACAGCCAATCATaGCTGCTGGATTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIIHSQS*LLDLAT
Trigger: AGTGGCCAAATCCAGCAGTCATGATTGGCTGTGAAT...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTCATGCTCCTGAACGATaGAAGATGGCTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHAHAPER*KMAQSP
Trigger: AGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATG...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTCCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAPRLAA*LVGFGV
Trigger: CACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGG...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAACCATCCCTTGCCCTATaGTCAAGCTTCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEPSLAL*SSFHPS
Trigger: GCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGG...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAAGGLA*PSVRVP
Trigger: AGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCCTATCCCTTGCAGTaGCAGGACACATCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSYPLQ*QDTSWH
Trigger: ATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCGATCTTGGCTCACTaGAACCTCTGCCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLAILAH*NLCLLG
Trigger: ACCCAAAAGGCAGAGGTTGCAGTGAGCCAAGATCGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCACCGATACCATCTGGTaGCAACGTACTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCTDTIW*QRTLCN
Trigger: ATTACACAGAGTACGTTGCCACCAGATGGTATCGGT...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGCCTACACTCAGGTTCTaGATGTCCTTGCTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: TSPGAASRRETDFRAEGRPTLRF*MSLLLD
Trigger: ATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGG...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTAGTACCTACTGGTACTaGGCTCCGCAATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLSTYWY*APQFGP
Trigger: GGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTTGGGGGTTGGGCTGGTaGGAGAATTCAAGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCWGLGW*ENSSLS
Trigger: GCTTAGACTTGAATTCTCCCACCAGCCCAACCCCCA...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGGGAAGAAAAGGGGCTaGTGTAGCCCAGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRGKKRG*CSPVHK
Trigger: CTTATGGACTGGGCTACACCAGCCCCTTTTCTTCCC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTAGCTGTTCTCCAGGCTaGGGTGACAAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLSCSPG*GDKSCR
Trigger: CCTGCAACTCTTGTCACCCCAGCCTGGAGAACAGCT...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGACCACCCTCAGACTTCTaGCGTGTATGGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRPPSDF*RVWKEE
Trigger: CTCTTCCTTCCATACACGCCAGAAGTCTGAGGGTGG...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGCCACCGTCTGGCAGCTaGAGGGCTGGCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGPPSGS*RAGLPF
Trigger: GAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGTGG...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGATGAAGGGCTCGGTTTaGGACGCACGGAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRMKGSV*DARSVR
Trigger: CCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCAT...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGATGAAGGGCTCGGTTTaGGACGCACGGAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPMKGSV*DARSVR
Trigger: CCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCAT...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAAGCAGGACTGGAGATTaGACGATGAAGGGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAESRTGD*TMKGSV
Trigger: AACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCT...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCACATGTGCTCGCCTGTTaGAGAGTACAGCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAHVLAC*RVQLNF
Trigger: GAAGTTGAGCTGTACTCTCCAACAGGCGAGCACATG...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGCTCTGCAGACTGGTaGGCTTGGGATGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESSADW*AWDGVG
Trigger: CCCTACACCATCCCAAGCCCACCAGTCTGCAGAGCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTACTGGCCATGTATGGTaGCGTGTGCCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTTGHVW*RVPVVP
Trigger: TGGAACTACAGGCACACGCCACCATACATGGCCAGT...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHGPSTF*IVKSWS
Trigger: TGACCAACTTTTTACTATTCAGAAGGTGCTAGGACC...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHALLDLW*DCKAVL
Trigger: AAGTACTGCTTTGCAGTCTCACCACAGATCTAACAG...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCCTGAGATCTGCTGTTTaGCTTGAGGTACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACLRSAV*LEVLCP
Trigger: GGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAG...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLVRCRQ*MGMATV
Trigger: GACAGTAGCCATTCCCATTCACTGTCTGCACCTCAC...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGTTCTCCAGGCTGGGGTaGCAAGAGTTGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQFSRLG*QELQAV
Trigger: AACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAA...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGCCTGGCTCAGGGGGTaGATCCGAATTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRAWLRG*IRISEK
Trigger: CTTCTCAGAAATTCGGATTCACCCCCTGAGCCAGGC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCACCGAATCACATTaGGCCATTGCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSTESH*AIALAE
Trigger: TTCAGCAAGGGCAATGGCTCAATGTGATTCGGTGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACATGTTGACAGGGAACTaGTGGGCCACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNMLTGN*WATEPP
Trigger: TGGGGGCTCTGTGGCCCATCAGTTCCCTGTCAACAT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATTGCACCCCTAAAGTaGCCCTTGGAATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIAPLK*PLEWML
Trigger: GAGCATCCATTCCAAGGGTCACTTTAGGGGTGCAAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCAGAATCCGATTTCTATaGGGGTCCAAAAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: LLDLATWATTLALGPLWGRIRFL*GSKRYE
Trigger: TTCATACCTTTTGGACCCTCATAGAAATCGGATTCT...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCCCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRPRLAA*LVGFGV
Trigger: CACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGG...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGCCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALPRLAA*LVGFGV
Trigger: CACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGG...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLLAAIP*PMLKLP
Trigger: TGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAG...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTGTTGGCTCTAGCTaGCATCCCTTGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQAVGSS*HPLPYA
Trigger: AGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGC...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEFLWGL*HHQSVG
Trigger: ACCCACACTCTGATGATGGCACAGCCCCCAAAGAAA...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFLWGL*HHQSVG
Trigger: ACCCACACTCTGATGATGGCACAGCCCCCAAAGAAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCTGCCGGATGTTGCTaGTCCCGCCAGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRPAGCC*SRQRPG
Trigger: GCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQWPALR*GFLPDV
Trigger: AACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATCACTTGCCCGTCAGTaGCGCATTCTCATGGTATGT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSLARQ*RILMVC
Trigger: ACATACCATGAGAATGCGGCACTGACGGGCAAGTGA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGACGGAAACCAGGCCTaGTGGAATTCTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEDGNQA*WNSHWP
Trigger: AGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCCGTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCCAAAGAGAAATCCTaGACCCATCAGCCAACACTC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPKEKS*THQPTL
Trigger: GAGTGTTGGCTGATGGGTGCAGGATTTCTCTTTGGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGGATGGTTAACAGCTaGAAACCGGAGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRRMVNS*KPEPME
Trigger: TTCCATGGGCTCCGGTTTCCAGCTGTTAACCATCCT...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGGTTTTGGTGTGCAGTaGACTAAGACTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRGFGVQ*TKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGTCACTCAGTGCCCCATaGCTTTTGGCCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRSLSAP*LLALVL
Trigger: CAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGA...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGTGTCTGGTGGGGGTTaGGCTGGTGGGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRVSGGG*AGGRIQ
Trigger: TTGAATTCTCCCACCAGCCCAACCCCCACCAGACAC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGTGTCTGGTGGGGGTTaGGCTGGTGGGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRVSGGG*AGGRIQ
Trigger: TTGAATTCTCCCACCAGCCCAACCCCCACCAGACAC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGACTTCTGGCGTGTATaGAAGGAAGAGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEDFWRV*KEEVPS
Trigger: AGAAGGCACCTCTTCCTTCCATACACGCCAGAAGTC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGACTTCTGGCGTGTATaGAAGGAAGAGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLDFWRV*KEEVPS
Trigger: AGAAGGCACCTCTTCCTTCCATACACGCCAGAAGTC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGTCTGGACGTGGAGATaGCACTCTGTAAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEVWTWR*HSVKAT
Trigger: GGTAGCTTTTACAGAGTGCCATCTCCACGTCCAGAC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGTCTGGACGTGGAGATaGCACTCTGTAAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLVWTWR*HSVKAT
Trigger: GGTAGCTTTTACAGAGTGCCATCTCCACGTCCAGAC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTGTCTGGACGTGGAGATaGCACTCTGTAAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTVWTWR*HSVKAT
Trigger: GGTAGCTTTTACAGAGTGCCATCTCCACGTCCAGAC...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTTCAGGACTTTTCCATaGATCGAATGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCFRTFP*IECWLS
Trigger: AGACAACCAGCATTCGATCCATGGAAAAGTCCTGAA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACSVRLL*VTTAEV
Trigger: TACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTAGTGCCGCATTCTCATaGTATGTCAGGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQASAAFS*YVRSAA
Trigger: AGCTGCGCTCCTGACATACCATGAGAATGCGGCACT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGGACCACTGTTTGTTTaGGGGGCTGTCCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEGPLFV*GAVLCM
Trigger: CATGCACAGGACAGCCCCCCAAACAAACAGTGGTCC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTGGTGGGCTTGGGATaGTGTAGGGCAGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLVGLG*CRAGFL
Trigger: GAGAAACCCTGCCCTACACCATCCCAAGCCCACCAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTAGCATTATTGCCTTCTaGCAGATTACGAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: RGGASEPSAHWTIPEPHASIIAF*QITSKT
Trigger: GGTTTTGCTCGTAATCTGTCAGAAGGCAATAATGCT...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTTCTTTCCAAGGACTaGGGATGGTTAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLLSKD*GWLTAG
Trigger: TCCAGCTGTTAACCATCCTCAGTCCTTGGAAAGAAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGTCCCTGGGCCTTCTaGAGGCTTTGGGTCAATATT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQACPWAF*RLWVNI
Trigger: AATATTGACCCAAAGCCTTCAGAAGGCCCAGGGACA...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAACTGAGATCTGCTGTTTaGCTTGAGGTACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAELRSAV*LEVLCP
Trigger: GGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAG...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAGTGGCGGTTCTGCTaGGATCTGCTGTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEEWRFC*DLLFDL
Trigger: CAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTTCTTCCAGAAGGGCTaGGCAAAGTTCTCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLFFQKG*AKFSCH
Trigger: GTGACACGAGAACTTTGCTCAGCCCTTCTGGAAGAA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQELWRSL*PKILPQ
Trigger: CTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGTCAGAGTGTGGGTCATaGTACACTCCACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPSECGS*YTPPSD
Trigger: GTCTGAGGGTGGAGTGTATCATGACCCACACTCTGA...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTGGAGTGCTAGCAGAATaGATGGATTTCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCGVLAE*MDFCNV
Trigger: GACGTTGCAGAAATCCATTCATTCTGCTAGCACTCC...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGCTGGGTTGGGCAGCTaGAAGCATCAGTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQAGLGS*KHQCLG
Trigger: TCCGAGGCACTGATGCTTTCAGCTGCCCAACCCAGC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGTTTACCTGGGCCCTGTaGATCAGGGCTTCCCTCATA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPFTWAL*IRASLI
Trigger: TATGAGGGAAGCCCTGATTCACAGGGCCCAGGTAAA...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCAACCAGGATCCATCTaGCCTGGCAGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSQPGSI*PGSWRA
Trigger: AGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCCAGGCAAAACTGCTaGTGGTCCACCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSRQNC*WSTSFV
Trigger: TACAAATGAGGTGGACCATCAGCAGTTTTGCCTGGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCTCAAACTACCACGTaGGTGTCTAGCGACGTGCAA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEPQTTT*VSSDVQ
Trigger: TTGCACGTCGCTAGACACTCACGTGGTAGTTTGAGG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAGAATGGAGAGCACTaGCTTTCAGCTCCTACCCTT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKNGEH*LSAPTL
Trigger: AAGGGTAGGAGCTGAAAGTCAGTGCTCTCCATTCTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCAGAGGACCTCCAGTaGCTTGTTTCAATGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPEDLQ*LVSMKC
Trigger: ACACTTCATTGAAACAAGTCACTGGAGGTCCTCTGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPLGVTQ*PMAFGL
Trigger: AAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPLAAIP*PMLKLP
Trigger: TGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGGTTGGTTCCAGAACTaGTCTCTGATGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRGWFQN*SLMVEK
Trigger: CTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACGTTCCTGCCGGATGTTaGTGCTCCCGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDVPAGC*CSRQRP
Trigger: AGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAAC...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAWPALR*GFLPDV
Trigger: AACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTCGGGCACATGGAAGTaGCTCGGACCTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSSGTWK*LGPGVL
Trigger: CAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCGACCAGCCGCAGGCTTaGAGAAGTCACTTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTDQPQA*RSHLPV
Trigger: GACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTC...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTGACTTTCTTCCCCTaGAGGTTTGGAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLTFFP*RFGKRC
Trigger: GCATCTCTTTCCAAACCTGCAGGGGAAGAAAGTCAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGCGATCTTGGCTCACTaGAACCTCTGCCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEAILAH*NLCLLG
Trigger: ACCCAAAAGGCAGAGGTTGCAGTGAGCCAAGATCGC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTGGAAGAAATTCTCACTaGTTGGTGGGAACTTTCACA +
Preference number: 4 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIGRNSH*LVGTFT
Trigger: TGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCC...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATTAGGAAGCTTTCATTaGCAGGGAGACCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRLGSFH*QGDLRQ
Trigger: CTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCTGGGCTAAGAAGGTGTaGTATGTTGTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACWAKKV*YVVVGE
Trigger: CTCACCAACAACAACATACCACACCTTCTTAGCCCA...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATCATGGCTTTTGGCCTTaGTCCTGTAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDHGFWP*SCRRDS
Trigger: GGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATG...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTATGGGAAGTACCTACTaGTACTGGGCTCCGCAATTT +
Preference number: 4 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCMGSTY*YWAPQF
Trigger: AAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCAT...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGTGGGGGTTGGGCTGGTaGGAGAATTCAAGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQWGLGW*ENSSLS
Trigger: GCTTAGACTTGAATTCTCCCACCAGCCCAACCCCCA...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGTGGTGGGGGTTGGGCTaGTGGGAGAATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQWWGLG*WENSSL
Trigger: TAGACTTGAATTCTCCCACCAGCCCAACCCCCACCA...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTGGTGGGGGTTGGGCTaGTGGGAGAATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEWWGLG*WENSSL
Trigger: TAGACTTGAATTCTCCCACCAGCCCAACCCCCACCA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGTGTCTGGTGGGGGTTaGGCTGGTGGGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNVSGGG*AGGRIQ
Trigger: TTGAATTCTCCCACCAGCCCAACCCCCACCAGACAC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGGGAAGAAAAGGGGCTaGTGTAGCCCAGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPGKKRG*CSPVHK
Trigger: CTTATGGACTGGGCTACACCAGCCCCTTTTCTTCCC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGGGGAAGAAAAGGGGCTaGTGTAGCCCAGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALGKKRG*CSPVHK
Trigger: CTTATGGACTGGGCTACACCAGCCCCTTTTCTTCCC...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTTCCATCCAAGCCCTTaGCTCTCACTTTGTCACGGG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEFHPSP*LSLCHG
Trigger: CCCGTGACAAAGTGAGAGCCAAGGGCTTGGATGGAA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCATTTAATGGCTGGCTTTaGGTCTGCAGATCTGAGATC +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAFNGWL*VCRSEI
Trigger: GATCTCAGATCTGCAGACCCAAAGCCAGCCATTAAA...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTCAGTGCCTCGGACCTaGAGTGTCGGGCACATGGAA +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSSVPRT*SVGHME
Trigger: TTCCATGTGCCCGACACTCCAGGTCCGAGGCACTGA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTCACACAAGACCTGTaGGGAGTGGCGATCCCTAAG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLTQDL*GVAIPK
Trigger: CTTAGGGATCGCCACTCCCCACAGGTCTTGTGTGAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCGAATGCCACAGCATaGCAACGGGACCGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSNATA*QRDRAV
Trigger: AACTGCACGGTCCCGTTGCCATGCTGTGGCATTCGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTTCTTGTGAGATTCTaGCCCTGGGAATTAGCGACA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLLVRF*PWELAT
Trigger: TGTCGCTAATTCCCAGGGCCAGAATCTCACAAGAAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCTGCCACTTCCAAACTaGGTGACCTTGGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQELPLPN*VTLGRL
Trigger: TAACCTGCCCAAGGTCACCCAGTTTGGAAGTGGCAG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTGTCCCTGGGCCTTCTaGAGGCTTTGGGTCAATATT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQECPWAF*RLWVNI
Trigger: AATATTGACCCAAAGCCTTCAGAAGGCCCAGGGACA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTTTGAGAGCTTTCCATaGATGAGTGGCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLFESFP*MSGGSA
Trigger: AGCAGAACCGCCACTCATTCATGGAAAGCTCTCAAA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCGGTTGTGGTTCGACGTaGGTCCAGCGTTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSGCGST*VQRSLI
Trigger: AATGAGGGAACGCTGGACTCACGTCGAACCACAACC...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTACATAGAATGCCTATaGGGACGTTGCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTYIECL*GRCWEE
Trigger: TTCTTCCCAGCAACGTCCTCATAGGCATTCTATGTA...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTTGGGTCTGCAGATCTaGGATCTTCTCGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQLGLQI*DLLGAP
Trigger: TGGCGCCCCGAGAAGATCTCAGATCTGCAGACCCAA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGAATTTTTGGTTTGTTaGGCTGTTAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACEFLVC*AVKGWK
Trigger: CTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCTCACTGGCCTATCTaGCTTTCTTCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSHWPI*LSSPAG
Trigger: ACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGACTTCCCTCAAGGATaGCCCAGAGGCATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSDFPQG*PRGMGG
Trigger: TCCTCCCATGCCTCTGGGTCATCCTTGAGGGAAGTC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAGAGGATCTTCTTGTaGGATTCTGGCCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEERIFL*DSGPGN
Trigger: ATTCCCAGGGCCAGAATCTCACAAGAAGATCCTCTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCTAACGCTGATGAATaGACAAACCACTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPNADE*TNHCGK
Trigger: TTTCCCACAGTGGTTTGTTCATTCATCAGCGTTAGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGGGAGGGAAACAGACTaGGGGCCAGAATCATTGTGT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNGRETD*GPESLC
Trigger: ACACAATGATTCTGGCCCTCAGTCTGTTTCCCTCCC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCCTCAAACTACCACGTaGGTGTCTAGCGACGTGCAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNPQTTT*VSSDVQ
Trigger: TTGCACGTCGCTAGACACTCACGTGGTAGTTTGAGG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATACAAAGGCAGAGCTaGGTAATGTTGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIQRQS*VMLTGN
Trigger: GTTCCCTGTCAACATTACTCAGCTCTGCCTTTGTAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGAGCTCATATTTCTTaGGACTCTCAAGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRAHIS*DSQVLC
Trigger: GCAGAGCACTTGAGAGTCTCAAGAAATATGAGCTCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTTCCTGCCGGATGTTaGTGCTCCCGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVPAGC*CSRQRP
Trigger: AGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGAAAGAGAACCCGGATTaGTGGGTTGGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRKENPD*WVGQLK
Trigger: TTTCAGCTGCCCAACCCAGCAATCCGGGTTCTCTTT...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCACTTGGCCCGGCCCATaGCCCAAGCCCAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFTWPGP*PKPSPP
Trigger: GGGTGGGCTGGGCTTGGGGCATGGGCCGGGCCAAGT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEDFPIP*SARTHP
Trigger: AGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTTGGAAAGAGATGCTaGATCTCGTCTGCTACCAAG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFGKRC*ISSATK
Trigger: CTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGCCAGAGCCAAGCTCTaGAGACTGGTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAARAKL*RLVGLG
Trigger: TCCCAAGCCCACCAGTCTGCAGAGCTTGGCTCTGGC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGGAAGAAATTCTCACTaGTTGGTGGGAACTTTCACA +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACGRNSH*LVGTFT
Trigger: TGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAACCGATACCATCTGGTaGCAACGTACTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAETDTIW*QRTLCN
Trigger: ATTACACAGAGTACGTTGCCACCAGATGGTATCGGT...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGGGTTTTGGTGTGCAGTaGACTAAGACTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALGFGVQ*TKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACC...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGACTCTGCTTTTCATTaGGCTGCAGTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQDSAFH*AAVSQL
Trigger: AAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTC...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGACTCTGCTTTTCATTaGGCTGCAGTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRDSAFH*AAVSQL
Trigger: AAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCATGGCTTTTGGCCTTaGTCCTGTAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSHGFWP*SCRRDS
Trigger: GGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATG...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTCGTGTCACTGTGTCTaGTGGGGGTTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDSCHCV*WGLGWW
Trigger: CCACCAGCCCAACCCCCACCAGACACAGTGACACGA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGCCATCATCAGAGTGTaGGTCATGATACACTCCACC +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPAIIRV*VMIHST
Trigger: GGTGGAGTGTATCATGACCCACACTCTGATGATGGC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGTCTGGACGTGGAGATaGCACTCTGTAAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRVWTWR*HSVKAT
Trigger: GGTAGCTTTTACAGAGTGCCATCTCCACGTCCAGAC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATGGAAAGAATTGTCTaGACGTGGAGATGGCACTCT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRMERIV*TWRWHS
Trigger: AGAGTGCCATCTCCACGTCCAGACAATTCTTTCCAT...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTATGGAAAGAATTGTCTaGACGTGGAGATGGCACTCT +
Preference number: 4 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCMERIV*TWRWHS
Trigger: AGAGTGCCATCTCCACGTCCAGACAATTCTTTCCAT...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRVFLSG*FQNCSL
Trigger: CAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGAC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTVFLSG*FQNCSL
Trigger: CAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGAC...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLGCLFE*LVPELL
Trigger: GAGCAGTTCTGGAACCAACCACTCAAAAAGACAACC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCAGGGCTGTCGGAATTaGGTACTGTTTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLQGCRN*VLFEIS
Trigger: AGAAATCTCAAACAGTACCCAATTCCGACAGCCCTG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623535.2
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTTAATGGCTGGCTTTaGGTCTGCAGATCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFNGWL*VCRSEI
Trigger: GATCTCAGATCTGCAGACCCAAAGCCAGCCATTAAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACGGAGTGTCGGGCACATaGAAGTGCCTCGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDGVSGT*KCLGPG
Trigger: TCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCC...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCCCGGATTGCTGGGTTaGGCAGCTGAAAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSPGLLG*AAESIS
Trigger: ACTGATGCTTTCAGCTGCCCAACCCAGCAATCCGGG...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGGGTGATTCAGGGCATTaGGACCAGCCGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGGDSGH*DQPQAC
Trigger: GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACC...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGGATCCATCTGACCTaGCAGCTGGAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRARIHLT*QLEGWP
Trigger: AGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGCAGGCCCAAGACAATaGAAACGAACAATAGGATTC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLAGPRQ*KRTIGF
Trigger: GAATCCTATTGTTCGTTTCCATTGTCTTGGGCCTGC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp TGCAATATTGCACACACCTTCATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGGCCCATGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CNIAHTFIKLKI*AHHLARPMPQA
Trigger: GGCTTGGGGCATGGGCCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTATGAAGGTGTGTGCAATATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTCTTTCCAAGGACTaGGGATGGTTAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPLLSKD*GWLTAG
Trigger: TCCAGCTGTTAACCATCCTCAGTCCTTGGAAAGAAG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLLLDLW*DCKAVL
Trigger: AAGTACTGCTTTGCAGTCTCACCACAGATCTAACAG...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATTGTCCCTGGGCCTTCTaGAGGCTTTGGGTCAATATT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDCPWAF*RLWVNI
Trigger: AATATTGACCCAAAGCCTTCAGAAGGCCCAGGGACA...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNICCLT*GTLSLG
Trigger: GCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGAT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTACATAGAATGCCTATaGGGACGTTGCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAYIECL*GRCWEE
Trigger: TTCTTCCCAGCAACGTCCTCATAGGCATTCTATGTA...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTCTCCAGGCTGGGGTaGCAAGAGTTGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFSRLG*QELQAV
Trigger: AACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSLWRSL*PKILPQ
Trigger: CTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAG...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTCAGAGTGTGGGTCATaGTACACTCCACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSSECGS*YTPPSD
Trigger: GTCTGAGGGTGGAGTGTATCATGACCCACACTCTGA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGAGTGCTAGCAGAATaGATGGATTTCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQGVLAE*MDFCNV
Trigger: GACGTTGCAGAAATCCATTCATTCTGCTAGCACTCC...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTTGGGTCTGCAGATCTaGGATCTTCTCGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDLGLQI*DLLGAP
Trigger: TGGCGCCCCGAGAAGATCTCAGATCTGCAGACCCAA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCTGAGGAAGCCGGGTaGTTTGAGGCCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSSEEAG*FEAEER
Trigger: TCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGCTGGAGATTGGACGATaGAGGGCTCGGTTTGGGACG +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGLEIGR*RARFGT
Trigger: CGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAG...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCGTAACAGGTGTGCATaGAAATCTTGTCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRNRCA*KSCHKW
Trigger: CCACTTATGACAAGATTTTCATGCACACCTGTTACG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGGACATGGATGTCATaGATTCCCCTTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRTWMS*IPLPKE
Trigger: TTCTTTAGGAAGGGGAATTCATGACATCCATGTCCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCAACCTTACAGGGCTaGTACGAAGATCAAATAGGC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEPTLQG*YEDQIG
Trigger: GCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAAAGAGGGATTTCTTaGTGCTTGGATTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEERGIS*CLDSPR
Trigger: ACGGGGAGAATCCAAGCATCAAGAAATCCCTCTTTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS-3UTR GCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATCCACAATGTTTTCCTaGTTGAGAGTCCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAESTMFS*LRVRSI
Trigger: AATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGA...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATCCACAATGTTTTCCTaGTTGAGAGTCCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRSTMFS*LRVRSI
Trigger: AATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCTGCCGGATGTTGCTaGTCCCGCCAGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPAGCC*SRQRPG
Trigger: GCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTAGGLA*PSVRVP
Trigger: AGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGAGGAGACGACCATGTaGTCGCCTGTTGGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQEETTM*SPVGEY
Trigger: GTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGCATAGAGATGGTTTaGAAGATCTGCAGACAGGTA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSIEMV*KICRQV
Trigger: TACCTGTCTGCAGATCTTGCAAACCATCTCTATGCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTGATGGGGGTTGTGTaGGTAACAGGTGTGCATGAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLMGVV*VTGVHE
Trigger: TTCATGCACACCTGTTACGCACACAACCCCCATCAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCACGAAGGACCACAGTaGTCAAGATTGGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSHEGPQ*SRLGRP
Trigger: AGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAGTGTCTAGCGACGTaGAAAGGTGACAACACTCAA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEECLAT*KGDNTQ
Trigger: TTGAGTGTTGTCACCTTTGCACGTCGCTAGACACTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCTGGGCTTTTAAGCTaGATCCCCAGAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPGLLS*IPRGPP
Trigger: TGGAGGTCCTCTGGGGATGCAGCTTAAAAGCCCAGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCGTCCAGGTGGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASSRWE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCCACCTGGACGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCAGAGCCCAGAAGATTaGACCCCTAAAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNQSPED*TPKVTL
Trigger: AAGGGTCACTTTAGGGGTGCAATCTTCTGGGCTCTG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACCTAGACATCCCCAGGTaGTGCATCAAGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHLDIPR*CIKEGD
Trigger: GTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAG...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGGAAGAAATTCTCACTaGTTGGTGGGAACTTTCACA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLGRNSH*LVGTFT
Trigger: TGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTCCTACACTCAGGTTCTaGATGTCCTTGCTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAPTLRF*MSLLLD
Trigger: ATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGG...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGACTCTGCTTTTCATTaGGCTGCAGTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNDSAFH*AAVSQL
Trigger: AAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCACTCAGTGCCCCATaGCTTTTGGCCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSSLSAP*LLALVL
Trigger: CAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTACCTACTGGTACTaGGCTCCGCAATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTSTYWY*APQFGP
Trigger: GGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCATGGGAAGTACCTACTaGTACTGGGCTCCGCAATTT +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRMGSTY*YWAPQF
Trigger: AAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCAT...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATGGGAAGTACCTACTaGTACTGGGCTCCGCAATTT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEMGSTY*YWAPQF
Trigger: AAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTGGTGGGGGTTGGGCTaGTGGGAGAATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSWWGLG*WENSSL
Trigger: TAGACTTGAATTCTCCCACCAGCCCAACCCCCACCA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACGTGTCTGGTGGGGGTTaGGCTGGTGGGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHVSGGG*AGGRIQ
Trigger: TTGAATTCTCCCACCAGCCCAACCCCCACCAGACAC...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCGTGTCACTGTGTCTaGTGGGGGTTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSCHCV*WGLGWW
Trigger: CCACCAGCCCAACCCCCACCAGACACAGTGACACGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCGTGTCACTGTGTCTaGTGGGGGTTGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRSCHCV*WGLGWW
Trigger: CCACCAGCCCAACCCCCACCAGACACAGTGACACGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTTCCATCCAAGCCCTTaGCTCTCACTTTGTCACGGG +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSFHPSP*LSLCHG
Trigger: CCCGTGACAAAGTGAGAGCCAAGGGCTTGGATGGAA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQALWSAA*SASRMN
Trigger: ATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAG...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTTTAATGGCTGGCTTTaGGTCTGCAGATCTGAGATC +
Preference number: 4 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLFNGWL*VCRSEI
Trigger: GATCTCAGATCTGCAGACCCAAAGCCAGCCATTAAA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPSVRLL*VTTAEV
Trigger: TACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACT...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGAGAACCCGGATTGCTaGGTTGGGCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQENPDC*VGQLKA
Trigger: TGCTTTCAGCTGCCCAACCCAGCAATCCGGGTTCTC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTATAGGGGTGCCCATTTaGCCCACTTTTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSIGVPI*PTFGTQ
Trigger: CTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTAT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGCCAGGACACATCCTaGCATTCCCAAGTTCAACAG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNCQDTS*HSQVQQ
Trigger: CTGTTGAACTTGGGAATGCCAGGATGTGTCCTGGCA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCTAGAGGCTACTGCTaGGGCCTCAAAGTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSRGYC*GLKVEQ
Trigger: TTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGCAGACTGGTGGGCTTaGGATGGTGTAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIADWWA*DGVGQG
Trigger: ACCCTGCCCTACACCATCCCAAGCCCACCAGTCTGC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAAATACACGGAAAGGTaGGGTCAGTGCCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSKYTER*GQCPER
Trigger: CCTCTCCGGGCACTGACCCCACCTTTCCGTGTATTT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATAAAGCAAAACACTTaGGCATTGTGCCTGGCCATA +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIKQNT*ALCLAI
Trigger: TATGGCCAGGCACAATGCCCAAGTGTTTTGCTTTAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGGGGTTTCTCTATATTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNGVSLY*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAATATAGAGAAACCCC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGATTCTCCCCGTTGGTaGAATCTGTTGTTTGAGATT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLDSPRW*NLLFEI
Trigger: AATCTCAAACAACAGATTCCACCAACGGGGAGAATC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674046.1
3UTR CAA 72 bp GGATCATGTCTAGAGGCTACTGCTGGGGCCTCAAAGTaGAGCAAGGTTCATACTGTTACAGTCACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSCLEATAGASK*SKVHTVTVTCS
Trigger: GCTACACGTGACTGTAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACATGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTAGATCCAAAACCGTCTaGAGGAAGAAATTCTCACTG +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQARSKTV*RKKFSL
Trigger: CAGTGAGAATTTCTTCCTTCAGACGGTTTTGGATCT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTGACAAACTCCTCTTTTaGTGCAAGCCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQADKLLF*CKPQNM
Trigger: CATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTC...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTGGACATCATTGTGGCTaGTTAAGAGATTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VYCAARHPQVLHQGGRLTGHHCG*LRDFLV
Trigger: AACCAGAAAATCTCTTAATCAGCCACAATGATGTCC...AGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQELLDLW*DCKAVL
Trigger: AAGTACTGCTTTGCAGTCTCACCACAGATCTAACAG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTGAGATCTGCTGTTTaGCTTGAGGTACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLRSAV*LEVLCP
Trigger: GGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQVRCRQ*MGMATV
Trigger: GACAGTAGCCATTCCCATTCACTGTCTGCACCTCAC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCAGAGTGTGGGTCATaGTACACTCCACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSSECGS*YTPPSD
Trigger: GTCTGAGGGTGGAGTGTATCATGACCCACACTCTGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGTGCTGGTTGTCTTTTTaGGTGGTTGGTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPCWLSF*VVGSRT
Trigger: AGTTCTGGAACCAACCACTCAAAAAGACAACCAGCA...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGTCTGAGGAAGCCGGGTaGTTTGAGGCCGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGSEEAG*FEAEER
Trigger: TCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGA...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGGGAGGATAACACTTaGTGGCCAAAGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNWEDNT*WPKGLM
Trigger: CATCAAACCCTTTGGCCATCAAGTGTTATCCTCCCA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAACCAGCCCCTAGGTaGCGAGCCTCGAATGCCACA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKPAPR*RASNAT
Trigger: TGTGGCATTCGAGGCTCGTCACCTAGGGGCTGGTTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGCCACGGATGCCTTTaGGCAGTTGGTAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESHGCL*AVGKNH
Trigger: ATGATTTTTACCAACTGCTCAAAGGCATCCGTGGCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAAACTCTACAGAGTTTaGACCGGAGCTTTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLKLYRV*TGAFDN
Trigger: ATTGTCAAAAGCTCCGGTTCAAACTCTGTAGAGTTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATACAAAGGCAGAGCTaGGTAATGTTGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEIQRQS*VMLTGN
Trigger: GTTCCCTGTCAACATTACTCAGCTCTGCCTTTGTAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGAGCTCATATTTCTTaGGACTCTCAAGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERAHIS*DSQVLC
Trigger: GCAGAGCACTTGAGAGTCTCAAGAAATATGAGCTCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACATAGAGATGCTGCTGTaGATCCATTCTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNIEMLL*IHSQSP
Trigger: TGGGCTCTGAGAATGGATTCACAGCAGCATCTCTAT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGATGGGAGAATGGCTTaGGCCCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVDGRMA*AQEVKA
Trigger: AGCCTTGACCTCCTGGGCTCAAGCCATTCTCCCATC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCCCCTCCGACGAAATaGTTCCTTCAACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSPPTK*FLQLHN
Trigger: ATTGTGGAGTTGAAGGAAGCATTTCGTCGGAGGGGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATTCCCCTCCGACGAAATaGTTCCTTCAACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDSPPTK*FLQLHN
Trigger: ATTGTGGAGTTGAAGGAAGCATTTCGTCGGAGGGGA...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATTGCTTTTCATTGGGCTaGAGTGTCCCAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDCFSLG*SVPALL
Trigger: AAGCAAAGCTGGGACACTGCAGCCCAATGAAAAGCA...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACCTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHLGVTQ*PMAFGL
Trigger: AAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAG...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCATCCCTTGCCCTATaGTCAAGCTTCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPSLAL*SSFHPS
Trigger: GCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSLAAIP*PMLKLP
Trigger: TGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHLAAIP*PMLKLP
Trigger: TGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAG...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGCTGTTGGCTCTAGCTaGCATCCCTTGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAAVGSS*HPLPYA
Trigger: AGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNFDRRS*HSHLWR
Trigger: CCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDFDRRS*HSHLWR
Trigger: CCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAA...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCGACCTGAAAAATCCTTaGTTCTCTTTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: WFFHERGDSGHWDQPQACDLKNP*FSFSLS
Trigger: ACTCAAGGAAAAAGAGAAGCAAGGATTTTTCAGGTC...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTGACGAGCCTCGAATaGCACAGCATGGCAACGGGA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVTSLE*HSMATG
Trigger: TCCCGTTGCCATGCTGTGGCATTCGAGGCTCGTCAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGGAAAACCTAAGCCGTaGTGGAGAACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEGKPKP*WRTYLH
Trigger: GTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGCATCTAAAGGGCTGTaGGGACACCTACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSASKGL*GHLLSS
Trigger: AGAGCTCAGTAGGTGTCCGCACAGCCCTTTAGATGC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAATTCTCACTGGTTGGTaGGAACTTTCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAILTGW*ELSHIC
Trigger: ACAAATATGTGAAAGTTCCCACCAACCAGTGAGAAT...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCACCGATACCATCTGGTaGCAACGTACTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRTDTIW*QRTLCN
Trigger: ATTACACAGAGTACGTTGCCACCAGATGGTATCGGT...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCGGGACCGATACCATCTaGTGGCAACGTACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTGTDTI*WQRTLC
Trigger: ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCC...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGGGACCGATACCATCTaGTGGCAACGTACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQGTDTI*WQRTLC
Trigger: ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGGGACCGATACCATCTaGTGGCAACGTACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSGTDTI*WQRTLC
Trigger: ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGTGCCCCATGGCTTTTaGCCTTGGTCCTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRVPHGF*PWSCRR
Trigger: CCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCAC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCACTCAGTGCCCCATaGCTTTTGGCCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASLSAP*LLALVL
Trigger: CAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGGTTGCTCACAGACTTaGAGTCACTCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQGCSQT*SHSVPH
Trigger: ATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGTTGCTCACAGACTTaGAGTCACTCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGCSQT*SHSVPH
Trigger: ATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTGGGGGTTGGGCTGGTaGGAGAATTCAAGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASWGLGW*ENSSLS
Trigger: GCTTAGACTTGAATTCTCCCACCAGCCCAACCCCCA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCTTCCATCCAAGCCCTTaGCTCTCACTTTGTCACGGG +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTFHPSP*LSLCHG
Trigger: CCCGTGACAAAGTGAGAGCCAAGGGCTTGGATGGAA...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCACCCTCAGACTTCTaGCGTGTATGGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSPPSDF*RVWKEE
Trigger: CTCTTCCTTCCATACACGCCAGAAGTCTGAGGGTGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCACCCTCAGACTTCTaGCGTGTATGGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPPSDF*RVWKEE
Trigger: CTCTTCCTTCCATACACGCCAGAAGTCTGAGGGTGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGATGGAAAGAATTGTCTaGACGTGGAGATGGCACTCT +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQMERIV*TWRWHS
Trigger: AGAGTGCCATCTCCACGTCCAGACAATTCTTTCCAT...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATGGAAAGAATTGTCTaGACGTGGAGATGGCACTCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEMERIV*TWRWHS
Trigger: AGAGTGCCATCTCCACGTCCAGACAATTCTTTCCAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRGCLFE*LVPELL
Trigger: GAGCAGTTCTGGAACCAACCACTCAAAAAGACAACC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTCAGGACTTTTCCATaGATCGAATGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAFRTFP*IECWLS
Trigger: AGACAACCAGCATTCGATCCATGGAAAAGTCCTGAA...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGCTGTCGGAATTaGGTACTGTTTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPQGCRN*VLFEIS
Trigger: AGAAATCTCAAACAGTACCCAATTCCGACAGCCCTG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCCCGGATTGCTGGGTTaGGCAGCTGAAAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDPGLLG*AAESIS
Trigger: ACTGATGCTTTCAGCTGCCCAACCCAGCAATCCGGG...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAAGACCTGTGGGGAGTaGCGATCCCTAAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAKTCGE*RSLRNS
Trigger: GGAGTTCCTTAGGGATCGCCACTCCCCACAGGTCTT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCATCAAGCAGCTGCCTaGAAAAGCCAGAATTCAGAG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNHQAAA*KSQNSE
Trigger: CTCTGAATTCTGGCTTTTCCAGGCAGCTGCTTGATG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTGCAGTACTGTAGCCTaGACAGAACAAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASCSTVA*TEQGQS
Trigger: GCTCTGGCCTTGTTCTGTCCAGGCTACAGTACTGCA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTGCAGTACTGTAGCCTaGACAGAACAAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSCSTVA*TEQGQS
Trigger: GCTCTGGCCTTGTTCTGTCCAGGCTACAGTACTGCA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTTCTTGTGAGATTCTaGCCCTGGGAATTAGCGACA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLLVRF*PWELAT
Trigger: TGTCGCTAATTCCCAGGGCCAGAATCTCACAAGAAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAAGATTGGGACGGCCTaGCAGTCACATCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSKIGTA*QSHQSV
Trigger: CACTGACTGATGTGACTGCCAGGCCGTCCCAATCTT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGTGAGCCACCACACCTaGCCTGATCCTGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAVSHHT*PDPGLL
Trigger: TAAAAGCCCAGGATCAGGCCAGGTGTGGTGGCTCAC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTGTCCACTTGGGGCTTaGTTGCTAAGGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRACPLGA*LLRPTD
Trigger: GTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGGACA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGCTGAACGATGAAAGATaGCTCAATCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALLNDER*LNLLFL
Trigger: GAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAG...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACCTTCAATTCCTAACATaGGCTCACAGTGGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHLQFLT*AHSGPP
Trigger: GGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAG...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CAA 72 bp CAAATCCTGGCCCTGCCACTTCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGTATGGAAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QILALPLPNWVT*GRLMSSMEICF
Trigger: GAAACAGATTTCCATACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGGAAGTGGCAGGGCCAGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGACAAACTCCTCTTTTaGTGCAAGCCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRDKLLF*CKPQNM
Trigger: CATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGAGCATTATTGCCTTCTaGCAGATTACGAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPSIIAF*QITSKT
Trigger: GGTTTTGCTCGTAATCTGTCAGAAGGCAATAATGCT...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGCATTATTGCCTTCTaGCAGATTACGAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESIIAF*QITSKT
Trigger: GGTTTTGCTCGTAATCTGTCAGAAGGCAATAATGCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPGPSTF*IVKSWS
Trigger: TGACCAACTTTTTACTATTCAGAAGGTGCTAGGACC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEGPSTF*IVKSWS
Trigger: TGACCAACTTTTTACTATTCAGAAGGTGCTAGGACC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCGTCCCAGCTTTGCTTTaGGAGCTTTCCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSVPALL*ELSMNE
Trigger: CTCATTCATGGAAAGCTCTCAAAGCAAAGCTGGGAC...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTCTTCCAGAAGGGCTaGGCAAAGTTCTCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFFQKG*AKFSCH
Trigger: GTGACACGAGAACTTTGCTCAGCCCTTCTGGAAGAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGTTGTGGTTCGACGTaGGTCCAGCGTTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGCGST*VQRSLI
Trigger: AATGAGGGAACGCTGGACTCACGTCGAACCACAACC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCTCCAGGCTGGGGTaGCAAGAGTTGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFSRLG*QELQAV
Trigger: AACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGCTGGTTGTCTTTTTaGGTGGTTGGTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNCWLSF*VVGSRT
Trigger: AGTTCTGGAACCAACCACTCAAAAAGACAACCAGCA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATTGCTGGTTGTCTTTTTaGGTGGTTGGTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDCWLSF*VVGSRT
Trigger: AGTTCTGGAACCAACCACTCAAAAAGACAACCAGCA...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATTCCTTGAGTTGCTCTaGATGACTAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEFLELL*MTNIFR
Trigger: CCTGAAAATATTAGTCATTCAGAGCAACTCAAGGAA...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTGGGTCTGCAGATCTaGGATCTTCTCGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLGLQI*DLLGAP
Trigger: TGGCGCCCCGAGAAGATCTCAGATCTGCAGACCCAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGTGAATCCGAATTTCTaGGAAGGAATTTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLVNPNF*EGIFGL
Trigger: CAAACCAAAAATTCCTTCTCAGAAATTCGGATTCAC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGCCTGGCTCAGGGGGTaGATCCGAATTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHAWLRG*IRISEK
Trigger: CTTCTCAGAAATTCGGATTCACCCCCTGAGCCAGGC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAAACCAGCCCCTAGGTaGCGAGCCTCGAATGCCACA +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISKPAPR*RASNAT
Trigger: TGTGGCATTCGAGGCTCGTCACCTAGGGGCTGGTTT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGTTCTGCAAACATCTaGGATCCCAGTGTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNCSANI*DPSVSK
Trigger: CTTGCTAACACTGGGATCTCAGATGTTTGCAGAACA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGCCATTGCCCTTGCTaGAAGAGTTCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASHCPC*KSSVTT
Trigger: GGTGGTGACTGAACTCTTTCAGCAAGGGCAATGGCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGTAACTGGCTCACATaGAGGCCTACCATTTGTATC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSNWLT*RPTICI
Trigger: GATACAAATGGTAGGCCTTCATGTGAGCCAGTTACT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAACCAAAGGAAGTCCTaGGGAATTCTTAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNNQRKS*GILSSL
Trigger: CAGACTGCTAAGAATTCCTCAGGACTTCCTTTGGTT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCACCCTTTCCTTCACTTaGCTAAGTTGTCTTTATTTC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLTLSFT*LSCLYF
Trigger: GAAATAAAGACAACTTAGTCAAGTGAAGGAAAGGGT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTCCTTCTCAATTTCCTaGAACTGCCAAATTGGGACA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESFSIS*NCQIGT
Trigger: TGTCCCAATTTGGCAGTTTCAGGAAATTGAGAAGGA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTGTGCGGACACCTACTaGGCTCTGTGTAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRACADTY*ALCNWH
Trigger: ATGCCAGTTACACAGAGCTCAGTAGGTGTCCGCACA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATAAAGGTATGAAGGTCTaGGAAGGGGCCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDKGMKV*EGAILL
Trigger: AAGAAGAATGGCCCCTTCTCAGACCTTCATACCTTT...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIPRLAA*LVGFGV
Trigger: CACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRPRLAA*LVGFGV
Trigger: CACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDLGVTQ*PMAFGL
Trigger: AAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAG...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALGVTQ*PMAFGL
Trigger: AAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCCATCCCTTGCCCTATaGTCAAGCTTCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAPSLAL*SSFHPS
Trigger: GCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSFDRRS*HSHLWR
Trigger: CCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAA...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGACCTGAAAAATCCTTaGTTCTCTTTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FFHERGDSGHWDQPQACRDLKNP*FSFSLS
Trigger: ACTCAAGGAAAAAGAGAAGCAAGGATTTTTCAGGTC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGTTCCTGCCGGATGTTaGTGCTCCCGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQVPAGC*CSRQRP
Trigger: AGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAAC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTTCCTGCCGGATGTTaGTGCTCCCGCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVPAGC*CSRQRP
Trigger: AGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGTTCGGTGCGGGTTCCTaGCGGATGTTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQFGAGS*RMLLLP
Trigger: CGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAA...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTTCGGTGCGGGTTCCTaGCGGATGTTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFFGAGS*RMLLLP
Trigger: CGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTCACTTGCCCGTCAGTaGCGCATTCTCATGGTATGT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQSLARQ*RILMVC
Trigger: ACATACCATGAGAATGCGGCACTGACGGGCAAGTGA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGCTTGCAGAAGTCACTTaGCCGTCAGTGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGLAEVT*PSVPHS
Trigger: AGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAG...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASMSRGY*WGLKVE
Trigger: CTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEMVCKI*RQVPLM
Trigger: CATAAGAGGTACCTGTCTGCAGATCTTGCAAACCAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGCATAGAGATGGTTTaGAAGATCTGCAGACAGGTA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESIEMV*KICRQV
Trigger: TACCTGTCTGCAGATCTTGCAAACCATCTCTATGCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAAAATCATGCCAATCTaGCAGGCTGTTGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNKIMPI*QAVACF
Trigger: GAAGCAAGCAACAGCCTGGCAGATTGGCATGATTTT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCACGAAGGACCACAGTaGTCAAGATTGGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHHEGPQ*SRLGRP
Trigger: AGGCCGTCCCAATCTTGAGCACTGTGGTCCTTCGTG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATTATCCCAAGTGGCTaGATCATTTTACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIIPSG*IILHFH
Trigger: GTGGAAATGTAAAATGATGCAGCCACTTGGGATAAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCGTAAGACCTTGGGTCTaGAGATCTGAGATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFVRPWV*RSEIFS
Trigger: CGAGAAGATCTCAGATCTGCAGACCCAAGGTCTTAC...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGAAATTCTCACTGGTTaGTGGGAACTTTCACATATT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLEILTG*WELSHI
Trigger: AATATGTGAAAGTTCCCACCAACCAGTGAGAATTTC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCAAGCCACAAAACATaGCACCAAAAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQASHKT*HQKNFS
Trigger: TGAGAAGTTCTTTTGGTGCCATGTTTTGTGGCTTGC...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGGATGGTTAACAGCTaGAAACCGGAGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSRMVNS*KPEPME
Trigger: TTCCATGGGCTCCGGTTTCCAGCTGTTAACCATCCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAGGATGGTTAACAGCTaGAAACCGGAGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASRMVNS*KPEPME
Trigger: TTCCATGGGCTCCGGTTTCCAGCTGTTAACCATCCT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCATGGCTTTTGGCCTTaGTCCTGTAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIHGFWP*SCRRDS
Trigger: GGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCATGGCTTTTGGCCTTaGTCCTGTAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRHGFWP*SCRRDS
Trigger: GGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAAGTACCTACTGGTACTaGGCTCCGCAATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVSTYWY*APQFGP
Trigger: GGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGTACCTACTGGTACTaGGCTCCGCAATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSTYWY*APQFGP
Trigger: GGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTGTCTGGTGGGGGTTaGGCTGGTGGGAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVSGGG*AGGRIQ
Trigger: TTGAATTCTCCCACCAGCCCAACCCCCACCAGACAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAGCTGTTCTCCAGGCTaGGGTGACAAGAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRSCSPG*GDKSCR
Trigger: CCTGCAACTCTTGTCACCCCAGCCTGGAGAACAGCT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGCCATCATCAGAGTGTaGGTCATGATACACTCCACC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASAIIRV*VMIHST
Trigger: GGTGGAGTGTATCATGACCCACACTCTGATGATGGC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGAGAATTGTCTGGACGTaGAGATGGCACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRRIVWT*RWHSVK
Trigger: TTTTACAGAGTGCCATCTCCACGTCCAGACAATTCT...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGAATTGTCTGGACGTaGAGATGGCACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERIVWT*RWHSVK
Trigger: TTTTACAGAGTGCCATCTCCACGTCCAGACAATTCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACAGCAGGACTGGAGATTaGACGATGAAGGGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDSRTGD*TMKGSV
Trigger: AACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCT...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCATTTGGCCCACTTTTaGCACCCAGCTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASHLAHF*HPAVQS
Trigger: ACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATAGGGGTGCCCATTTaGCCCACTTTTGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRIGVPI*PTFGTQ
Trigger: CTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTTCCCCTGCAGGTTTaGAAAGAGATGCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLPLQV*KEMLHL
Trigger: GAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGGAAACCAGGCCTGCTaGAATTCTCACTGGCCTATC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAGNQAC*NSHWPI
Trigger: GATAGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGGACCACTGTTTGTTTaGGGGGCTGTCCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIGPLFV*GAVLCM
Trigger: CATGCACAGGACAGCCCCCCAAACAAACAGTGGTCC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGCTCTGCAGACTGGTaGGCTTGGGATGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSSADW*AWDGVG
Trigger: CCCTACACCATCCCAAGCCCACCAGTCTGCAGAGCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAAATACACGGAAAGGTaGGGTCAGTGCCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRKYTER*GQCPER
Trigger: CCTCTCCGGGCACTGACCCCACCTTTCCGTGTATTT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCACAGTGCTCAAGATTaGGACGGCCTGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRHSAQD*DGLAVT
Trigger: TGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCACTTAGCACAAGATTaGCCTCTCTTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASHLAQD*PLFPSS
Trigger: GGAGGATGGGAAGAGAGGCCAATCTTGTGCTAAGTG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATAAAGCAAAACACTTaGGCATTGTGCCTGGCCATA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEIKQNT*ALCLAI
Trigger: TATGGCCAGGCACAATGCCCAAGTGTTTTGCTTTAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTGCCACTTCCAAACTaGGTGACCTTGGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALPLPN*VTLGRL
Trigger: TAACCTGCCCAAGGTCACCCAGTTTGGAAGTGGCAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTGTCCACTTGGGGCTTaGTTGCTAAGGCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRCPLGA*LLRPTD
Trigger: GTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGGACA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTCGGGTACTCTGTGTaGGAGGAGGTTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFGYSV*EEVTWT
Trigger: TGTCCAAGTAACCTCCTCCCACACAGAGTACCCGAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCAAAACTGGCCATGTATaGTGGCGTGTGCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFKTGHV*WRVPVV
Trigger: AACTACAGGCACACGCCACCATACATGGCCAGTTTT...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGGGACATCATTGTGGCTaGTTAAGAGATTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRGHHCG*LRDFLV
Trigger: AACCAGAAAATCTCTTAATCAGCCACAATGATGTCC...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGCATTATTGCCTTCTaGCAGATTACGAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSIIAF*QITSKT
Trigger: GGTTTTGCTCGTAATCTGTCAGAAGGCAATAATGCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCTTCTTTCCAAGGACTaGGGATGGTTAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSLLSKD*GWLTAG
Trigger: TCCAGCTGTTAACCATCCTCAGTCCTTGGAAAGAAG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDICCLT*GTLSLG
Trigger: GCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGAT...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCGAGTGGCGGTTCTGCTaGGATCTGCTGTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGEWRFC*DLLFDL
Trigger: CAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTC...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTTTGAGAGCTTTCCATaGATGAGTGGCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQFESFP*MSGGSA
Trigger: AGCAGAACCGCCACTCATTCATGGAAAGCTCTCAAA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTTGAGAGCTTTCCATaGATGAGTGGCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSFESFP*MSGGSA
Trigger: AGCAGAACCGCCACTCATTCATGGAAAGCTCTCAAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGTTCTTCCAGAAGGGCTaGGCAAAGTTCTCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGFFQKG*AKFSCH
Trigger: GTGACACGAGAACTTTGCTCAGCCCTTCTGGAAGAA...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRVRCRQ*MGMATV
Trigger: GACAGTAGCCATTCCCATTCACTGTCTGCACCTCAC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLWRSL*PKILPQ
Trigger: CTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCTCACTGGCCTATCTaGCTTTCTTCCCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISHWPI*LSSPAG
Trigger: ACCTGCAGGGGAAGAAAGTCAGATAGGCCAGTGAGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCGTAACAGGTGTGCATaGAAATCTTGTCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRNRCA*KSCHKW
Trigger: CCACTTATGACAAGATTTTCATGCACACCTGTTACG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTGAAAGAGATCAGATaGGGGGAAGATAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLKEIR*GEDRSC
Trigger: ACAGGACCTATCTTCCCCTCATCTGATCTCTTTCAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTGGGAGGATAACACTTaGTGGCCAAAGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASWEDNT*WPKGLM
Trigger: CATCAAACCCTTTGGCCATCAAGTGTTATCCTCCCA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCCAGGCAAAACTGCTaGTGGTCCACCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSSRQNC*WSTSFV
Trigger: TACAAATGAGGTGGACCATCAGCAGTTTTGCCTGGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGACATGGATGTCATaGATTCCCCTTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRTWMS*IPLPKE
Trigger: TTCTTTAGGAAGGGGAATTCATGACATCCATGTCCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGCGTGACTAGAGACTaGCAGCATAGCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGVTRD*QHSSEL
Trigger: AAGCTCAGAGCTATGCTGTCAGTCTCTAGTCACGCC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCATCATCCCTCATTTaGATTCGAATGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEPSSLI*IRMHSF
Trigger: GAAAGAATGCATTCGAATTCAAATGAGGGATGATGG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGCGACGTGCAAAGGTaGCAACACTCAAGTATAAAA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSDVQR*QHSSIK
Trigger: TTTTATACTTGAGTGTTGTCACCTTTGCACGTCGCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAAGAATGGAGAGCACTaGCTTTCAGCTCCTACCCTT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASKNGEH*LSAPTL
Trigger: AAGGGTAGGAGCTGAAAGTCAGTGCTCTCCATTCTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCAGAGGACCTCCAGTaGCTTGTTTCAATGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPEDLQ*LVSMKC
Trigger: ACACTTCATTGAAACAAGTCACTGGAGGTCCTCTGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTGCTTCAAGTCACATaGGATGTAGGAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSLLQVT*DVGDGA
Trigger: GGCTCCATCTCCTACATCTCATGTGACTTGAAGCAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCAACCTTACAGGGCTaGTACGAAGATCAAATAGGC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPTLQG*YEDQIG
Trigger: GCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCTTTCCCCCATTGAATaGTCTTGGCACCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSLSPIE*SWHPCQ
Trigger: TTGACAAGGGTGCCAAGATCATTCAATGGGGGAAAG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCCACAATGTTTTCCTaGTTGAGAGTCCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSTMFS*LRVRSI
Trigger: AATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTCCCCTCCGACGAAATaGTTCCTTCAACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQSPPTK*FLQLHN
Trigger: ATTGTGGAGTTGAAGGAAGCATTTCGTCGGAGGGGA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTCCCCTCCGACGAAATaGTTCCTTCAACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASSPPTK*FLQLHN
Trigger: ATTGTGGAGTTGAAGGAAGCATTTCGTCGGAGGGGA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGTGCTTTTCATTGGGCTaGAGTGTCCCAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQCFSLG*SVPALL
Trigger: AAGCAAAGCTGGGACACTGCAGCCCAATGAAAAGCA...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTGCTTTTCATTGGGCTaGAGTGTCCCAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSCFSLG*SVPALL
Trigger: AAGCAAAGCTGGGACACTGCAGCCCAATGAAAAGCA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILGVTQ*PMAFGL
Trigger: AAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCCCATCCCTTGCCCTATaGTCAAGCTTCCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGPSLAL*SSFHPS
Trigger: GCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGG...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGCTGTTGGCTCTAGCTaGCATCCCTTGCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISAVGSS*HPLPYA
Trigger: AGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGAAAGAGAACCCGGATTaGTGGGTTGGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGKENPD*WVGQLK
Trigger: TTTCAGCTGCCCAACCCAGCAATCCGGGTTCTCTTT...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAACGGCCCCAACACATaGAATATTGCACACACCTTC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASNGPNT*NIAHTF
Trigger: GAAGGTGTGTGCAATATTGCATGTGTTGGGGCCGTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGACTTTCCTATCCCTTaGAGTGCCAGGACACATCCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRADFPIP*SARTHP
Trigger: AGGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTATCTATCTGGAATTaGTCCAGGAGCCTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLSIWN*SRSLLN
Trigger: ATTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCACTGCCGCAATTTTaGTGGCCCTACAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASLPQF*WPYKSS
Trigger: GCTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGCAACTTCTAATCTaGATACAACATGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRQLLI*IQHGDR
Trigger: TCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGCATCAATTACCATCTaGTGGGAAAGGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSASITI*WERGWK
Trigger: CTTCCATCCCCTTTCCCAGCAGATGGTAATTGATGC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGCTCACTGCAACCTCTaGCTTTTGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASAHCNL*LLGSSD
Trigger: ATCACTTGAACCCAAAAGGCAGAGGTTGCAGTGAGC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGTGATCTCGGCTCACTaGAACCTCTGCCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIVISAH*NLCLLG
Trigger: ACCCAAAAGGCAGAGGTTGCAGTGAGCCGAGATCAC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTGATCTCGGCTCACTaGAACCTCTGCCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVISAH*NLCLLG
Trigger: ACCCAAAAGGCAGAGGTTGCAGTGAGCCGAGATCAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCAAGAGTACTTCCATaGTGGGTCATTCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSPRVLP*WVILKP
Trigger: GGGCTTAAGAATGACCCAGCATGGAAGTACTCTTGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCAGAGCCCAGAAGATTaGACCCCTAAAGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAQSPED*TPKVTL
Trigger: AAGGGTCACTTTAGGGGTGCAATCTTCTGGGCTCTG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGGGACCGATACCATCTaGTGGCAACGTACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVGTDTI*WQRTLC
Trigger: ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGTACTTTTGCCGGCTTaGTTTCTATTAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEVLLPA*FLLDNV
Trigger: CACATTGTCTAATAGAAACCAAGCCGGCAAAAGTAC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCTTAGGAAGCTTTCATTaGCAGGGAGACCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTLGSFH*QGDLRQ
Trigger: CTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAA...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGTTGCTCACAGACTTaGAGTCACTCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGCSQT*SHSVPH
Trigger: ATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCATGGGAAGTACCTACTaGTACTGGGCTCCGCAATTT +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTMGSTY*YWAPQF
Trigger: AAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCAT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTGGGGGTTGGGCTGGTaGGAGAATTCAAGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIWGLGW*ENSSLS
Trigger: GCTTAGACTTGAATTCTCCCACCAGCCCAACCCCCA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGGAAGAAAAGGGGCTaGTGTAGCCCAGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGKKRG*CSPVHK
Trigger: CTTATGGACTGGGCTACACCAGCCCCTTTTCTTCCC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGGAAGAAAAGGGGCTaGTGTAGCCCAGTCCATAAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGKKRG*CSPVHK
Trigger: CTTATGGACTGGGCTACACCAGCCCCTTTTCTTCCC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTATTCCATCCAAGCCCTTaGCTCTCACTTTGTCACGGG +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVFHPSP*LSLCHG
Trigger: CCCGTGACAAAGTGAGAGCCAAGGGCTTGGATGGAA...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCCATCCAAGCCCTTaGCTCTCACTTTGTCACGGG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFHPSP*LSLCHG
Trigger: CCCGTGACAAAGTGAGAGCCAAGGGCTTGGATGGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGTCTGGACGTGGAGATaGCACTCTGTAAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAVWTWR*HSVKAT
Trigger: GGTAGCTTTTACAGAGTGCCATCTCCACGTCCAGAC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGACACATTATTTTCATaGAAAGAATTGTCTGGACGT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLDTLFS*KELSGR
Trigger: ACGTCCAGACAATTCTTTCCATGAAAATAATGTGTC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFLWSAA*SASRMN
Trigger: ATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAG...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTTCCCCTGCAGGTTTaGAAAGAGATGCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALPLQV*KEMLHL
Trigger: GAGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGAAACCAGGCCTGCTaGAATTCTCACTGGCCTATC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGNQAC*NSHWPI
Trigger: GATAGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCATCAAGCAGCTGCCTaGAAAAGCCAGAATTCAGAG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASHQAAA*KSQNSE
Trigger: CTCTGAATTCTGGCTTTTCCAGGCAGCTGCTTGATG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTACCTCGAAAACACTaGTTGAAAACATTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLPRKH*LKTFVD
Trigger: ATCTACAAATGTTTTCAACCAGTGTTTTCGAGGTAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGGAACATGCTAAACTaGCTAACTCTACAACCACAA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERNMLN*LTLQPQ
Trigger: TTGTGGTTGTAGAGTTAGCCAGTTTAGCATGTTCCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGCCGCAATTTTGCTaGCCCTACAAATCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLPQFC*PYKSSV
Trigger: CACGCTGGATTTGTAGGGCCAGCAAAATTGCGGCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTGCCGCAATTTTGCTaGCCCTACAAATCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLPQFC*PYKSSV
Trigger: CACGCTGGATTTGTAGGGCCAGCAAAATTGCGGCAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTCGGCTTCAAATCCTaGCCCTGCCACTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAFGFKS*PCHFQT
Trigger: AGTTTGGAAGTGGCAGGGCCAGGATTTGAAGCCGAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAGCACGGTCTACACTaGAGTTTGTTTAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEEHGLH*SLFKNC
Trigger: GCAATTTTTAAACAAACTCCAGTGTAGACCGTGCTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCATTCTTTTGCATGTaGATATCCAGTTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSFFCM*ISSCPT
Trigger: GGTGGGACAACTGGATATCCACATGCAAAAGAATGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTTTTCTCCCATTCTGTaGATCTTTTTAACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEFSPIL*IFLTLS
Trigger: CGAGAGGGTTAAAAAGATCCACAGAATGGGAGAAAA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTCTTGTTTAATCTTTaGAGGAACTATTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLLFNL*RNYYPK
Trigger: CTTGGGATAATAGTTCCTCCAAAGATTAAACAAGAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGATTTCTTGATGCTTaGATTCTCCCCGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGFLDA*ILPVGG
Trigger: TCCACCAACGGGGAGAATCCAAGCATCAAGAAATCC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674046.1
3UTR CAA 72 bp AGCTCACTTGAGCCCCTCAGCATGAAGCACTCCCTTTaGGTCTTGGGCTCTAGAAAGAGGCTAAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSLEPLSMKHSL*VLGSRKRLNFR
Trigger: TCTAAAATTTAGCCTCTTTCTAGAGCCCAAGACCAAAAGGGAGTGCTTCATGCTGAGGGGCTCAAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp GGCTTTAGAAGTGAAACTAGTTTCACTGCCGCAATTTaGCTGGCCCTACAAATCCAGCGTGCCGACTATTAC +
Preference number: 4 (lower is better)
Translates to: GFRSETSFTAAI*LALQIQRADYY
Trigger: GTAATAGTCGGCACGCTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAAACTAGTTTCACTTCTAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp GAGCTGATTCGGGTACTCTGTGTGGGAGGAGGTTACTaGGACAAAGCAAAGGTATTTCCAGATAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: ELIRVLCVGGGY*DKAKVFPDRDA
Trigger: AGCATCTCTATCTGGAAATACCTTTGCTTTGTCCAAGTAACCTCCTCCCACACAGAGTACCCGAATCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCTGTCCCTGGGCCTTCTaGAGGCTTTGGGTCAATATT +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGCPWAF*RLWVNI
Trigger: AATATTGACCCAAAGCCTTCAGAAGGCCCAGGGACA...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHICCLT*GTLSLG
Trigger: GCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTGAGATCTGCTGTTTaGCTTGAGGTACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALRSAV*LEVLCP
Trigger: GGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGAGTGGCGGTTCTGCTaGGATCTGCTGTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIEWRFC*DLLFDL
Trigger: CAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGAGTGGCGGTTCTGCTaGGATCTGCTGTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISEWRFC*DLLFDL
Trigger: CAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTTGAGAGCTTTCCATaGATGAGTGGCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAFESFP*MSGGSA
Trigger: AGCAGAACCGCCACTCATTCATGGAAAGCTCTCAAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGGTCCCAGCTTTGCTTTaGGAGCTTTCCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGVPALL*ELSMNE
Trigger: CTCATTCATGGAAAGCTCTCAAAGCAAAGCTGGGAC...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTACATAGAATGCCTATaGGGACGTTGCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASYIECL*GRCWEE
Trigger: TTCTTCCCAGCAACGTCCTCATAGGCATTCTATGTA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGILWRSL*PKILPQ
Trigger: CTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAG...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGTTCCTTGAGTTGCTCTaGATGACTAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEFLELL*MTNIFR
Trigger: CCTGAAAATATTAGTCATTCAGAGCAACTCAAGGAA...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGTGAATCCGAATTTCTaGGAAGGAATTTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRVNPNF*EGIFGL
Trigger: CAAACCAAAAATTCCTTCTCAGAAATTCGGATTCAC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCAGATTTGGCATTCGTaGGCGATTTGTTCTGTTATA +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNQIWHS*AICSVI
Trigger: TATAACAGAACAAATCGCTCACGAATGCCAAATCTG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAGAAGTTATCTCTTTaGGGGGTGGGAGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVREKLSL*GVGGTF
Trigger: AAAGGTCCCTCCCACCCCTCAAAGAGATAACTTCTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTGTTCTGCAAACATCTaGGATCCCAGTGTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSCSANI*DPSVSK
Trigger: CTTGCTAACACTGGGATCTCAGATGTTTGCAGAACA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAAGGTAGAAAAACAGTaGAGCAGAGTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEKVEKQ*SRVSFP
Trigger: TGGAAAAGAAACTCTGCTTCACTGTTTTTCTACCTT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCCACCAGGTCCCAGGTaGACAGAAATAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIPPGPR*TEIDRS
Trigger: AGATCTGTCTATTTCTGTTCACCTGGGACCTGGTGG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGAGAGGATCTTCTTGTaGGATTCTGGCCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHERIFL*DSGPGN
Trigger: ATTCCCAGGGCCAGAATCTCACAAGAAGATCCTCTC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGAATTTTTCATCAGCTaGACCAGACCTCAAGATATT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEEFFIS*TRPQDI
Trigger: AATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGGGAGGGAAACAGACTaGGGGCCAGAATCATTGTGT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISGRETD*GPESLC
Trigger: ACACAATGATTCTGGCCCTCAGTCTGTTTCCCTCCC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATGTTGACAGGGAACTaGTGGGCCACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTMLTGN*WATEPP
Trigger: TGGGGGCTCTGTGGCCCATCAGTTCCCTGTCAACAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGTGCGGACACCTACTaGGCTCTGTGTAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISCADTY*ALCNWH
Trigger: ATGCCAGTTACACAGAGCTCAGTAGGTGTCCGCACA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTTGCTAAGGCCCACTaGCAAACAGCTTACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVAKAH*QTAYKD
Trigger: GTCCTTGTAAGCTGTTTGTCAGTGGGCCTTAGCAAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTATTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVFLWGL*HHQSVG
Trigger: ACCCACACTCTGATGATGGCACAGCCCCCAAAGAAA...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGGTTGGTTCCAGAACTaGTCTCTGATGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAGWFQN*SLMVEK
Trigger: CTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQRDVTT*AVILMA
Trigger: AGCCATTAAAATCACTGCGCAAGTTGTTACATCTCT...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERDVTT*AVILMA
Trigger: AGCCATTAAAATCACTGCGCAAGTTGTTACATCTCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGTCTAGAGGCTACTaGTGGGGCCTCAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRMSRGY*WGLKVE
Trigger: CTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGACAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTATGCTGCATCTCGTCTaGTACCAAGGATCATGTCTA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSMLHLV*YQGSCL
Trigger: TAGACATGATCCTTGGTAGCAGACGAGATGCAGCAT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGCATCAATTACCATCTaGTGGGAAAGGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAASITI*WERGWK
Trigger: CTTCCATCCCCTTTCCCAGCAGATGGTAATTGATGC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGCTTACAAGGACTGTTaGTTCCCCTGTGGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISAYKDC*FPCGPK
Trigger: CTTGGGACCACAGGGGAAGCAACAGTCCTTGTAAGC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGACCCTTGGAATGGATaGTCACAGAACCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRADPWNG*SQNPIF
Trigger: AAAGATGGGGTTCTGTGAGCATCCATTCCAAGGGTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCCCAAAGAGAAATCCTaGACCCATCAGCCAACACTC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHPKEKS*THQPTL
Trigger: GAGTGTTGGCTGATGGGTGCAGGATTTCTCTTTGGG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCTACACTCAGGTTCTaGATGTCCTTGCTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPTLRF*MSLLLD
Trigger: ATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGTTTTGGTGTGCAGTaGACTAAGACTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGFGVQ*TKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGTTTTGGTGTGCAGTaGACTAAGACTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGFGVQ*TKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTGGGCTAAGAAGGTGTaGTATGTTGTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSWAKKV*YVVVGE
Trigger: CTCACCAACAACAACATACCACACCTTCTTAGCCCA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTTGGGGGTTGGGCTGGTaGGAGAATTCAAGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIWGLGW*ENSSLS
Trigger: GCTTAGACTTGAATTCTCCCACCAGCCCAACCCCCA...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGGTGGGGGTTGGGCTaGTGGGAGAATTCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISWWGLG*WENSSL
Trigger: TAGACTTGAATTCTCCCACCAGCCCAACCCCCACCA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCGCCATCATCAGAGTGTaGGTCATGATACACTCCACC +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGAIIRV*VMIHST
Trigger: GGTGGAGTGTATCATGACCCACACTCTGATGATGGC...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGCCATCATCAGAGTGTaGGTCATGATACACTCCACC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIAIIRV*VMIHST
Trigger: GGTGGAGTGTATCATGACCCACACTCTGATGATGGC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCAGAATTGTCTGGACGTaGAGATGGCACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSRIVWT*RWHSVK
Trigger: TTTTACAGAGTGCCATCTCCACGTCCAGACAATTCT...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTGCLFE*LVPELL
Trigger: GAGCAGTTCTGGAACCAACCACTCAAAAAGACAACC...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGCLFE*LVPELL
Trigger: GAGCAGTTCTGGAACCAACCACTCAAAAAGACAACC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTLWSAA*SASRMN
Trigger: ATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAG...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTCATTGGTGTTAATTaGTTCTTCCATGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRFIGVN*FFHERG
Trigger: ACCTCTCTCATGGAAGAACCAATTAACACCAATGAA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCATTTGGCCCACTTTTaGCACCCAGCTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRHLAHF*HPAVQS
Trigger: ACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTGCCAGGACACATCCTaGCATTCCCAAGTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHCQDTS*HSQVQQ
Trigger: CTGTTGAACTTGGGAATGCCAGGATGTGTCCTGGCA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCTAGAGGCTACTGCTaGGGCCTCAAAGTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRSRGYC*GLKVEQ
Trigger: TTGCTCAACTTTGAGGCCCCAGCAGTAGCCTCTAGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAESPGQ*TIFRSI
Trigger: TATGCTCCTGAATATTGTCCACTGTCCCGGAGACTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGTGAGATTCTGGCCCTaGGAATTAGCGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISVRFWP*ELATGH
Trigger: GTGTCCTGTCGCTAATTCCCAGGGCCAGAATCTCAC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGAACCAAGGATCAAATaGGGTTTCGAGAGCTTAACC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASEPRIK*GFESLT
Trigger: GGTTAAGCTCTCGAAACCCCATTTGATCCTTGGTTC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCGGCTTCAAATCCTaGCCCTGCCACTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFGFKS*PCHFQT
Trigger: AGTTTGGAAGTGGCAGGGCCAGGATTTGAAGCCGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACATATGTTATACATCGTaGGGACTTGTTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNICYTS*GLVTCS
Trigger: AGAGCAGGTAACAAGTCCCCACGATGTATAACATAT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGTTGCTTCCCCTGTaGTCCCAAGAGTACTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLLLPL*SQEYFH
Trigger: ATGGAAGTACTCTTGGGACCACAGGGGAAGCAACAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTCGGGTACTCTGTGTaGGAGGAGGTTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRFGYSV*EEVTWT
Trigger: TGTCCAAGTAACCTCCTCCCACACAGAGTACCCGAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGCTGGATTTGGCCACTTaGGCTACAACCCTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TLQDLKELGTETQGKWLQLDLAT*ATTLAL
Trigger: CAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAG...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
3UTR CAA 72 bp GGGACAGTGGACAATATTCAGGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGTACCTCTTATGATCTC +
Preference number: 4 (lower is better)
Translates to: GTVDNIQEHRDG*QDLQTGTSYDL
Trigger: GAGATCATAAGAGGTACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTCCTGAATATTGTCCACTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCGGACATCATTGTGGCTaGTTAAGAGATTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSGHHCG*LRDFLV
Trigger: AACCAGAAAATCTCTTAATCAGCCACAATGATGTCC...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCATTATTGCCTTCTaGCAGATTACGAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTSIIAF*QITSKT
Trigger: GGTTTTGCTCGTAATCTGTCAGAAGGCAATAATGCT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSGPSTF*IVKSWS
Trigger: TGACCAACTTTTTACTATTCAGAAGGTGCTAGGACC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTCCCAGCTTTGCTTTaGGAGCTTTCCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVPALL*ELSMNE
Trigger: CTCATTCATGGAAAGCTCTCAAAGCAAAGCTGGGAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGTTGTGGTTCGACGTaGGTCCAGCGTTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQGCGST*VQRSLI
Trigger: AATGAGGGAACGCTGGACTCACGTCGAACCACAACC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGGTTGTGGTTCGACGTaGGTCCAGCGTTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTGCGST*VQRSLI
Trigger: AATGAGGGAACGCTGGACTCACGTCGAACCACAACC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTGGTTGTGGTTCGACGTaGGTCCAGCGTTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIGCGST*VQRSLI
Trigger: AATGAGGGAACGCTGGACTCACGTCGAACCACAACC...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGTACATAGAATGCCTATaGGGACGTTGCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGYIECL*GRCWEE
Trigger: TTCTTCCCAGCAACGTCCTCATAGGCATTCTATGTA...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCLWRSL*PKILPQ
Trigger: CTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAG...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTGCTGGTTGTCTTTTTaGGTGGTTGGTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDCWLSF*VVGSRT
Trigger: AGTTCTGGAACCAACCACTCAAAAAGACAACCAGCA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTGGGGCCTCAAAGTTaGGCAAGGTTCATACTGTTA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILGPQS*ARFILL
Trigger: TAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCATTTTGATCATAGCTaGCTTGATGCAGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIHFDHS*LDAGAD
Trigger: GTCAGCCCCTGCATCAAGTCAGCTATGATCAAAATG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAAGCGCATAGCACAGTaGGAAGTCTTTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAKRIAQ*EVFPEK
Trigger: TTTCTCTGGAAAGACTTCTCACTGTGCTATGCGCTT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCCACCAGGTCCCAGGTaGACAGAAATAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISPPGPR*TEIDRS
Trigger: AGATCTGTCTATTTCTGTTCACCTGGGACCTGGTGG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTACTGAGTCCCAGCTaGGCTCCAGCACCGAATCAC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLLSPS*APAPNH
Trigger: GTGATTCGGTGCTGGAGCTCAGCTGGGACTCAGTAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATGCAAGGCGGGTCATaGTCATATTTAATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASMQGGS*SYLIAY
Trigger: GTAGGCTATTAAATATGATCATGACCCGCCTTGCAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAAGCTTGTCTACCCCTaGAAGAAATCAGATCAGACT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSKLVYP*KKSDQT
Trigger: AGTCTGATCTGATTTCTTTCAGGGGTAGACAAGCTT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTTCTGATAAGACCTaGAGCAGAGCACTAGGACAA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASSDKT*SRALGQ
Trigger: TTGTCCTAGTGCTCTGCTTCAGGTCTTATCAGAAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCTTTCCCTCCTGATTaGACATGTACTCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSFPPD*TCTRLV
Trigger: CACCAACCGAGTACATGTTCAATCAGGAGGGAAAGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTGCTTCAAGTCACATaGGATGTAGGAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLLQVT*DVGDGA
Trigger: GGCTCCATCTCCTACATCTCATGTGACTTGAAGCAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATTGCACCCCTAAAGTaGCCCTTGGAATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISIAPLK*PLEWML
Trigger: GAGCATCCATTCCAAGGGTCACTTTAGGGGTGCAAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATAGAGATGCTGCTGTaGATCCATTCTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIIEMLL*IHSQSP
Trigger: TGGGCTCTGAGAATGGATTCACAGCAGCATCTCTAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTTTCCCCCATTGAATaGTCTTGGCACCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILSPIE*SWHPCQ
Trigger: TTGACAAGGGTGCCAAGATCATTCAATGGGGGAAAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAGGTCAAGGCTGCAGTaGGCCATAATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCRSRLQ*AIILPL
Trigger: CAGTGGCAAGATTATGGCTCACTGCAGCCTTGACCT...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACTCCACAATGTTTTCCTaGTTGAGAGTCCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHSTMFS*LRVRSI
Trigger: AATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGA...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCTCCCCTCCGACGAAATaGTTCCTTCAACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGSPPTK*FLQLHN
Trigger: ATTGTGGAGTTGAAGGAAGCATTTCGTCGGAGGGGA...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFDRRS*HSHLWR
Trigger: CCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGTTGGTTCCAGAACTaGTCTCTGATGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGWFQN*SLMVEK
Trigger: CTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAACGGCCCCAACACATaGAATATTGCACACACCTTC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHNGPNT*NIAHTF
Trigger: GAAGGTGTGTGCAATATTGCATGTGTTGGGGCCGTT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGACGGAAACCAGGCCTaGTGGAATTCTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTDGNQA*WNSHWP
Trigger: AGGCCAGTGAGAATTCCAGCAGGCCTGGTTTCCGTC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGTATCATCAAGCAGCTaGCTGGAAAAGCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAVSSSS*LEKPEF
Trigger: GAATTCTGGCTTTTCCAGGCAGCTGCTTGATGATAC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGACCAGCAGAGAACGTaGAGATTTACTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDQQRT*RFTESQ
Trigger: CTGGGACTCAGTAAATCTGCACGTTCTCTGCTGGTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAGGCAACTTCTAATCTaGATACAACATGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASRQLLI*IQHGDR
Trigger: TCGGTCTCCATGTTGTATGCAGATTAGAAGTTGCCT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTATCCATGCAGCCTCTaGAATACAAAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRYPCSL*NTKAEL
Trigger: CAGCTCTGCCTTTGTATTGCAGAGGCTGCATGGATA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCTGGGCTTTTAAGCTaGATCCCCAGAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPGLLS*IPRGPP
Trigger: TGGAGGTCCTCTGGGGATGCAGCTTAAAAGCCCAGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGCTCACTGCAACCTCTaGCTTTTGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRAHCNL*LLGSSD
Trigger: ATCACTTGAACCCAAAAGGCAGAGGTTGCAGTGAGC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTTGAGACTCTCAAGTaGTCTGCAGGTTATTATCTC +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLETLK*SAGYYL
Trigger: GAGATAATAACCTGCAGAGCACTTGAGAGTCTCAAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGACCCTTGGAATGGATaGTCACAGAACCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRDPWNG*SQNPIF
Trigger: AAAGATGGGGTTCTGTGAGCATCCATTCCAAGGGTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTCGATATTCTCACTGGTTGGTaGGAACTTTCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: LSLMLLNDERWLNLLFLDILTGW*ELSHIC
Trigger: ACAAATATGTGAAAGTTCCCACCAACCAGTGAGAAT...ATCGAGGAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGGAAGAAATTCTCACTaGTTGGTGGGAACTTTCACA +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQGRNSH*LVGTFT
Trigger: TGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTAGGATGGTTAACAGCTaGAAACCGGAGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIRMVNS*KPEPME
Trigger: TTCCATGGGCTCCGGTTTCCAGCTGTTAACCATCCT...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGCCTACACTCAGGTTCTaGATGTCCTTGCTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGPTLRF*MSLLLD
Trigger: ATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGG...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCCTACACTCAGGTTCTaGATGTCCTTGCTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAPTLRF*MSLLLD
Trigger: ATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTAGGAAGCTTTCATTaGCAGGGAGACCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILGSFH*QGDLRQ
Trigger: CTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTAGGAAGCTTTCATTaGCAGGGAGACCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLGSFH*QGDLRQ
Trigger: CTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGTTTTGGTGTGCAGTaGACTAAGACTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIGFGVQ*TKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTGGTTGCTCACAGACTTaGAGTCACTCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCGCSQT*SHSVPH
Trigger: ATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACC...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAGTACCTACTGGTACTaGGCTCCGCAATTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSTYWY*APQFGP
Trigger: GGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGGGAAGTACCTACTaGTACTGGGCTCCGCAATTT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRMGSTY*YWAPQF
Trigger: AAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGACTTCTGGCGTGTATaGAAGGAAGAGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIDFWRV*KEEVPS
Trigger: AGAAGGCACCTCTTCCTTCCATACACGCCAGAAGTC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGACACATTATTTTCATaGAAAGAATTGTCTGGACGT +
Preference number: 4 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPDTLFS*KELSGR
Trigger: ACGTCCAGACAATTCTTTCCATGAAAATAATGTGTC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALWSAA*SASRMN
Trigger: ATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGTCGGACCTGGAGTACTaGATAGGGAGCAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQSDLEY*IGSRTG
Trigger: TCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGA...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAAGACCTGTGGGGAGTaGCGATCCCTAAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTKTCGE*RSLRNS
Trigger: GGAGTTCCTTAGGGATCGCCACTCCCCACAGGTCTT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACTCACACAAGACCTGTaGGGAGTGGCGATCCCTAAG +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLTQDL*GVAIPK
Trigger: CTTAGGGATCGCCACTCCCCACAGGTCTTGTGTGAG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTACTTGGGAGTAACTTaGGAGCTGAAAGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSYLGVT*ELKEIR
Trigger: TCTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACCAAGCTCTGCAGACTaGTGGGCTTGGGATGGTGTA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTPSSAD*WAWDGV
Trigger: TACACCATCCCAAGCCCACCAGTCTGCAGAGCTTGG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGCAGGCCCAAGACAATaGAAACGAACAATAGGATTC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAAGPRQ*KRTIGF
Trigger: GAATCCTATTGTTCGTTTCCATTGTCTTGGGCCTGC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACACAGTGCTCAAGATTaGGACGGCCTGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTHSAQD*DGLAVT
Trigger: TGTGACTGCCAGGCCGTCCCAATCTTGAGCACTGTG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCTGTTGCTTCCCCTGTaGTCCCAAGAGTACTTCCAT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLLLPL*SQEYFH
Trigger: ATGGAAGTACTCTTGGGACCACAGGGGAAGCAACAG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCTCTTGTTTAATCTTTaGAGGAACTATTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: ASIYSPLCASNVPGHKQELLFNL*RNYYPK
Trigger: CTTGGGATAATAGTTCCTCCAAAGATTAAACAAGAG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTACTGTCTCTGTAGATTaGCCTTCTGGACGTTCTACA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRATVSVD*PSGRST
Trigger: TGTAGAACGTCCAGAAGGCCAATCTACAGAGACAGT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp AGCCCTCTGCAACCACGAATCGACTGTCTCTGTAGATaGGCCTTCTGGACGTTCTACATAAATGAAATCATA +
Preference number: 4 (lower is better)
Translates to: SPLQPRIDCLCR*AFWTFYINEII
Trigger: TATGATTTCATTTATGTAGAACGTCCAGAAGGCCAATCTACAGAGACAGTCGATTCGTGGTTGCAGAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp TCTCCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTaGTGCTCCCTACAGGAAGTAGCAGAGCACACTGTA +
Preference number: 4 (lower is better)
Translates to: SPSSFQSLPKKA*CSLQEVAEHTV
Trigger: TACAGTGTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTTTCTTCCAGAAGGGCTaGGCAAAGTTCTCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCFFQKG*AKFSCH
Trigger: GTGACACGAGAACTTTGCTCAGCCCTTCTGGAAGAA...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVRCRQ*MGMATV
Trigger: GACAGTAGCCATTCCCATTCACTGTCTGCACCTCAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTCAGAGTGTGGGTCATaGTACACTCCACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSECGS*YTPPSD
Trigger: GTCTGAGGGTGGAGTGTATCATGACCCACACTCTGA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTGCTGGTTGTCTTTTTaGGTGGTTGGTTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHCWLSF*VVGSRT
Trigger: AGTTCTGGAACCAACCACTCAAAAAGACAACCAGCA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGGAGTGCTAGCAGAATaGATGGATTTCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISGVLAE*MDFCNV
Trigger: GACGTTGCAGAAATCCATTCATTCTGCTAGCACTCC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCAGATTTGGCATTCGTaGGCGATTTGTTCTGTTATA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASQIWHS*AICSVI
Trigger: TATAACAGAACAAATCGCTCACGAATGCCAAATCTG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAAGCGCATAGCACAGTaGGAAGTCTTTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHKRIAQ*EVFPEK
Trigger: TTTCTCTGGAAAGACTTCTCACTGTGCTATGCGCTT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAGCCATTGCCCTTGCTaGAAGAGTTCAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSHCPC*KSSVTT
Trigger: GGTGGTGACTGAACTCTTTCAGCAAGGGCAATGGCT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAGGCTTTTAAGTCTTTaGGAGGATCTTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASRLLSL*EDLLVR
Trigger: TCTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTTTCCCTCCTGATTaGACATGTACTCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSFPPD*TCTRLV
Trigger: CACCAACCGAGTACATGTTCAATCAGGAGGGAAAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTTCACAACAACACTaGGGTAGGTACTGTGATTAC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASSQQH*GRYCDY
Trigger: GTAATCACAGTACCTACCTCAGTGTTGTTGTGAAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCCTTCTCAATTTCCTaGAACTGCCAAATTGGGACA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASFSIS*NCQIGT
Trigger: TGTCCCAATTTGGCAGTTTCAGGAAATTGAGAAGGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCCCACCACTATTTGCTaGAAAGACTATTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIPTTIC*KDYSFP
Trigger: GGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCCACCACTATTTGCTaGAAAGACTATTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRPTTIC*KDYSFP
Trigger: GGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCCAAATCCAAGGTCATaGAGATTTACCCCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASPNPRS*RFTPMF
Trigger: AAACATAGGGGTAAATCTTCATGACCTTGGATTTGG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTTTGGTGTCATATCTaGGAAACCACTGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLWCHI*ETTAKS
Trigger: GGATTTGGCAGTGGTTTCTCAGATATGACACCAAAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTTGCTTTTCATTGGGCTaGAGTGTCCCAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGICFSLG*SVPALL
Trigger: AAGCAAAGCTGGGACACTGCAGCCCAATGAAAAGCA...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLAAIP*PMLKLP
Trigger: TGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGTTGGTTCCAGAACTaGTCTCTGATGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIGWFQN*SLMVEK
Trigger: CTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGCTTGCAGAAGTCACTTaGCCGTCAGTGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQLAEVT*PSVPHS
Trigger: AGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAG...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCCTATCCCTTGCAGTaGCAGGACACATCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSYPLQ*QDTSWH
Trigger: ATGCCAGGATGTGTCCTGGCACTGCAAGGGATAGGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATGCTGCATCTCGTCTaGTACCAAGGATCATGTCTA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHMLHLV*YQGSCL
Trigger: TAGACATGATCCTTGGTAGCAGACGAGATGCAGCAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTGGAAAGAGATGCTaGATCTCGTCTGCTACCAAG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFGKRC*ISSATK
Trigger: CTTGGTAGCAGACGAGATGCAGCATCTCTTTCCAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACGGAAGAAATTGTAACTaGTTACAAGTTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNGRNCN*LQVWFL
Trigger: CAGAAACCAAACTTGTAAGCAGTTACAATTTCTTCC...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATCACATCACACCCTTaGCACAGTAAAAAGTATGGA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASITSHP*HSKKYG
Trigger: TCCATACTTTTTACTGTGGCAAGGGTGTGATGTGAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGAGTGTCTAGCGACGTaGAAAGGTGACAACACTCAA +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISECLAT*KGDNTQ
Trigger: TTGAGTGTTGTCACCTTTGCACGTCGCTAGACACTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCTTGAGACTCTCAAGTaGTCTGCAGGTTATTATCTC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALETLK*SAGYYL
Trigger: GAGATAATAACCTGCAGAGCACTTGAGAGTCTCAAG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCAACGTCATTCTTTTaGATGTGGATATCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSPTSFF*MWISSC
Trigger: ACAACTGGATATCCACATGCAAAAGAATGACGTTGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCGAAATTCTCACTGGTTaGTGGGAACTTTCACATATT +
Preference number: 4 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFEILTG*WELSHI
Trigger: AATATGTGAAAGTTCCCACCAACCAGTGAGAATTTC...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGGGACCGATACCATCTaGTGGCAACGTACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTGTDTI*WQRTLC
Trigger: ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAGGATGGTTAACAGCTaGAAACCGGAGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCRMVNS*KPEPME
Trigger: TTCCATGGGCTCCGGTTTCCAGCTGTTAACCATCCT...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTCCACCCTCAGACTTCTaGCGTGTATGGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIPPSDF*RVWKEE
Trigger: CTCTTCCTTCCATACACGCCAGAAGTCTGAGGGTGG...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIVFLSG*FQNCSL
Trigger: CAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGAC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVGCLFE*LVPELL
Trigger: GAGCAGTTCTGGAACCAACCACTCAAAAAGACAACC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTTCAGGACTTTTCCATaGATCGAATGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDFRTFP*IECWLS
Trigger: AGACAACCAGCATTCGATCCATGGAAAAGTCCTGAA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRLWSAA*SASRMN
Trigger: ATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTAATGGCTGGCTTTaGGTCTGCAGATCTGAGATC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFNGWL*VCRSEI
Trigger: GATCTCAGATCTGCAGACCCAAAGCCAGCCATTAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGTAAAGGGGAGAAACTaGCAAGAATTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSVKGRN*QEFLLP
Trigger: AGGAAGAAGAAATTCTTGCCAGTTTCTCCCCTTTAC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTCACTGGCAAATCTTTaGTCTACGCTCTACACTAAT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSSLANL*STLYTN
Trigger: ATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAAATCTTGTCATAAGTaGACAGCCCCAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASKSCHK*TAPGRK
Trigger: TTTTCTTCCTGGGGCTGTCCACTTATGACAAGATTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAAGTCCTTTCTACCATaGATGGCAATCTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASKSFLP*MAIFVM
Trigger: CATCACAAAGATTGCCATCCATGGTAGAAAGGACTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGGAACATGCTAAACTaGCTAACTCTACAACCACAA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSRNMLN*LTLQPQ
Trigger: TTGTGGTTGTAGAGTTAGCCAGTTTAGCATGTTCCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCACTATTTTCTGACTTaGTTCAGTGTACCCTACCAC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAHYFLT*FSVPYH
Trigger: GTGGTAGGGTACACTGAACCAAGTCAGAAAATAGTG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAACCAAGGATCAAATaGGGTTTCGAGAGCTTAACC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVREPRIK*GFESLT
Trigger: GGTTAAGCTCTCGAAACCCCATTTGATCCTTGGTTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAAGATTGGGACGGCCTaGCAGTCACATCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFKIGTA*QSHQSV
Trigger: CACTGACTGATGTGACTGCCAGGCCGTCCCAATCTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATATGTTATACATCGTaGGGACTTGTTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASICYTS*GLVTCS
Trigger: AGAGCAGGTAACAAGTCCCCACGATGTATAACATAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGAGTACTTCCATGCTaGGTCATTCTTAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHRVLPC*VILKPN
Trigger: GTTGGGCTTAAGAATGACCCAGCATGGAAGTACTCT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTTTCTCCCATTCTGTaGATCTTTTTAACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSFSPIL*IFLTLS
Trigger: CGAGAGGGTTAAAAAGATCCACAGAATGGGAGAAAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGACAAACTCCTCTTTTaGTGCAAGCCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVDKLLF*CKPQNM
Trigger: CATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGILLDLW*DCKAVL
Trigger: AAGTACTGCTTTGCAGTCTCACCACAGATCTAACAG...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLLDLW*DCKAVL
Trigger: AAGTACTGCTTTGCAGTCTCACCACAGATCTAACAG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTGTCCCTGGGCCTTCTaGAGGCTTTGGGTCAATATT +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFCPWAF*RLWVNI
Trigger: AATATTGACCCAAAGCCTTCAGAAGGCCCAGGGACA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTCTGAGATCTGCTGTTTaGCTTGAGGTACTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCLRSAV*LEVLCP
Trigger: GGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAG...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTTTTGAGAGCTTTCCATaGATGAGTGGCGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCFESFP*MSGGSA
Trigger: AGCAGAACCGCCACTCATTCATGGAAAGCTCTCAAA...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTTCTTCCAGAAGGGCTaGGCAAAGTTCTCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFFFQKG*AKFSCH
Trigger: GTGACACGAGAACTTTGCTCAGCCCTTCTGGAAGAA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAATTTTTGGTTTGTTaGGCTGTTAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVREFLVC*AVKGWK
Trigger: CTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGTGAATCCGAATTTCTaGGAAGGAATTTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSVNPNF*EGIFGL
Trigger: CAAACCAAAAATTCCTTCTCAGAAATTCGGATTCAC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGAGAAGTTATCTCTTTaGGGGGTGGGAGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFEKLSL*GVGGTF
Trigger: AAAGGTCCCTCCCACCCCTCAAAGAGATAACTTCTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTACCCAAACAGTACTaGACTGGTGAAAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLPKQY*TGERSK
Trigger: CTTACTTCTTTCACCAGTTCAGTACTGTTTGGGTAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGCACCGAATCACATTaGGCCATTGCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSTESH*AIALAE
Trigger: TTCAGCAAGGGCAATGGCTCAATGTGATTCGGTGCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCTTACTCATCGTTTCTaGGACAGAATTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSLTHRF*DRIFHQ
Trigger: CTGATGAAAAATTCTGTCTCAGAAACGATGAGTAAG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAAACTCTACAGAGTTTaGACCGGAGCTTTTGACAAT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAKLYRV*TGAFDN
Trigger: ATTGTCAAAAGCTCCGGTTCAAACTCTGTAGAGTTT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCTTCACAACAACACTaGGGTAGGTACTGTGATTAC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSSQQH*GRYCDY
Trigger: GTAATCACAGTACCTACCTCAGTGTTGTTGTGAAGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTTTTGTATATGGTGTaGAATAGGAGTCCAACGTCA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASFLYMV*NRSPTS
Trigger: TGACGTTGGACTCCTATTTCACACCATATACAAAAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCCAAATCCAAGGTCATaGAGATTTACCCCTATGTTT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAPNPRS*RFTPMF
Trigger: AAACATAGGGGTAAATCTTCATGACCTTGGATTTGG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACAGCTATAAAGTTATTTaGAAAGAGCTTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHSYKVI*KELLAW
Trigger: CCAGGCTAGAAGCTCTTTTCAAATAACTTTATAGCT...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCCACAATGTTTTCCTaGTTGAGAGTCCGAAGCATT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISTMFS*LRVRSI
Trigger: AATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGTTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQFLWGL*HHQSVG
Trigger: ACCCACACTCTGATGATGGCACAGCCCCCAAAGAAA...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTFLWGL*HHQSVG
Trigger: ACCCACACTCTGATGATGGCACAGCCCCCAAAGAAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQRDVTT*AVILMA
Trigger: AGCCATTAAAATCACTGCGCAAGTTGTTACATCTCT...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR GCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCAACACATGCAATATTaGACACACCTTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSQHMQY*THLHKA
Trigger: AGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCACTGCCGCAATTTTaGTGGCCCTACAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSLPQF*WPYKSS
Trigger: GCTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCATAGTGAAGTGCCTTaGTTCAAGTCACATGAGATG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRHSEVP*FKSHEM
Trigger: CATCTCATGTGACTTGAAGCAAGGCACTTCACTATG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTACAGCCAATCATGACTaGTGGATTTGGCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAITANHD*WIWPLG
Trigger: CCCAAGTGGCCAAATCCAGCAGTCATGATTGGCTGT...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGATTCTCACTGGTTGGTaGGAACTTTCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQILTGW*ELSHIC
Trigger: ACAAATATGTGAAAGTTCCCACCAACCAGTGAGAAT...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCGAAATTCTCACTGGTTaGTGGGAACTTTCACATATT +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTEILTG*WELSHI
Trigger: AATATGTGAAAGTTCCCACCAACCAGTGAGAATTTC...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGCAAGCCACAAAACATaGCACCAAAAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHASHKT*HQKNFS
Trigger: TGAGAAGTTCTTTTGGTGCCATGTTTTGTGGCTTGC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTACCGATACCATCTGGTaGCAACGTACTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISTDTIW*QRTLCN
Trigger: ATTACACAGAGTACGTTGCCACCAGATGGTATCGGT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTTTAGGAAGCTTTCATTaGCAGGGAGACCTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCLGSFH*QGDLRQ
Trigger: CTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAA...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGTGGGCTAAGAAGGTGTaGTATGTTGTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TLQDLKELGTETQGKWLQWAKKV*YVVVGE
Trigger: CTCACCAACAACAACATACCACACCTTCTTAGCCCA...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGACTCTGCTTTTCATTaGGCTGCAGTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTDSAFH*AAVSQL
Trigger: AAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTGACTCTGCTTTTCATTaGGCTGCAGTGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIDSAFH*AAVSQL
Trigger: AAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTC...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAAGAATTGTCTGGACGTaGAGATGGCACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVRIVWT*RWHSVK
Trigger: TTTTACAGAGTGCCATCTCCACGTCCAGACAATTCT...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATGGAAAGAATTGTCTaGACGTGGAGATGGCACTCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISMERIV*TWRWHS
Trigger: AGAGTGCCATCTCCACGTCCAGACAATTCTTTCCAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIVFLSG*FQNCSL
Trigger: CAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGAC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTCAGGACTTTTCCATaGATCGAATGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRFRTFP*IECWLS
Trigger: AGACAACCAGCATTCGATCCATGGAAAAGTCCTGAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRTRNVH*QIFGLR
Trigger: GCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTCTGTAGGTATTTTCTaGCTCAAATCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASSVGIF*LKSGKV
Trigger: TACTTTCCCAGATTTGAGCCAGAAAATACCTACAGA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCACTATTTTCTGACTTaGTTCAGTGTACCCTACCAC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHHYFLT*FSVPYH
Trigger: GTGGTAGGGTACACTGAACCAAGTCAGAAAATAGTG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCACTTAGCACAAGATTaGCCTCTCTTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFHLAQD*PLFPSS
Trigger: GGAGGATGGGAAGAGAGGCCAATCTTGTGCTAAGTG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAAGGGGATGGAAGGTaGCACATAAATTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKGDGR*HINCCE
Trigger: CTCACAACAATTTATGTGCCACCTTCCATCCCCTTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATGAGATGTAGGAGATaGAGCCAAGACTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTMRCRR*SQDSTQ
Trigger: CTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTGAAACTGCCAAATTaGGACAGAAGTAATAGCAAT +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLKLPN*DRSNSN
Trigger: ATTGCTATTACTTCTGTCCCAATTTGGCAGTTTCAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTGGGAGGAGGTTACTTaGACAAAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHWEEVT*TKQRYF
Trigger: GAAATACCTTTGCTTTGTCCAAGTAACCTCCTCCCA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCATTCTTTTGCATGTaGATATCCAGTTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISFFCM*ISSCPT
Trigger: GGTGGGACAACTGGATATCCACATGCAAAAGAATGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp TTTCTGGTTATTTTTGTAAGCCAGGCTTTTAAGTCTTaGAGAGGATCTTCTTGTGAGATTCTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLVIFVSQAFKS*RGSSCEILALG
Trigger: TCCCAGGGCCAGAATCTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCTGGCTTACAAAAATAACCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp CATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTaGGCTATTCTGGGTTCCTTGAATTTCCATATGAAT +
Preference number: 4 (lower is better)
Translates to: HVSPPTLLFGIV*AILGSLNFHMN
Trigger: ATTCATATGGAAATTCAAGGAACCCAGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp CTCCACATCCTCAGCAACACTTGTTACTGTCCATCTTaGACTATACCCATAATGTGTGAAGTTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: LHILSNTCYCPS*TIPIMCEVASQ
Trigger: TTGAGATGCAACTTCACACATTATGGGTATAGTCAAAGATGGACAGTAACAAGTGTTGCTGAGGATGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTAGATCCAAAACCGTCTaGAGGAAGAAATTCTCACTG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIRSKTV*RKKFSL
Trigger: CAGTGAGAATTTCTTCCTTCAGACGGTTTTGGATCT...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGACAAACTCCTCTTTTaGTGCAAGCCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDKLLF*CKPQNM
Trigger: CATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGAGTGCTAGCAGAATaGATGGATTTCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQGVLAE*MDFCNV
Trigger: GACGTTGCAGAAATCCATTCATTCTGCTAGCACTCC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGGAGTGCTAGCAGAATaGATGGATTTCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFGVLAE*MDFCNV
Trigger: GACGTTGCAGAAATCCATTCATTCTGCTAGCACTCC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGAATTTTTGGTTTGTTaGGCTGTTAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISEFLVC*AVKGWK
Trigger: CTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACGTGAATCCGAATTTCTaGGAAGGAATTTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDVNPNF*EGIFGL
Trigger: CAAACCAAAAATTCCTTCTCAGAAATTCGGATTCAC...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTGGGGCCTCAAAGTTaGGCAAGGTTCATACTGTTA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLGPQS*ARFILL
Trigger: TAACAGTATGAACCTTGCTCAACTTTGAGGCCCCAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATTCTAGCCCTTCTTTaGAGAACCGTCATGAATAGA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHILALL*RTVMNR
Trigger: TCTATTCATGACGGTTCTTCAAAGAAGGGCTAGAAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTCAGGCATAGTGGTTaGAGACTCTTAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFRHSG*RLLREC
Trigger: ACATTCTCTTAAGAGTCTTCAACCACTATGCCTGAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCAGGCATAGTGGTTaGAGACTCTTAAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFRHSG*RLLREC
Trigger: ACATTCTCTTAAGAGTCTTCAACCACTATGCCTGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTATTTCACTATTTTCTaGCTTGGTTCAGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAYFTIF*LGSVYP
Trigger: AGGGTACACTGAACCAAGTCAGAAAATAGTGAAATA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAGGCTTTTAAGTCTTTaGGAGGATCTTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRRLLSL*EDLLVR
Trigger: TCTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAAGCTTGTCTACCCCTaGAAGAAATCAGATCAGACT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISKLVYP*KKSDQT
Trigger: AGTCTGATCTGATTTCTTTCAGGGGTAGACAAGCTT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCACAGCCACACTTACTaGTTTACATATTATCCATGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRHSHTY*FTYYPC
Trigger: GCATGGATAATATGTAAATCAGTAAGTGTGGCTGTG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTATTGAGGGAAATCTaGAGCCTAATAGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRALLREI*SLIESC
Trigger: GCAAGATTCTATTAGGCTTCAGATTTCCCTCAATAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTATCCATTCATCCATTaGTGGATATTTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAYPFIH*WIFGFP
Trigger: TGGAAACCCAAATATCCATCAATGGATGAATGGATA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGTACCATGGGTGGAGTaGCTACAGGAAGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFVPWVE*LQEAFS
Trigger: TGAAAAAGCTTCCTGTAGTCACTCCACCCATGGTAC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS-3UTR GCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQFDRRS*HSHLWR
Trigger: CCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAA...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAATCTGCCAGGCTGTTaGTTGCTTCTAAATATAAGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRNLPGC*LLLNIS
Trigger: GCTTATATTTAGAAGCAAGCAACAGCCTGGCAGATT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATATCCATGCAGCCTCTaGAATACAAAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTYPCSL*NTKAEL
Trigger: CAGCTCTGCCTTTGTATTGCAGAGGCTGCATGGATA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACCAAGAGTACTTCCATaGTGGGTCATTCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTPRVLP*WVILKP
Trigger: GGGCTTAAGAATGACCCAGCATGGAAGTACTCTTGG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCAACGTCATTCTTTTaGATGTGGATATCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRPTSFF*MWISSC
Trigger: ACAACTGGATATCCACATGCAAAAGAATGACGTTGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTATTCTCACTGGTTGGTaGGAACTTTCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAILTGW*ELSHIC
Trigger: ACAAATATGTGAAAGTTCCCACCAACCAGTGAGAAT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGAAATTCTCACTGGTTaGTGGGAACTTTCACATATT +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAEILTG*WELSHI
Trigger: AATATGTGAAAGTTCCCACCAACCAGTGAGAATTTC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCGTACTTTTGCCGGCTTaGTTTCTATTAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGVLLPA*FLLDNV
Trigger: CACATTGTCTAATAGAAACCAAGCCGGCAAAAGTAC...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CCA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCGACACATTATTTTCATaGAAAGAATTGTCTGGACGT +
Preference number: 4 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTDTLFS*KELSGR
Trigger: ACGTCCAGACAATTCTTTCCATGAAAATAATGTGTC...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTCAGGACTTTTCCATaGATCGAATGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFRTFP*IECWLS
Trigger: AGACAACCAGCATTCGATCCATGGAAAAGTCCTGAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTCAGGGCTGTCGGAATTaGGTACTGTTTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCQGCRN*VLFEIS
Trigger: AGAAATCTCAAACAGTACCCAATTCCGACAGCCCTG...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCAAAGGGATACTCTTaGATTACAATAAACCCCACA +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASKGYS*ITINPT
Trigger: TGTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGAGTCTCCGGGACAGTaGACAATATTCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTESPGQ*TIFRSI
Trigger: TATGCTCCTGAATATTGTCCACTGTCCCGGAGACTC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAAATCTTGTCATAAGTaGACAGCCCCAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHKSCHK*TAPGRK
Trigger: TTTTCTTCCTGGGGCTGTCCACTTATGACAAGATTT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTTTCTGGCTCAAATCTaGGAAAGTACAAAAAGTACG +
Preference number: 4 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAFLAQI*ESTKST
Trigger: CGTACTTTTTGTACTTTCCCAGATTTGAGCCAGAAA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGAGGAAAAACGAGGATaGCAGAGAAATAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHEEKRG*QRNKGR
Trigger: TCTACCTTTATTTCTCTGCCATCCTCGTTTTTCCTC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTACCTGAATTCAAAATaGCACAAAGCAATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IGACESSNFALRDCFGYSYLNSK*HKAILG
Trigger: TCCAAGAATTGCTTTGTGCCATTTTGAATTCAGGTA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGATGTCACATCATTCTaGCTTATCCCTATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASDVTSF*LIPIFK
Trigger: CTTAAAAATAGGGATAAGCCAGAATGATGTGACATC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAGCACGGTCTACACTaGAGTTTGTTTAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVREHGLH*SLFKNC
Trigger: GCAATTTTTAAACAAACTCCAGTGTAGACCGTGCTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGCTGGGATTTCACATTaGAAACTGCTCAATACTTCA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHAGISH*KLLNTS
Trigger: TGAAGTATTGAGCAGTTTCCAATGTGAAATCCCAGC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGTGGTATTTCGTGACTaGCTTCTTTCACTTAGCATA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHVVFRD*LLSLSI
Trigger: TATGCTAAGTGAAAGAAGCCAGTCACGAAATACCAC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGTGGTATTTCGTGACTaGCTTCTTTCACTTAGCATA +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRVVFRD*LLSLSI
Trigger: TATGCTAAGTGAAAGAAGCCAGTCACGAAATACCAC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATTGGGTACCATGGGTaGAGTGACTACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTIGYHG*SDYRKL
Trigger: AAGCTTCCTGTAGTCACTCCACCCATGGTACCCAAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS-3UTR TCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGGACATCATTGTGGCTaGTTAAGAGATTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISGHHCG*LRDFLV
Trigger: AACCAGAAAATCTCTTAATCAGCCACAATGATGTCC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTACATAGAATGCCTATaGGGACGTTGCTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFYIECL*GRCWEE
Trigger: TTCTTCCCAGCAACGTCCTCATAGGCATTCTATGTA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTCCTTGAGTTGCTCTaGATGACTAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRFLELL*MTNIFR
Trigger: CCTGAAAATATTAGTCATTCAGAGCAACTCAAGGAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAAGGTAGAAAAACAGTaGAGCAGAGTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIKVEKQ*SRVSFP
Trigger: TGGAAAAGAAACTCTGCTTCACTGTTTTTCTACCTT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTATTTCACTATTTTCTaGCTTGGTTCAGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIYFTIF*LGSVYP
Trigger: AGGGTACACTGAACCAAGTCAGAAAATAGTGAAATA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCTTAGTGATGAACTaGAGGAGGCAAGGAAATATT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFLVMN*RRQGNI
Trigger: AATATTTCCTTGCCTCCTTCAGTTCATCACTAAGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAATTTTTCATCAGCTaGACCAGACCTCAAGATATT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVREFFIS*TRPQDI
Trigger: AATATCTTGAGGTCTGGTTCAGCTGATGAAAAATTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCTTCTGATAAGACCTaGAGCAGAGCACTAGGACAA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSSDKT*SRALGQ
Trigger: TTGTCCTAGTGCTCTGCTTCAGGTCTTATCAGAAGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACTTTGGTGTCATATCTaGGAAACCACTGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLWCHI*ETTAKS
Trigger: GGATTTGGCAGTGGTTTCTCAGATATGACACCAAAG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGACCTGAAAAATCCTTaGTTCTCTTTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRDLKNP*FSFSLS
Trigger: ACTCAAGGAAAAAGAGAAGCAAGGATTTTTCAGGTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAAAATCATGCCAATCTaGCAGGCTGTTGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTKIMPI*QAVACF
Trigger: GAAGCAAGCAACAGCCTGGCAGATTGGCATGATTTT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGGAAAACCTAAGCCGTaGTGGAGAACTTACTTACAC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFGKPKP*WRTYLH
Trigger: GTGTAAGTAAGTTCTCCAGCACGGCTTAGGTTTTCC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAACCGATACCATCTGGTaGCAACGTACTCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTTDTIW*QRTLCN
Trigger: ATTACACAGAGTACGTTGCCACCAGATGGTATCGGT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGTACTTTTGCCGGCTTaGTTTCTATTAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIVLLPA*FLLDNV
Trigger: CACATTGTCTAATAGAAACCAAGCCGGCAAAAGTAC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTGGGCTAAGAAGGTGTaGTATGTTGTTGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFWAKKV*YVVVGE
Trigger: CTCACCAACAACAACATACCACACCTTCTTAGCCCA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVFLSG*FQNCSL
Trigger: CAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGTAAAGGGGAGAAACTaGCAAGAATTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISVKGRN*QEFLLP
Trigger: AGGAAGAAGAAATTCTTGCCAGTTTCTCCCCTTTAC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCAAAGGGATACTCTTaGATTACAATAAACCCCACA +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISKGYS*ITINPT
Trigger: TGTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTTCTGGCTCAAATCTaGGAAAGTACAAAAAGTACG +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFLAQI*ESTKST
Trigger: CGTACTTTTTGTACTTTCCCAGATTTGAGCCAGAAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAATCTGCATACAACATaGAGACCGATTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPINLHTT*RPIFRF
Trigger: GAATCTGAAAATCGGTCTCCATGTTGTATGCAGATT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCTGAAACTGCCAAATTaGGACAGAAGTAATAGCAAT +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLKLPN*DRSNSN
Trigger: ATTGCTATTACTTCTGTCCCAATTTGGCAGTTTCAG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAGAGTACTTCCATGCTaGGTCATTCTTAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTRVLPC*VILKPN
Trigger: GTTGGGCTTAAGAATGACCCAGCATGGAAGTACTCT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAACTGTCTCTGTAGATTaGCCTTCTGGACGTTCTACA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTTVSVD*PSGRST
Trigger: TGTAGAACGTCCAGAAGGCCAATCTACAGAGACAGT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTGGATTCTCCCCGTTaGTGGAATCTGTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLDSPR*WNLLFE
Trigger: CTCAAACAACAGATTCCACCAACGGGGAGAATCCAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGACAAACTCCTCTTTTaGTGCAAGCCACAAAACATG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFDKLLF*CKPQNM
Trigger: CATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQGPSTF*IVKSWS
Trigger: TGACCAACTTTTTACTATTCAGAAGGTGCTAGGACC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTTTCCTTGAGTTGCTCTaGATGACTAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIFLELL*MTNIFR
Trigger: CCTGAAAATATTAGTCATTCAGAGCAACTCAAGGAA...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR TCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGAATTTTTGGTTTGTTaGGCTGTTAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQEFLVC*AVKGWK
Trigger: CTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGACAGGTACCTCTTATaGTCTCACAACAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFDRYLL*SHNKEC
Trigger: ACATTCCTTGTTGTGAGATCATAAGAGGTACCTGTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTACCCAAACAGTACTaGACTGGTGAAAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLPKQY*TGERSK
Trigger: CTTACTTCTTTCACCAGTTCAGTACTGTTTGGGTAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATGCAAGGCGGGTCATaGTCATATTTAATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTMQGGS*SYLIAY
Trigger: GTAGGCTATTAAATATGATCATGACCCGCCTTGCAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATTTCTGTCTCAAACTaGTTACAACCTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTISVSN*LQPQRP
Trigger: GGGCCTTTGAGGTTGTAATCAGTTTGAGACAGAAAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGGACCTGAAAAATCCTTaGTTCTCTTTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TLQDLKELGTETQGKWLQDLKNP*FSFSLS
Trigger: ACTCAAGGAAAAAGAGAAGCAAGGATTTTTCAGGTC...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGACCTGAAAAATCCTTaGTTCTCTTTTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDLKNP*FSFSLS
Trigger: ACTCAAGGAAAAAGAGAAGCAAGGATTTTTCAGGTC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRDVTT*AVILMA
Trigger: AGCCATTAAAATCACTGCGCAAGTTGTTACATCTCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCAACACATGCAATATTaGACACACCTTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISQHMQY*THLHKA
Trigger: AGCTTTATGAAGGTGTGTGCAATATTGCATGTGTTG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATGGTTTGCAAGATCTaGAGACAGGTACCTCTTATG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFMVCKI*RQVPLM
Trigger: CATAAGAGGTACCTGTCTGCAGATCTTGCAAACCAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGGAAGAAATTGTAACTaGTTACAAGTTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LETDSIALSLELKYNCVRGRNCN*LQVWFL
Trigger: CAGAAACCAAACTTGTAAGCAGTTACAATTTCTTCC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTACATATTATCCATaGAGCCTCTGCAATACAAAG +
Preference number: 4 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFTYYP*SLCNTK
Trigger: CTTTGTATTGCAGAGGCTGCATGGATAATATGTAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCATAGTGAAGTGCCTTaGTTCAAGTCACATGAGATG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFHSEVP*FKSHEM
Trigger: CATCTCATGTGACTTGAAGCAAGGCACTTCACTATG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTATTATCCCAAGTGGCTaGATCATTTTACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISIIPSG*IILHFH
Trigger: GTGGAAATGTAAAATGATGCAGCCACTTGGGATAAT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGAAATTCTCACTGGTTaGTGGGAACTTTCACATATT +
Preference number: 4 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIEILTG*WELSHI
Trigger: AATATGTGAAAGTTCCCACCAACCAGTGAGAATTTC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGGAAGAAATTCTCACTaGTTGGTGGGAACTTTCACA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFGRNSH*LVGTFT
Trigger: TGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGCAAGCCACAAAACATaGCACCAAAAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTASHKT*HQKNFS
Trigger: TGAGAAGTTCTTTTGGTGCCATGTTTTGTGGCTTGC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTGCAAGCCACAAAACATaGCACCAAAAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIASHKT*HQKNFS
Trigger: TGAGAAGTTCTTTTGGTGCCATGTTTTGTGGCTTGC...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTGTACTTTTGCCGGCTTaGTTTCTATTAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCVLLPA*FLLDNV
Trigger: CACATTGTCTAATAGAAACCAAGCCGGCAAAAGTAC...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGAATTGTCTGGACGTaGAGATGGCACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFRIVWT*RWHSVK
Trigger: TTTTACAGAGTGCCATCTCCACGTCCAGACAATTCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGACACATTATTTTCATaGAAAGAATTGTCTGGACGT +
Preference number: 4 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVDTLFS*KELSGR
Trigger: ACGTCCAGACAATTCTTTCCATGAAAATAATGTGTC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAACAAGGAATGTTCACTaGCAAATCTTTGGTCTACGC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTTRNVH*QIFGLR
Trigger: GCGTAGACCAAAGATTTGCCAGTGAACATTCCTTGT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTGTAGGTATTTTCTaGCTCAAATCTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSVGIF*LKSGKV
Trigger: TACTTTCCCAGATTTGAGCCAGAAAATACCTACAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTACCTGAATTCAAAATaGCACAAAGCAATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHYLNSK*HKAILG
Trigger: TCCAAGAATTGCTTTGTGCCATTTTGAATTCAGGTA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTGGGAGGAGGTTACTTaGACAAAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFWEEVT*TKQRYF
Trigger: GAAATACCTTTGCTTTGTCCAAGTAACCTCCTCCCA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCATCATCCCTCATTTaGATTCGAATGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPSSLI*IRMHSF
Trigger: GAAAGAATGCATTCGAATTCAAATGAGGGATGATGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTTACATATTATCCATaGAGCCTCTGCAATACAAAG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFTYYP*SLCNTK
Trigger: CTTTGTATTGCAGAGGCTGCATGGATAATATGTAAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGTACTTTTGCCGGCTTaGTTTCTATTAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFVLLPA*FLLDNV
Trigger: CACATTGTCTAATAGAAACCAAGCCGGCAAAAGTAC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTCACTGGCAAATCTTTaGTCTACGCTCTACACTAAT +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSLANL*STLYTN
Trigger: ATTAGTGTAGAGCGTAGACCAAAGATTTGCCAGTGA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGATGTCACATCATTCTaGCTTATCCCTATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDVTSF*LIPIFK
Trigger: CTTAAAAATAGGGATAAGCCAGAATGATGTGACATC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTTTCCTTGAGTTGCTCTaGATGACTAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIFLELL*MTNIFR
Trigger: CCTGAAAATATTAGTCATTCAGAGCAACTCAAGGAA...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAACCCTTTCCTTCACTTaGCTAAGTTGTCTTTATTTC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTTLSFT*LSCLYF
Trigger: GAAATAAAGACAACTTAGTCAAGTGAAGGAAAGGGT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTATTGAGGGAAATCTaGAGCCTAATAGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLLREI*SLIESC
Trigger: GCAAGATTCTATTAGGCTTCAGATTTCCCTCAATAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR TCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTTTTTGTATATGGTGTaGAATAGGAGTCCAACGTCA +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFFLYMV*NRSPTS
Trigger: TGACGTTGGACTCCTATTTCACACCATATACAAAAA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTTTCTCAGAGTACCTTTaGTGTAAATGTCATGGTATA +
Preference number: 4 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCFSEYL*CKCHGI
Trigger: TATACCATGACATTTACAGCAAAGGTACTCTGAGAA...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAATTCTCACTGGTTGGTaGGAACTTTCACATATTTGT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTILTGW*ELSHIC
Trigger: ACAAATATGTGAAAGTTCCCACCAACCAGTGAGAAT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGTTCATTGGTGTTAATTaGTTCTTCCATGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQFIGVN*FFHERG
Trigger: ACCTCTCTCATGGAAGAACCAATTAACACCAATGAA...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAATCTGCATACAACATaGAGACCGATTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFNLHTT*RPIFRF
Trigger: GAATCTGAAAATCGGTCTCCATGTTGTATGCAGATT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAAGAAGGAACTAAAATaGAGCTGTTCGCAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTKKELK*SCSQFK
Trigger: TTTGAACTGCGAACAGCTCCATTTTAGTTCCTTCTT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTATCTATCTGGAATTaGTCCAGGAGCCTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTLSIWN*SRSLLN
Trigger: ATTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR GCA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGTTCTATTCTCAAATTaGATCAATTACCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNTQTMLPSIISFVGETFVLFSN*INYHLL
Trigger: CAGCAGATGGTAATTGATGCAATTTGAGAATAGAAC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp GCTTTTAGAGAAGAATATGTTATACATCGTGGGGACTaGTTACCTGCTCTAATTAGTATACTTATTCCATCA +
Preference number: 4 (lower is better)
Translates to: AFREEYVIHRGD*LPALISILIPS
Trigger: TGATGGAATAAGTATACTAATTAGAGCAGGTAACAAGTCCCCACGATGTATAACATATTCTTCTCTAAAAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
3UTR CAA 72 bp TTCATCCACGTTATAACATGTGTATCACTATGTCACTaGTCACTCCTTTTTATTGCTGAACATCATTGTTCA +
Preference number: 4 (lower is better)
Translates to: FIHVITCVSLCH*SLLFIAEHHCS
Trigger: TGAACAATGATGTTCAGCAATAAAAAGGAGTGACAAGTGACATAGTGATACACATGTTATAACGTGGATGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS GCA 90 bp ATCACATCCACCGTCTGGCAGCTGGAGGGCTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAGAGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: ITSTVWQLEGWPALR*GFLPDVAAPARGLA
Trigger: AGCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGTGGATGTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp AGGATCCATCTGACCTGGCAGCTGGAGGGCTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAGAGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RIHLTWQLEGWPALR*GFLPDVAAPARGLA
Trigger: AGCCAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS GCA 90 bp GTCTTCTGCCATCACATCCACCGTCTGGCAGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: VFCHHIHRLAAGGLA*PSVRVPAGCCCSRQ
Trigger: CTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGTGGATGTGATGGCAGAAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp CATGCCAACCAGGATCCATCTGACCTGGCAGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: HANQDPSDLAAGGLA*PSVRVPAGCCCSRQ
Trigger: CTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTGGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS CCA 90 bp GGACACATGCCAACCAGGATCCATCTGACCTGGCAGCTGGAGGGCTaGCCTGCCCTTCGGTGCGGGTTCCTGCCGGATGTTGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GHMPTRIHLTWQLEG*PALRCGFLPDVAAP
Trigger: GGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTGGCATGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS TCA 90 bp GTGGCACTCCTGGTCACAGAGGACACATGCCAACCAGGATCCATCTaGCCTGGCAGCTGGAGGGCTGGCCTGCCCTTCGGTGCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: VALLVTEDTCQPGSI*PGSWRAGLPFGAGS
Trigger: GGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTGGCATGTGTCCTCTGTGACCAGGAGTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTCGGGGCGCCACTCCTTaGGTCTGCTGCTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: RGGASEPSAHWTIPEPHARGATP*VCCLEC
Trigger: GCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCG...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS CCA 90 bp CCGGATTGCTGGGTTGGGCAGCTGAAAGCATCAGTGCCTCGGACCTaGAGTGTCGGGCACATGGAAGTGCCTCGGACCTGGAGTACTGGA +
Preference number: 5 (lower is better)
Translates to: PDCWVGQLKASVPRT*SVGHMEVPRTWSTG
Trigger: TCCAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCCAGGTCCGAGGCACTGATGCTTTCAGCTGCCCAACCCAGCAATCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS-3UTR CAA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTGCTACAACCCTAGCCTaGGGACCCCTCTGGGGCCAA +
Preference number: 5 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIATTLA*GPLWGQ
Trigger: TTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGC...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCGGGGCGCCACTCCTTaGGTCTGCTGCTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRGATP*VCCLEC
Trigger: GCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGGACCAGCCGCAGGCTaGCAGAAGTCACTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAGPAAG*QKSLAR
Trigger: ACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCC...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CCA 90 bp AGTGCCTCGGACCTGGAGTACTGGATAGGGAGCAGGACTGGAGATTaGACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SASDLEYWIGSRTGD*TMKGSVWDARSVRL
Trigger: AAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 90 bp GACCTGGAGTGTCGGGCACATGGAAGTGCCTCGGACCTGGAGTACTaGATAGGGAGCAGGACTGGAGATTGGACGATGAAGGGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: DLECRAHGSASDLEY*IGSRTGDWTMKGSV
Trigger: AACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 90 bp TGGCACCCAGCTGTTCAGAGTAGGAAGGGCCCTCTGTGGCACTCCTaGTCACAGAGGACACATGCCAACCAGGATCCATCTGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: WHPAVQSRKGPLWHS*SQRTHANQDPSDLA
Trigger: TGCCAGGTCAGATGGATCCTGGTTGGCATGTGTCCTCTGTGACCAGGAGTGCCACAGAGGGCCCTTCCTACTCTGAACAGCTGGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS CCA 90 bp ACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTATTCTCCTGGCCTTGTGCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: TMKGSVWDARSVRLL*VTTAEVFSWPCAPP
Trigger: GGGAGGGGCACAAGGCCAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673617.1
CDS-3UTR CAA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHRLAAC*VGFGVQ
Trigger: CTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCT...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATACCCAGGCTGGCTGCTaGCTTGGTAGGTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHTQAGC*LGRFWC
Trigger: ACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGT...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: TSPGAASRRETDFRAEGRRLLTD*ESLSAP
Trigger: TGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCT...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RGGASEPSAHWTIPEPHATGLRN*GPGFRK
Trigger: CTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGT...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATTCTAGCTGCCATCCCTaGCCCTATGCTCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHSSCHP*PYAQAS
Trigger: GGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGA...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTCGGGGCGCCACTCCTTaGGTCTGCTGCTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLRGATP*VCCLEC
Trigger: GCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCG...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCTGTCAGGAGCGCAGCTaGGTTTACCTGGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACCQERS*VYLGPV
Trigger: CACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACA...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp GTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGTCACTTaGCCGTCAGTGCCGCATTCTCATGGTATGTCAGGAGCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VIQGIGTSRRLAEVT*PSVPHSHGMSGAQL
Trigger: AAGCTGCGCTCCTGACATACCATGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CCA 90 bp ACATGGAAGTGCCTCGGACCTGGAGTACTGGATAGGGAGCAGGACTaGAGATTGGACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGT +
Preference number: 5 (lower is better)
Translates to: TWKCLGPGVLDREQD*RLDDEGLGLGRTEC
Trigger: ACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACTTCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 90 bp GCCCACTTTTGGCACCCAGCTGTTCAGAGTAGGAAGGGCCCTCTGTaGCACTCCTGGTCACAGAGGACACATGCCAACCAGGATCCATCT +
Preference number: 5 (lower is better)
Translates to: AHFWHPAVQSRKGPL*HSWSQRTHANQDPS
Trigger: AGATGGATCCTGGTTGGCATGTGTCCTCTGTGACCAGGAGTGCCACAGAGGGCCCTTCCTACTCTGAACAGCTGGGTGCCAAAAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTTGTTGGTGAGATCTTaGCTGGTAGACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCLLVRS*LVDPGW
Trigger: CCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACTGLRN*GPGFRK
Trigger: CTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGGGGCGCCACTCCTTaGGTCTGCTGCTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPRGATP*VCCLEC
Trigger: GCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAGATGAAGGGCTCGGTTaGGGACGCACGGAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: FFHERGDSGHWDQPQACRDEGLG*GRTECE
Trigger: CTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATC...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp GGCCCTGGCTTCAGAAAGGTTGCTCACAGACTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTTGGTCCTGTAGGAGGGACTCCTAGA +
Preference number: 5 (lower is better)
Translates to: GPGFRKVAHRLGVTQ*PMAFGLGPVGGTPR
Trigger: TCTAGGAGTCCCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 90 bp TGGATAGGGAGCAGGACTGGAGATTGGACGATGAAGGGCTCGGTTTaGGACGCACGGAGTGTGAGGCTTCTTTGGGTCACCACAGCAGAA +
Preference number: 5 (lower is better)
Translates to: WIGSRTGDWTMKGSV*DARSVRLLWVTTAE
Trigger: TTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS-3UTR CAA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSSMREVIQGIGTSRRLARLAAC*VGFGVQ
Trigger: CTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCT...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp TACTGGTACTGGGCTCCGCAATTTGGGCCCTGGCTTCAGAAAGGTTaGTCACAGACTTGGAGTCACTCAGTGCCCCATGGCTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: YWYWAPQFGPWLQKG*SQTWSHSVPHGFWP
Trigger: AGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGTACCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS GCA 90 bp TGGGGTGACAAGAGTTGCAGGCTGTTGGCTCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCATCCAAGCCCTTGGCTCTCACTTTG +
Preference number: 5 (lower is better)
Translates to: WGDKSCRLLALAAIP*PMLKLPSKPLALTL
Trigger: CAAAGTGAGAGCCAAGGGCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTTGTCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS GCA 90 bp TTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTaGAGAAGTCACTTGCCCGTCAGTGCCGCATTCTCATGGTATGTC +
Preference number: 5 (lower is better)
Translates to: FHERGDSGHWDQPQA*RSHLPVSAAFSWYV
Trigger: GACATACCATGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp CCCCTTGAAGATGAGCAGCCTGAAGGGAGAGAGGAGACGACCATGTaGTCGCCTGTTGGAGAGTACAGCTCAACTTCCTGTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLEDEQPEGREETTM*SPVGEYSSTSCRVF
Trigger: GAAGACCCTACAGGAAGTTGAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAGGCTGCTCATCTTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623364.3
CDS CCA 90 bp GTGAGCGATTTGTTCTGTTATAGGGGTGCCCATTTGGCCCACTTTTaGCACCCAGCTGTTCAGAGTAGGAAGGGCCCTCTGTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: VSDLFCYRGAHLAHF*HPAVQSRKGPLWHS
Trigger: GGAGTGCCACAGAGGGCCCTTCCTACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATAACAGAACAAATCGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGTTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: TSPGAASRRETDFRAEGRFRKLS*AGRPSS
Trigger: TGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAA...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRLAAC*VGFGVQ
Trigger: CTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGACGACTCTGCTTTTCATaGGGCTGCAGTGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: FFHERGDSGHWDQPQACRRLCFS*GCSVPA
Trigger: AGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCG...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAACGACTCTGCTTTTCATaGGGCTGCAGTGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAERLCFS*GCSVPA
Trigger: AGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCG...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAERLLTD*ESLSAP
Trigger: TGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCT...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATCTAGCTGCCATCCCTaGCCCTATGCTCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAESSCHP*PYAQAS
Trigger: GGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGA...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCKSCRL*ALAAIP
Trigger: AGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp CTGCTGGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LLDLATWATTLALGPLWGCLFEW*VPELLS
Trigger: AGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACA...GCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTA +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACRKPGD*RPKRDV
Trigger: TACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGAAAGAGAACCCGGATaGCTGGGTTGGGCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEEREPG*LGWAAE
Trigger: TTCAGCTGCCCAACCCAGCAATCCGGGTTCTCTTTC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCGACTTTCCTATCCCTaGCAGTGCCAGGACACATCC +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRLSYP*QCQDTS
Trigger: GGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTACCCAGGCTGGCTGCTaGCTTGGTAGGTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: NWFFHERGDSGHWDQPQATQAGC*LGRFWC
Trigger: ACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTGTTGGTGAGATCTTaGCTGGTAGACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLLVRS*LVDPGW
Trigger: CCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQETGLRN*GPGFRK
Trigger: CTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCATCTCTGGAGGTCTCTTaGACCGAAGATCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: GSSMREVIQGIGTSRRLASLEVS*TEDLAT
Trigger: TGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGA...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCAGCTACCAACTCTCCTaGGCACAGGATCATTGTATA +
Preference number: 5 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCSYQLS*AQDHCI
Trigger: TATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCT...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTTTTCATGGAAAGAATaGTCTGGACGTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCFSWKE*SGRGDG
Trigger: GCCATCTCCACGTCCAGACAATTCTTTCCATGAAAA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGCATATGCTGGTTGTCTTTTaGAGTGGTTGGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GPPCLSVYCAARHPQVLHMLVVF*SGWFQN
Trigger: GTTCTGGAACCAACCACTCAAAAAGACAACCAGCAT...ATGCAGCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGGGTTCCTGCCGGATGTaGCTGCTCCCGCCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGGSCRM*LLPPEA
Trigger: GGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACC...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAEECEAS*GHHSRS
Trigger: ACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTC...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGGCTTGCAGAAGTCACTaGCCCGTCAGTGCCGCATTC +
Preference number: 5 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPACRSH*PVSAAF
Trigger: GAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGC...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGACCATGTGCTCGCCTGTaGGAGAGTACAGCTCAACTT +
Preference number: 5 (lower is better)
Translates to: FFHERGDSGHWDQPQACRPCARL*ESTAQL
Trigger: AAGTTGAGCTGTACTCTCCAACAGGCGAGCACATGG...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGAGATGGGAGAATGGCTaGAGCCCAGGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALRWENG*SPGGQG
Trigger: GCCTTGACCTCCTGGGCTCAAGCCATTCTCCCATCT...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS CCA 90 bp AAGCAGCTAGATGGGAAGTACCTACTGGTACTGGGCTCCGCAATTTaGGCCCTGGCTTCAGAAAGGTTGCTCACAGACTTGGAGTCACTC +
Preference number: 5 (lower is better)
Translates to: KQLDGKYLLVLGSAI*ALASERLLTDLESL
Trigger: GAGTGACTCCAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCATCTAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 90 bp ACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTATTCTCCTTGTTGTTCTGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: TMKGSVWDARSVRLL*VTTAEVFSLLFCRP
Trigger: AGGACGACAGAACAACAAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGTTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSPGAASRRETDFRAEGRFFLLT*KENDPE
Trigger: TTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAA...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCTTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACFRKLS*AGRPSS
Trigger: TGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAA...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTTGTTGGTGAGATCTTaGCTGGTAGACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLLLVRS*LVDPGW
Trigger: CCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACAGTGGTCCGCCCTGCCTGTCTGTCTACTGTGCAGCTAGACATCCCCAGGTGCTGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TVVRPACLSTVQLDIPRCCGMLL*VRSLLV
Trigger: TACCAGCAAAGATCTCACCAACAACAACATACCACA...GCACCTGGGGATGTCTAGCTGCACAGTAGACAGACAGGCAGGGCGGACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGACCCTTGGCTCTCACTTaGTCACGGGTCACATACATA +
Preference number: 5 (lower is better)
Translates to: FFHERGDSGHWDQPQACRPLALT*SRVTYI
Trigger: TATGTATGTGACCCGTGACAAAGTGAGAGCCAAGGG...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCCTTGGCTCTCACTTaGTCACGGGTCACATACATA +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPLALT*SRVTYI
Trigger: TATGTATGTGACCCGTGACAAAGTGAGAGCCAAGGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTCTAGCTGCCATCCCTaGCCCTATGCTCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRSSCHP*PYAQAS
Trigger: GGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQKSCRL*ALAAIP
Trigger: AGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCTTCCCCTGCAGGTTaGGAAAGAGATGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSSPAG*ERDAAS
Trigger: AGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTGCAGACTGGTGGGCTaGGGATGGTGTAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASCRLVG*GWCRAG
Trigger: CCCTGCCCTACACCATCCCAAGCCCACCAGTCTGCA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLPNWVT*GRLMSS
Trigger: ACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS GCA 90 bp GTTGTTGTTGGTGAGATCTTTGCTGGTAGACCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTGCAGTGGACTAAGACTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VVVGEIFAGRPRLAA*LVGFGVQWTKTSSS
Trigger: GCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CCA 90 bp TGTTCTGTCGTCCTTAACATGAAGCGTCTATCTTGGGGTCCAGAATaGTGTCTCTGTCTTCTGCCATCACATCCACCGTCTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CSVVLNMKRLSWGPE*CLCLLPSHPPSGSW
Trigger: CCAGCTGCCAGACGGTGGATGTGATGGCAGAAGACAGAGACACCATTCTGGACCCCAAGATAGACGCTTCATGTTAAGGACGACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACATCCCCAGGTGCTGCATCAAGGAGGGAGACTGACTTCAGGGCAGAGGGGAGGAGACAAACTCCTCTTTaGATGCAAGCCACAAAACAT +
Preference number: 5 (lower is better)
Translates to: TSPGAASRRETDFRAEGRRQTPL*MQATKH
Trigger: ATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTCT...CCTCCCCTCTGCCCTGAAGTCAGTCTCCCTCCTTGATGCAGCACCTGGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp AGGGGAGGAGCCTCAGAGCCGTCTGCTCACTGGACAATTCCTGAGCCTCATGCTTGCAAAGCAGTACTTTaGCCGGCTTGGTTTCTATTA +
Preference number: 5 (lower is better)
Translates to: RGGASEPSAHWTIPEPHACKAVL*PAWFLL
Trigger: TAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCA...AGCATGAGGCTCAGGAATTGTCCAGTGAGCAGACGGCTCTGAGGCTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRLAAC*VGFGVQ
Trigger: CTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTGTTGGTGAGATCTTaGCTGGTAGACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRLLVRS*LVDPGW
Trigger: CCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNKSCRL*ALAAIP
Trigger: AGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTTCTCTGGAGGTCTCTTaGACCGAAGATCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLSLEVS*TEDLAT
Trigger: TGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGA...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTCTCAGAGTACCTTTGCTGTAGGTGTCTATTTTCTTaGGGGGCTGTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: TTLALGPLWGQFSEYLCCRCLFS*GAVPSS
Trigger: TGATGATGGCACAGCCCCCAAAGAAAATAGACACCT...ACAGCAAAGGTACTCTGAGAATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAATGCTGGTTGTCTTTTaGAGTGGTTGGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAMLVVF*SGWFQN
Trigger: GTTCTGGAACCAACCACTCAAAAAGACAACCAGCAT...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTA +
Preference number: 5 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQRKPGD*RPKRDV
Trigger: TACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCT...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGTTCCTGCCGGATGTaGCTGCTCCCGCCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIGSCRM*LLPPEA
Trigger: GGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACC...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCGCTTGCAGAAGTCACTaGCCCGTCAGTGCCGCATTC +
Preference number: 5 (lower is better)
Translates to: LVLIGSSMREVIQGIGTSACRSH*PVSAAF
Trigger: GAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGC...GCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIKLKI*AHHLAR
Trigger: CCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCGGGGTTTCTCTATATaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRGFSI*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAATATAGAGAAACCCCG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS TCA 90 bp TTCTCATGGTATGTCAGGAGCGCAGCTTGGTTTACCTGGGCCCTGTaGATCAGGGCTTCCCTCATAACGTGTCTCACGAAGAAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: FSWYVRSAAWFTWAL*IRASLITCLTKKEN
Trigger: GTTCTCTTTCTTCGTGAGACACGTTATGAGGGAAGCCCTGATTCACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACATACCATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCAGGTGGAACTCCATTaGGCATTTCTTCCAGCAATT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLQVELH*AFLPAI
Trigger: AATTGCTGGAAGAAATGCCAAATGGAGTTCCACCTG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCATTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: GSSMREVIQGIGTSRRLAFFLLT*KENDPE
Trigger: TTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAA...TGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTGTTGGTGAGATCTTaGCTGGTAGACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLLVRS*LVDPGW
Trigger: CCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTAATCAAACTCTGTTTTaGACTTGGCTTCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPINQTLF*TWLLLG
Trigger: GCCCAAAAGAAGCCAAGTCAAAAACAGAGTTTGATT...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCGATCTGCTGTTTGACTaGAGGTACTTTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRDLLFD*RYFVPG
Trigger: CCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATC...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGGATCTGCTGTTTGACTaGAGGTACTTTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALDLLFD*RYFVPG
Trigger: CCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATC...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCGACTCTGCTTTTCATaGGGCTGCAGTGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFRLCFS*GCSVPA
Trigger: AGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCG...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASTGLRN*GPGFRK
Trigger: CTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGTCTCTGGAGGTCTCTTaGACCGAAGATCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALSLEVS*TEDLAT
Trigger: TGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGA...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGATTTTCATGGAAAGAATaGTCTGGACGTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: FFHERGDSGHWDQPQACRFSWKE*SGRGDG
Trigger: GCCATCTCCACGTCCAGACAATTCTTTCCATGAAAA...TCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACGATGAAGGGCTCGGTTaGGGACGCACGGAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDDEGLG*GRTECE
Trigger: CTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATC...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCGGACCAGCCGCAGGCTaGCAGAAGTCACTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGGPAAG*QKSLAR
Trigger: ACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCC...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCGGCACAAAGCAATTCTaGGAGATAGAAATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLGTKQF*EIEIWG
Trigger: GCCCCAAATTTCTATCTCCAAGAATTGCTTTGTGCC...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCAAACTGGGTGACCTaGGGCAGGTTAATGTCAAGT +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEPNWVT*GRLMSS
Trigger: ACTTGACATTAACCTGCCCAAGGTCACCCAGTTTGG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCCTTTGCTCTTCGGGATaGTTTTGGCTATTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLCSSG*FWLFWV
Trigger: AACCCAGAATAGCCAAAACAATCCCGAAGAGCAAAG...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATTTGGCCACTTGGGCTACAACCCTAGCCTTGGGACCCCTCTGGGGCCAATTGGAACATTACAAGATTaGAAGGAACTAGGCACTGAA +
Preference number: 5 (lower is better)
Translates to: GFGHLGYNPSLGTPLGPIGTLQD*KELGTE
Trigger: TTCAGTGCCTAGTTCCTTCAAATCTTGTAATGTTCC...AATTGGCCCCAGAGGGGTCCCAAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS GCA 90 bp CTGAGGAAGCCGGGTGATTTGAGGCCGAAGAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCTGGCTTTGGGTCTGCAGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: LRKPGDLRPKRDVTT*AVILMAGFGSADLR
Trigger: TCTCAGATCTGCAGACCCAAAGCCAGCCATTAAAATCACTGCGCAAGTTGTTACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCACAATGTTTTCCTGCTaGAGAGTCCGAAGCATTTTA +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACTMFSC*RVRSIL
Trigger: TAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLFFLLT*KENDPE
Trigger: TTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGTACTTTTGCCGGCTaGGTTTCTATTAGACAATGT +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACSTFAG*VSIRQC
Trigger: ACATTGTCTAATAGAAACCAAGCCGGCAAAAGTACT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRFRKLS*AGRPSS
Trigger: TGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTRLAAC*VGFGVQ
Trigger: CTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCACCCAGGCTGGCTGCTaGCTTGGTAGGTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTTQAGC*LGRFWC
Trigger: ACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTACCCAGGCTGGCTGCTaGCTTGGTAGGTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSTQAGC*LGRFWC
Trigger: ACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAATGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAECGMLL*VRSLLV
Trigger: TACCAGCAAAGATCTCACCAACAACAACATACCACA...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAGAAGGTGTGGTATGTaGTTGTTGGTGAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLRRCGM*LLVRSL
Trigger: CAAAGATCTCACCAACAACAACATACCACACCTTCT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAATCAAACTCTGTTTTaGACTTGGCTTCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: WFFHERGDSGHWDQPQACNQTLF*TWLLLG
Trigger: GCCCAAAAGAAGCCAAGTCAAAAACAGAGTTTGATT...GCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASRLLTD*ESLSAP
Trigger: TGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGTGLRN*GPGFRK
Trigger: CTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGT...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASKSCRL*ALAAIP
Trigger: AGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTCTCTGGAGGTCTCTTaGACCGAAGATCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSLEVS*TEDLAT
Trigger: TGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGTGTCTATTTTCTTaGGGGGCTGTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRRCLFS*GAVPSS
Trigger: TGATGATGGCACAGCCCCCAAAGAAAATAGACACCT...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGGTGTCTATTTTCTTaGGGGGCTGTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQERCLFS*GAVPSS
Trigger: TGATGATGGCACAGCCCCCAAAGAAAATAGACACCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGGTTCCTGCCGGATGTaGCTGCTCCCGCCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFGSCRM*LLPPEA
Trigger: GGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGATGAAGCACTCCCTTTaGGTCTTGGGCTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEMKHSL*VLGSRK
Trigger: CTTTCTAGAGCCCAAGACCAAAAGGGAGTGCTTCAT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTCTAGAGAAAACAGGTaGTCTGCAAGCTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLSRENR*SASFAF
Trigger: GAAAGCAAAGCTTGCAGACAACCTGTTTTCTCTAGA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCATACATCGTGGGGACTaGTTACCTGCTCTAATTAGT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLIHRGD*LPALIS
Trigger: ACTAATTAGAGCAGGTAACAAGTCCCCACGATGTAT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTCAGAAGTCTCTGGGTTaGAAATGTAGGGTGATTCAA +
Preference number: 5 (lower is better)
Translates to: NWFFHERGDSGHWDQPQAQKSLG*KCRVIQ
Trigger: TTGAATCACCCTACATTTCAAACCCAGAGACTTCTG...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAAGTACTTTTGCCGGCTaGGTTTCTATTAGACAATGT +
Preference number: 5 (lower is better)
Translates to: SSMREVIQGIGTSRRLAESTFAG*VSIRQC
Trigger: ACATTGTCTAATAGAAACCAAGCCGGCAAAAGTACT...TTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTAGAAGGTGTGGTATGTaGTTGTTGGTGAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: NWFFHERGDSGHWDQPQARRCGM*LLVRSL
Trigger: CAAAGATCTCACCAACAACAACATACCACACCTTCT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCAACTCTGTTTTTGACTaGGCTTCTTTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLNSVFD*ASFGLR
Trigger: TCTTAGCCCAAAAGAAGCCAAGTCAAAAACAGAGTT...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGAGCTACCAACTCTCCTaGGCACAGGATCATTGTATA +
Preference number: 5 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRSYQLS*AQDHCI
Trigger: TATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCT...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAGCTACCAACTCTCCTaGGCACAGGATCATTGTATA +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQESYQLS*AQDHCI
Trigger: TATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGTTTTCATGGAAAGAATaGTCTGGACGTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQFSWKE*SGRGDG
Trigger: GCCATCTCCACGTCCAGACAATTCTTTCCATGAAAA...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPCLFEW*VPELLS
Trigger: AGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACA...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: VNWFFHERGDSGHWDQPQCLFEW*VPELLS
Trigger: AGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACA...CTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCGGGGCGCCACTCCTTaGGTCTGCTGCTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFRGATP*VCCLEC
Trigger: GCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTTGTCAGGAGCGCAGCTaGGTTTACCTGGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: VDSLVLIGSSMREVIQGICQERS*VYLGPV
Trigger: CACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACA...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTATAGGGGTGCCCATTaGGCCCACTTTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAYRGAH*AHFWHP
Trigger: TGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCGACTTTCCTATCCCTaGCAGTGCCAGGACACATCC +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRARLSYP*QCQDTS
Trigger: GGATGTGTCCTGGCACTGCAAGGGATAGGAAAGTCG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGGTGGGAGGAGGTTACTaGGACAAAGCAAAGGTATTT +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEVGGGY*DKAKVF
Trigger: AAATACCTTTGCTTTGTCCAAGTAACCTCCTCCCAC...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTAACTTGTCCATCATaGCAAAGAAGCCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLTCPS*QRSQLG
Trigger: TCCCAGCTGGCTTCTTTGCAATGATGGACAAGTTAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTCAGGGCTGTCGGAATaGGGTACCATGGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSGLSE*GTMGGV
Trigger: CACTCCACCCATGGTACCCAATTCCGACAGCCCTGA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS TCA 90 bp AGGCCTACACTCAGGTTCTGGATGTCCTTGCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTTTTGCCGGCTTGGTTTCTATTAGAC +
Preference number: 5 (lower is better)
Translates to: RPTLRFWMSLLLDLW*DCKAVLLPAWFLLD
Trigger: GTCTAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCAGTCTCACCACAGATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS TCA 90 bp CACCACAGCAGAAGTATTCTCCTTGTTGTTCTGTCGTCCTTAACATaGAGCGTCTATCTTGGGGTCCAGAATGGTGTCTCTGTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HHSRSILLVVLSSLT*SVYLGVQNGVSVFC
Trigger: GCAGAAGACAGAGACACCATTCTGGACCCCAAGATAGACGCTTCATGTTAAGGACGACAGAACAACAAGGAGAATACTTCTGCTGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 90 bp TTGGCACAGGATCATTGTATAGGTGTCTATTTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGTCATGATACACTCCACCCTCAGACT +
Preference number: 5 (lower is better)
Translates to: LAQDHCIGVYFLWGL*HHQSVGHDTLHPQT
Trigger: AGTCTGAGGGTGGAGTGTATCATGACCCACACTCTGATGATGGCACAGCCCCCAAAGAAAATAGACACCTATACAATGATCCTGTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 90 bp CAACTCTCCTTGGCACAGGATCATTGTATAGGTGTCTATTTTCTTTaGGGGCTGTGCCATCATCAGAGTGTGGGTCATGATACACTCCAC +
Preference number: 5 (lower is better)
Translates to: QLSLAQDHCIGVYFL*GLCHHQSVGHDTLH
Trigger: GTGGAGTGTATCATGACCCACACTCTGATGATGGCACAGCCCCCAAAGAAAATAGACACCTATACAATGATCCTGTGCCAAGGAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTAGACAAACTCCTCTTTaGATGCAAGCCACAAAACAT +
Preference number: 5 (lower is better)
Translates to: IGSSMREVIQGIGTSRRLRQTPL*MQATKH
Trigger: ATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTCT...AAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCAGGTGGAACTCCATTaGGCATTTCTTCCAGCAATT +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNQVELH*AFLPAI
Trigger: AATTGCTGGAAGAAATGCCAAATGGAGTTCCACCTG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGAAGTCTCTGGGTTaGAAATGTAGGGTGATTCAA +
Preference number: 5 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPQKSLG*KCRVIQ
Trigger: TTGAATCACCCTACATTTCAAACCCAGAGACTTCTG...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTAATTCACAGGAGGCCTTCAATTCCTAACATGGGCTCACAGTGGTCCGCCCTGCAGAAGTCTCTGGGTTaGAAATGTAGGGTGATTCAA +
Preference number: 5 (lower is better)
Translates to: LIHRRPSIPNMGSQWSALQKSLG*KCRVIQ
Trigger: TTGAATCACCCTACATTTCAAACCCAGAGACTTCTG...CAGGGCGGACCACTGTGAGCCCATGTTAGGAATTGAAGGCCTCCTGTGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTACCCAGGCTGGCTGCTaGCTTGGTAGGTTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPITQAGC*LGRFWC
Trigger: ACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCTGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: VLIGSSMREVIQGIGTSRCGMLL*VRSLLV
Trigger: TACCAGCAAAGATCTCACCAACAACAACATACCACA...GCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp AATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTAACTCTGTTTTTGACTaGGCTTCTTTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: NWFFHERGDSGHWDQPQANSVFD*ASFGLR
Trigger: TCTTAGCCCAAAAGAAGCCAAGTCAAAAACAGAGTT...AGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGATCTGCTGTTTGACTaGAGGTACTTTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASDLLFD*RYFVPG
Trigger: CCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCGACTCTGCTTTTCATaGGGCTGCAGTGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIRLCFS*GCSVPA
Trigger: AGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCGACTCTGCTTTTCATaGGGCTGCAGTGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHRLCFS*GCSVPA
Trigger: AGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIRLLTD*ESLSAP
Trigger: TGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCTAGCTGCCATCCCTaGCCCTATGCTCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISSCHP*PYAQAS
Trigger: GGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGCTACCAACTCTCCTaGGCACAGGATCATTGTATA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNSYQLS*AQDHCI
Trigger: TATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCCATTTGGCCCACTTTaGGCACCCAGCTGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHPFGPL*APSCSE
Trigger: CTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCACTCCCTTTTGGTCTaGGGCTCTAGAAAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSHSLLV*GSRKRL
Trigger: TAGCCTCTTTCTAGAGCCCAAGACCAAAAGGGAGTG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCAATCTGCCAGGCTGTaGCTTGCTTCTAAATATAAG +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEQSARL*LASKYK
Trigger: CTTATATTTAGAAGCAAGCAACAGCCTGGCAGATTG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTCGAGAGCTTAACCTaGTGGGAAATGAAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNFESLT*WEMKGF
Trigger: AAAGCCCTTCATTTCCCACAAGGTTAAGCTCTCGAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCGGGGTTTCTCTATATaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHRGFSI*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAATATAGAGAAACCCCG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCACTTGGGGCTTGGTaGCTAAGGCCCACTGACAAA +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRPLGAW*LRPTDK
Trigger: TTTGTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCTTTGCTCTTCGGGATaGTTTTGGCTATTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNLCSSG*FWLFWV
Trigger: AACCCAGAATAGCCAAAACAATCCCGAAGAGCAAAG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AGTCACATGAGATGTAGGAGATGGAGCCAAGACTCCACCCAGGCAAGCGGACTCTTGTCCCACCACTATTaGCTGAAAAGACTATTCTTT +
Preference number: 5 (lower is better)
Translates to: SHMRCRRWSQDSTQASGLLSHHY*LKRLFF
Trigger: AAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAA...GAGTCCGCTTGCCTGGGTGGAGTCTTGGCTCCATCTCCTACATCTCATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGACTGTCTCTGTAGATaGGCCTTCTGGACGTTCTAC +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASDCLCR*AFWTFY
Trigger: GTAGAACGTCCAGAAGGCCAATCTACAGAGACAGTC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CAATTCCTGAGCCTCATGCTCCTGAACGATGAAAGATGGCTCAATCTCCTCTTCCTTCCCAAGAAAGCTTaGTGCTCCCTACAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: QFLSLMLLNDERWLNLLFLPKKA*CSLQEV
Trigger: TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAG...GAAGAGGAGATTGAGCCATCTTTCATCGTTCAGGAGCATGAGGCTCAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp CCATCATCATTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCTGGATTTGGCCACTaGGGCTACAACCCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: PSSFQSLPKKALCSLQEVAGFGH*GYNPSL
Trigger: AAGGCTAGGGTTGTAGCCCAAGTGGCCAAATCCAGC...TACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAATGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTGTCCTTGAATTTCTaGATCGCCACAATTTCATGT +
Preference number: 5 (lower is better)
Translates to: LIGSSMREVIQGIGTSRRLSLNF*IATISC
Trigger: ACATGAAATTGTGGCGATCAAGAAATTCAAGGACAG...CCTGCGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSFRKLS*AGRPSS
Trigger: TGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNCGMLL*VRSLLV
Trigger: TACCAGCAAAGATCTCACCAACAACAACATACCACA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCCGAACTCTGTTTTTGACTaGGCTTCTTTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: GVNWFFHERGDSGHWDQPNSVFD*ASFGLR
Trigger: TCTTAGCCCAAAAGAAGCCAAGTCAAAAACAGAGTT...CGGCTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGAATCAAACTCTGTTTTaGACTTGGCTTCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQENQTLF*TWLLLG
Trigger: GCCCAAAAGAAGCCAAGTCAAAAACAGAGTTTGATT...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGGATCTGCTGTTTGACTaGAGGTACTTTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGDLLFD*RYFVPG
Trigger: CCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATC...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCCCTTGGCTCTCACTTaGTCACGGGTCACATACATA +
Preference number: 5 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDPLALT*SRVTYI
Trigger: TATGTATGTGACCCGTGACAAAGTGAGAGCCAAGGG...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTCTAGCTGCCATCCCTaGCCCTATGCTCAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISSSCHP*PYAQAS
Trigger: GGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIKSCRL*ALAAIP
Trigger: AGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGTGTCTATTTTCTTaGGGGGCTGTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTRCLFS*GAVPSS
Trigger: TGATGATGGCACAGCCCCCAAAGAAAATAGACACCT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTA +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIRKPGD*RPKRDV
Trigger: TACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGECEAS*GHHSRS
Trigger: ACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTC...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTCCATTTGGCCCACTTTaGGCACCCAGCTGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISPFGPL*APSCSE
Trigger: CTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGG...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGT +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSEHRDG*QDLQTG
Trigger: ACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGATGGTCCACCTCATTaGTATCATCAAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRADGPPH*YHQAAA
Trigger: GGCAGCTGCTTGATGATACAAATGAGGTGGACCATC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCAATCTGCCAGGCTGTaGCTTGCTTCTAAATATAAG +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNQSARL*LASKYK
Trigger: CTTATATTTAGAAGCAAGCAACAGCCTGGCAGATTG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACCCAATACGGACTTTTTaGCTTCTAATTGGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNPIRTF*LLIGLP
Trigger: TGGCAGACCAATTAGAAGCAAAAAAGTCCGTATTGG...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTCTCTTCGGGATTGTTTaGGCTATTCTGGGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLFGIV*AILGSL
Trigger: CAAGGAACCCAGAATAGCCAAAACAATCCCGAAGAG...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGACAAACTCCTCTTTaGATGCAAGCCACAAAACAT +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNRQTPL*MQATKH
Trigger: ATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTCT...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTAACGCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACTTTTCTTCACTGTCCTaGAATTTCTTGATCGCCACA +
Preference number: 5 (lower is better)
Translates to: VTPQSILPCVQVTSLDTNFSSLS*NFLIAT
Trigger: TGTGGCGATCAAGAAATTCAAGGACAGTGAAGAAAA...GTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGCGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCCCTTGGCTCTCACTTaGTCACGGGTCACATACATA +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRPLALT*SRVTYI
Trigger: TATGTATGTGACCCGTGACAAAGTGAGAGCCAAGGG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGCTACCAACTCTCCTaGGCACAGGATCATTGTATA +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTSYQLS*AQDHCI
Trigger: TATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCATGCTGGTTGTCTTTTaGAGTGGTTGGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTMLVVF*SGWFQN
Trigger: GTTCTGGAACCAACCACTCAAAAAGACAACCAGCAT...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTA +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRKPGD*RPKRDV
Trigger: TACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGCATTCGTGAGCGATTaGTTCTGTTATAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIAFVSD*FCYRGA
Trigger: GGCACCCCTATAACAGAACAAATCGCTCACGAATGC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGCATTCGTGAGCGATTaGTTCTGTTATAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHAFVSD*FCYRGA
Trigger: GGCACCCCTATAACAGAACAAATCGCTCACGAATGC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTCTTCCCCTGCAGGTTaGGAAAGAGATGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISSPAG*ERDAAS
Trigger: AGATGCAGCATCTCTTTCCAAACCTGCAGGGGAAGA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTATACTTGGGAGTAACTaGGGAGCTGAAAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASILGSN*GAERDQ
Trigger: CTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTAT...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTGATCATAGCTGACTaGATGCAGGGGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHLIIAD*MQGLTL
Trigger: GAGTGTCAGCCCCTGCATCAAGTCAGCTATGATCAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GCCTCAATCTATTCTCCCCTGTGTGCAAGTAACGTCCCTGGACACAAACAGGAGCCTCGAAAACACTGGTaGAAAACATTTGTAGATATC +
Preference number: 5 (lower is better)
Translates to: ASIYSPLCASNVPGHKQEPRKHW*KTFVDI
Trigger: GATATCTACAAATGTTTTCAACCAGTGTTTTCGAGG...CTCCTGTTTGTGTCCAGGGACGTTACTTGCACACAGGGGAGAATAGATTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGATCTTTCTACACACTaGCAAAGTAATCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSDLSTH*QSNPLA
Trigger: GGCCAGAGGATTACTTTGCAAGTGTGTAGAAAGATC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTCACTGCCGCAATTTaGCTGGCCCTACAAATCCAG +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFTAAI*LALQIQ
Trigger: CTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTCGAGAGCTTAACCTaGTGGGAAATGAAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSFESLT*WEMKGF
Trigger: AAAGCCCTTCATTTCCCACAAGGTTAAGCTCTCGAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGACTGTCTCTGTAGATaGGCCTTCTGGACGTTCTAC +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRDCLCR*AFWTFY
Trigger: GTAGAACGTCCAGAAGGCCAATCTACAGAGACAGTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGAAAGAGGGATTTCTaGATGCTTGGATTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGKRDF*MLGFSP
Trigger: CGGGGAGAATCCAAGCATCAAGAAATCCCTCTTTCC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS TCA 90 bp ACGGGTAGAAGAGTCAGTAAATGCGTGAAATCCAATGTGGCTTGCTaGAAAGATAGTGTGAAACCACTGGGGGTCACAGAAATTGAGGAT +
Preference number: 5 (lower is better)
Translates to: TGRRVSKCVKSNVAC*KDSVKPLGVTEIED
Trigger: ATCCTCAATTTCTGTGACCCCCAGTGGTTTCACACTATCTTTTCAGCAAGCCACATTGGATTTCACGCATTTACTGACTCTTCTACCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624700.3
ENST00000624953.1
CDS TCA 90 bp ACAGGAGTGAGCCACCATGCACGGACCCAAGACAATACACTAATTTaGAAAGAAGATTTGATGTTTCACCGTCAGTGGACCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: TGVSHHARTQDNTLI*KEDLMFHRQWTRNI
Trigger: GATGTTTCTGGTCCACTGACGGTGAAACATCAAATCTTCTTTTCAAATTAGTGTATTGTCTTGGGTCCGTGCATGGTGGCTCACTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS TCA 90 bp TGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTaGTTCCTCAAGGATCTAGAACTAGAAATACCATTTGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: WWDCKLVQPLWKSVW*FLKDLELEIPFDPA
Trigger: GGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATCACCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS-3UTR CAA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGTGGAACTCCATTaGGCATTTCTTCCAGCAATT +
Preference number: 5 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDQVELH*AFLPAI
Trigger: AATTGCTGGAAGAAATGCCAAATGGAGTTCCACCTG...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGCAGGTGGAACTCCATTaGGCATTTCTTCCAGCAATT +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGQVELH*AFLPAI
Trigger: AATTGCTGGAAGAAATGCCAAATGGAGTTCCACCTG...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFRKLS*AGRPSS
Trigger: TGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASCGMLL*VRSLLV
Trigger: TACCAGCAAAGATCTCACCAACAACAACATACCACA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAGAAGGTGTGGTATGTaGTTGTTGGTGAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSRRCGM*LLVRSL
Trigger: CAAAGATCTCACCAACAACAACATACCACACCTTCT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGATCTGCTGTTTGACTaGAGGTACTTTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISDLLFD*RYFVPG
Trigger: CCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQRLLTD*ESLSAP
Trigger: TGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCT...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGGAGAGATGTAACAACTaGCGCAGTGATTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQERCNN*RSDFNG
Trigger: GCCATTAAAATCACTGCGCAAGTTGTTACATCTCTC...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGAGAGATGTAACAACTaGCGCAGTGATTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSERCNN*RSDFNG
Trigger: GCCATTAAAATCACTGCGCAAGTTGTTACATCTCTC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTAATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGAAAGAGAACCCGGATaGCTGGGTTGGGCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: LMVDSLVLIGSSMREVIQEREPG*LGWAAE
Trigger: TTCAGCTGCCCAACCCAGCAATCCGGGTTCTCTTTC...CTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCTATAGGGGTGCCCATTaGGCCCACTTTTGGCACCCA +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFYRGAH*AHFWHP
Trigger: TGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATA...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATAAAGCTGAAAATATaGGCTCACCACTTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHIKLKI*AHHLAR
Trigger: CCGGGCCAAGTGGTGAGCCAATATTTTCAGCTTTAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGGAGCATAGAGATGGTTaGCAAGATCTGCAGACAGGT +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVREHRDG*QDLQTG
Trigger: ACCTGTCTGCAGATCTTGCAAACCATCTCTATGCTC...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATGAAGCACTCCCTTTaGGTCTTGGGCTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHMKHSL*VLGSRK
Trigger: CTTTCTAGAGCCCAAGACCAAAAGGGAGTGCTTCAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTGCCAGGCTGTTGCTaGCTTCTAAATATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRLPGCC*LLNISL
Trigger: GAGGCTTATATTTAGAAGCAAGCAACAGCCTGGCAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTAGCACTAGGACAAGCTaGTCTACCCCTGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASTRTS*STPERN
Trigger: ATTTCTTTCAGGGGTAGACAAGCTTGTCCTAGTGCT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTGGTTGTCTGCAAGCTTaGCTTTCCATTTTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSGCLQA*LSILEN
Trigger: GTTTTCCAAAATGGAAAGCAAAGCTTGCAGACAACC...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACCACTTGGGGCTTGGTaGCTAAGGCCCACTGACAAA +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTPLGAW*LRPTDK
Trigger: TTTGTCAGTGGGCCTTAGCAACCAAGCCCCAAGTGG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTGTGAGTCCTCCAACTTaGCTCTTCGGGATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIVSPPT*LFGIVL
Trigger: CAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCAC...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCCTGTCCTTGAATTTCTaGATCGCCACAATTTCATGT +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTLSLNF*IATISC
Trigger: ACATGAAATTGTGGCGATCAAGAAATTCAAGGACAG...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACCTGTCCTTGAATTTCTaGATCGCCACAATTTCATGT +
Preference number: 5 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHLSLNF*IATISC
Trigger: ACATGAAATTGTGGCGATCAAGAAATTCAAGGACAG...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCTTTTCTTCACTGTCCTaGAATTTCTTGATCGCCACA +
Preference number: 5 (lower is better)
Translates to: SLVLIGSSMREVIQGIGTFSSLS*NFLIAT
Trigger: TGTGGCGATCAAGAAATTCAAGGACAGTGAAGAAAA...GGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTTTCTTCACTGTCCTaGAATTTCTTGATCGCCACA +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSFSSLS*NFLIAT
Trigger: TGTGGCGATCAAGAAATTCAAGGACAGTGAAGAAAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTTCAAAGTCTTCCCAAGAAAGCTTTGTGCTCCCTACAGGAAGTAGCAGAGCACTTTTCTTCACTGTCCTaGAATTTCTTGATCGCCACA +
Preference number: 5 (lower is better)
Translates to: FQSLPKKALCSLQEVAEHFSSLS*NFLIAT
Trigger: TGTGGCGATCAAGAAATTCAAGGACAGTGAAGAAAA...GTGCTCTGCTACTTCCTGTAGGGAGCACAAAGCTTTCTTGGGAAGACTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGACAATGTTTTCCTGCTaGAGAGTCCGAAGCATTTTA +
Preference number: 5 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQTMFSC*RVRSIL
Trigger: TAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGT...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTACAATGTTTTCCTGCTaGAGAGTCCGAAGCATTTTA +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSTMFSC*RVRSIL
Trigger: TAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDFFLLT*KENDPE
Trigger: TTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGTGCAAAGCAGTACTTTaGCCGGCTTGGTTTCTATTA +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGCKAVL*PAWFLL
Trigger: TAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCA...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp TTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACTGCAAAGCAGTACTTTaGCCGGCTTGGTTTCTATTA +
Preference number: 5 (lower is better)
Translates to: FIGVNWFFHERGDSGHWDCKAVL*PAWFLL
Trigger: TAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCA...GTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGACCAGAATCAAACTCTGTTTTaGACTTGGCTTCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: IGVNWFFHERGDSGHWDQNQTLF*TWLLLG
Trigger: GCCCAAAAGAAGCCAAGTCAAAAACAGAGTTTGATT...CTGGTCCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTAGGTGTCTATTTTCTTaGGGGGCTGTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISRCLFS*GAVPSS
Trigger: TGATGATGGCACAGCCCCCAAAGAAAATAGACACCT...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTTTCATGGAAAGAATaGTCTGGACGTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIFSWKE*SGRGDG
Trigger: GCCATCTCCACGTCCAGACAATTCTTTCCATGAAAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHCLFEW*VPELLS
Trigger: AGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATGCTGGTTGTCTTTTaGAGTGGTTGGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHMLVVF*SGWFQN
Trigger: GTTCTGGAACCAACCACTCAAAAAGACAACCAGCAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGATGCTGGTTGTCTTTTaGAGTGGTTGGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRMLVVF*SGWFQN
Trigger: GTTCTGGAACCAACCACTCAAAAAGACAACCAGCAT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGGAGAGATGTAACAACTaGCGCAGTGATTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGERCNN*RSDFNG
Trigger: GCCATTAAAATCACTGCGCAAGTTGTTACATCTCTC...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTATACTTGGGAGTAACTaGGGAGCTGAAAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIILGSN*GAERDQ
Trigger: CTGATCTCTTTCAGCTCCCAAGTTACTCCCAAGTAT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGAATCACATTGAGCCATaGCCCTTGCTGAAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRNHIEP*PLLKEF
Trigger: GAACTCTTTCAGCAAGGGCAATGGCTCAATGTGATT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCACTATTTTCTGACTaGGTTCAGTGTACCCTACCA +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASLFSD*VQCTLP
Trigger: TGGTAGGGTACACTGAACCAAGTCAGAAAATAGTGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTGGACACTTACAACCTTaGTACTGTCTTTTCTATGTC +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASGHLQP*YCLFYV
Trigger: GACATAGAAAAGACAGTACAAAGGTTGTAAGTGTCC...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCTAGAGAAAACAGGTaGTCTGCAAGCTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASRENR*SASFAF
Trigger: GAAAGCAAAGCTTGCAGACAACCTGTTTTCTCTAGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACGGCACAAAGCAATTCTaGGAGATAGAAATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHGTKQF*EIEIWG
Trigger: GCCCCAAATTTCTATCTCCAAGAATTGCTTTGTGCC...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTCCCATCATCCCTCATTaGAATTCGAATGCATTCTTT +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSPIIPH*NSNAFF
Trigger: AAAGAATGCATTCGAATTCAAATGAGGGATGATGGG...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGCACTTAGCACAAGATaGGCCTCTCTTCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTALSTR*ASLPIL
Trigger: GAGGATGGGAAGAGAGGCCAATCTTGTGCTAAGTGC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAGCTTACAAGGACTGTaGCTTCCCCTGTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSLQGL*LPLWSQ
Trigger: TTGGGACCACAGGGGAAGCAACAGTCCTTGTAAGCT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTGTGAGTCCTCCAACTTaGCTCTTCGGGATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISVSPPT*LFGIVL
Trigger: CAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCAC...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTATCTCAACTGTGGTTTaGATTTGCATTTCCCTAGTG +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSISTVV*ICISLV
Trigger: CACTAGGGAAATGCAAATCAAAACCACAGTTGAGAT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTGGGTTTTCTTCACTGTCCTaGAATTTCTTGATCGCCACA +
Preference number: 5 (lower is better)
Translates to: DSLVLIGSSMREVIQGIGFSSLS*NFLIAT
Trigger: TGTGGCGATCAAGAAATTCAAGGACAGTGAAGAAAA...CCCAATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCAGAAGTCTCTGGGTTaGAAATGTAGGGTGATTCAA +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIQKSLG*KCRVIQ
Trigger: TTGAATCACCCTACATTTCAAACCCAGAGACTTCTG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHFFLLT*KENDPE
Trigger: TTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTGCAAAGCAGTACTTTaGCCGGCTTGGTTTCTATTA +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHCKAVL*PAWFLL
Trigger: TAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATGGTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCAGAAGGTGTGGTATGTaGTTGTTGGTGAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: MVDSLVLIGSSMREVIQGRRCGM*LLVRSL
Trigger: CAAAGATCTCACCAACAACAACATACCACACCTTCT...GCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379989.6
CDS-3UTR CAA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTCCCTTGGCTCTCACTTaGTCACGGGTCACATACATA +
Preference number: 5 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIPLALT*SRVTYI
Trigger: TATGTATGTGACCCGTGACAAAGTGAGAGCCAAGGG...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTTTCATGGAAAGAATaGTCTGGACGTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFSWKE*SGRGDG
Trigger: GCCATCTCCACGTCCAGACAATTCTTTCCATGAAAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISCLFEW*VPELLS
Trigger: AGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCACTCCCTTTTGGTCTaGGGCTCTAGAAAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFHSLLV*GSRKRL
Trigger: TAGCCTCTTTCTAGAGCCCAAGACCAAAAGGGAGTG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTCACTATTTTCTGACTaGGTTCAGTGTACCCTACCA +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRSLFSD*VQCTLP
Trigger: TGGTAGGGTACACTGAACCAAGTCAGAAAATAGTGA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCAGGCTTTTAAGTCTTaGAGAGGATCTTCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRQAFKS*RGSSCE
Trigger: CTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCTG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACCAGGCTTTTAAGTCTTaGAGAGGATCTTCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHQAFKS*RGSSCE
Trigger: CTCACAAGAAGATCCTCTCAAAGACTTAAAAGCCTG...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTCACTGCCGCAATTTaGCTGGCCCTACAAATCCAG +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTFTAAI*LALQIQ
Trigger: CTGGATTTGTAGGGCCAGCAAAATTGCGGCAGTGAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCCCATCATCCCTCATTaGAATTCGAATGCATTCTTT +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAPIIPH*NSNAFF
Trigger: AAAGAATGCATTCGAATTCAAATGAGGGATGATGGG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTTTCAGCTCCTACCCTTaGTTTAGAAAGAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSFSSYP*FRKRKK
Trigger: TTTCTTTCTCTTTCTAAACAAAGGGTAGGAGCTGAA...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTGGGGCATGTGAGTCCTCCAACTTTGCTCTTCGGGATTGTTTTGGCTATTCTAAGCCTAATAGAATCTaGCTGTCAAACACACAAACT +
Preference number: 5 (lower is better)
Translates to: IGACESSNFALRDCFGYSKPNRI*LSNTQT
Trigger: AGTTTGTGTGTTTGACAGCAAGATTCTATTAGGCTT...AGAATAGCCAAAACAATCCCGAAGAGCAAAGTTGGAGGACTCACATGCCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAGCTGGGATTTCACATaGGAAACTGCTCAATACTTC +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPISWDFT*ETAQYF
Trigger: GAAGTATTGAGCAGTTTCCAATGTGAAATCCCAGCT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTATTTTTCTCTTTGCTaGTGCCTTTGGTGTCATATC +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASYFSLC*CLWCHI
Trigger: GATATGACACCAAAGGCACAAGCAAAGAGAAAAATA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTATCTCAACTGTGGTTTaGATTTGCATTTCCCTAGTG +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAISTVV*ICISLV
Trigger: CACTAGGGAAATGCAAATCAAAACCACAGTTGAGAT...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTTCCATTGATGGATATTaGGGTTTCCACTCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRASIDGY*GFHSLA
Trigger: AGCTAAAGAGTGGAAACCCAAATATCCATCAATGGA...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTTAAGCCCAACCTTACAGGGCTGATACGAAGATCAAATAGGCTACGTGCATCTTTATCCATTCATCCATaGATGGATATTTGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LKPNLTGLIRRSNRLRASLSIHP*MDIWVS
Trigger: GGAAACCCAAATATCCATCAATGGATGAATGGATAA...AGATGCACGTAGCCTATTTGATCTTCGTATCAGCCCTGTAAGGTTGGGCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCTGTCCTTGAATTTCTaGATCGCCACAATTTCATGT +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRLSLNF*IATISC
Trigger: ACATGAAATTGTGGCGATCAAGAAATTCAAGGACAG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTCTGTCCTTGAATTTCTaGATCGCCACAATTTCATGT +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILSLNF*IATISC
Trigger: ACATGAAATTGTGGCGATCAAGAAATTCAAGGACAG...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGACAATGTTTTCCTGCTaGAGAGTCCGAAGCATTTTA +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRTMFSC*RVRSIL
Trigger: TAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGT...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp AATTGGTATAACACGATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTCAGGTGGAACTCCATTaGGCATTTCTTCCAGCAATT +
Preference number: 5 (lower is better)
Translates to: NWYNTMRLLVIFIALTTCQVELH*AFLPAI
Trigger: AATTGCTGGAAGAAATGCCAAATGGAGTTCCACCTG...ACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCATCGTGTTATACCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACAGTACTTTTGCCGGCTaGGTTTCTATTAGACAATGT +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHSTFAG*VSIRQC
Trigger: ACATTGTCTAATAGAAACCAAGCCGGCAAAAGTACT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTGCCAGGCTGTTGCTaGCTTCTAAATATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLPGCC*LLNISL
Trigger: GAGGCTTATATTTAGAAGCAAGCAACAGCCTGGCAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATTGAGCCATTGCCCTaGCTGAAAGAGTTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFIEPLP*LKEFSH
Trigger: GTGACTGAACTCTTTCAGCAAGGGCAATGGCTCAAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCTAACTTGTCCATCATaGCAAAGAAGCCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFLTCPS*QRSQLG
Trigger: TCCCAGCTGGCTTCTTTGCAATGATGGACAAGTTAG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTCATGTCAAGAGCACATaGTTATTTATCCATTCATCC +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAHVKST*LFIHSS
Trigger: GGATGAATGGATAAATAACAATGTGCTCTTGACATG...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATTCCAAAGGAGGATCGAAATAGGAACCAAGGATCAAATGGGGTTTCGAGAGCTGTATCACTATGTCACTaGTCACTCCTTTTTATTGCT +
Preference number: 5 (lower is better)
Translates to: IPKEDRNRNQGSNGVSRAVSLCH*SLLFIA
Trigger: AGCAATAAAAAGGAGTGACAAGTGACATAGTGATAC...AGCTCTCGAAACCCCATTTGATCCTTGGTTCCTATTTCGATCCTCCTTTGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGAGACATGGAAAGCACTaGGAAATTCACAGCCAATCA +
Preference number: 5 (lower is better)
Translates to: TLQDLKELGTETQGKWLQRHGKH*EIHSQS
Trigger: TGATTGGCTGTGAATTTCCAAGTGCTTTCCATGTCT...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS TCA 90 bp CAAAAGAACTTCTCAGAAAGCTGTGCAGTAAGATCCAAAACCGTCTaGAGGAAGAAATTCTCACTGGTTGGTGGGAACTTTCACATATTT +
Preference number: 5 (lower is better)
Translates to: QKNFSESCAVRSKTV*RKKFSLVGGNFHIF
Trigger: AAATATGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCCTTCAGACGGTTTTGGATCTTACTGCACAGCTTTCTGAGAAGTTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623364.3
ENST00000623535.2
ENST00000624700.3
ENST00000624953.1
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS-3UTR CAA 90 bp GTTGATTCATTGGTGTTAATTGGTTCTTCCATGAGAGAGGTGATTCAGGGCATTAGACAAACTCCTCTTTaGATGCAAGCCACAAAACAT +
Preference number: 5 (lower is better)
Translates to: VDSLVLIGSSMREVIQGIRQTPL*MQATKH
Trigger: ATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTCT...AATGCCCTGAATCACCTCTCTCATGGAAGAACCAATTAACACCAATGAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS-3UTR CAA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGACAATGTTTTCCTGCTaGAGAGTCCGAAGCATTTTA +
Preference number: 5 (lower is better)
Translates to: TLQDLKELGTETQGKWLQTMFSC*RVRSIL
Trigger: TAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGT...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp ACATTACAAGATTTGAAGGAACTAGGCACTGAAACCCAAGGTAAATGGCTTCAGAACTCTGTTTTTGACTaGGCTTCTTTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: TLQDLKELGTETQGKWLQNSVFD*ASFGLR
Trigger: TCTTAGCCCAAAAGAAGCCAAGTCAAAAACAGAGTT...CTGAAGCCATTTACCTTGGGTTTCAGTGCCTAGTTCCTTCAAATCTTGTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTCAAAGGGATACTCTaGGATTACAATAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISFKGIL*DYNKPH
Trigger: GTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGATCTTTCTACACACTaGCAAAGTAATCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTDLSTH*QSNPLA
Trigger: GGCCAGAGGATTACTTTGCAAGTGTGTAGAAAGATC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAATCACATTGAGCCATaGCCCTTGCTGAAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTNHIEP*PLLKEF
Trigger: GAACTCTTTCAGCAAGGGCAATGGCTCAATGTGATT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTAGGGACTTCTTTTTCTaGTATGGTTTCTTACTCATC +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPIRDFFF*YGFLLI
Trigger: GATGAGTAAGAAACCATACAAGAAAAAGAAGTCCCT...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACATGAAGGCCTACCATTaGTATCGTACATTCAATTCA +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHMKAYH*YRTFNS
Trigger: TGAATTGAATGTACGATACAAATGGTAGGCCTTCAT...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGTTCAGCTCCTACCCTTaGTTTAGAAAGAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRFSSYP*FRKRKK
Trigger: TTTCTTTCTCTTTCTAAACAAAGGGTAGGAGCTGAA...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTGGGAGGAGGTTACTaGGACAAAGCAAAGGTATTT +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVGGGY*DKAKVF
Trigger: AAATACCTTTGCTTTGTCCAAGTAACCTCCTCCCAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GGATATCCAGTTGTCCCACCACTATTTGCTGAAAAGACTATTCTTTCCCCCATTTTGTCCCACCACTATTaGCTGAAAAGACTATTCTTT +
Preference number: 5 (lower is better)
Translates to: GYPVVPPLFAEKTILSPILSHHY*LKRLFF
Trigger: AAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAA...AATGGGGGAAAGAATAGTCTTTTCAGCAAATAGTGGTGGGACAACTGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CCTACCACATTCCAAAGTTCACAAAAGTATGAGTCTGTGGATCTTAGAACCCACTATTTTTCTCTTTGCTaGTGCCTTTGGTGTCATATC +
Preference number: 5 (lower is better)
Translates to: PTTFQSSQKYESVDLRTHYFSLC*CLWCHI
Trigger: GATATGACACCAAAGGCACAAGCAAAGAGAAAAATA...GTGGGTTCTAAGATCCACAGACTCATACTTTTGTGAACTTTGGAATGTGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp CTAGAGACTGACAGCATAGCTCTGAGCTTAGAATTAAAGTACAACTGCGTAAGGCGTTGGTGGAATCTGTaGTTTGAGATTTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LETDSIALSLELKYNCVRRWWNL*FEISSF
Trigger: AAAAGAAGAAATCTCAAACAACAGATTCCACCAACG...CCTTACGCAGTTGTACTTTAATTCTAAGCTCAGAGCTATGCTGTCAGTCTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674046.1
CDS TCA 90 bp GTCAGTGTGGTGATTCCTCAAGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACCAGGTATATAAAGGATTATAAATCA +
Preference number: 5 (lower is better)
Translates to: VSVVIPQGSRTRNTI*PSHPITRYIKDYKS
Trigger: TGATTTATAATCCTTTATATACCTGGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATCACCACACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCAGAAGTCTCTGGGTTaGAAATGTAGGGTGATTCAA +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFQKSLG*KCRVIQ
Trigger: TTGAATCACCCTACATTTCAAACCCAGAGACTTCTG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATGCAAAGCAGTACTTTaGCCGGCTTGGTTTCTATTA +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTCKAVL*PAWFLL
Trigger: TAATAGAAACCAAGCCGGCAAAAGTACTGCTTTGCA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTAGAAGGTGTGGTATGTaGTTGTTGGTGAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: MRLLVIFIALTTCNYQAIRRCGM*LLVRSL
Trigger: CAAAGATCTCACCAACAACAACATACCACACCTTCT...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGAGAGATGTAACAACTaGCGCAGTGATTTTAATGGC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFERCNN*RSDFNG
Trigger: GCCATTAAAATCACTGCGCAAGTTGTTACATCTCTC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGGTTGTCTGCAAGCTTaGCTTTCCATTTTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTGCLQA*LSILEN
Trigger: GTTTTCCAAAATGGAAAGCAAAGCTTGCAGACAACC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCATACATCGTGGGGACTaGTTACCTGCTCTAATTAGT +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFIHRGD*LPALIS
Trigger: ACTAATTAGAGCAGGTAACAAGTCCCCACGATGTAT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGCTGGGATTTCACATaGGAAACTGCTCAATACTTC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSWDFT*ETAQYF
Trigger: GAAGTATTGAGCAGTTTCCAATGTGAAATCCCAGCT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GATGAAACTGAGGGCCTAAAACGGGTTAGTAAACTATGGCCTGTTTCTATAAGTTTATCCATTCATCCATaGATGGATATTTGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: DETEGLKRVSKLWPVSISLSIHP*MDIWVS
Trigger: GGAAACCCAAATATCCATCAATGGATGAATGGATAA...ACTTATAGAAACAGGCCATAGTTTACTAACCCGTTTTAGGCCCTCAGTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAGACAAACTCCTCTTTaGATGCAAGCCACAAAACAT +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTRQTPL*MQATKH
Trigger: ATGTTTTGTGGCTTGCATCAAAAGAGGAGTTTGTCT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp ATGAGACTCCTGGTGATTTTTATAGCCTTGACCACATGTAACTATCAAGCAATTAGTACTTTTGCCGGCTaGGTTTCTATTAGACAATGT +
Preference number: 5 (lower is better)
Translates to: MRLLVIFIALTTCNYQAISTFAG*VSIRQC
Trigger: ACATTGTCTAATAGAAACCAAGCCGGCAAAAGTACT...AATTGCTTGATAGTTACATGTGGTCAAGGCTATAAAAATCACCAGGAGTCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAGTACTTTTGCCGGCTaGGTTTCTATTAGACAATGT +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFSTFAG*VSIRQC
Trigger: ACATTGTCTAATAGAAACCAAGCCGGCAAAAGTACT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAACTCTGTTTTTGACTaGGCTTCTTTTGGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFNSVFD*ASFGLR
Trigger: TCTTAGCCCAAAAGAAGCCAAGTCAAAAACAGAGTT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCAATCAAACTCTGTTTTaGACTTGGCTTCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFNQTLF*TWLLLG
Trigger: GCCCAAAAGAAGCCAAGTCAAAAACAGAGTTTGATT...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTCAAAGGGATACTCTaGGATTACAATAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTFKGIL*DYNKPH
Trigger: GTGGGGTTTATTGTAATCCAAGAGTATCCCTTTGAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCGGACACTTACAACCTTaGTACTGTCTTTTCTATGTC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFGHLQP*YCLFYV
Trigger: GACATAGAAAAGACAGTACAAAGGTTGTAAGTGTCC...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATCCATTGATGGATATTaGGGTTTCCACTCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTSIDGY*GFHSLA
Trigger: AGCTAAAGAGTGGAAACCCAAATATCCATCAATGGA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACATTTATCTATCTGGAATaGCTCCAGGAGCCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTFIYLE*LQEPFK
Trigger: TTTAAAAGGCTCCTGGAGCAATTCCAGATAGATAAA...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp TCAAACACACAAACTATGCTTCCAAGTATCATTTCTTTTGTGGGGGAAACTTTCCCTCGAAAACACTGGTaGAAAACATTTGTAGATATC +
Preference number: 5 (lower is better)
Translates to: SNTQTMLPSIISFVGETFPRKHW*KTFVDI
Trigger: GATATCTACAAATGTTTTCAACCAGTGTTTTCGAGG...GAAAGTTTCCCCCACAAAAGAAATGATACTTGGAAGCATAGTTTGTGTGTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAAAGCCTAATAGAATCTaGCTGTCAAACACACAAACT +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTKPNRI*LSNTQT
Trigger: AGTTTGTGTGTTTGACAGCAAGATTCTATTAGGCTT...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACACATGTCAAGAGCACATaGTTATTTATCCATTCATCC +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTHVKST*LFIHSS
Trigger: GGATGAATGGATAAATAACAATGTGCTCTTGACATG...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS-3UTR CAA 90 bp GTCCTTTCTACCATGGATGGCAATCTTTGTGATGTCAGTAATTTTTCATCAACAGTATCACTATGTCACTaGTCACTCCTTTTTATTGCT +
Preference number: 5 (lower is better)
Translates to: VLSTMDGNLCDVSNFSSTVSLCH*SLLFIA
Trigger: AGCAATAAAAAGGAGTGACAAGTGACATAGTGATAC...TGTTGATGAAAAATTACTGACATCACAAAGATTGCCATCCATGGTAGAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS GCA 72 bp ACCGTCTGGCAGCTGGAGGGCTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAGA +
Preference number: 6 (lower is better)
Translates to: TVWQLEGWPALR*GFLPDVAAPAR
Trigger: TCTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 72 bp CTGACCTGGCAGCTGGAGGGCTGGCCTGCCCTTCGGTaGGGGTTCCTGCCGGATGTTGCTGCTCCCGCCAGA +
Preference number: 6 (lower is better)
Translates to: LTWQLEGWPALR*GFLPDVAAPAR
Trigger: TCTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS GCA 72 bp CATCACATCCACCGTCTGGCAGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCTGCCGGATGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: HHIHRLAAGGLA*PSVRVPAGCCC
Trigger: GCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGACGGTGGATGTGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 72 bp CAGGATCCATCTGACCTGGCAGCTGGAGGGCTGGCCTaGCCTTCGGTGCGGGTTCCTGCCGGATGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: QDPSDLAAGGLA*PSVRVPAGCCC
Trigger: GCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS TCA 72 bp CCGCACTATGCCAGTCGTGAACTTCACAGCATCGCCTaGAACTTGTCCGGGGGAGGTTGCGGAGCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: PHYASRELHSIA*NLSGGGCGAAG
Trigger: CCCCGCGGCTCCGCAACCTCCCCCGGACAAGTTTCAGGCGATGCTGTGAAGTTCACGACTGGCATAGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS GCA 72 bp CAGTGCCTCGGACCTGGAGTGTCGGGCACATGGAAGTaGCTCGGACCTGGAGTACTGGATAGGGAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: QCLGPGVSGTWK*LGPGVLDREQD
Trigger: GTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCCAGGTCCGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp TGGGTTGGGCAGCTGAAAGCATCAGTGCCTCGGACCTaGAGTGTCGGGCACATGGAAGTGCCTCGGACCTGG +
Preference number: 6 (lower is better)
Translates to: WVGQLKASVPRT*SVGHMEVPRTW
Trigger: CCAGGTCCGAGGCACTTCCATGTGCCCGACACTCCAGGTCCGAGGCACTGATGCTTTCAGCTGCCCAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS TCA 72 bp CGAAGAAAGAGAACCCGGATTGCTGGGTTGGGCAGCTaGAAGCATCAGTGCCTCGGACCTGGAGTGTCGGGC +
Preference number: 6 (lower is better)
Translates to: RRKRTRIAGLGS*KHQCLGPGVSG
Trigger: GCCCGACACTCCAGGTCCGAGGCACTGATGCTTTCAGCTGCCCAACCCAGCAATCCGGGTTCTCTTTCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp TGCCTCGGACCTGGAGTACTGGATAGGGAGCAGGACTaGAGATTGGACGATGAAGGGCTCGGTTTGGGACGC +
Preference number: 6 (lower is better)
Translates to: CLGPGVLDREQD*RLDDEGLGLGR
Trigger: GCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp AAGCATCAGTGCCTCGGACCTGGAGTGTCGGGCACATaGAAGTGCCTCGGACCTGGAGTACTGGATAGGGAG +
Preference number: 6 (lower is better)
Translates to: KHQCLGPGVSGT*KCLGPGVLDRE
Trigger: CTCCCTATCCAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGACACTCCAGGTCCGAGGCACTGATGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 72 bp GGACCTGGAGTACTGGATAGGGAGCAGGACTGGAGATaGGACGATGAAGGGCTCGGTTTGGGACGCACGGAG +
Preference number: 6 (lower is better)
Translates to: GPGVLDREQDWR*DDEGLGLGRTE
Trigger: CTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 72 bp GGGCATTGGGACCAGCCGCAGGCTTGCAGAAGTCACTaGCCCGTCAGTGCCGCATTCTCATGGTATGTCAGG +
Preference number: 6 (lower is better)
Translates to: GHWDQPQACRSH*PVSAAFSWYVR
Trigger: CCTGACATACCATGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCCCAATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CAA 90 bp AAGTGCCTCGGACCTGGAGTACTGGATAGGGAGCAGGACTGGAGATaGGACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: KCLGPGVLDREQDWR*DDEGLGLGRTECEA
Trigger: AGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 90 bp GGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTGCAGAAGTCACTaGCCCGTCAGTGCCGCATTCTCATGGTATGTCAGGAGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: GDSGHWDQPQACRSH*PVSAAFSWYVRSAA
Trigger: AGCTGCGCTCCTGACATACCATGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CAA 90 bp GACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGTATTCTCCTGGCCTTGTGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: DDEGLGLGRTECEAS*GHHSRSILLALCPS
Trigger: GGAGGGGCACAAGGCCAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673617.1
CDS CAA 90 bp CTGGATAGGGAGCAGGACTGGAGATTGGACGATGAAGGGCTCGGTTaGGGACGCACGGAGTGTGAGGCTTCTTTGGGTCACCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: LDREQDWRLDDEGLG*GRTECEASLGHHSR
Trigger: TCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS GCA 72 bp AGAGGTGATTCAGGGCATTGGGACCAGCCGCAGGCTTaGAGAAGTCACTTGCCCGTCAGTGCCGCATTCTCA +
Preference number: 6 (lower is better)
Translates to: RGDSGHWDQPQA*RSHLPVSAAFS
Trigger: TGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCAAGCCTGCGGCTGGTCCCAATGCCCTGAATCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CCA 72 bp AGCAGGACTGGAGATTGGACGATGAAGGGCTCGGTTTaGGACGCACGGAGTGTGAGGCTTCTTTGGGTCACC +
Preference number: 6 (lower is better)
Translates to: SRTGDWTMKGSV*DARSVRLLWVT
Trigger: GGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp GACCTGGAGTACTGGATAGGGAGCAGGACTGGAGATTaGACGATGAAGGGCTCGGTTTGGGACGCACGGAGT +
Preference number: 6 (lower is better)
Translates to: DLEYWIGSRTGD*TMKGSVWDARS
Trigger: ACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 72 bp GAGCAGGACTGGAGATTGGACGATGAAGGGCTCGGTTaGGGACGCACGGAGTGTGAGGCTTCTTTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: EQDWRLDDEGLG*GRTECEASLGH
Trigger: GTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTCCAATCTCCAGTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 72 bp GGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGTATTCTCCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GLGLGRTECEAS*GHHSRSILLAL
Trigger: CAAGGCCAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673617.1
CDS CAA 90 bp CTTGCCCGTCAGTGCCGCATTCTCATGGTATGTCAGGAGCGCAGCTaGGTTTACCTGGGCCCTGTGAATCAGGGCTTCCCTCATAACGTG +
Preference number: 6 (lower is better)
Translates to: LARQCRILMVCQERS*VYLGPVNQGFPHNV
Trigger: CACGTTATGAGGGAAGCCCTGATTCACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACATACCATGAGAATGCGGCACTGACGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS TCA 72 bp AAGGGGCCATTCTTCTTCCCCGCACTATGCCAGTCGTaGACTTCACAGCATCGCCTGAAACTTGTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: KGPFFFPALCQS*TSQHRLKLVRG
Trigger: CCCCCGGACAAGTTTCAGGCGATGCTGTGAAGTTCACGACTGGCATAGTGCGGGGAAGAAGAATGGCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635828.1
CDS GCA 72 bp GTCTATCTTGGGGTCCAGAATGGTGTCTCTGTCTTCTaGCATCACATCCACCGTCTGGCAGCTGGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: VYLGVQNGVSVF*HHIHRLAAGGL
Trigger: CAGCCCTCCAGCTGCCAGACGGTGGATGTGATGGCAGAAGACAGAGACACCATTCTGGACCCCAAGATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 72 bp CCAGACCAGCCTGAAGGGAGAGAGGAGACGACCATGTaGTCGCCTGTTGGAGAGTACAGCTGGACACCAAAA +
Preference number: 6 (lower is better)
Translates to: PDQPEGREETTM*SPVGEYSWTPK
Trigger: TTTTGGTGTCCAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAGGCTGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624953.1
CDS CCA 72 bp TGTCGGGCACATGGAAGTGCCTCGGACCTGGAGTACTaGATAGGGAGCAGGACTGGAGATTGGACGATGAAG +
Preference number: 6 (lower is better)
Translates to: CRAHGSASDLEY*IGSRTGDWTMK
Trigger: CTTCATCGTCCAATCTCCAGTCCTGCTCCCTATCCAGTACTCCAGGTCCGAGGCACTTCCATGTGCCCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp TGCAGAAGTCACTTGCCCGTCAGTGCCGCATTCTCATaGTATGTCAGGAGCGCAGCTTGGTTTACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: CRSHLPVSAAFS*YVRSAAWFTWA
Trigger: GGCCCAGGTAAACCAAGCTGCGCTCCTGACATACCATGAGAATGCGGCACTGACGGGCAAGTGACTTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CCA 72 bp GGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTATTCTCCTGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GSVWDARSVRLL*VTTAEVFSWPC
Trigger: ACAAGGCCAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673617.1
CDS CAA 72 bp CTAGCTCCAGCAAGGTTTCCATTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCAGCCCGGGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LAPARFPFRKLS*AGRPSSARGRP
Trigger: AGGCCTGCCCCGGGCTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAATGGAAACCTTGCTGGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 72 bp TGTTCTCCAGGCTGGGGTGACAAGAGTTGCAGGCTGTaGGCTCTAGCTGCCATCCCTTGCCCTATGCTCAAG +
Preference number: 6 (lower is better)
Translates to: CSPGWGDKSCRL*ALAAIPCPMLK
Trigger: CTTGAGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTTGTCACCCCAGCCTGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp AGGGCTGGAAGCGGGGATCTGAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTAACAACTTGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: RAGSGDLRKPGD*RPKRDVTTCAV
Trigger: CACTGCGCAAGTTGTTACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGATCCCCGCTTCCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000674046.1
CDS CAA 72 bp CAGTGCCGCATTCTCATGGTATGTCAGGAGCGCAGCTaGGTTTACCTGGGCCCTGTGAATCAGGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: QCRILMVCQERS*VYLGPVNQGFP
Trigger: AGGGAAGCCCTGATTCACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACATACCATGAGAATGCGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS CAA 90 bp GGACTAAGACTAGCTCCAGCAAGGTTTCCATTTAGGAAGCTTTCATaGGCAGGGAGACCTTCGTCAGCCCGGGGCAGGCCTACACTCAGG +
Preference number: 6 (lower is better)
Translates to: GLRLAPARFPFRKLS*AGRPSSARGRPTLR
Trigger: CCTGAGTGTAGGCCTGCCCCGGGCTGACGAAGGTCTCCCTGCCAATGAAAGCTTCCTAAATGGAAACCTTGCTGGAGCTAGTCTTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS TCA 72 bp GTTAAGGGCTGGAAGCGGGGATCTGAGGAAGCCGGGTaGTTTGAGGCCGAAGAGAGATGTAACAACTTGCGC +
Preference number: 6 (lower is better)
Translates to: VKGWKRGSEEAG*FEAEERCNNLR
Trigger: GCGCAAGTTGTTACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGATCCCCGCTTCCAGCCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000674046.1
CDS GCA 72 bp AAGAGTTGCAGGCTGTTGGCTCTAGCTGCCATCCCTTaGCCTATGCTCAAGCTTCCATCCAAGCCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: KSCRLLALAAIP*PMLKLPSKPLA
Trigger: AGCCAAGGGCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGCCTGCAACTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS GCA 72 bp GGTGCCTTCTCTGGAGGTCTCTTTGACCGAAGATCTTaGCACAGTCATCTCTGGAGGGAGCTGTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GAFSGGLFDRRS*HSHLWRELFSR
Trigger: CCTGGAGAACAGCTCCCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGAAGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp CTGAAGGGAGAGAGGAGACGACCATGTGCTCGCCTGTaGGAGAGTACAGCTCAACTTCCTGTAGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LKGERRRPCARL*ESTAQLPVGSS
Trigger: GGAAGACCCTACAGGAAGTTGAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000623364.3
CDS CAA 90 bp GACGATGAAGGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGTATTCTCCTTGTTGTTCTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: DDEGLGLGRTECEAS*GHHSRSILLVVLSS
Trigger: GGACGACAGAACAACAAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCCTTCATCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CAA 90 bp CAGACCAGCCTGAAGGGAGAGAGGAGACGACCATGTGCTCGCCTGTaGGAGAGTACAGCTGGACACCAAAAAGAACGGGTAGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: QTSLKGERRRPCARL*ESTAGHQKERVEES
Trigger: TGACTCTTCTACCCGTTCTTTTTGGTGTCCAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAGGCTGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624953.1
CDS TCA 72 bp TATGTCAGGAGCGCAGCTTGGTTTACCTGGGCCCTGTaGATCAGGGCTTCCCTCATAACGTGTCTCACGAAG +
Preference number: 6 (lower is better)
Translates to: YVRSAAWFTWAL*IRASLITCLTK
Trigger: CTTCGTGAGACACGTTATGAGGGAAGCCCTGATTCACAGGGCCCAGGTAAACCAAGCTGCGCTCCTGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000673617.1
CDS GCA 72 bp TTCAGAAAGGTTGCTCACAGACTTGGAGTCACTCAGTaGCCCATGGCTTTTGGCCTTGGTCCTGTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: FRKVAHRLGVTQ*PMAFGLGPVGG
Trigger: CCCTCCTACAGGACCAAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCTTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 72 bp GATGGGAAGTACCTACTGGTACTGGGCTCCGCAATTTaGGCCCTGGCTTCAGAAAGGTTGCTCACAGACTTG +
Preference number: 6 (lower is better)
Translates to: DGKYLLVLGSAI*ALASERLLTDL
Trigger: CAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 72 bp GGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTTaGGTCACCACAGCAGAAGTATTCTCCTTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: GSVWDARSVRLL*VTTAEVFSLLF
Trigger: GAACAACAAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CCA 72 bp TTGTTCTGTTATAGGGGTGCCCATTTGGCCCACTTTTaGCACCCAGCTGTTCAGAGTAGGAAGGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LFCYRGAHLAHF*HPAVQSRKGPL
Trigger: CAGAGGGCCCTTCCTACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATAACAGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS CAA 72 bp ATTTGGGCCCTGGCTTCAGAAAGGTTGCTCACAGACTaGGAGTCACTCAGTGCCCCATGGCTTTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: IWALASERLLTD*ESLSAPWLLAL
Trigger: CAAGGCCAAAAGCCATGGGGCACTGAGTGACTCCAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp GGGCTCGGTTTGGGACGCACGGAGTGTGAGGCTTCTTaGGGTCACCACAGCAGAAGTATTCTCCTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: GLGLGRTECEAS*GHHSRSILLVV
Trigger: AACAACAAGGAGAATACTTCTGCTGTGGTGACCCAAAGAAGCCTCACACTCCGTGCGTCCCAAACCGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CAA 72 bp CTGAAGGGAGAGAGGAGACGACCATGTGCTCGCCTGTaGGAGAGTACAGCTGGACACCAAAAAGAACGGGTA +
Preference number: 6 (lower is better)
Translates to: LKGERRRPCARL*ESTAGHQKERV
Trigger: TACCCGTTCTTTTTGGTGTCCAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000624700.3
ENST00000624953.1
CDS GCA 72 bp GGTGAGATCTTTGCTGGTAGACCCAGGCTGGCTGCTTaGTTGGTAGGTTTTGGTGTGCAGTGGACTAAGACT +
Preference number: 6 (lower is better)
Translates to: GEIFAGRPRLAA*LVGFGVQWTKT
Trigger: AGTCTTAGTCCACTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGTCTACCAGCAAAGATCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CCA 72 bp GATCTTCTCGGGGCGCCACTCCTTTGGTCTGCTGCTTaGAGTGCTAGCAGAATGAATGGATTTCTGCAACGT +
Preference number: 6 (lower is better)
Translates to: DLLGAPLLWSAA*SASRMNGFLQR
Trigger: ACGTTGCAGAAATCCATTCATTCTGCTAGCACTCCAAGCAGCAGACCAAAGGAGTGGCGCCCCGAGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp GAGATCTTTGCTGGTAGACCCAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAGTGGACTAAGACTAGC +
Preference number: 6 (lower is better)
Translates to: EIFAGRPRLAAC*VGFGVQWTKTS
Trigger: GCTAGTCTTAGTCCACTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGTCTACCAGCAAAGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 72 bp AGATGGGAAGTACCTACTGGTACTGGGCTCCGCAATTaGGGCCCTGGCTTCAGAAAGGTTGCTCACAGACTT +
Preference number: 6 (lower is better)
Translates to: RWEVPTGTGLRN*GPGFRKVAHRL
Trigger: AAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACTTCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 90 bp GTTGTTGGTGAGATCTTTGCTGGTAGACCCAGGCTGGCTGCTTGCTaGGTAGGTTTTGGTGTGCAGTGGACTAAGACTAGCTCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: VVGEIFAGRPRLAAC*VGFGVQWTKTSSSK
Trigger: CTTGCTGGAGCTAGTCTTAGTCCACTGCACACCAAAACCTACCAAGCAAGCAGCCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 90 bp GATTTGGCATTCGTGAGCGATTTGTTCTGTTATAGGGGTGCCCATTaGGCCCACTTTTGGCACCCAGCTGTTCAGAGTAGGAAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: DLAFVSDLFCYRGAH*AHFWHPAVQSRKGP
Trigger: AGGGCCCTTCCTACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATAACAGAACAAATCGCTCACGAATGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS CAA 90 bp AATGACTCCCTGAAGGGAGAGAGGAGACGACCATGTGCTCGCCTGTaGGAGAGTACAGCTGGACACCAAAAAGAACGGGTAGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: NDSLKGERRRPCARL*ESTAGHQKERVEES
Trigger: TGACTCTTCTACCCGTTCTTTTTGGTGTCCAGCTGTACTCTCCAACAGGCGAGCACATGGTCGTCTCCTCTCTCCCTTCAGGGAGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624700.3
CDS CAA 90 bp GAGCTGTTAAGGGCTGGAAGCGGGGATCTGAGGAAGCCGGGTGATTaGAGGCCGAAGAGAGATGTAACAACTTGCGCAGTGATTTTAATG +
Preference number: 6 (lower is better)
Translates to: ELLRAGSGDLRKPGD*RPKRDVTTCAVILM
Trigger: CATTAAAATCACTGCGCAAGTTGTTACATCTCTCTTCGGCCTCAAATCACCCGGCTTCCTCAGATCCCCGCTTCCAGCCCTTAACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000674046.1
CDS TCA 72 bp ATGAGTGGCGGTTCTGCTGAGATCTGCTGTTTGACTTaGGGTACTTTGTCCCTGGGCCTTCTGAAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: MSGGSAEICCLT*GTLSLGLLKAL
Trigger: CAAAGCCTTCAGAAGGCCCAGGGACAAAGTACCTCAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS TCA 72 bp TATGGAAGGAAGAGGTGCCTTCTCTGGAGGTCTCTTTaGCCGAAGATCTTGCCACAGTCATCTCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: YGRKRCLLWRSL*PKILPQSSLEG
Trigger: TCCCTCCAGAGATGACTGTGGCAAGATCTTCGGTCAAAGAGACCTCCAGAGAAGGCACCTCTTCCTTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp TTCGTGAGCGATTTGTTCTGTTATAGGGGTGCCCATTaGGCCCACTTTTGGCACCCAGCTGTTCAGAGTAGG +
Preference number: 6 (lower is better)
Translates to: FVSDLFCYRGAH*AHFWHPAVQSR
Trigger: CCTACTCTGAACAGCTGGGTGCCAAAAGTGGGCCAAATGGGCACCCCTATAACAGAACAAATCGCTCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS TCA 72 bp CAGTCCATAAGAAAAAGATTCGTGAGGTGCAGACAGTaGATGGGAATGGCTACTGTCCATGTGCTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: QSIRKRFVRCRQ*MGMATVHVLRQ
Trigger: CTGCCGGAGCACATGGACAGTAGCCATTCCCATTCACTGTCTGCACCTCACGAATCTTTTTCTTATGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS GCA 72 bp CCGGGTGATTTGAGGCCGAAGAGAGATGTAACAACTTaGGCAGTGATTTTAATGGCTGGCTTTGGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: PGDLRPKRDVTT*AVILMAGFGSA
Trigger: TGCAGACCCAAAGCCAGCCATTAAAATCACTGCGCAAGTTGTTACATCTCTCTTCGGCCTCAAATCACCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000623535.2
ENST00000674046.1
CDS CCA 72 bp GTCCTTAACATGAAGCGTCTATCTTGGGGTCCAGAATaGTGTCTCTGTCTTCTGCCATCACATCCACCGTCT +
Preference number: 6 (lower is better)
Translates to: VLNMKRLSWGPE*CLCLLPSHPPS
Trigger: AGACGGTGGATGTGATGGCAGAAGACAGAGACACCATTCTGGACCCCAAGATAGACGCTTCATGTTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS CAA 72 bp GCTTCTTTTGGGCTAAGAAGGTGTGGTATGTTGTTGTaGGTGAGATCTTTGCTGGTAGACCCAGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ASFGLRRCGMLL*VRSLLVDPGWL
Trigger: CAGCCAGCCTGGGTCTACCAGCAAAGATCTCACCAACAACAACATACCACACCTTCTTAGCCCAAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS TCA 72 bp CTCAGGTTCTGGATGTCCTTGCTGTTAGATCTGTGGTaGGACTGCAAAGCAGTACTTTTGCCGGCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: LRFWMSLLLDLW*DCKAVLLPAWF
Trigger: AAACCAAGCCGGCAAAAGTACTGCTTTGCAGTCTCACCACAGATCTAACAGCAAGGACATCCAGAACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CCA 72 bp TGTTGTTCTGTCGTCCTTAACATGAAGCGTCTATCTTaGGGTCCAGAATGGTGTCTCTGTCTTCTGCCATCA +
Preference number: 6 (lower is better)
Translates to: CCSVVLNMKRLS*GPEWCLCLLPS
Trigger: TGATGGCAGAAGACAGAGACACCATTCTGGACCCCAAGATAGACGCTTCATGTTAAGGACGACAGAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379989.6
ENST00000379996.7
CDS GCA 72 bp GATCATTGTATAGGTGTCTATTTTCTTTGGGGGCTGTaGCATCATCAGAGTGTGGGTCATGATACACTCCAC +
Preference number: 6 (lower is better)
Translates to: DHCIGVYFLWGL*HHQSVGHDTLH
Trigger: GTGGAGTGTATCATGACCCACACTCTGATGATGGCACAGCCCCCAAAGAAAATAGACACCTATACAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS TCA 72 bp AGAGTCAGTAAATGCGTGAAATCCAATGTGGCTTGCTaGAAAGATAGTGTGAAACCACTGGGGGTCACAGAA +
Preference number: 6 (lower is better)
Translates to: RVSKCVKSNVAC*KDSVKPLGVTE
Trigger: TTCTGTGACCCCCAGTGGTTTCACACTATCTTTTCAGCAAGCCACATTGGATTTCACGCATTTACTGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463994.4
ENST00000624700.3
ENST00000624953.1
CDS CCA 72 bp TCCATGGATCGAATGCTGGTTGTCTTTTTGAGTGGTTaGTTCCAGAACTGCTCTCTGATGGTAGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: SMDRMLVVFLSG*FQNCSLMVEKK
Trigger: TTTCTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACAACCAGCATTCGATCCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CCA 72 bp CTTTTCCATGGATCGAATGCTGGTTGTCTTTTTGAGTaGTTGGTTCCAGAACTGCTCTCTGATGGTAGAGAA +
Preference number: 6 (lower is better)
Translates to: LFHGSNAGCLFE*LVPELLSDGRE
Trigger: TTCTCTACCATCAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACAACCAGCATTCGATCCATGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp TTCCATGGATCGAATGCTGGTTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCTGATGGTAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: FHGSNAGCLFEW*VPELLSDGREE
Trigger: TTCTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACAACCAGCATTCGATCCATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 90 bp TCAGGACTTTTCCATGGATCGAATGCTGGTTGTCTTTTTGAGTGGTaGGTTCCAGAACTGCTCTCTGATGGTAGAGAAGAAACTCTAGTT +
Preference number: 6 (lower is better)
Translates to: SGLFHGSNAGCLFEW*VPELLSDGREETLV
Trigger: AACTAGAGTTTCTTCTCTACCATCAGAGAGCAGTTCTGGAACCAACCACTCAAAAAGACAACCAGCATTCGATCCATGGAAAAGTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp TGCTTTCCACATGGTAAGGTTTTCTTTTTGCTGACCTaGAAGGAGAACGATCCAGAAGTCTCTGGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: CFPHGKVFFLLT*KENDPEVSGFE
Trigger: TTCAAACCCAGAGACTTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAAAACCTTACCATGTGGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 72 bp ACAATGTGCTGCTTTCCACATGGTAAGGTTTTCTTTTaGCTGACCTTGAAGGAGAACGATCCAGAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: TMCCFPHGKVFF*LTLKENDPEVS
Trigger: AGAGACTTCTGGATCGTTCTCCTTCAAGGTCAGCAAAAAGAAAACCTTACCATGTGGAAAGCAGCACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 72 bp GTGGAGATGGCACTCTGTAAAAGCTACCAACTCTCCTaGGCACAGGATCATTGTATAGGTGTCTATTTTCTT +
Preference number: 6 (lower is better)
Translates to: VEMALCKSYQLS*AQDHCIGVYFL
Trigger: AAGAAAATAGACACCTATACAATGATCCTGTGCCAAGGAGAGTTGGTAGCTTTTACAGAGTGCCATCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000635828.1
ENST00000674046.1
CDS CAA 72 bp CTTTTAAATCATTCAGATTTGGCATTCGTGAGCGATTaGTTCTGTTATAGGGGTGCCCATTTGGCCCACTTT +
Preference number: 6 (lower is better)
Translates to: LLNHSDLAFVSD*FCYRGAHLAHF
Trigger: AAAGTGGGCCAAATGGGCACCCCTATAACAGAACAAATCGCTCACGAATGCCAAATCTGAATGATTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623535.2
ENST00000674046.1
CDS TCA 72 bp TTCATCTGCTCAGATGGAAGTGGTCCTAGCACCTTCTaGATAGTAAAAAGTTGGTCAATTTCACTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: FICSDGSGPSTF*IVKSWSISLSP
Trigger: TGGAGAAAGTGAAATTGACCAACTTTTTACTATTCAGAAGGTGCTAGGACCACTTCCATCTGAGCAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623535.2
ENST00000623610.1
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS TCA 72 bp GTGATTCCTCAAGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACCAGGTATATAAAGGAT +
Preference number: 6 (lower is better)
Translates to: VIPQGSRTRNTI*PSHPITRYIKD
Trigger: ATCCTTTATATACCTGGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS CCA 72 bp ACAGAAAACCAAATACTGCATGTTCTCACTCATAGGTaGGAAATGAACAATGAGAACACTTGGACACAGGAT +
Preference number: 6 (lower is better)
Translates to: TENQILHVLTHR*EMNNENTWTQD
Trigger: ATCCTGTGTCCAAGTGTTCTCATTGTTCATTTCCCACCTATGAGTGAGAACATGCAGTATTTGGTTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS CCA 72 bp ATCCAAAACCGTCTGAAGGAAGAAATTCTCACTGGTTaGTGGGAACTTTCACATATTTGTTCTAATCATGAA +
Preference number: 6 (lower is better)
Translates to: IQNRLKEEILTG*WELSHICSNHE
Trigger: TTCATGATTAGAACAAATATGTGAAAGTTCCCACCAACCAGTGAGAATTTCTTCCTTCAGACGGTTTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000379989.6
ENST00000379996.7
ENST00000463994.4
ENST00000623364.3
ENST00000623535.2
ENST00000624700.3
ENST00000624953.1
ENST00000635828.1
ENST00000637881.1
ENST00000674046.1
CDS CAA 90 bp TCTAAGACGCTATTTCACATATTCTCAGAAAAGTTTTGTACAAAGTaGTCAAGTCTAGGAAAGGCTGCCCAAGACAATACACTAGTTGTT +
Preference number: 6 (lower is better)
Translates to: SKTLFHIFSEKFCTK*SSLGKAAQDNTLVV
Trigger: AACAACTAGTGTATTGTCTTGGGCAGCCTTTCCTAGACTTGACAACTTTGTACAAAACTTTTCTGAGAATATGTGAAATAGCGTCTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS CAA 72 bp CTATTTCACATATTCTCAGAAAAGTTTTGTACAAAGTaGTCAAGTCTAGGAAAGGCTGCCCAAGACAATACA +
Preference number: 6 (lower is better)
Translates to: LFHIFSEKFCTK*SSLGKAAQDNT
Trigger: TGTATTGTCTTGGGCAGCCTTTCCTAGACTTGACAACTTTGTACAAAACTTTTCTGAGAATATGTGAAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623610.1
CDS CAA 72 bp GTTTTCAGGGCTTTCCTCAAATCACTACAAATATGTTaGTTCAACATTCATACATTTGGTATATTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: VFRAFLKSLQIC*FNIHTFGIFGG
Trigger: TCCCCCAAATATACCAAATGTATGAATGTTGAACAAACATATTTGTAGTGATTTGAGGAAAGCCCTGAAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623610.1