RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDKAL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145996

Ensembl transcript IDs: ENST00000274695.8, ENST00000378610.1, ENST00000476517.1, ENST00000613575.4

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGGGGAGCCTCATTAAGAAGAGTGGCTGAGAAGGAGGCAGCATaGCCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTT +
Preference number: 1 (lower is better)
Translates to: TGGASLRRVAEKEAA*PVQIIALGEWRCRF
Trigger: AAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTAATGAGGCTCCCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CCA 90 bp TTTCCAGTTTCATATTTCACAGAATGTTGCCAGGAGTCCTTTAGCTaGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: FPVSYFTECCQESFS*QTLPVHSKSIQVPR
Trigger: TCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR GCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGTGACCTGAGATCGTaGCACTGCACCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQSDLRS*HCTTPA
Trigger: GGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGATTGCCCTTGGAGAATaGAGATGTCGCTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQIALGE*RCRFPV
Trigger: AACAGGAAAGCGACATCTCCATTCTCCAAGGGCAAT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCACATGAGGAAAAGATaGCCAGAGCCACTGTACAAT +
Preference number: 2 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQHMRKR*PEPLYN
Trigger: ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAAAAGCAGTTTAATTTaGAGGATGTGCTATGGTAGC +
Preference number: 2 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQKSSLI*RMCYGS
Trigger: GCTACCATAGCACATCCTTCAAATTAAACTGCTTTT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAGTGACCTGAGATCGTaGCACTGCACCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKSDLRS*HCTTPA
Trigger: GGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACCAGGAGGCAGAGGTTaGAGTGACCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKPGGRG*SDLRSC
Trigger: GCACGATCTCAGGTCACTGCAACCTCTGCCTCCTGG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAAAAGCAGTTTAATTTaGAGGATGTGCTATGGTAGC +
Preference number: 2 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEKSSLI*RMCYGS
Trigger: GCTACCATAGCACATCCTTCAAATTAAACTGCTTTT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR TCA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCCGAACAACACATCCTTaGCCTTGTCACCACTGCCAA +
Preference number: 2 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLRTTHP*PCHHCQ
Trigger: TTGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCG...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
3UTR-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAATTGCCCTTGGAGAATaGAGATGTCGCTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKIALGE*RCRFPV
Trigger: AACAGGAAAGCGACATCTCCATTCTCCAAGGGCAAT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACACATGAGGAAAAGATaGCCAGAGCCACTGTACAAT +
Preference number: 2 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKHMRKR*PEPLYN
Trigger: ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTACAAATTATTGCCCTaGGAGAATGGAGATGTCGCT +
Preference number: 3 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQYKLLP*ENGDVA
Trigger: AGCGACATCTCCATTCTCCAAGGGCAATAATTTGTA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGACCAGTACAAATTATaGCCCTTGGAGAATGGAGAT +
Preference number: 3 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQDQYKL*PLENGD
Trigger: ATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CCA 72 bp TCATATTTCACAGAATGTTGCCAGGAGTCCTTTAGCTaGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAG +
Preference number: 3 (lower is better)
Translates to: SYFTECCQESFS*QTLPVHSKSIQ
Trigger: CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CAA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCTCGAACAACACATCCTaGACCTTGTCACCACTGCCA +
Preference number: 3 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLSNNTS*TLSPLP
Trigger: TGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCGA...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
3UTR-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGACCAGTACAAATTATaGCCCTTGGAGAATGGAGAT +
Preference number: 3 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKDQYKL*PLENGD
Trigger: ATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR-3UTR CAA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAAACACATCCTTGACCTaGTCACCACTGCCAATCTAT +
Preference number: 3 (lower is better)
Translates to: FRIHNSERGFSLIPLEGENTSLT*SPLPIY
Trigger: ATAGATTGGCAGTGGTGACAAGGTCAAGGATGTGTT...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATGGCGAGGCTGGGCTTaGGGAACGCATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEWRGWA*GTHPAS
Trigger: ACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCTCAGCGCACAGTCTTaGTGTAGCCTTGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLSAQS*CSLGMG
Trigger: GCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGGGCCCAACTCAATGTaGGACAGGGGGAGCCTCATT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQGPNSM*DRGSLI
Trigger: AATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGAGGTGTGGGATCCTaGACTCAGCTGGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQRGVGS*TQLVPK
Trigger: CTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACTCGCTGAGTCACACTaGGATGCAGCAGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPELAESH*DAAEVW
Trigger: CCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGGTAGGAGGACTGCTTaGGTCCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEGRRTA*VQEVKA
Trigger: AGCCTTGACCTCCTGGACTCAAGCAGTCCTCCTACC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGATGCAGCAGAGGTGTaGGATCCTGAACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQDAAEV*DPELSW
Trigger: CCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCAACCATCTTCCCCATaGACGCAGGGTTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQQPSSP*TQGSLA
Trigger: TGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTTGCTAGCGGTTTGCTaGTGGAGGGCGTGTACACTT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLLAVC*WRACTL
Trigger: AAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAGAGGTGTGGGATCCTaGACTCAGCTGGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPERGVGS*TQLVPK
Trigger: CTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGGGCGTGTACACTTTaGCATCAGATACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQRACTL*HQILAA
Trigger: GGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGATGGAGAGCGCCATaGCACATACGTCCCGCCACG +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFRWRAP*HIRPAT
Trigger: CGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCTCTTTTCATTTCCATaGGTACGCTGTCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLFSFP*VRCRRQ
Trigger: CTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTCCCAAGCCCATTTCTaGAGTCCTTTGTCAAACCCG +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQSQAHF*SPLSNP
Trigger: CGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTGGTGCCAATATCTCTaGCATAAGCCCCCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQWCQYL*HKPPCL
Trigger: AAGACACGGGGGCTTATGGCAGAGATATTGGCACCA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGGCAGACTCTCCCCGTaGATTCCAAAAGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEGRLSP*IPKAFR
Trigger: CCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGGAGGCAGACTGGACTaGTATGTGCAGAAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQGGRLD*YVQKSV
Trigger: TACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGATGTAGCCTTGGCATaGGCAGCACCATTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEDVALA*AAPFWN
Trigger: GTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGTCCTCTTGAAAGATaGGTCCAGAAGTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQSPLER*VQKSGS
Trigger: ACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATCCCAAGCCCATTTCTaGAGTCCTTTGTCAAACCCG +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPESQAHF*SPLSNP
Trigger: CGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCTCGCTGAGTCACACTaGGATGCAGCAGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLAESH*DAAEVW
Trigger: CCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGGGCCCAACTCAATGTaGGACAGGGGGAGCCTCATT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFGPNSM*DRGSLI
Trigger: AATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGGTAGGAGGACTGCTTaGGTCCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFGRRTA*VQEVKA
Trigger: AGCCTTGACCTCCTGGACTCAAGCAGTCCTCCTACC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACCACTCTCCGGAAGCTaGACAGACTTTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEPLSGS*TDFRWR
Trigger: TCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS-3UTR GCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATGGTGCCAATATCTCTaGCATAAGCCCCCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEWCQYL*HKPPCL
Trigger: AAGACACGGGGGCTTATGGCAGAGATATTGGCACCA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTGTGGGGAGATTGGTaGCAATATCTCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQVWGDW*QYLCHK
Trigger: CTTATGGCAGAGATATTGGCACCAATCTCCCCACAC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGTGACCTGAGATCGTaGCACTGCACCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFSDLRS*HCTTPA
Trigger: GGCTGGAGTGGTGCAGTGGCACGATCTCAGGTCACT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCCAGGAGGCAGAGGTTaGAGTGACCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFPGGRG*SDLRSC
Trigger: GCACGATCTCAGGTCACTGCAACCTCTGCCTCCTGG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGGAGTGTGGGGAGATTaGTGCCAATATCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEGVWGD*CQYLCH
Trigger: ATGGCAGAGATATTGGCACCAATCTCCCCACACTCC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGGAGGCAGACTGGACTaGTATGTGCAGAAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEGGRLD*YVQKSV
Trigger: TACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAAAACCAGTCCAAAGTaGGAAAATCAACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQKTSPK*ENQPAT
Trigger: AGTGGCGGGTTGATTTTCTCACTTTGGACTGGTTTT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACCCCCGTGTCTTCACTaGTCAACCATATCTCACAAA +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEPPCLH*STISHK
Trigger: TTTGTGAGATATGGTTGACCAGTGAAGACACGGGGG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTGCAGCAGGAGTTCCTaGTCTTGGGTAAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQCSRSS*SWVKLV
Trigger: AACCAATTTTACCCAAGACCAGGAACTCCTGCTGCA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCAGGAGTCCTTTAGCTaGCAGACTCTCCCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFQESFS*QTLPVH
Trigger: ATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATGGCGAGGCTGGGCTTaGGGAACGCATCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKWRGWA*GTHPAS
Trigger: ACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCAACCATCTTCCCCATaGACGCAGGGTTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFQPSSP*TQGSLA
Trigger: TGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTTGCTAGCGGTTTGCTaGTGGAGGGCGTGTACACTT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLLAVC*WRACTL
Trigger: AAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCATTCTGGAACTCGCTaGGTCACACTGAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFHSGTR*VTLRCS
Trigger: GCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGGGCGGATTTGTCATaGCAAGCCTCAGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFRADLS*QASALL
Trigger: GAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAATAGTGCTGTCACTTaGTGGACTGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQNSAVT*WTVFFL
Trigger: GAGGAAGAAAACAGTCCACCAAGTGACAGCACTATT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTGGGCAGCACCATTCTaGAACTCGCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFWAAPF*NSLSHT
Trigger: AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGATGTAGCCTTGGCATaGGCAGCACCATTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFDVALA*AAPFWN
Trigger: GTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CAA 72 bp TGGCTGAGAAGGAGGCAGCATGACCAGTACAAATTATaGCCCTTGGAGAATGGAGATGTCGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WLRRRQHDQYKL*PLENGDVAFLF
Trigger: GAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAGTCTAAAGTCCTCTTaGAAGATGAGTCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPESLKSS*KMSPEV
Trigger: GACTTCTGGACTCATCTTTCAAGAGGACTTTAGACT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAGGTTTTGAATCTTCCTaGGACACGATATCTTCGATG +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEGFESS*DTISSM
Trigger: CATCGAAGATATCGTGTCTCAGGAAGATTCAAAACC...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCCATCTGAATTATTATaGGAACAACCCCATGTTCGT +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQPSELL*EQPHVR
Trigger: ACGAACATGGGGTTGTTCTCATAATAATTCAGATGG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACGGCAAATCCAATCGTaGTCCCCCAAGCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKRQIQS*SPKPPS
Trigger: GGAAGGCGGCTTGGGGGAGCACGATTGGATTTGCCG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAATAGTGCTGTCACTTaGTGGACTGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPENSAVT*WTVFFL
Trigger: GAGGAAGAAAACAGTCCACCAAGTGACAGCACTATT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACATCAATTGGATAACTaGCCAAATTTCCTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEHQLDN*PNFLWR
Trigger: ACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCTGTCGGAGGCAGACTaGACTGGTATGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLSEAD*TGMCRK
Trigger: TTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACCATCTGAATTATTATaGGAACAACCCCATGTTCGT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEPSELL*EQPHVR
Trigger: ACGAACATGGGGTTGTTCTCATAATAATTCAGATGG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGCAGTCTCACAGAGTaGCCTTTAATTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFSSLTE*PLIVSS
Trigger: GGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATCACAAACACCCTCTTaGAAAGATTGTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPESQTPS*KDCLAL
Trigger: TAGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCATAAAATGTTTGCCTaGTTCATAGATGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQHKMFA*FIDVHF
Trigger: GAAGTGGACATCTATGAATCAGGCAAACATTTTATG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGATCTTTTGTCCTTTaGTTTTTCACTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQRSFVL*FFTCAG
Trigger: TCCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTCTTGCAAATATTTTTaGGTATTTCGCCTTCGTACC +
Preference number: 4 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQSCKYF*VFRLRT
Trigger: GGTACGAAGGCGAAATACCCAAAAATATTTGCAAGA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCCCCCGTGTCTTCACTaGTCAACCATATCTCACAAA +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFPPCLH*STISHK
Trigger: TTTGTGAGATATGGTTGACCAGTGAAGACACGGGGG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCATTAGTTGGGCATGGTaGTATATGCCTGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFISWAW*YMPVAP
Trigger: AGGGGCTACAGGCATATACCACCATGCCCAACTAAT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CTTCTTAGATTACAAAGTGATTTTTCCTGGCCCAGGCTAGCCATTCCAGAATTCCGAACAACACATCCTTaGCCTTGTCACCACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLRLQSDFSWPRLAIPEFRTTHP*PCHHCQ
Trigger: TTGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCG...GAATTCTGGAATGGCTAGCCTGGGCCAGGAAAAATCACTTTGTAATCTAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAGATCTTTTGTCCTTTaGTTTTTCACTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPERSFVL*FFTCAG
Trigger: TCCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATCTTGCAAATATTTTTaGGTATTTCGCCTTCGTACC +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPESCKYF*VFRLRT
Trigger: GGTACGAAGGCGAAATACCCAAAAATATTTGCAAGA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCATTGCCCTTGGAGAATaGAGATGTCGCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFIALGE*RCRFPV
Trigger: AACAGGAAAGCGACATCTCCATTCTCCAAGGGCAAT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCACATGAGGAAAAGATaGCCAGAGCCACTGTACAAT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFHMRKR*PEPLYN
Trigger: ATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACAGGAGTCCTTTAGCTaGCAGACTCTCCCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKQESFS*QTLPVH
Trigger: ATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGGTTTTGAATCTTCCTaGGACACGATATCTTCGATG +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFGFESS*DTISSM
Trigger: CATCGAAGATATCGTGTCTCAGGAAGATTCAAAACC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACATTCTGGAACTCGCTaGGTCACACTGAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKHSGTR*VTLRCS
Trigger: GCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAGGGCGGATTTGTCATaGCAAGCCTCAGCATTGCTC +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKRADLS*QASALL
Trigger: GAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAACTTGTTCCATTTTTaGAGCAGGAGTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFNLFHF*SRSSWS
Trigger: AGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATTGCTTTTTCACTTGTaGTGGAACTTGTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPELLFHL*WNLFHF
Trigger: AAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTATTTCACAGAATGTTaGCAGGAGTCCTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFYFTEC*QESFSW
Trigger: CCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATGGGCAGCACCATTCTaGAACTCGCTGAGTCACACT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKWAAPF*NSLSHT
Trigger: AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CAA 72 bp AGAAGGAGGCAGCATGACCAGTACAAATTATTGCCCTaGGAGAATGGAGATGTCGCTTTCCTGTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: RRRQHDQYKLLP*ENGDVAFLFIE
Trigger: TTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTCACAAACACCCTCTTaGAAAGATTGTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFSQTPS*KDCLAL
Trigger: TAGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACTCTTTTCATTTCCATaGGTACGCTGTCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKLFSFP*VRCRRQ
Trigger: CTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACTGAGGCAAGAAGACTaGTTGAGGCTAGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKLRQED*LRLGVP
Trigger: TGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCTCAG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAAGGTGTGCTGACATCTaGCGTGACGGTGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGERCADI*RDGDPV
Trigger: CACTGGATCACCGTCACGGCAGATGTCAGCACACCT...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGGAGTGTGGGGAGATTaGTGCCAATATCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKGVWGD*CQYLCH
Trigger: ATGGCAGAGATATTGGCACCAATCTCCCCACACTCC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACTGTCGGAGGCAGACTaGACTGGTATGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKLSEAD*TGMCRK
Trigger: TTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp CTTCTTAGATTACAAAGTGATTTTTCCTGGCCCAGGCTAGCCATTCCAGAATTCGGTTTTGAATCTTCCTaGGACACGATATCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LLRLQSDFSWPRLAIPEFGFESS*DTISSM
Trigger: CATCGAAGATATCGTGTCTCAGGAAGATTCAAAACC...GAATTCTGGAATGGCTAGCCTGGGCCAGGAAAAATCACTTTGTAATCTAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAGCAGTCTCACAGAGTaGCCTTTAATTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKSSLTE*PLIVSS
Trigger: GGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACCATTATCCTTTTTCTaGCCCAGCAGTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKPLSFF*PSSLTE
Trigger: CTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR TCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCATAAAATGTTTGCCTaGTTCATAGATGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFHKMFA*FIDVHF
Trigger: GAAGTGGACATCTATGAATCAGGCAAACATTTTATG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGTGTGGGGAGATTGGTaGCAATATCTCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKVWGDW*QYLCHK
Trigger: CTTATGGCAGAGATATTGGCACCAATCTCCCCACAC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAGCACCGCAACACGTCTaGATAGTGCGAGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEAPQHV*IVRVTN
Trigger: GTTGGTTACTCGCACTATGCAGACGTGTTGCGGTGC...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAATTAGTTGGGCATGGTaGTATATGCCTGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKISWAW*YMPVAP
Trigger: AGGGGCTACAGGCATATACCACCATGCCCAACTAAT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CAA 72 bp TGCTGCTTATCTTCTACAACTTCGAACAACACATCCTaGACCTTGTCACCACTGCCAATCTATTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CCLSSTTSNNTS*TLSPLPIYFPQ
Trigger: TTGAGGAAAATAGATTGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCGAAGTTGTAGAAGATAAGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp CTTCTTAGATTACAAAGTGATTTTTCCTGGCCCAGGCTAGCCATTCCAGAATTCAGTCCTCTTGAAAGATaGGTTGATTACAACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLRLQSDFSWPRLAIPEFSPLER*VDYNRC
Trigger: ACACCTGTTGTAATCAACTCATCTTTCAAGAGGACT...GAATTCTGGAATGGCTAGCCTGGGCCAGGAAAAATCACTTTGTAATCTAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAACCACTCTCCGGAAGCTaGACAGACTTTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEPLSGS*TDFRWR
Trigger: TCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGG...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTTGCTTTTTCACTTGTaGTGGAACTTGTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLLFHL*WNLFHF
Trigger: AAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATGCAGCAGGAGTTCCTaGTCTTGGGTAAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKCSRSS*SWVKLV
Trigger: AACCAATTTTACCCAAGACCAGGAACTCCTGCTGCA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAACTTGTTCCATTTTTaGAGCAGGAGTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKNLFHF*SRSSWS
Trigger: AGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATATTTCACAGAATGTTaGCAGGAGTCCTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKYFTEC*QESFSW
Trigger: CCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACATCAATTGGATAACTaGCCAAATTTCCTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKHQLDN*PNFLWR
Trigger: ACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CCA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCCAAAGTGATTTTTCCTaGCCCAGGCTAGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLQSDFS*PRLAIP
Trigger: TGGAATGGCTAGCCTGGGCCAGGAAAAATCACTTTG...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAAAAACCAGTCCAAAGTaGGAAAATCAACCCGCCACT +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEKTSPK*ENQPAT
Trigger: AGTGGCGGGTTGATTTTCTCACTTTGGACTGGTTTT...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCAGACATTTAGTGACCTaGAAAGGTCAGGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLRHLVT*KGQAKG
Trigger: ACCTTTGGCCTGACCTTTTCAGGTCACTAAATGTCT...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGTGATTAAGGATTTTTaGCATTTCCTCCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKVIKDF*HFLQML
Trigger: GAGCATCTGGAGGAAATGGCAAAAATCCTTAATCAC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAACCTGGGCAAACAACATaGCCTAATTCTCTTATGTCG +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEPGQTT*PNSLMS
Trigger: CGACATAAGAGAATTAGGGCATGTTGTTTGCCCAGG...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CCA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATTTGGCATCAGATACTaGCTGCCCTTTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKFGIRY*LPFHKM
Trigger: CATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
3UTR CAA 72 bp TTATCTTCTACAACTTCGAACAACACATCCTTGACCTaGTCACCACTGCCAATCTATTTTCCTCAACAACAT +
Preference number: 4 (lower is better)
Translates to: LSSTTSNNTSLT*SPLPIYFPQQH
Trigger: ATGTTGTTGAGGAAAATAGATTGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCGAAGTTGTAGAAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR TCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAACCATCTGAATTATTATaGGAACAACCCCATGTTCGT +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEPSELL*EQPHVR
Trigger: ACGAACATGGGGTTGTTCTCATAATAATTCAGATGG...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CCA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCTCTTGCAAATATTTTTaGGTATTTCGCCTTCGTACC +
Preference number: 4 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLSCKYF*VFRLRT
Trigger: GGTACGAAGGCGAAATACCCAAAAATATTTGCAAGA...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAGTAACGCCTTTAAATTaGTGCTTATCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEVTPLN*CLSSTT
Trigger: AGTTGTAGAAGATAAGCAGCAATTTAAAGGCGTTAC...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR GCA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAGTATTATTTCTCACATaGTACAAGAAGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEVLFLT*YKKCKP
Trigger: TGGTTTGCACTTCTTGTAGCATGTGAGAAATAATAC...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS TCA 90 bp AGACCCAGCAGAGCCAAGCCCACGGACATCCTCAGCGCACAGTCTTaGTGTAGCCTTGGCATGGGCAGCACCATTCTGGAACTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: RPSRAKPTDILSAQS*CSLGMGSTILELAE
Trigger: CTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGCTGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS-3UTR CAA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACTGGCGAGGCTGGGCTaGAGGAACGCATCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPELARLG*RNASSQ
Trigger: CTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 90 bp AGCCTTGGCATGGGCAGCACCATTCTGGAACTCGCTGAGTCACACTaGGATGCAGCAGAGGTGTGGGATCCTGAACTCAGCTGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLGMGSTILELAESH*DAAEVWDPELSWFP
Trigger: TGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CCA 90 bp AGCCCACGGACATCCTCAGCGCACAGTCTTGATGTAGCCTTGGCATaGGCAGCACCATTCTGGAACTCGCTGAGTCACACTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SPRTSSAHSLDVALA*AAPFWNSLSHTEMQ
Trigger: CTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CCA 90 bp TCAGCGCACAGTCTTGATGTAGCCTTGGCATGGGCAGCACCATTCTaGAACTCGCTGAGTCACACTGAGATGCAGCAGAGGTGTGGGATC +
Preference number: 5 (lower is better)
Translates to: SAHSLDVALAWAAPF*NSLSHTEMQQRCGI
Trigger: GATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCCCTTTGCTAGCGGTTaGCTGATGGAGGGCGTGTAC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQPFASG*LMEGVY
Trigger: GTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGAGGGCGTGTACACTTaGGCATCAGATACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQEGVYT*ASDTGC
Trigger: GCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAACCCTTTGCTAGCGGTTaGCTGATGGAGGGCGTGTAC +
Preference number: 5 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEPFASG*LMEGVY
Trigger: GTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGG...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAGTCTTGATGTAGCCTaGGCATGGGCAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQSLDVA*AWAAPF
Trigger: GAATGGTGCTGCCCATGCCAAGGCTACATCAAGACT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 90 bp AGTCCTTTGTCAAACCCGAGACTTCTCCCTTTGCTAGCGGTTTGCTaGTGGAGGGCGTGTACACTTTGGCATCAGATACTGGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: SPLSNPRLLPLLAVC*WRACTLWHQILAAL
Trigger: AAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS GCA 90 bp CAGGAATCACTTCAACCAGTTTCCACAGGAGTGTGGGGAGATTGGTaGCAATATCTCTGCCATAAGCCCCCGTGTCTTCACTGGTCAACC +
Preference number: 5 (lower is better)
Translates to: QESLQPVSTGVWGDW*QYLCHKPPCLHWST
Trigger: GGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CCA 90 bp CCTCAGGAATCACTTCAACCAGTTTCCACAGGAGTGTGGGGAGATTaGTGCCAATATCTCTGCCATAAGCCCCCGTGTCTTCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: PQESLQPVSTGVWGD*CQYLCHKPPCLHWS
Trigger: TGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CCA 90 bp GCATTGCTCCCTCAGGAATCACTTCAACCAGTTTCCACAGGAGTGTaGGGAGATTGGTGCCAATATCTCTGCCATAAGCCCCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: ALLPQESLQPVSTGV*GDWCQYLCHKPPCL
Trigger: AAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAAAGGAGTGTGGGGAGATaGGTGCCAATATCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPERSVGR*VPISLP
Trigger: TGGCAGAGATATTGGCACCAATCTCCCCACACTCCT...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGAACTTGTTCCATTTTaGCAGCAGGAGTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQELVPF*QQEFLV
Trigger: GACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGCCAAGATAGTGCCATaGCACTCCAGCCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFAKIVP*HSSQGD
Trigger: GTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS GCA 90 bp CAACCAGTTTCCACAGGAGTGTGGGGAGATTGGTGCCAATATCTCTaGCATAAGCCCCCGTGTCTTCACTGGTCAACCATATCTCACAAA +
Preference number: 5 (lower is better)
Translates to: QPVSTGVWGDWCQYL*HKPPCLHWSTISHK
Trigger: TTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGCCTATCTTGTGGTTTaGAATCTTCCTGAGACACGA +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQAYLVV*NLPETR
Trigger: TCGTGTCTCAGGAAGATTCAAAACCACAAGATAGGC...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACTGGCGAGGCTGGGCTaGAGGAACGCATCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKLARLG*RNASSQ
Trigger: CTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCGAGGGCGTGTACACTTaGGCATCAGATACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFEGVYT*ASDTGC
Trigger: GCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTC...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGGCAAGAAGACTGCTaGAGGCTAGGAGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFRQEDC*RLGVPG
Trigger: GCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCTCACAAACACCCTCTaGAAAAGATTGTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLTNTL*KRLFGS
Trigger: AGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAGGAGTGTGGGGAGATaGGTGCCAATATCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFRSVGR*VPISLP
Trigger: TGGCAGAGATATTGGCACCAATCTCCCCACACTCCT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCTCTTGCAAATATTTTaGGGTATTTCGCCTTCGTAC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLLQIF*GISPSY
Trigger: GTACGAAGGCGAAATACCCAAAAATATTTGCAAGAG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGTTGAGACACCCGGTATaGATGGAAATGATTTCTATC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLRHPV*MEMISI
Trigger: GATAGAAATCATTTCCATCAATACCGGGTGTCTCAA...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGAAGATCTTTTGTCCTTaGCTTTTTCACTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQKIFCP*LFHLCW
Trigger: CCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCTT...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp CCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGGTTCCCAGAATACAAATTATTGCCCTaGGAGAATGGAGATGTCGCT +
Preference number: 5 (lower is better)
Translates to: PLAGRLSPCIPKAFRFPEYKLLP*ENGDVA
Trigger: AGCGACATCTCCATTCTCCAAGGGCAATAATTTGTA...TTCTGGGAACCTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS GCA 90 bp TTGCCATTTCCTCCAGATGCTCTAAAATATAGGGCGGATTTGTCATaGCAAGCCTCAGCATTGCTCCCTCAGGAATCACTTCAACCAGTT +
Preference number: 5 (lower is better)
Translates to: LPFPPDALKYRADLS*QASALLPQESLQPV
Trigger: AACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CCA 90 bp GGAGATTGGTGCCAATATCTCTGCCATAAGCCCCCGTGTCTTCACTaGTCAACCATATCTCACAAACACCCTCTTGAAAAGATTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GDWCQYLCHKPPCLH*STISHKHPLEKIVW
Trigger: CCAAACAATCTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TGCCAGGAGTCCTTTAGCTGGCAGACTCTCCCCGTGCATTCCAAAAGCATTCAGCTACTAGTTCATCAATaGGATAACTGGCCAAATTTC +
Preference number: 5 (lower is better)
Translates to: CQESFSWQTLPVHSKSIQLLVHQ*DNWPNF
Trigger: GAAATTTGGCCAGTTATCCAATTGATGAACTAGTAG...CTGAATGCTTTTGGAATGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAAATATAGGGCGGATTaGTCATGCCAAGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFKYRAD*SCQASA
Trigger: TGCTGAGGCTTGGCATGACAAATCCGCCCTATATTT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGCCAAGATAGTGCCATaGCACTCCAGCCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKAKIVP*HSSQGD
Trigger: GTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 90 bp CACTTTGGCATCAGATACTGGCTGCCCTTTCATAAAATGTTTGCCTaGTTCATAGATGTCCACTTCAACCATCTTCCCCATGAACGCAGG +
Preference number: 5 (lower is better)
Translates to: HFGIRYWLPFHKMFA*FIDVHFNHLPHERR
Trigger: CCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAGGCAAGAAGACTGCTaGAGGCTAGGAGTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKRQEDC*RLGVPG
Trigger: GCCTGGAACTCCTAGCCTCAAGCAGTCTTCTTGCCT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCTCACAAACACCCTCTaGAAAAGATTGTTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLTNTL*KRLFGS
Trigger: AGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAGTCTTGATGTAGCCTaGGCATGGGCAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKSLDVA*AWAAPF
Trigger: GAATGGTGCTGCCCATGCCAAGGCTACATCAAGACT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCTACAAATTATTGCCCTaGGAGAATGGAGATGTCGCT +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFYKLLP*ENGDVA
Trigger: AGCGACATCTCCATTCTCCAAGGGCAATAATTTGTA...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCTCTTGCAAATATTTTaGGGTATTTCGCCTTCGTAC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLLQIF*GISPSY
Trigger: GTACGAAGGCGAAATACCCAAAAATATTTGCAAGAG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCAACAGGCTTGGGAATTaGTACTCTTCAACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFNRLGN*YSSTSF
Trigger: GAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTT...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 90 bp AATGTTTGCCTGATTCATAGATGTCCACTTCAACCATCTTCCCCATaGACGCAGGGTTCTTTGGCACTAAAACCTGCTCATAGAATTGAT +
Preference number: 5 (lower is better)
Translates to: NVCLIHRCPLQPSSP*TQGSLALKPAHRID
Trigger: ATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 90 bp AATGTTTGCCTGATTCATAGATGTCCACTTCAACCATCTTCCCCATaGACGCAGGGTTCTTTGGCACTAAAACCTAATTATCCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: NVCLIHRCPLQPSSP*TQGSLALKPNYPGF
Trigger: GAAACCTGGATAATTAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476517.1
CDS-3UTR CAA 90 bp AGGCAGCATGACCAGTACAAATTATTGCCCTTGGAGAATGGAGATGTCGCTTTCCTACTAGTTCATCAATaGGATAACTGGCCAAATTTC +
Preference number: 5 (lower is better)
Translates to: RQHDQYKLLPLENGDVAFLLVHQ*DNWPNF
Trigger: GAAATTTGGCCAGTTATCCAATTGATGAACTAGTAG...GAAAGCGACATCTCCATTCTCCAAGGGCAATAATTTGTACTGGTCATGCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAAATATAGGGCGGATTaGTCATGCCAAGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKKYRAD*SCQASA
Trigger: TGCTGAGGCTTGGCATGACAAATCCGCCCTATATTT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGAACTTGTTCCATTTTaGCAGCAGGAGTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKELVPF*QQEFLV
Trigger: GACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCAGGCAGGTGGATTGGTaGAGCTCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLRQVDW*SSGVQD
Trigger: GTCTTGAACTCCTGAGCTCAACCAATCCACCTGCCT...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAGCCTATCTTGTGGTTTaGAATCTTCCTGAGACACGA +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKAYLVV*NLPETR
Trigger: TCGTGTCTCAGGAAGATTCAAAACCACAAGATAGGC...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAATCGAACAACACATCCTaGACCTTGTCACCACTGCCA +
Preference number: 5 (lower is better)
Translates to: FRIHNSERGFSLIPLEGESNNTS*TLSPLP
Trigger: TGGCAGTGGTGACAAGGTCAAGGATGTGTTGTTCGA...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAACCTTTGCTTTTTCACTaGTGCTGGAACTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKPLLFH*CWNLFH
Trigger: ATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGG...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TTTAGAATTCACAACAGTGAACGAGGTTTTTCCTTAATCCCTTTAGAAGGTGAAGCCTATCTTGTGGTTTaGAATCTTCCTGAGACACGA +
Preference number: 5 (lower is better)
Translates to: FRIHNSERGFSLIPLEGEAYLVV*NLPETR
Trigger: TCGTGTCTCAGGAAGATTCAAAACCACAAGATAGGC...TTCACCTTCTAAAGGGATTAAGGAAAAACCTCGTTCACTGTTGTGAATTCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAATTGAGACACCCGGTATaGATGGAAATGATTTCTATC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKLRHPV*MEMISI
Trigger: GATAGAAATCATTTCCATCAATACCGGGTGTCTCAA...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAACAGGCTTGGGAATTaGTACTCTTCAACAAGTTTC +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKNRLGN*YSSTSF
Trigger: GAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp GAACACATCTGCTGTGAAAAATACAATGTTTGTAGCACTGGGACTCCAAACAAAAAGATCTTTTGTCCTTaGCTTTTTCACTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: EHICCEKYNVCSTGTPNKKIFCP*LFHLCW
Trigger: CCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCTT...TTTGTTTGGAGTCCCAGTGCTACAAACATTGTATTTTTCACAGCAGATGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS-3UTR CAA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCAACACATCCTTGACCTaGTCACCACTGCCAATCTAT +
Preference number: 5 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLNTSLT*SPLPIY
Trigger: ATAGATTGGCAGTGGTGACAAGGTCAAGGATGTGTT...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CAA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCCTCTTGAAAGATGAGTaGATTACAACAGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLLLKDE*ITTGVL
Trigger: CAGCACACCTGTTGTAATCAACTCATCTTTCAAGAG...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS-3UTR CAA 90 bp TCCTTAATCCCTTTAGAAGGTGAAGATTCTAATCAACCATACATGTTAACTCTCAGGTCAGGCCAAAGGTaGAACAGGATGAAAAATGAT +
Preference number: 5 (lower is better)
Translates to: SLIPLEGEDSNQPYMLTLRSGQR*NRMKND
Trigger: ATCATTTTTCATCCTGTTCAACCTTTGGCCTGACCT...GAGAGTTAACATGTATGGTTGATTAGAATCTTCACCTTCTAAAGGGATTAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS CAA 90 bp GAGCCAAGCCCACGGACATCCTCAGCGCACAGTCTTGATGTAGCCTaGGCATGGGCAGCACCATTCTGGAACTCGCTGAGTCACACTGAG +
Preference number: 6 (lower is better)
Translates to: EPSPRTSSAHSLDVA*AWAAPFWNSLSHTE
Trigger: CTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS TCA 72 bp AGAGCCAAGCCCACGGACATCCTCAGCGCACAGTCTTaGTGTAGCCTTGGCATGGGCAGCACCATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: RAKPTDILSAQS*CSLGMGSTILE
Trigger: TTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CAA 72 bp CCACGGACATCCTCAGCGCACAGTCTTGATGTAGCCTaGGCATGGGCAGCACCATTCTGGAACTCGCTGAGT +
Preference number: 6 (lower is better)
Translates to: PRTSSAHSLDVA*AWAAPFWNSLS
Trigger: ACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CCA 72 bp AGTCTTGATGTAGCCTTGGCATGGGCAGCACCATTCTaGAACTCGCTGAGTCACACTGAGATGCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SLDVALAWAAPF*NSLSHTEMQQR
Trigger: CCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CCA 72 bp ACATCCTCAGCGCACAGTCTTGATGTAGCCTTGGCATaGGCAGCACCATTCTGGAACTCGCTGAGTCACACT +
Preference number: 6 (lower is better)
Translates to: TSSAHSLDVALA*AAPFWNSLSHT
Trigger: AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS GCA 72 bp TCCACAGGAGTGTGGGGAGATTGGTGCCAATATCTCTaGCATAAGCCCCCGTGTCTTCACTGGTCAACCATA +
Preference number: 6 (lower is better)
Translates to: STGVWGDWCQYL*HKPPCLHWSTI
Trigger: TATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS GCA 72 bp CTTCAACCAGTTTCCACAGGAGTGTGGGGAGATTGGTaGCAATATCTCTGCCATAAGCCCCCGTGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: LQPVSTGVWGDW*QYLCHKPPCLH
Trigger: GTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 72 bp ACTCAGTCCCTTAAGGTAGTCCTGGCGAGGCTGGGCTaGAGGAACGCATCCAGCCAGTACGATTTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: TQSLKVVLARLG*RNASSQYDFLV
Trigger: AACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 90 bp CCCAATGATACTCAGTCCCTTAAGGTAGTCCTGGCGAGGCTGGGCTaGAGGAACGCATCCAGCCAGTACGATTTTCTTGTTCTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PNDTQSLKVVLARLG*RNASSQYDFLVLLL
Trigger: CAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 90 bp CTGAAGTCCTTTGTCAAACCCGAGACTTCTCCCTTTGCTAGCGGTTaGCTGATGGAGGGCGTGTACACTTTGGCATCAGATACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LKSFVKPETSPFASG*LMEGVYTLASDTGC
Trigger: GCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS TCA 72 bp GAGTCCAGAAGTCGGGAAGTAAAAACCAGTCCAAAGTaGGAAAATCAACCCGCCACTCTCCGGAAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: ESRSREVKTSPK*ENQPATLRKLH
Trigger: GTGCAGCTTCCGGAGAGTGGCGGGTTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274695.8
CDS TCA 72 bp TCAAACCCGAGACTTCTCCCTTTGCTAGCGGTTTGCTaGTGGAGGGCGTGTACACTTTGGCATCAGATACTG +
Preference number: 6 (lower is better)
Translates to: SNPRLLPLLAVC*WRACTLWHQIL
Trigger: CAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS TCA 72 bp ACCACCAGAAGTCGGGAAGTAAAAACCAGTCCAAAGTaGGAAAATCAACCCGCCACTCTCCGGAAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: TTRSREVKTSPK*ENQPATLRKLH
Trigger: GTGCAGCTTCCGGAGAGTGGCGGGTTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613575.4
CDS CCA 72 bp TCACTTCAACCAGTTTCCACAGGAGTGTGGGGAGATTaGTGCCAATATCTCTGCCATAAGCCCCCGTGTCTT +
Preference number: 6 (lower is better)
Translates to: SLQPVSTGVWGD*CQYLCHKPPCL
Trigger: AAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CCA 72 bp CATTTCCATGAGTACGCTGTCGGAGGCAGACTGGACTaGTATGTGCAGAAAAGCGTAGACTCTGGGGTGATT +
Preference number: 6 (lower is better)
Translates to: HFHEYAVGGRLD*YVQKSVDSGVI
Trigger: AATCACCCCAGAGTCTACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 72 bp TTTGTCAAACCCGAGACTTCTCCCTTTGCTAGCGGTTaGCTGATGGAGGGCGTGTACACTTTGGCATCAGAT +
Preference number: 6 (lower is better)
Translates to: FVKPETSPFASG*LMEGVYTLASD
Trigger: ATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CAA 90 bp GATGCTCTAAAATATAGGGCGGATTTGTCATGCCAAGCCTCAGCATaGCTCCCTCAGGAATCACTTCAACCAGTTTCCACAGGAGTGTGG +
Preference number: 6 (lower is better)
Translates to: DALKYRADLSCQASA*LPQESLQPVSTGVW
Trigger: CCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS GCA 72 bp AATATAGGGCGGATTTGTCATGCCAAGCCTCAGCATTaGTCCCTCAGGAATCACTTCAACCAGTTTCCACAG +
Preference number: 6 (lower is better)
Translates to: NIGRICHAKPQH*SLRNHFNQFPQ
Trigger: CTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS GCA 72 bp CCTCCAGATGCTCTAAAATATAGGGCGGATTTGTCATaGCAAGCCTCAGCATTGCTCCCTCAGGAATCACTT +
Preference number: 6 (lower is better)
Translates to: PPDALKYRADLS*QASALLPQESL
Trigger: AAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 72 bp CCATTTCCTCCAGATGCTCTAAAATATAGGGCGGATTaGTCATGCCAAGCCTCAGCATTGCTCCCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: PFPPDALKYRAD*SCQASALLPQE
Trigger: TTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 90 bp ACTTCTCCCTTTGCTAGCGGTTTGCTGATGGAGGGCGTGTACACTTaGGCATCAGATACTGGCTGCCCTTTCATAAAATGTTTGCCTGAT +
Preference number: 6 (lower is better)
Translates to: TSPFASGLLMEGVYT*ASDTGCPFIKCLPD
Trigger: ATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CCA 72 bp TGCCAATATCTCTGCCATAAGCCCCCGTGTCTTCACTaGTCAACCATATCTCACAAACACCCTCTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: CQYLCHKPPCLH*STISHKHPLEK
Trigger: CTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 72 bp AAATATAGGGCGGATTTGTCATGCCAAGCCTCAGCATaGCTCCCTCAGGAATCACTTCAACCAGTTTCCACA +
Preference number: 6 (lower is better)
Translates to: KYRADLSCQASA*LPQESLQPVST
Trigger: TGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CAA 72 bp TTTGCTAGCGGTTTGCTGATGGAGGGCGTGTACACTTaGGCATCAGATACTGGCTGCCCTTTCATAAAATGT +
Preference number: 6 (lower is better)
Translates to: FASGLLMEGVYT*ASDTGCPFIKC
Trigger: ACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000476517.1
CDS CAA 90 bp GGATTTTTGCCATTTCCTCCAGATGCTCTAAAATATAGGGCGGATTaGTCATGCCAAGCCTCAGCATTGCTCCCTCAGGAATCACTTCAA +
Preference number: 6 (lower is better)
Translates to: GFLPFPPDALKYRAD*SCQASALLPQESLQ
Trigger: TTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS CCA 72 bp TGCTGGAACTTGTTCCATTTTTGCAGCAGGAGTTCCTaGTCTTGGGTAAAATTGGTTAATAAACAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: CWNLFHFCSRSS*SWVKLVNKQAW
Trigger: CCAAGCCTGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274695.8
ENST00000378610.1
CDS TCA 72 bp AGCTGTCCAGCCATATATTCTCCATCTGAATTATTATaGGAACAACCCCATGTTCGTATCCAAATTTTCTGT +
Preference number: 6 (lower is better)
Translates to: SCPAIYSPSELL*EQPHVRIQIFC
Trigger: ACAGAAAATTTGGATACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274695.8
ENST00000378610.1
ENST00000613575.4