RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000006837

Ensembl transcript IDs: ENST00000265334.9, ENST00000518990.5, ENST00000519312.5, ENST00000520592.1, ENST00000520693.5, ENST00000521118.5, ENST00000521755.1, ENST00000522501.1, ENST00000523054.5

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGTCTGTCTTCATGCCGCTGATAAAGACGTACCTGATAGTTAGCTaGGAGCAAATATTTGTGAAAATAGGACAGCAGGCAGACAGCAGA +
Preference number: 1 (lower is better)
Translates to: WSVFMPLIKTYLIVS*EQIFVKIGQQADSR
Trigger: TCTGCTGTCTGCCTGCTGTCCTATTTTCACAAATATTTGCTCTCAGCTAACTATCAGGTACGTCTTTATCAGCGGCATGAAGACAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR TCA 90 bp GTCTCTAGAAAGTTCCAAACTTTCCCACATTTTCCTGTCTTCTTCTaGGCTCTCCAAACTGTTCAAACCTCTGCCTGTTACCCAGTTCCA +
Preference number: 1 (lower is better)
Translates to: VSRKFQTFPHFPVFF*ALQTVQTSACYPVP
Trigger: TGGAACTGGGTAACAGGCAGAGGTTTGAACAGTTTGGAGAGCTCAGAAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTTTCTAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR GCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATCTTTTCAGCAATaGCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: PVPKLLPHFWVSFQQ*PTLLVPIHCIGLSS
Trigger: TGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR GCA 90 bp ACATTTTCCTGTCTTCTTCTGAGCTCTCCAAACTGTTCAAACCTCTaGCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATC +
Preference number: 1 (lower is better)
Translates to: TFSCLLLSSPNCSNL*LLPSSKVASTFLGI
Trigger: GATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGAACAGTTTGGAGAGCTCAGAAGAAGACAGGAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR CCA 90 bp GGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTaGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCAAG +
Preference number: 1 (lower is better)
Translates to: GIDRVWWFNGYKFCI*RHRMNIFICILLTK
Trigger: CTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR CCA 90 bp TTCTTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATGAAC +
Preference number: 1 (lower is better)
Translates to: FFQAITVSAGIDRVW*FNGYKFCIWRHRMN
Trigger: GTTCATCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR CCA 90 bp ATTTTCTTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATG +
Preference number: 1 (lower is better)
Translates to: IFFQAITVSAGIDRV*WFNGYKFCIWRHRM
Trigger: CATCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR TCA 90 bp TATTATTTAGGTTTCTTCTCTGTTACAGCTCACCTCACACTGGGGTaGAAGAGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTA +
Preference number: 1 (lower is better)
Translates to: YYLGFFSVTAHLTLG*KRFELRFAAIKLLL
Trigger: TAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTGAGCTGTAACAGAGAAGAAACCTAAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
3UTR-3UTR CCA 90 bp CCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 2 (lower is better)
Translates to: PHSTGTNSLYWSVFMPLIALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...TATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR TCA 90 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 2 (lower is better)
Translates to: QAITVSAGIDRVWWFNGYSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...GTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR TCA 90 bp AGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: RLMGGIVTEPPQCGFSFKGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...CTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR TCA 90 bp CTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACGCCATTTGGTCACTGTaGCCTGTTCGCTCATTAAAT +
Preference number: 2 (lower is better)
Translates to: LYWYQFTVLVCLHAADKDAIWSL*PVRSLN
Trigger: ATTTAATGAGCGAACAGGTCACAGTGACCAAATGGC...GTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CCA 90 bp CATTTGGCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 2 (lower is better)
Translates to: HLALNRTWILLPAIRHNLALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...CAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR TCA 90 bp CTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: LGLIGFGGSMVTSFVSGDGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...GTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp CCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATACTTTCCTGTCAGATCTaGAAAAATTCAGCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: PHSTGTNSLYWSVFMPLILSCQI*KNSASF
Trigger: AAAGGAAGCTGAATTTTTCCAGATCTGACAGGAAAG...TATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR TCA 90 bp ATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 2 (lower is better)
Translates to: IVTEPPQCGFSFKPLQLVSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...CACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR TCA 90 bp ACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 2 (lower is better)
Translates to: TVSAGIDRVWWFNGYKFCSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...ACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR TCA 90 bp CTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 2 (lower is better)
Translates to: LRFAAIKLLLVRLMGGIVSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...GACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR GCA 90 bp GATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: DGWHCHRTSAMWIFFQAIMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp CTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 2 (lower is better)
Translates to: LGLIGFGGSMVTSFVSGDGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...GTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TATACCCTTCTCCATTTGGCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: YTLLHLALNRTWILLPAIRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CCA 90 bp TTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCCATTTGGCTTTGCAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 2 (lower is better)
Translates to: LVTVTCSLIKYTLLHLALQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...CAAAGCCAAATGGAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR CAA 90 bp CCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGA +
Preference number: 2 (lower is better)
Translates to: PQCGFSFKPLQLVLG*IGFGGSMVTSFVSG
Trigger: TCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR GCA 90 bp GGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGTCCAATAGATTGTGAAATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: GPGSSCLLLGITCPIDCEMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...TTCACAATCTATTGGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CCA 90 bp TCAAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATCTGTGACAGGCAATTCTaGAAAATGGAATTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: SNLCLLPSSKVASTFLGICDRQF*KMEFFP
Trigger: AGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACA...GATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR CAA 90 bp AGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATaGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCT +
Preference number: 2 (lower is better)
Translates to: RFELRFAAIKLLLVR*MGGIVTEPPQCGFS
Trigger: AGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR GCA 90 bp TGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCTATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: CHRTSAMWIFFQAITVSAMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...AGCACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp CTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 2 (lower is better)
Translates to: LGLIGFGGSMVTSFVSGDGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...GTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCTGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 2 (lower is better)
Translates to: CHRTSAMWIFFQAITVSAGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...AGCACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp CTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 2 (lower is better)
Translates to: LYWYQFTVLVCLHAADKDIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...GTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CCA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGAGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 2 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 2 (lower is better)
Translates to: FAAIKLLLVRLMGGIVTEQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...TTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR TCA 90 bp ATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 2 (lower is better)
Translates to: IVTEPPQCGFSFKPLQLVERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...CACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 2 (lower is better)
Translates to: FQAITVSAGIDRVWWFNGIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...ACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp AAGTTTTGTATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 2 (lower is better)
Translates to: KFCIWRHRMNIFICILLTGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...GGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp GGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: GLIGFGGSMVTSFVSGDIRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...TATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAAAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: FAAIKLLLVRLMGGIVTERTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...TTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR GCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CCA 90 bp TTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAAGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 2 (lower is better)
Translates to: FAAIKLLLVRLMGGIVTEGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...TTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR CCA 72 bp GCAATGCCCCACTCTACTGGTACCAATTCACTGTATTaGTCTGTCTTCATGCCGCTGATAAAGACGTACCTC +
Preference number: 3 (lower is better)
Translates to: AMPHSTGTNSLY*SVFMPLIKTYL
Trigger: GAGGTACGTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519312.5
3UTR CCA 72 bp GCAATGCCCCACTCTACTGGTACCAATTCACTGTATTaGTCTGTCTTCATGCCGCTGATAAAGACGTACCTG +
Preference number: 3 (lower is better)
Translates to: AMPHSTGTNSLY*SVFMPLIKTYL
Trigger: CAGGTACGTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR-3UTR CAA 90 bp AGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: RLMGGIVTEPPQCGFSFKQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...CTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR TCA 72 bp GGTTTCTTCTCTGTTACAGCTCACCTCACACTGGGGTaGAAGAGATTTGAACTGAGATTTGCAGCCATCAAA +
Preference number: 3 (lower is better)
Translates to: GFFSVTAHLTLG*KRFELRFAAIK
Trigger: TTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTGAGCTGTAACAGAGAAGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
3UTR GCA 72 bp CTGTTCAAACCTCTGCCTGTTACCCAGTTCCAAAGTTaGTTCCACATTTTTGGGTATCTTTTCAGCAATGCC +
Preference number: 3 (lower is better)
Translates to: LFKPLPVTQFQS*FHIFGYLFSNA
Trigger: GGCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR GCA 72 bp TGTCTTCTTCTGAGCTCTCCAAACTGTTCAAACCTCTaGCTGTTACCCAGTTCCAAAGTTGCTTCCACATTT +
Preference number: 3 (lower is better)
Translates to: CLLLSSPNCSNL*LLPSSKVASTF
Trigger: AAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGAACAGTTTGGAGAGCTCAGAAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR-3UTR CAA 90 bp CTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACTCCTTTTGTTCTCATTaGCCATTTGGTCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: LYWYQFTVLVCLHAADKDSFCSH*PFGHCD
Trigger: GTCACAGTGACCAAATGGCAAATGAGAACAAAAGGA...GTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR CCA 72 bp AAATATACCCTTCTCCATTTGGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATTAGGCATAACTTGTCC +
Preference number: 3 (lower is better)
Translates to: KYTLLHLALNRT*ILLPAIRHNLS
Trigger: GGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAGGGTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CAA 90 bp GCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGTCCAATTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 3 (lower is better)
Translates to: ALNRTWILLPAIRHNLSNLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...ATTGGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR-3UTR CAA 90 bp TCTTTTGACTGTATTGTGACAGGCAATTCTGGAAAATGGAATTCTTTCCTGTCAAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAAC +
Preference number: 3 (lower is better)
Translates to: SFDCIVTGNSGKWNSFLSRTWIL*PAIRHN
Trigger: GTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCT...TGACAGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR TCA 72 bp TGTTACAGCTCACCTCACACTGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCATCAAATTACTGTTAGT +
Preference number: 3 (lower is better)
Translates to: CYSSPHTGVKEI*TEICSHQITVS
Trigger: ACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTGAGCTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
3UTR TCA 72 bp TTCATGCCGCTGATAAAGACGTACCTGATAGTTAGCTaGGAGCAAATATTTGTGAAAATAGGACAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: FMPLIKTYLIVS*EQIFVKIGQQA
Trigger: TGCCTGCTGTCCTATTTTCACAAATATTTGCTCTCAGCTAACTATCAGGTACGTCTTTATCAGCGGCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520693.5
3UTR GCA 72 bp AAGTTGCTTCCACATTTTTGGGTATCTTTTCAGCAATaGCCCACTCTACTGGTACCAATTCACTGTATTGGT +
Preference number: 3 (lower is better)
Translates to: KLLPHFWVSFQQ*PTLLVPIHCIG
Trigger: ACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR CCA 72 bp GCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTTTGTATCTGGAGACAT +
Preference number: 3 (lower is better)
Translates to: AITVSAGIDRVW*FNGYKFCIWRH
Trigger: ATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR CCA 72 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGA +
Preference number: 3 (lower is better)
Translates to: QAITVSAGIDRV*WFNGYKFCIWR
Trigger: TCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CAA 90 bp GTATTATTTAGGTTTCTTCTCTGTTACAGCTCACCTCACACTGGGGTGAAAGAGTTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 3 (lower is better)
Translates to: VLFRFLLCYSSPHTGVKELITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...CTCTTTCACCCCAGTGTGAGGTGAGCTGTAACAGAGAAGAAACCTAAATAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520592.1
3UTR-3UTR CAA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 3 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR-3UTR CAA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 3 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGLITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
3UTR GCA 72 bp TTTTGTATCTGGAGACATAGGATGAACATTTTCATTTaGATCCTGTTGACCAAGTCCACCTTCATACTCTTT +
Preference number: 3 (lower is better)
Translates to: FCIWRHRMNIFI*ILLTKSTFILF
Trigger: AAAGAGTATGAAGGTGGACTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCAGTGGCCATCTCAATaGTCATACAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFQWPSQ*SYSPKP
Trigger: GGGCTTTGGGCTGTATGATCATTGAGATGGCCACTG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGATGAAATTGCTGGCTaGAACTCACATCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAADEIAG*NSHPGE
Trigger: CTCGCCTGGATGTGAGTTTCAGCCAGCAATTTCATC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGGCCATCTCCACCAGTaGTTCTGGGATTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFGHLHQ*FWDSLN
Trigger: ATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGAAGGAACCGGCCACTTaGCACCATGGAAACGCCGGC +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLKEPAT*HHGNAG
Trigger: GCCGGCGTTTCCATGGTGGCAAGTGGCCGGTTCCTT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGGCCACTTGCCACCATaGAAACGCCGGCGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVGHLPP*KRRRSC
Trigger: GCAACTCCGCCGGCGTTTCCATGGTGGCAAGTGGCC...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATGTGGTCCCGCTGGTCTaGCTCTGCGTAGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHVVPLV*LCVVPV
Trigger: CACTGGAACTACGCAGAGCCAGACCAGCGGGACCAC...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp GGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACACAGTGGCCATCTCAATaGTCATACAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GWHCHRTSAMWIFFQAITQWPSQ*SYSPKP
Trigger: GGGCTTTGGGCTGTATGATCATTGAGATGGCCACTG...TGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519312.5
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTTCTTCCCCTCGCAATaGCCATCTCCACCAGTGATT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFFFPSQ*PSPPVI
Trigger: AATCACTGGTGGAGATGGCCATTGCGAGGGGAAGAA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp ATGCCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MPHSTGTNSLYWSVFMPLGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...CAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTAACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAANLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp CTCATTTGCCATTTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCATCCACAGGTCTGGCTaGAACTCACATCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LICHLVTVTCSLIKYTLLIHRSG*NSHPGE
Trigger: CTCGCCTGGATGTGAGTTTCAGCCAGACCTGTGGAT...GAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAAATGGCAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGATTCTGGGATTCCCTaGATTTTCAGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAADSGIP*IFSCCI
Trigger: AATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATCCGCTGGTCTGGCTCTaGGTAGTTCCAGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDPLVWL*VVPVEP
Trigger: TGGCTCCACTGGAACTACGCAGAGCCAGACCAGCGG...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGGACCTGGATCCTCTTaGCTGCTATTAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFGPGSS*LLLGIT
Trigger: AGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATCCCACGTCCCGCTGTTaGCTTTATCCAAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDPTSRC*LYPNSR
Trigger: GCGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGG...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTATTCTGCAAGTGAGGTaGCAAATTGCCCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAILQVR*QIAHFQ
Trigger: TTGAAAGTGGGCAATTTGTCACCTCACTTGCAGAAT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTAAGATATTCTGCAAGTaGGGTGACAAATTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAKIFCK*GDKLPT
Trigger: AGTGGGCAATTTGTCACCTCACTTGCAGAATATCTT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp CCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: PHSTGTNSLYWSVFMPLINLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTT...TATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGCCATTTGGTCACTGTaGCCTGTTCGCTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFAIWSL*PVRSLN
Trigger: ATTTAATGAGCGAACAGGTCACAGTGACCAAATGGC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGTGAAGATAGTCAATTaGTCGAAGGATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAVKIVN*SKDLEE
Trigger: CTCTTCCAGATCCTTCGAGCAATTGACTATCTTCAC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCTCTATACCAGCGTGTaGCCACATAGTCCGTATAAA +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLYTSV*PHSPYK
Trigger: TTTATACGGACTATGTGGCCACACGCTGGTATAGAG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACCAGCTCACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: WVALSQNLRNVDFLSSHYQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTGAGCTG...GTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
3UTR CAA 72 bp AGCAATGCCCCACTCTACTGGTACCAATTCACTGTATaGGTCTGTCTTCATGCCGCTGATAAAGACGTACCT +
Preference number: 4 (lower is better)
Translates to: SNAPLYWYQFTV*VCLHAADKDVP
Trigger: AGGTACGTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATGGAGCCACCGAACACTaGTACTACTTTGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHGATEH*YYFVAQ
Trigger: CTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCC...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp ATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCAGTGGCCATCTCAATaGTCATACAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IVTEPPQCGFSFKPLQLVQWPSQ*SYSPKP
Trigger: GGGCTTTGGGCTGTATGATCATTGAGATGGCCACTG...CACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519312.5
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCAAAAGATCACTAGATaGTATCCTGTCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFQKITR*YPVSRI
Trigger: GATCCTGCTGACAGGATATCATCTAGTGATCTTTTG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: WVALSQNLRNVDFLSSHYSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...GTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp GGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACATCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GWHCHRTSAMWIFFQAITSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...TGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WVALSQNLRNVDFLSSHYGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...GTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp GATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTGCCATTTGGTCACTGTaGCCTGTTCGCTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: DGWHCHRTSAMWIFFQAIAIWSL*PVRSLN
Trigger: ATTTAATGAGCGAACAGGTCACAGTGACCAAATGGC...AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGAATCCACAGGTCTGGCTaGAACTCACATCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGIHRSG*NSHPGE
Trigger: CTCGCCTGGATGTGAGTTTCAGCCAGACCTGTGGAT...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp CTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTCACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: LLVRLMGGIVTEPPQCGFHLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTG...AAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
CDS-3UTR GCA 90 bp GCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACCTCCGGGACCTGGATCCTCTTaGCTGCTATTAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: AIKLLLVRLMGGIVTEPPGPGSS*LLLGIT
Trigger: AGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC...CGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCCTTTTGTTCTCATTTaGCATTTGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFPFVLI*HLVTVT
Trigger: GGTCACAGTGACCAAATGGCAAATGAGAACAAAAGG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACCAGCTCACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: QAITVSAGIDRVWWFNGYQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTGAGCTG...GTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATCAGTGGCCATCTCAATaGTCATACAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDQWPSQ*SYSPKP
Trigger: GGGCTTTGGGCTGTATGATCATTGAGATGGCCACTG...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp GAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTCAGTGGCCATCTCAATaGTCATACAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ELRFAAIKLLLVRLMGGIQWPSQ*SYSPKP
Trigger: GGGCTTTGGGCTGTATGATCATTGAGATGGCCACTG...AATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519312.5
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp GCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACCTCCGTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: AIKLLLVRLMGGIVTEPPSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...CGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTTCCTTTTGTATCTTTTaGCTGTATTGTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAASFCIF*LYCDRQ
Trigger: TTGCCTGTCACAATACAGTCAAAAGATACAAAAGGA...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTACTGATACTACTTTGTTaGTCAGCCCCGCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVLILLC*SAPQGT
Trigger: GGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAG...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp ATGCCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: MPHSTGTNSLYWSVFMPLMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...CAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp TTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCCATTTGGCTTTGGGACCTGGATCCTCTTaGCTGCTATTAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: LVTVTCSLIKYTLLHLALGPGSS*LLLGIT
Trigger: AGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC...CAAAGCCAAATGGAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp GGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACACCTTTTGTTCTCATTTaGCATTTGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: GWHCHRTSAMWIFFQAITPFVLI*HLVTVT
Trigger: GGTCACAGTGACCAAATGGCAAATGAGAACAAAAGG...TGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTTGTGACAGGCAATTCTaGAAAATGGAATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAACDRQF*KMEFFP
Trigger: AGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACA...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCCATTTGGCTTTGAGATATCCACAGGTCTaGCTGAAACTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: LVTVTCSLIKYTLLHLALRYPQV*LKLTSR
Trigger: CCTGGATGTGAGTTTCAGCCAGACCTGTGGATATCT...CAAAGCCAAATGGAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp GTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAAGATATCCACAGGTCTaGCTGAAACTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGLIGFGGSMVTSFVSGRYPQV*LKLTSR
Trigger: CCTGGATGTGAGTTTCAGCCAGACCTGTGGATATCT...TCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTAAACTTCAATCAGATTaGCCAGGTTTTCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFKLQSD*PGFRDE
Trigger: TTCATCACGAAAACCTGGTCAATCTGATTGAAGTTT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp CCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATCTTTTCAAGATATTCTGCAAGTaGGGTGACAAATTGCCCACT +
Preference number: 4 (lower is better)
Translates to: PLPVTQFQSCFHIFGYLFKIFCK*GDKLPT
Trigger: AGTGGGCAATTTGTCACCTCACTTGCAGAATATCTT...GAAAAGATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
CDS-3UTR TCA 90 bp TGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCTTCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: CHRTSAMWIFFQAITVSASFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...AGCACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTTGTCCAATAGATTGTaGAGAAGTGCGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLSNRL*RSASLF
Trigger: AAAAAGAGACGCACTTCTTCACAATCTATTGGACAA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCTTTTGACTGTATTGTaGCAGGCAATTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLLTVL*QAILEN
Trigger: ATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR TCA 90 bp CCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATATCCTTTTGTATCTTTTaGCTGTATTGTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: PHSTGTNSLYWSVFMPLISFCIF*LYCDRQ
Trigger: TTGCCTGTCACAATACAGTCAAAAGATACAAAAGGA...TATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp CTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCCACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: LRFAAIKLLLVRLMGGIVHLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTG...GACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
CDS-3UTR GCA 90 bp ATGCCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGAGTGAGGTGACAAATTaGCCACTTTCAAAACAATTT +
Preference number: 4 (lower is better)
Translates to: MPHSTGTNSLYWSVFMPLSEVTN*PLSKQF
Trigger: AAATTGTTTTGAAAGTGGGCAATTTGTCACCTCACT...CAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp CATTTGGCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGCCTTTTGTTCTCATTTaGCATTTGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: HLALNRTWILLPAIRHNLPFVLI*HLVTVT
Trigger: GGTCACAGTGACCAAATGGCAAATGAGAACAAAAGG...CAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCTTCCTTTCAGTTTGTaGATTTCCTGTATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLPFSL*ISCILL
Trigger: CAAGAGAATACAGGAAATGCACAAACTGAAAGGAAG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATTCTCCATTTTCAAGCTaGGCTTTTACTACGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHSPFSS*AFTTAS
Trigger: TGACGCCGTAGTAAAAGCCCAGCTTGAAAATGGAGA...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTATTGCTCGAAGGATCTaGAAGAGGTATTTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFIARRI*KRYFLS
Trigger: ACTTAGAAAATACCTCTTCCAGATCCTTCGAGCAAT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGCTCTATACCAGCGTGTaGCCACATAGTCCGTATAAA +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLLYTSV*PHSPYK
Trigger: TTTATACGGACTATGTGGCCACACGCTGGTATAGAG...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp CTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: LYWYQFTVLVCLHAADKDGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...GTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TATACCCTTCTCCATTTGGCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: YTLLHLALNRTWILLPAIGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAGGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: QAITVSAGIDRVWWFNGYGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...GTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp ATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCAAGTCCACCGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: IWRHRMNIFICILLTKSTALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...GGTGGACTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCTTTCCTGTCAGATCTaGAAAAATTCAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLSCQI*KNSASF
Trigger: AAAGGAAGCTGAATTTTTCCAGATCTGACAGGAAAG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTGGCAATTCTGGAAAATaGAATTCTTTCCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFGNSGK*NSFLSD
Trigger: ATCTGACAGGAAAGAATTCCATTTTCCAGAATTGCC...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CCA 90 bp TTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTACCAATTCACTGTATTaGTCTGTCTTCATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FQAITVSAGIDRVWWFNGTNSLY*SVFMPL
Trigger: CAGCGGCATGAAGACAGACCAATACAGTGAATTGGT...ACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCCATTTGGCTTTGACCAATTCACTGTATTaGTCTGTCTTCATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LVTVTCSLIKYTLLHLALTNSLY*SVFMPL
Trigger: CAGCGGCATGAAGACAGACCAATACAGTGAATTGGT...CAAAGCCAAATGGAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTTTCTACTCTACATCTaGCAAGTTCTTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFFLLYI*QVLLPF
Trigger: GAAAGGAAGAAGAACTTGCCAGATGTAGAGTAGAAA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523054.5
3UTR CAA 72 bp CTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATaGATGGGTGGCATTGTCACAGAACCTCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: LRFAAIKLLLVR*MGGIVTEPPQC
Trigger: ACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
3UTR CAA 72 bp CTTCTCCATTTGGCTTTGAATAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAACTTGTCCAATAGATTG +
Preference number: 4 (lower is better)
Translates to: LLHLALNRTWIL*PAIRHNLSNRL
Trigger: CAATCTATTGGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
3UTR CAA 72 bp ACTGTTCAAACCTCTGCCTGTTACCCAGTTCCAAAGTaGCTTCCACATTTTTGGGTATCTTTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: TVQTSACYPVPK*LPHFWVSFQQC
Trigger: GCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
CDS-3UTR TCA 90 bp CTCATTTGCCATTTGGTCACTGTGACCTGTTCGCTCATTAAATATACCCTTCTCATTCTGCAAGTGAGGTaGCAAATTGCCCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LICHLVTVTCSLIKYTLLILQVR*QIAHFQ
Trigger: TTGAAAGTGGGCAATTTGTCACCTCACTTGCAGAAT...GAGAAGGGTATATTTAATGAGCGAACAGGTCACAGTGACCAAATGGCAAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATAAGATATTCTGCAAGTaGGGTGACAAATTGCCCACT +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHKIFCK*GDKLPT
Trigger: AGTGGGCAATTTGTCACCTCACTTGCAGAATATCTT...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCAAAAGATCACTAGATaGTATCCTGTCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHQKITR*YPVSRI
Trigger: GATCCTGCTGACAGGATATCATCTAGTGATCTTTTG...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTATCATTTGCATCCTGTTaGCCAAGTCCACCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVSFASC*PSPPSY
Trigger: GTATGAAGGTGGACTTGGTCAACAGGATGCAAATGA...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGCCATTTGGTCACTGTaGCCTGTTCGCTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVAIWSL*PVRSLN
Trigger: ATTTAATGAGCGAACAGGTCACAGTGACCAAATGGC...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGGTGAAGATAGTCAATTaGTCGAAGGATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLVKIVN*SKDLEE
Trigger: CTCTTCCAGATCCTTCGAGCAATTGACTATCTTCAC...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTAGTGAGGTGACAAATTaGCCACTTTCAAAACAATTT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFSEVTN*PLSKQF
Trigger: AAATTGTTTTGAAAGTGGGCAATTTGTCACCTCACT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTAGCATGAACTATATCTaGCAACAATCCATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFSMNYI*QQSIKL
Trigger: AAGCTTAATGGATTGTTGGCAGATATAGTTCATGCT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR GCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATGGACCTGGATCCTCTTaGCTGCTATTAGGCATAACT +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDGPGSS*LLLGIT
Trigger: AGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCCTTTTGTTCTCATTTaGCATTTGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHPFVLI*HLVTVT
Trigger: GGTCACAGTGACCAAATGGCAAATGAGAACAAAAGG...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: WVALSQNLRNVDFLSSHYGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...GTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp CTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LYWYQFTVLVCLHAADKDRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...GTCTTTATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp ATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCAAGTCCACCAATGCCCCACTCTACTaGTACCAATTCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: IWRHRMNIFICILLTKSTNAPLY*YQFTVL
Trigger: CAATACAGTGAATTGGTACCAGTAGAGTGGGGCATT...GGTGGACTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp GGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACATTGCTTCCACATTTTTaGGTATCTTTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: GWHCHRTSAMWIFFQAITLLPHF*VSFQQC
Trigger: GCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAA...TGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTCATCGCAATTTTGTTaGCAGATTGTTCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLSSQFC*QIVLVS
Trigger: AGAGACCAGAACAATCTGTCAACAAAATTGCGATGA...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp GGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGTCCAATAGATTGTGAAGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: GPGSSCLLLGITCPIDCEERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...TTCACAATCTATTGGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGGGGGTGAAAGAGATTTaGACTGAGATTTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRGVKEI*TEICSH
Trigger: ATGGCTGCAAATCTCAGTTCAAATCTCTTTCACCCC...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATAACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDNLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTT...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGAACCTCACACTGGGGTaGAAGAGATTTGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRNLTLG*KRFELR
Trigger: TCTCAGTTCAAATCTCTTTCACCCCAGTGTGAGGTT...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp AGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGTTGTCCAATAGATTGTaGAGAAGTGCGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RLMGGIVTEPPQCGFSFKLSNRL*RSASLF
Trigger: AAAAAGAGACGCACTTCTTCACAATCTATTGGACAA...CTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp CATTTGGCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGTCCTTTTGTATCTTTTaGCTGTATTGTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: HLALNRTWILLPAIRHNLSFCIF*LYCDRQ
Trigger: TTGCCTGTCACAATACAGTCAAAAGATACAAAAGGA...CAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGCCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp CTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLVRLMGGIVTEPPQCGFMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...AAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR GCA 90 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QAITVSAGIDRVWWFNGYMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...GTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp AGATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: RLMGGIVTEPPQCGFSFKGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...CTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp ATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGGGGATTGATAGGGTTTaGTGGTTCAATGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: IVTEPPQCGFSFKPLQLVGIDRV*WFNGYK
Trigger: CTTGTAACCATTGAACCACCAAACCCTATCAATCCC...CACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp ACTGTATTGGTCTGTCTTCATGCCGCTGATAAAGACGTACCTCTTGTTTTTCTTCAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: TVLVCLHAADKDVPLVFLQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...AAGAAAAACAAGAGGTACGTCTTTATCAGCGGCATGAAGACAGACCAATACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519312.5
CDS-3UTR CCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp GAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGCTTTGAATAGGACCTaGATCCTCTTGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: ELRFAAIKLLLVRLMGGIALNRT*ILLPAI
Trigger: AATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC...AATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp ATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACTTTCCTGTCAGATCTaGAAAAATTCAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: MGGIVTEPPQCGFSFKPLLSCQI*KNSASF
Trigger: AAAGGAAGCTGAATTTTTCCAGATCTGACAGGAAAG...TAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TCAAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATCCTTTCCTGTCAGATCTaGAAAAATTCAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SNLCLLPSSKVASTFLGILSCQI*KNSASF
Trigger: AAAGGAAGCTGAATTTTTCCAGATCTGACAGGAAAG...GATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520693.5
CDS-3UTR TCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGAAACTTCAATCAGATTaGCCAGGTTTTCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLKLQSD*PGFRDE
Trigger: TTCATCACGAAAACCTGGTCAATCTGATTGAAGTTT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATATTCTGCAAGTGAGGTaGCAAATTGCCCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDILQVR*QIAHFQ
Trigger: TTGAAAGTGGGCAATTTGTCACCTCACTTGCAGAAT...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATTCTGCAAGTGAGGTaGCAAATTGCCCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRILQVR*QIAHFQ
Trigger: TTGAAAGTGGGCAATTTGTCACCTCACTTGCAGAAT...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACAAAAGATCACTAGATaGTATCCTGTCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: FAAIKLLLVRLMGGIVTEQKITR*YPVSRI
Trigger: GATCCTGCTGACAGGATATCATCTAGTGATCTTTTG...TTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519312.5
CDS-3UTR TCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp TTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: FQAITVSAGIDRVWWFNGERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...ACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTTGTCCAATAGATTGTaGAGAAGTGCGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLLSNRL*RSASLF
Trigger: AAAAAGAGACGCACTTCTTCACAATCTATTGGACAA...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp TTTTGTATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCAAGGCCATTTGGTCACTGTaGCCTGTTCGCTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: FCIWRHRMNIFICILLTKAIWSL*PVRSLN
Trigger: ATTTAATGAGCGAACAGGTCACAGTGACCAAATGGC...CTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp CTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACCTTTTGACTGTATTGTaGCAGGCAATTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LGLIGFGGSMVTSFVSGDLLTVL*QAILEN
Trigger: ATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAG...GTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp AACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATCTTTGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: NLCLLPSSKVASTFLGIFGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...AAAGATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520693.5
CDS-3UTR CCA 90 bp CAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: QAITVSAGIDRVWWFNGYIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...GTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp ATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTAATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: MGGIVTEPPQCGFSFKPLIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...TAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp GATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATGAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: DRVWWFNGYKFCIWRHRMRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...CATCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp TTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTCAGTTAACCTCACACTaGGGTGAAAGAGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: LQLVLGLIGFGGSMVTSFQLTSH*GERDLN
Trigger: GTTCAAATCTCTTTCACCCCAGTGTGAGGTTAACTG...AAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGCTTTCCTGTCAGATCTaGAAAAATTCAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLLSCQI*KNSASF
Trigger: AAAGGAAGCTGAATTTTTCCAGATCTGACAGGAAAG...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATGGCAATTCTGGAAAATaGAATTCTTTCCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHGNSGK*NSFLSD
Trigger: ATCTGACAGGAAAGAATTCCATTTTCCAGAATTGCC...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TCTTGCCTGCTATTAGGCATAACTTGTCCAATAGATTGTGAAGAAGTGCGTCTCTGTGACAGGCAATTCTaGAAAATGGAATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCLLLGITCPIDCEEVRLCDRQF*KMEFFP
Trigger: AGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACA...GAGACGCACTTCTTCACAATCTATTGGACAAGTTATGCCTAATAGCAGGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATAGTGAGGTGACAAATTaGCCACTTTCAAAACAATTT +
Preference number: 4 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHSEVTN*PLSKQF
Trigger: AAATTGTTTTGAAAGTGGGCAATTTGTCACCTCACT...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAATGAACATTTTCATTTaGATCCTGTTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVMNIFI*ILLTKS
Trigger: GGACTTGGTCAACAGGATGCAAATGAAAATGTTCAT...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAATTGCTCGAAGGATCTaGAAGAGGTATTTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVIARRI*KRYFLS
Trigger: ACTTAGAAAATACCTCTTCCAGATCCTTCGAGCAAT...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp GTATTATTTAGGTTTCTTCTCTGTTACAGCTCACCTCACACTGGGGTGAAAGAGATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: VLFRFLLCYSSPHTGVKEIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...CTCTTTCACCCCAGTGTGAGGTGAGCTGTAACAGAGAAGAAACCTAAATAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520592.1
ENST00000521755.1
CDS-3UTR CCA 90 bp GATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGATGTGTGACAGGCAATTCTaGAAAATGGAATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: DRVWWFNGYKFCIWRHRMCDRQF*KMEFFP
Trigger: AGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACA...CATCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp ACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTTTGCTTCCACATTTTTaGGTATCTTTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: TVSAGIDRVWWFNGYKFCLLPHF*VSFQQC
Trigger: GCATTGCTGAAAAGATACCCAAAAATGTGGAAGCAA...ACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp AGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTAAGATATTCTGCAAGTaGGGTGACAAATTGCCCACT +
Preference number: 4 (lower is better)
Translates to: RFELRFAAIKLLLVRLMGKIFCK*GDKLPT
Trigger: AGTGGGCAATTTGTCACCTCACTTGCAGAATATCTT...ACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LQLVLGLIGFGGSMVTSFERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...AAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGTTGTCCAATAGATTGTaGAGAAGTGCGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRLSNRL*RSASLF
Trigger: AAAAAGAGACGCACTTCTTCACAATCTATTGGACAA...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATCTTTTGACTGTATTGTaGCAGGCAATTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDLLTVL*QAILEN
Trigger: ATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAG...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR TCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATTCCTTTTGTATCTTTTaGCTGTATTGTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDSFCIF*LYCDRQ
Trigger: TTGCCTGTCACAATACAGTCAAAAGATACAAAAGGA...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR GCA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAAGCATGAACTATATCTaGCAACAATCCATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVSMNYI*QQSIKL
Trigger: AAGCTTAATGGATTGTTGGCAGATATAGTTCATGCT...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp TTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGCAATTCTGGAAAATaGAATTCTTTCCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVLGLIGFGGSMVTSFVSGNSGK*NSFLSD
Trigger: ATCTGACAGGAAAGAATTCCATTTTCCAGAATTGCC...AGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGGGCAATTCTGGAAAATaGAATTCTTTCCTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRGNSGK*NSFLSD
Trigger: ATCTGACAGGAAAGAATTCCATTTTCCAGAATTGCC...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CCA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATTGTGACAGGCAATTCTaGAAAATGGAATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDCDRQF*KMEFFP
Trigger: AGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACA...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CCA 90 bp AGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTAATGCCCCACTCTACTaGTACCAATTCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: RFELRFAAIKLLLVRLMGNAPLY*YQFTVL
Trigger: CAATACAGTGAATTGGTACCAGTAGAGTGGGGCATT...ACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR TCA 90 bp TTTTGTATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCAAGGAAAGAGATTTGAACTaGGATTTGCAGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: FCIWRHRMNIFICILLTKERDLN*DLQPSN
Trigger: ATTTGATGGCTGCAAATCTCAGTTCAAATCTCTTTC...CTTGGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR GCA 90 bp TTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTAGTGAGGTGACAAATTaGCCACTTTCAAAACAATTT +
Preference number: 4 (lower is better)
Translates to: LVLGLIGFGGSMVTSFVSSEVTN*PLSKQF
Trigger: AAATTGTTTTGAAAGTGGGCAATTTGTCACCTCACT...AGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR GCA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGAAGCATGAACTATATCTaGCAACAATCCATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGSMNYI*QQSIKL
Trigger: AAGCTTAATGGATTGTTGGCAGATATAGTTCATGCT...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519312.5
CDS-3UTR CCA 90 bp AAGTTTTGTATCTGGAGACATAGGATGAACATTTTCATTTGCATCCTGTTGACCGGTTTGGTGGTTCAATaGTTACAAGTTTTGTATCTG +
Preference number: 4 (lower is better)
Translates to: KFCIWRHRMNIFICILLTGLVVQ*LQVLYL
Trigger: CAGATACAAAACTTGTAACCATTGAACCACCAAACC...GGTCAACAGGATGCAAATGAAAATGTTCATCCTATGTCTCCAGATACAAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp GAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTATTGATAGGGTTTGGTaGTTCAATGGTTACAAGTTT +
Preference number: 4 (lower is better)
Translates to: ELRFAAIKLLLVRLMGGIIDRVW*FNGYKF
Trigger: AAACTTGTAACCATTGAACCACCAAACCCTATCAAT...AATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CCA 90 bp AGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTAGAACCTCCGCAATGTaGATTTTCTTTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: RFELRFAAIKLLLVRLMGRTSAM*IFFQAI
Trigger: AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCT...ACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR TCA 90 bp AGATTTGAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTCTTTTGACTGTATTGTaGCAGGCAATTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RFELRFAAIKLLLVRLMGLLTVL*QAILEN
Trigger: ATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAG...ACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTCAAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS GCA 90 bp GCCGCCGCCGCCTCAGCCCATTCTGTGGTCCCGCTGGTCTGGCTCTaGGTAGTTCCAGTGGAGCCACCGAACACTGATACTACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: AAAASAHSVVPLVWL*VVPVEPPNTDTTLL
Trigger: CAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCAGACCAGCGGGACCACAGAATGGGCTGAGGCGGCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS TCA 90 bp CCCGCTGGTCTGGCTCTGCGTAGTTCCAGTGGAGCCACCGAACACTaGTACTACTTTGTTGCTCAGCCCCGCAAGGAACCGGCCACTTGC +
Preference number: 5 (lower is better)
Translates to: PAGLALRSSSGATEH*YYFVAQPRKEPATC
Trigger: GCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCAGACCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS TCA 90 bp TCAAGCTGGGCTTTTACTACGGCGTCACGCCCCACGTCCCGCTGTTaGCTTTATCCAAACAGCCGCCGCCGCCTCAGCCCATTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SSWAFTTASRPTSRC*LYPNSRRRLSPFCG
Trigger: ACCACAGAATGGGCTGAGGCGGCGGCGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGGGCGTGACGCCGTAGTAAAAGCCCAGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000521118.5
CDS-3UTR CAA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTTTTGGGGTGTTGAACTaGAGGAAGAACTACCCCAGC +
Preference number: 5 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAFGVLN*RKNYPS
Trigger: GCTGGGGTAGTTCTTCCTCAAGTTCAACACCCCAAA...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATCAAGGAACCGGCCACTaGCCACCATGGAAACGCCGG +
Preference number: 5 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDQGTGH*PPWKRR
Trigger: CCGGCGTTTCCATGGTGGCAAGTGGCCGGTTCCTTG...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGCCCCACGTCCCGCTGTaGACTTTATCCAAACAGCCG +
Preference number: 5 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLPHVPL*TLSKQP
Trigger: CGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGGG...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp CCCCACTCTACTGGTACCAATTCACTGTATTGGTCTGTCTTCATGCCGCTGATATTTGGGGTGTTGAACTaGAGGAAGAACTACCCCAGC +
Preference number: 5 (lower is better)
Translates to: PHSTGTNSLYWSVFMPLIFGVLN*RKNYPS
Trigger: GCTGGGGTAGTTCTTCCTCAAGTTCAACACCCCAAA...TATCAGCGGCATGAAGACAGACCAATACAGTGAATTGGTACCAGTAGAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAAC +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFRTWIL*PAIRHN
Trigger: GTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCT...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp GATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTTTTGGGGTGTTGAACTaGAGGAAGAACTACCCCAGC +
Preference number: 5 (lower is better)
Translates to: DGWHCHRTSAMWIFFQAIFGVLN*RKNYPS
Trigger: GCTGGGGTAGTTCTTCCTCAAGTTCAACACCCCAAA...AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTCTTCTCCATTTGGCTTaGAATAGGACCTGGATCCTC +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLLHLA*NRTWIL
Trigger: GAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAG...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTTGTGAAGATAGTCAATaGCTCGAAGGATCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SQWPSPPVILGFPEFSAACEDSQ*LEGSGR
Trigger: TCTTCCAGATCCTTCGAGCAATTGACTATCTTCACA...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp TTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCACAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LMGGIVTEPPQCGFSFKPQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...TGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp GGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACACTTCTCCATTTGGCTTaGAATAGGACCTGGATCCTC +
Preference number: 5 (lower is better)
Translates to: GWHCHRTSAMWIFFQAITLLHLA*NRTWIL
Trigger: GAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAG...TGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGACTGATACTACTTTGTaGCTCAGCCCCGCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLTDTTL*LSPARN
Trigger: GTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAAC +
Preference number: 5 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHRTWIL*PAIRHN
Trigger: GTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCT...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp GCTTTGAATAGGACCTGGATCCTCTTGCCTGCTATTAGGCATAACTTGTCCAATCTTCTCCATTTGGCTTaGAATAGGACCTGGATCCTC +
Preference number: 5 (lower is better)
Translates to: ALNRTWILLPAIRHNLSNLLHLA*NRTWIL
Trigger: GAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAG...ATTGGACAAGTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCTATTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTCCTTTTGTTCTCATTaGCCATTTGGTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFSFCSH*PFGHCD
Trigger: GTCACAGTGACCAAATGGCAAATGAGAACAAAAGGA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp TCGCAATGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTATGACTCTGTTTTCTTaGACTCCCTCTTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: SQWPSPPVILGFPEFSAAMTLFS*TPSSAF
Trigger: AAATGCTGAAGAGGGAGTCAAAGAAAACAGAGTCAT...AGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCATTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTATTTGGGGTGTTGAACTaGAGGAAGAACTACCCCAGC +
Preference number: 5 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVFGVLN*RKNYPS
Trigger: GCTGGGGTAGTTCTTCCTCAAGTTCAACACCCCAAA...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCTTCTCCATTTGGCTTaGAATAGGACCTGGATCCTC +
Preference number: 5 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHLLHLA*NRTWIL
Trigger: GAGGATCCAGGTCCTATTCAAAGCCAAATGGAGAAG...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp GATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTTCCTTTTGTTCTCATTaGCCATTTGGTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: DGWHCHRTSAMWIFFQAISFCSH*PFGHCD
Trigger: GTCACAGTGACCAAATGGCAAATGAGAACAAAAGGA...AATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGGCCATCTCCACCAGTGATTCTGGGATTCCCTGAATTTTCAGCTGCTGCATTTTTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: WPSPPVILGFPEFSAAAFLITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...AAATGCAGCAGCTGAAAATTCAGGGAATCCCAGAATCACTGGTGGAGATGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523054.5
CDS-3UTR CAA 90 bp CAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTACAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: QLVLGLIGFGGSMVTSFVQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...TACAAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp ATTGATGGGTGGCATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: IDGWHCHRTSAMWIFFQALLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...GGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp TTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAAC +
Preference number: 5 (lower is better)
Translates to: LQLVLGLIGFGGSMVTSFRTWIL*PAIRHN
Trigger: GTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCT...AAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGAGGACCTGGATCCTCTaGCCTGCTATTAGGCATAAC +
Preference number: 5 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRRTWIL*PAIRHN
Trigger: GTTATGCCTAATAGCAGGCAAGAGGATCCAGGTCCT...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGCTCATCGCAATTTTGTaGACAGATTGTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLLIAIL*TDCSGL
Trigger: GAGACCAGAACAATCTGTCAACAAAATTGCGATGAG...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp TTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGACAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LIGFGGSMVTSFVSGDIGQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...TCCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp TTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTCAGTTAGTGCTGGGATaGATAGGGTTTGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LQLVLGLIGFGGSMVTSFQLVLG*IGFGGS
Trigger: TGAACCACCAAACCCTATCAATCCCAGCACTAACTG...AAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp AAAAGCTGGATGATGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATTCCTTTTGTTCTCATTaGCCATTTGGTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: KSWMMLMHMDGCLNNNSHSFCSH*PFGHCD
Trigger: GTCACAGTGACCAAATGGCAAATGAGAACAAAAGGA...ATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCATCATCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTATGTGAAGATAGTCAATaGCTCGAAGGATCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVCEDSQ*LEGSGR
Trigger: TCTTCCAGATCCTTCGAGCAATTGACTATCTTCACA...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp GCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAACCTTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: AAIKLLLVRLMGGIVTEPLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...AGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp TTTCAAGCCATTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTATGACTCTGTTTTCTTaGACTCCCTCTTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: FQAITVSAGIDRVWWFNGMTLFS*TPSSAF
Trigger: AAATGCTGAAGAGGGAGTCAAAGAAAACAGAGTCAT...ACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAATGGCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp TGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTGCTATGACTCTGTTTTCTTaGACTCCCTCTTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: CHRTSAMWIFFQAITVSAMTLFS*TPSSAF
Trigger: AAATGCTGAAGAGGGAGTCAAAGAAAACAGAGTCAT...AGCACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTATCTCTCATCGCAATTTaGTTGACAGATTGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVSLIAI*LTDCSG
Trigger: ACCAGAACAATCTGTCAACAAAATTGCGATGAGAGA...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp CTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: LRFAAIKLLLVRLMGGIVLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...GACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAATGACTCTGTTTTCTTaGACTCCCTCTTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVMTLFS*TPSSAF
Trigger: AAATGCTGAAGAGGGAGTCAAAGAAAACAGAGTCAT...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000518990.5
CDS-3UTR CAA 90 bp TGCTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGACCCTCTTGTTTTTCTaGATTTTGATCCACGTTAAG +
Preference number: 5 (lower is better)
Translates to: CSCTWMAVLTTTHITLLLTLLFF*ILIHVK
Trigger: CTTAACGTGGATCAAAATCAAGAAAAACAAGAGGGT...CAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATGCCATCTCCACCCTCTaGTTTTTCTTGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDAISTL*FFLILI
Trigger: GATCAAAATCAAGAAAAACAAGAGGGTGGAGATGGC...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp CTCATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTATTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LMHMDGCLNNNSHHTSIVLITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...TACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp CATTGTCACAGAACCTCCGCAATGTGGATTTTCTTTCAAGCCATTACAGTTAGTTTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: HCHRTSAMWIFFQAITVSLITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...ACTAACTGTAATGGCTTGAAAGAAAATCCACATTGCGGAGGTTCTGTGACAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATTTACTGTTAGTTAGATaGATGGGTGGCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDLLLVR*MGGIVT
Trigger: TGTGACAATGCCACCCATCAATCTAACTAACAGTAA...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS-3UTR CAA 90 bp TCTTTTGACTGTATTGTGACAGGCAATTCTGGAAAATGGAATTCTTTCCTGTCATCCTTTTGTTCTCATTaGCCATTTGGTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: SFDCIVTGNSGKWNSFLSSFCSH*PFGHCD
Trigger: GTCACAGTGACCAAATGGCAAATGAGAACAAAAGGA...TGACAGGAAAGAATTCCATTTTCCAGAATTGCCTGTCACAATACAGTCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp ATGCACATGGATGGCTGTCTTAACAACAACTCACATCACACTTCTATTGTAGATATGACTCTGTTTTCTTaGACTCCCTCTTCAGCATTT +
Preference number: 5 (lower is better)
Translates to: MHMDGCLNNNSHHTSIVDMTLFS*TPSSAF
Trigger: AAATGCTGAAGAGGGAGTCAAAGAAAACAGAGTCAT...ATCTACAATAGAAGTGTGATGTGAGTTGTTGTTAAGACAGCCATCCATGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000518990.5
CDS-3UTR CAA 90 bp TTACAGTTAGTGCTGGGATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTTGCTTCCACATTTTaGGGTATCTTTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: LQLVLGLIGFGGSMVTSFVASTF*GIFSAM
Trigger: CATTGCTGAAAAGATACCCAAAAATGTGGAAGCAAC...AAAACTTGTAACCATTGAACCACCAAACCCTATCAATCCCAGCACTAACTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519312.5
ENST00000520693.5
CDS-3UTR CAA 90 bp GAACTGAGATTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTTTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ELRFAAIKLLLVRLMGGILITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...AATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAATCTCAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp ATTGATAGGGTTTGGTGGTTCAATGGTTACAAGTTTTGTATCTGGAGACATAGGTTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IDRVWWFNGYKFCIWRHRLITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...CCTATGTCTCCAGATACAAAACTTGTAACCATTGAACCACCAAACCCTATCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS-3UTR CAA 90 bp TTTGCAGCCATCAAATTACTGTTAGTTAGATTGATGGGTGGCATTGTCACAGAATTAATAACTCTGACTTaGATCTCCTTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: FAAIKLLLVRLMGGIVTELITLT*ISLGFF
Trigger: GAAAAAGCCCAAGGAGATCAAAGTCAGAGTTATTAA...TTCTGTGACAATGCCACCCATCAATCTAACTAACAGTAATTTGATGGCTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519312.5
ENST00000520592.1
ENST00000520693.5
ENST00000521755.1
CDS CCA 72 bp GCCGCCGCCTCAGCCCATTCTGTGGTCCCGCTGGTCTaGCTCTGCGTAGTTCCAGTGGAGCCACCGAACACT +
Preference number: 6 (lower is better)
Translates to: AAASAHSVVPLV*LCVVPVEPPNT
Trigger: AGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCAGACCAGCGGGACCACAGAATGGGCTGAGGCGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 72 bp GGCTTTTACTACGGCGTCACGCCCCACGTCCCGCTGTaGACTTTATCCAAACAGCCGCCGCCGCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: GFYYGVTPHVPL*TLSKQPPPPQP
Trigger: GGGCTGAGGCGGCGGCGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGGGCGTGACGCCGTAGTAAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000521118.5
CDS TCA 72 bp GCTTTTACTACGGCGTCACGCCCCACGTCCCGCTGTTaGCTTTATCCAAACAGCCGCCGCCGCCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: AFTTASRPTSRC*LYPNSRRRLSP
Trigger: TGGGCTGAGGCGGCGGCGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGGGCGTGACGCCGTAGTAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000521118.5
CDS GCA 72 bp TACTTTGTTGCTCAGCCCCGCAAGGAACCGGCCACTTaGCACCATGGAAACGCCGGCGGAGTTGCTGCGTTC +
Preference number: 6 (lower is better)
Translates to: YFVAQPRKEPAT*HHGNAGGVAAF
Trigger: GAACGCAGCAACTCCGCCGGCGTTTCCATGGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 72 bp CTACTTTGTTGCTCAGCCCCGCAAGGAACCGGCCACTaGCCACCATGGAAACGCCGGCGGAGTTGCTGCGTT +
Preference number: 6 (lower is better)
Translates to: LLCCSAPQGTGH*PPWKRRRSCCV
Trigger: AACGCAGCAACTCCGCCGGCGTTTCCATGGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 90 bp TTCAAGCTGGGCTTTTACTACGGCGTCACGCCCCACGTCCCGCTGTaGACTTTATCCAAACAGCCGCCGCCGCCTCAGCCCATTCTGTGG +
Preference number: 6 (lower is better)
Translates to: FKLGFYYGVTPHVPL*TLSKQPPPPQPILW
Trigger: CCACAGAATGGGCTGAGGCGGCGGCGGCTGTTTGGATAAAGTCAACAGCGGGACGTGGGGCGTGACGCCGTAGTAAAAGCCCAGCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265334.9
ENST00000521118.5
CDS GCA 72 bp GCCTCAGCCCATTCTGTGGTCCCGCTGGTCTGGCTCTaGGTAGTTCCAGTGGAGCCACCGAACACTGATACT +
Preference number: 6 (lower is better)
Translates to: ASAHSVVPLVWL*VVPVEPPNTDT
Trigger: AGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCAGACCAGCGGGACCACAGAATGGGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 72 bp GTTCCAGTGGAGCCACCGAACACTGATACTACTTTGTaGCTCAGCCCCGCAAGGAACCGGCCACTTGCCACC +
Preference number: 6 (lower is better)
Translates to: VPVEPPNTDTTL*LSPARNRPLAT
Trigger: GGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 90 bp CTCTGCGTAGTTCCAGTGGAGCCACCGAACACTGATACTACTTTGTaGCTCAGCCCCGCAAGGAACCGGCCACTTGCCACCATGGAAACG +
Preference number: 6 (lower is better)
Translates to: LCVVPVEPPNTDTTL*LSPARNRPLATMET
Trigger: CGTTTCCATGGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS CAA 90 bp TGGCTCTGCGTAGTTCCAGTGGAGCCACCGAACACTGATACTACTTaGTTGCTCAGCCCCGCAAGGAACCGGCCACTTGCCACCATGGAA +
Preference number: 6 (lower is better)
Translates to: WLCVVPVEPPNTDTT*LLSPARNRPLATME
Trigger: TTCCATGGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS TCA 72 bp CTGGCTCTGCGTAGTTCCAGTGGAGCCACCGAACACTaGTACTACTTTGTTGCTCAGCCCCGCAAGGAACCG +
Preference number: 6 (lower is better)
Translates to: LALRSSSGATEH*YYFVAQPRKEP
Trigger: CGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAACTACGCAGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS GCA 72 bp TTCCAGTGGAGCCACCGAACACTGATACTACTTTGTTaGTCAGCCCCGCAAGGAACCGGCCACTTGCCACCA +
Preference number: 6 (lower is better)
Translates to: FQWSHRTLILLC*SAPQGTGHLPP
Trigger: TGGTGGCAAGTGGCCGGTTCCTTGCGGGGCTGAGCAACAAAGTAGTATCAGTGTTCGGTGGCTCCACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265334.9
CDS TCA 72 bp GTTCAAGAGCAGCCTGGCCAACCACAGCCAACACGGTaGAACCCCGTCTATGAACTATATCTGCCAACAATC +
Preference number: 6 (lower is better)
Translates to: VQEQPGQPQPTR*NPVYELYLPTI
Trigger: GATTGTTGGCAGATATAGTTCATAGACGGGGTTTCACCGTGTTGGCTGTGGTTGGCCAGGCTGCTCTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522501.1
CDS TCA 72 bp TGGCCAACCACAGCCAACACGGTGAAACCCCGTCTATaGACTATATCTGCCAACAATCCATTAAGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: WPTTANTVKPRL*TISANNPLSFG
Trigger: TCCAAAGCTTAATGGATTGTTGGCAGATATAGTTCATAGACGGGGTTTCACCGTGTTGGCTGTGGTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522501.1