RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000136807

Ensembl transcript IDs: ENST00000373264.5, ENST00000421939.5, ENST00000480353.5, ENST00000491521.1, ENST00000498339.1

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGCCCTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATTGTaGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCT +
Preference number: 1 (lower is better)
Translates to: RALSPRRVLSPRIGL*VGEGPVPSSTTPGA
Trigger: AGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 90 bp AGCAAGGACAAGACAGCTCCAGTGCCCTCCTGGTCTCTCAGCCAATaGTCCACTCCAGTCCACTCAGCGGGCTGCTCCCAGAGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: SKDKTAPVPSWSLSQ*STPVHSAGCSQSPG
Trigger: CCCTGGGCTCTGGGAGCAGCCCGCTGAGTGGACTGGAGTGGAGCATTGGCTGAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 90 bp ACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTGCCCTCCTaGTCTCTCAGCCAATGCTCCACTCCAGTCCACTCAGCGGGCTGC +
Preference number: 1 (lower is better)
Translates to: TIQKTSKDKTAPVPS*SLSQCSTPVHSAGC
Trigger: GCAGCCCGCTGAGTGGACTGGAGTGGAGCATTGGCTGAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 90 bp AGTCACTGGTGGGCGAGCCCATCCTCCTACCCCATGGAAACCCTCTaGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTGC +
Preference number: 1 (lower is better)
Translates to: SHWWASPSSYPMETL*EPSRKPARTRQLQC
Trigger: GCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTAGGAGGATGGGCTCGCCCACCAGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 90 bp CTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTaGCCTCCTGGTCTCTCAGCCAATGCTCCACTCCAGTCCACTCAG +
Preference number: 1 (lower is better)
Translates to: LWEPSRKPARTRQLQ*PPGLSANAPLQSTQ
Trigger: CTGAGTGGACTGGAGTGGAGCATTGGCTGAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 90 bp TTCTCAGGTGACAGGTCAAATTGTCACTCCAGTGATTTGCCCAGCTaGGTGACCATCGCAGCCACAGCAGCTCACAGCAGGCCCTCACCA +
Preference number: 1 (lower is better)
Translates to: FSGDRSNCHSSDLPS*VTIAATAAHSRPSP
Trigger: TGGTGAGGGCCTGCTGTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAAATCACTGGAGTGACAATTTGACCTGTCACCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR TCA 90 bp ACAGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATaGGATGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGG +
Preference number: 1 (lower is better)
Translates to: TAAHSRPSPIPSPGT*DAFWKAPKRKNRQR
Trigger: CCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 90 bp AGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATaGGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTT +
Preference number: 1 (lower is better)
Translates to: SSQQALTNSLTRDMR*VLEGTQEEKQTKVL
Trigger: AAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 90 bp TCTCTTCCTAACTTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTaGCGCTCCTCAAAGGTTCCCAAGGATTCTACCTTCAGTCTGTTT +
Preference number: 1 (lower is better)
Translates to: SLPNFRLTENVPARM*RSSKVPKDSTFSLF
Trigger: AAACAGACTGAAGGTAGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAAGTTAGGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 90 bp TTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGACAGTTCTaGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGG +
Preference number: 1 (lower is better)
Translates to: FVLWSGSVSVNEGQF*SKVLPTFLPGPTSR
Trigger: CCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACTGTCCTTCATTTACAGAAACTGACCCAGACCACAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 90 bp AGGCGAGCCCTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATaGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGA +
Preference number: 2 (lower is better)
Translates to: RRALSPRRVLSPRIG*WVGEGPVPSSTTPG
Trigger: TCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAGGGCTCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CCA 90 bp GGATTGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTGCTCCAGTGCCCTCCTaGTCTCTCAGCCAATGCTCC +
Preference number: 2 (lower is better)
Translates to: GLWVGEGPVPSSTTPGALAPVPS*SLSQCS
Trigger: GGAGCATTGGCTGAGAGACCAGGAGGGCACTGGAGC...AAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp TTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCGTCCACTCAGCGGGCTaGTCCCAGAGCCCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FRLTENVPARMCRSSKVPVHSAG*SQSPGW
Trigger: CCACCCTGGGCTCTGGGAGCAGCCCGCTGAGTGGAC...GGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CCA 90 bp TTGCCCAGCTGGGTGACCATCGCAGCCACAGCAGCTCACAGCAGGCCCTCACCACCGAGAATAGGATTGTaGGTGGGTGAGGGACCTGTC +
Preference number: 2 (lower is better)
Translates to: LPSWVTIAATAAHSRPSPPRIGL*VGEGPV
Trigger: GACAGGTCCCTCACCCACCCACAATCCTATTCTCGG...TGGTGAGGGCCTGCTGTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 90 bp GTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTaGGCGGTGTGTGCGCAGAACAAAACACACAAGTCCTGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: VPMVRPNLLLTVGEQ*AVCAQNKTHKSWRK
Trigger: TTTCCTCCAGGACTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp TTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCCCCCGTCCAAACTACTaGCACCTTCCAAGACCCCTG +
Preference number: 2 (lower is better)
Translates to: FRLTENVPARMCRSSKVPPRPNY*HLPRPL
Trigger: CAGGGGTCTTGGAAGGTGGCAGTAGTTTGGACGGGG...GGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CCA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCCTTAGAAAAAGTCACTaGTGGGCGAGCCCATCCTCC +
Preference number: 2 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGLRKSH*WASPSS
Trigger: GGAGGATGGGCTCGCCCACCAGTGACTTTTTCTAAG...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp CTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAAGTGGTCTCTCAGCCAATaGTCCACTCCAGTCCACTCA +
Preference number: 2 (lower is better)
Translates to: LLTVGEQLAVCAQNKTHKWSLSQ*STPVHS
Trigger: TGAGTGGACTGGAGTGGAGCATTGGCTGAGAGACCA...CTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CCA 90 bp GGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGCCCATGGAAACCCTCTaGGAACCATCCAGAAAACCA +
Preference number: 2 (lower is better)
Translates to: GSQKTCLPECAAPQRFPRPMETL*EPSRKP
Trigger: TGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGG...CCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR TCA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGACCATCCTTCTCAGGTaGCAGGTCAAATTGTCACTC +
Preference number: 2 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLTILLR*QVKLSL
Trigger: GAGTGACAATTTGACCTGTCACCTGAGAAGGATGGT...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR TCA 90 bp AGGTCTCCGCCTGTAAGAGGATGTAGGAAATTGACCTCCAGAATGTCTCTTCCTCTTCCAAGACCCCTGTaGTCCCTTCACCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: RSPPVRGCRKLTSRMSLPLPRPL*SLHPLP
Trigger: GGGCAGAGGGTGAAGGGATCACAGGGGTCTTGGAAG...AGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR TCA 90 bp CTCACCAATTCCCTCACCAGGGACATGAGATGCGTTCTGGAAGGCACCCAAGAGAGTCAAGACCTCCAGTaGCTTGACAATCAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LTNSLTRDMRCVLEGTQESQDLQ*LDNQVP
Trigger: TGGGACTTGATTGTCAAGTCACTGGAGGTCTTGACT...CTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp CCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTGCCCTGTCTCCACGATaGAAGTCACATAGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: PHGNPLGTIQKTSKDKTAALSPR*KSHSRR
Trigger: TCTTCTGCTATGTGACTTGCATCGTGGAGACAGGGC...AGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR TCA 90 bp CACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCAGACCTCCAGTGACTTaGCAATCAAGTCCCAATGGT +
Preference number: 2 (lower is better)
Translates to: HRKRACQNVPLLKGSQGFRPPVT*QSSPNG
Trigger: ACCATTGGGACTTGATTGTCAAGTCACTGGAGGTCT...GAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 90 bp CCTGGCCCCACTTCAAGGTCTCCGCCTGTAAGAGGATGTAGGAAATaGACCTCCAGAATGTCTCTTCCTAACTTCAGGCTCACAGAAAAC +
Preference number: 2 (lower is better)
Translates to: PGPTSRSPPVRGCRK*TSRMSLPNFRLTEN
Trigger: GTTTTCTGTGAGCCTGAAGTTAGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGGAGACCTTGAAGTGGGGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 90 bp TCTGGGTCAGTTTCTGTAAATGAAGGACAGTTCTGGTCAAAGGTTTaGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGTA +
Preference number: 2 (lower is better)
Translates to: SGSVSVNEGQFWSKV*PTFLPGPTSRSPPV
Trigger: TACAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACTGTCCTTCATTTACAGAAACTGACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp CCGCCTGTAAGAGGATGTAGGAAATTGACCTCCAGAATGTCTCTTCCTAACTTCGGCTCACAGAAAACGTaGCTGCCAGAATGTGCCGCT +
Preference number: 2 (lower is better)
Translates to: PPVRGCRKLTSRMSLPNFGSQKT*LPECAA
Trigger: AGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC...GAAGTTAGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR GCA 90 bp CCGCCTGTAAGAGGATGTAGGAAATTGACCTCCAGAATGTCTCTTCCTAACTTCAGATATAAACTCAAATaGCCTGTCTCCACGATGCAA +
Preference number: 2 (lower is better)
Translates to: PPVRGCRKLTSRMSLPNFRYKLK*PVSTMQ
Trigger: TTGCATCGTGGAGACAGGGCATTTGAGTTTATATCT...GAAGTTAGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CCA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAATCCCAGAGCCCAGGGTaGGGATTAAATAAAATATGC +
Preference number: 2 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQSQSPG*GLNKIC
Trigger: GCATATTTTATTTAATCCCCACCCTGGGCTCTGGGA...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR TCA 72 bp CAGGGTTCTCAGCCCGAGAATAGGATTGTGGGTGGGTaGGGGACCTGTCCCCTCTTCCACCACGCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: QGSQPENRIVGG*GTCPLFHHAGS
Trigger: GCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 72 bp TCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATTGTaGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACG +
Preference number: 3 (lower is better)
Translates to: SPRRVLSPRIGL*VGEGPVPSSTT
Trigger: CGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CAA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGACTGTGGGGGAACAGTaGGCGGTGTGTGCGCAGAAC +
Preference number: 3 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLTVGEQ*AVCAQN
Trigger: GTTCTGCGCACACACCGCCAACTGTTCCCCCACAGT...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 72 bp GACAGGTCAAATTGTCACTCCAGTGATTTGCCCAGCTaGGTGACCATCGCAGCCACAGCAGCTCACAGCAGG +
Preference number: 3 (lower is better)
Translates to: DRSNCHSSDLPS*VTIAATAAHSR
Trigger: CCTGCTGTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAAATCACTGGAGTGACAATTTGACCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 72 bp CTCAGCCAATGCTCCACTCCAGTCCACTCAGCGGGCTaGTCCCAGAGCCCAGGGTGGGGATTAAATAAAATA +
Preference number: 3 (lower is better)
Translates to: LSQCSTPVHSAG*SQSPGWGLNKI
Trigger: TATTTTATTTAATCCCCACCCTGGGCTCTGGGAGCAGCCCGCTGAGTGGACTGGAGTGGAGCATTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 72 bp AAAGTCACTGGTGGGCGAGCCCATCCTCCTACCCCATaGAAACCCTCTGGGAACCATCCAGAAAACCAGCAA +
Preference number: 3 (lower is better)
Translates to: KVTGGRAHPPTP*KPSGNHPENQQ
Trigger: TTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTAGGAGGATGGGCTCGCCCACCAGTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CAA 90 bp AGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATGCGTTGAAGAAACCAAGAGTTaGTGCCAGCCCCAGTGTTTC +
Preference number: 3 (lower is better)
Translates to: SSSQQALTNSLTRDMRCVEETKS*CQPQCF
Trigger: GAAACACTGGGGCTGGCACAAACTCTTGGTTTCTTC...AACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 72 bp CCTGCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTaGGCAGAACAAAACACACAAGTCCTGGAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: PAADCGGTVGGV*AEQNTQVLEEK
Trigger: TTTTTCCTCCAGGACTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR-3UTR CAA 90 bp AGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATGCGTTAAGACCTCCAGTGACTaGACAATCAAGTCCCAATGG +
Preference number: 3 (lower is better)
Translates to: SSSQQALTNSLTRDMRCVKTSSD*TIKSQW
Trigger: CCATTGGGACTTGATTGTCAAGTCACTGGAGGTCTT...AACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 72 bp AACTTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTaGCGCTCCTCAAAGGTTCCCAAGGATTCTACCTTC +
Preference number: 3 (lower is better)
Translates to: NFRLTENVPARM*RSSKVPKDSTF
Trigger: GAAGGTAGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR GCA 72 bp GAATGTCTCTTCCTAACTTCAGGCTCACAGAAAACGTaGCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: ECLFLTSGSQKT*LPECAAPQRFP
Trigger: TGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAAGTTAGGAAGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CCA 72 bp TGGTCTGGGTCAGTTTCTGTAAATGAAGGACAGTTCTaGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: WSGSVSVNEGQF*SKVLPTFLPGP
Trigger: GGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACTGTCCTTCATTTACAGAAACTGACCCAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GGATTGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTTCGCTGTCGATGCGCTaGGCAGGGTCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLWVGEGPVPSSTTPGALSLSMR*AGSSTS
Trigger: GCTGGTGCTGGACCCTGCCCAGCGCATCGACAGCGA...AAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GGATTGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTGGCCAGCCCAAAGTCTaGCAGCTTCAGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: GLWVGEGPVPSSTTPGALGQPKV*QLQDPI
Trigger: GATGGGGTCCTGAAGCTGGCAGACTTTGGGCTGGCC...AAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GGATTGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTGCGGGTCCACATCTCTaGCATGATGCACCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GLWVGEGPVPSSTTPGALAGPHL*HDAPST
Trigger: GGTGCTGGGTGCATCATGGCAGAGATGTGGACCCGC...AAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CGAGCCCTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATTGTGGGTGGGTTGCTCCGTGTTGCCCTaGATGATGGGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RALSPRRVLSPRIGLWVGCSVLP*MMGLRV
Trigger: GACCCGCAGCCCCATCATGCAGGGCAACACGGAGCA...ACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TTGCCCAGCTGGGTGACCATCGCAGCCACAGCAGCTCACAGCAGGCCCTCACCAGCCAACCTTCCTTCCTaGCCCCACTTCAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSWVTIAATAAHSRPSPANLPS*PHFKVS
Trigger: GGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGC...TGGTGAGGGCCTGCTGTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 72 bp CTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATaGTGGGTGGGTGAGGGACCTGTCCCCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LSPRRVLSPRIG*WVGEGPVPSST
Trigger: GGTGGAAGAGGGGACAGGTCCCTCACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGTGTTCTTGGCCAGGCTaGAGGCCCGGGCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSQKTCLPECAAPQRFPRCSWPG*RPGPAQ
Trigger: TTGGGCTGGCCCGGGCCTTCAGCCTGGCCAAGAACA...CCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGCCGTGTTGCCCTGCATaGTGGGGCTGCGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLPCCPA*WGCGST
Trigger: TGTGGACCCGCAGCCCCATCATGCAGGGCAACACGG...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAAGTCACTGGTGGGCGAGCCTTCCAAGACCCCTGTaGTCCCTTCACCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VPSSTTPGALRKSHWWASLPRPL*SLHPLP
Trigger: GGGCAGAGGGTGAAGGGATCACAGGGGTCTTGGAAG...GCTCGCCCACCAGTGACTTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCCGTCATCGCTGTCGATaGGCTGGGCAGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGRHRCR*AGQGPA
Trigger: TGCTGGACCCTGCCCAGCGCATCGACAGCGATGACG...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGGACTGCTGGGTGATCTaGCTGCCCTTCCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLDCWVI*LPFRRG
Trigger: ACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTC...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CGAGCCCTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATTGTGGGTGGGTCGCTCAAACTCCGTCTaGTTGGTGGTGGCGGGATTG +
Preference number: 4 (lower is better)
Translates to: RALSPRRVLSPRIGLWVGRSNSV*LVVAGL
Trigger: CAATCCCGCCACCACCAACCAGACGGAGTTTGAGCG...ACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAATGCGGTGCCTGGCCTTaGACACCTCCCCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQCGAWP*TPPRRC
Trigger: GCACCTTCGGGGAGGTGTTCAAGGCCAGGCACCGCA...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCGTCCACTCAGCGGGCTaGTCCCAGAGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRKRACQNVPLLKGSQGFVHSAG*SQSPGW
Trigger: CCACCCTGGGCTCTGGGAGCAGCCCGCTGAGTGGAC...GAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAAGTCACTGGTGGGCGAGCAGAAGAAGTCGTGGTTaGGGGCGTCATCGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: VPSSTTPGALRKSHWWASRRSRG*GRHRCR
Trigger: TCGACAGCGATGACGCCCTCAACCACGACTTCTTCT...GCTCGCCCACCAGTGACTTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp CACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: HRKRACQNVPLLKGSQGFWWTAG*SGCPSG
Trigger: GCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCA...GAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp AGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATGCGTTAGGATTGTGGGTGGGTaGGGGACCTGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSQQALTNSLTRDMRCVRIVGG*GTCPLF
Trigger: GAAGAGGGGACAGGTCCCTCACCCACCCACAATCCT...AACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCCCCCGTCCAAACTACTaGCACCTTCCAAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGPRPNY*HLPRPL
Trigger: CAGGGGTCTTGGAAGGTGGCAGTAGTTTGGACGGGG...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp TTGCCCAGCTGGGTGACCATCGCAGCCACAGCAGCTCACAGCAGGCCCTCACCAAGTCAAGACCTCCAGTaGCTTGACAATCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPSWVTIAATAAHSRPSPSQDLQ*LDNQVP
Trigger: TGGGACTTGATTGTCAAGTCACTGGAGGTCTTGACT...TGGTGAGGGCCTGCTGTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CTCACCAATTCCCTCACCAGGGACATGAGATGCGTTCTGGAAGGCACCCAAGAGACACCTCCCCGAAGGTaGCTTGGCCGATCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LTNSLTRDMRCVLEGTQETPPRR*LGRSWR
Trigger: TCGCCAAGATCGGCCAAGGCACCTTCGGGGAGGTGT...CTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTTGGCCGGTCTTGCGGTaGCTGGCCTTGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: PHGNPLGTIQKTSKDKTAWPVLR*LALNTS
Trigger: GGAGGTGTTCAAGGCCAGGCACCGCAAGACCGGCCA...AGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp AGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATGCGTTTGGTGGTGGCGGGATTaGGACTCTGGTTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSSQQALTNSLTRDMRCVWWWRD*DSGWWT
Trigger: AGTCCACCAACCAGAGTCGCAATCCCGCCACCACCA...AACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCTCCCCGAAGGTGCCTTaGCCGATCTTGGCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SGQRFCQPSFLAPLQGLRSPKVP*PILASF
Trigger: GAAGCTCGCCAAGATCGGCCAAGGCACCTTCGGGGA...GCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTTGACAATCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAAGTGTCACCACACGGTTaGTGTAGCGGTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDNQVPMVRPNLLLTVGEVSPHG*CSGWAG
Trigger: GCCAGCCCAACCGCTACACCAACCGTGTGGTGACAC...TTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGATTGTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp ACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTGCCCTCCTGGTCTCTCCTGATGAGGGCGAGTTaGTGCTGCTCCGTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TIQKTSKDKTAPVPSWSLLMRAS*CCSVLP
Trigger: GGGCAACACGGAGCAGCACCAACTCGCCCTCATCAG...GAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCGCGGGATTGCGACTCTaGTTGGTGGACTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FRLTENVPARMCRSSKVPAGLRL*LVDCWV
Trigger: CACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGC...GGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAACCGTCTGGTTGGTGGTaGCGGGATTGCGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQPSGWW*RDCDSG
Trigger: ACCAGAGTCGCAATCCCGCCACCACCAACCAGACGG...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAAGCTCCAGTGCCCTCCTaGTCTCTCAGCCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQAPVPS*SLSQCS
Trigger: GGAGCATTGGCTGAGAGACCAGGAGGGCACTGGAGC...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 72 bp GTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTaGGCGGTGTGTGCGCAGAACAAAACACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: VRPNLLLTVGEQ*AVCAQNKTHKS
Trigger: GGACTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp AGCCCATCCTCCTACCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCACTCTACCCAGCAGTCTaGGGGACCATCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSSYPMETLWEPSRKPALYPAV*GTILLR
Trigger: CCTGAGAAGGATGGTCCCTCAGACTGCTGGGTAGAG...TGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTAGGAGGATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTCGAGTCGTACTGCTTTaGCATGGCCGCCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: PHGNPLGTIQKTSKDKTARVVLL*HGRLQR
Trigger: GCGTTGGAGGCGGCCATGGCAAAGCAGTACGACTCG...AGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTAGGGCGAGTTGGTGCTaGTCCGTGTTGCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PHGNPLGTIQKTSKDKTARASWC*SVLPCM
Trigger: CATGCAGGGCAACACGGAGCAGCACCAACTCGCCCT...AGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCGTCGATGAGGTCCAGTaGGTATGGGTCACGCACATA +
Preference number: 4 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGVDEVQ*VWVTHI
Trigger: TATGTGCGTGACCCATACGCACTGGACCTCATCGAC...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp AGCCCATCCTCCTACCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAGTGCCTGCCAGAATGTaGCGCTCCTCAAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SPSSYPMETLWEPSRKPAVPARM*RSSKVP
Trigger: GGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCAC...TGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTAGGAGGATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTTGACAATCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAAGGTTGGTGTAGCGGTTaGGCTGGCTGTTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LDNQVPMVRPNLLLTVGEGWCSG*AGCSWP
Trigger: TGGCCAAGAACAGCCAGCCCAACCGCTACACCAACC...TTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGATTGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTTGACAATCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAATTCACCTTCCGCTTCTaGCCCTTGACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LDNQVPMVRPNLLLTVGEFTFRF*PLTSSS
Trigger: GCTGGAGCTGGTCAAGGGCCAGAAGCGGAAGGTGAA...TTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGATTGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAAGTCCAAACTCCGTCTGGTTaGTGGTGGCGGGATTGCGAC +
Preference number: 4 (lower is better)
Translates to: ADCGGTVGGVCAEQNTQVQTPSG*WWRDCD
Trigger: GTCGCAATCCCGCCACCACCAACCAGACGGAGTTTG...GACTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAACCCATGGAAACCCTCTaGGAACCATCCAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GWVRDLSPLPPRRELLEKPMETL*EPSRKP
Trigger: TGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGG...TTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGCCGAGAATAGGATTGTaGGTGGGTGAGGGACCTGTC +
Preference number: 4 (lower is better)
Translates to: GSQKTCLPECAAPQRFPRPRIGL*VGEGPV
Trigger: GACAGGTCCCTCACCCACCCACAATCCTATTCTCGG...CCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAATCGTGTTTTAGAAGCTaGAGGATCTTGATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GWVRDLSPLPPRRELLEKSCFRS*RILISR
Trigger: GCGGGAGATCAAGATCCTTCAGCTTCTAAAACACGA...TTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAAACCATCCTTCTCAGGTaGCAGGTCAAATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GWVRDLSPLPPRRELLEKTILLR*QVKLSL
Trigger: GAGTGACAATTTGACCTGTCACCTGAGAAGGATGGT...TTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp AGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCTCCACCGAGTCGTACTaGTTTGCCATGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSGQRFCQPSFLAPLQGLSTESY*FAMAAS
Trigger: GGAGGCGGCCATGGCAAAGCAGTACGACTCGGTGGA...GAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGCTCTTCCGGCGCGGTGGTaGCAAGTACTCGAACATGGA +
Preference number: 4 (lower is better)
Translates to: PHGNPLGTIQKTSKDKTALPARW*QVLEHG
Trigger: TCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAG...AGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCGCCCTGTCTCCACGATaGAAGTCACATAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGALSPR*KSHSRR
Trigger: TCTTCTGCTATGTGACTTGCATCGTGGAGACAGGGC...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TACCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGTTCAGAGCCACCTTCTaGCCGGTCTTGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YPMETLWEPSRKPARTRQFRATF*PVLRCL
Trigger: CAGGCACCGCAAGACCGGCCAGAAGGTGGCTCTGAA...CTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTCACCAATTCCCTCACCAGGGACATGAGATGCGTTCTGGAAGGCACCCAAGAGGACCAGAAGAAGTCGTaGTTGAGGGCGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LTNSLTRDMRCVLEGTQEDQKKS*LRASSL
Trigger: CAGCGATGACGCCCTCAACCACGACTTCTTCTGGTC...CTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGAGAAAAAGTCACTGGTaGGCGAGCCCATCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GSQKTCLPECAAPQRFPRRKSHW*ASPSSY
Trigger: GTAGGAGGATGGGCTCGCCCACCAGTGACTTTTTCT...CCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp ACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTTCCACATCTCTGCCATaGTGCACCCAGCACCCCACA +
Preference number: 4 (lower is better)
Translates to: TENVPARMCRSSKVPKDSSTSLP*CTQHPT
Trigger: TGTGGGGTGCTGGGTGCATCATGGCAGAGATGTGGA...AGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp AGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCCAGCAGCTTGTCGATaGGGTCCAGTGCGTATGGGT +
Preference number: 4 (lower is better)
Translates to: SSGQRFCQPSFLAPLQGLPAACR*GPVRMG
Trigger: ACCCATACGCACTGGACCTCATCGACAAGCTGCTGG...GAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGAAATTGTCACTCCAGTaGTTTGCCCAGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLKLSLQ*FAQLGD
Trigger: GTCACCCAGCTGGGCAAATCACTGGAGTGACAATTT...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TTCAGGCTCACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCTGGTCTCTCAGCCAATaGTCCACTCCAGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: FRLTENVPARMCRSSKVPWSLSQ*STPVHS
Trigger: TGAGTGGACTGGAGTGGAGCATTGGCTGAGAGACCA...GGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGGGTATATACTACCCTTaGAGCGGTTATAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLGIYYP*SGYRGK
Trigger: CTTCCCCCTATAACCGCTGCAAGGGTAGTATATACC...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp AGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCGGCTCACAGAAAACGTaGCTGCCAGAATGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSGQRFCQPSFLAPLQGLGSQKT*LPECAA
Trigger: AGCGGCACATTCTGGCAGGCACGTTTTCTGTGAGCC...GAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CAGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTGAGGTCCAGTGCGTATaGGTCACGCACATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QFWSKVLPTFLPGPTSRSEVQCV*VTHIGL
Trigger: AAGGCCTATGTGCGTGACCCATACGCACTGGACCTC...AGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp ACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTGCCCTCCTGGTCTCTCAGACCTCCAGTGACTTaGCAATCAAGTCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: TIQKTSKDKTAPVPSWSLRPPVT*QSSPNG
Trigger: ACCATTGGGACTTGATTGTCAAGTCACTGGAGGTCT...GAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAACCGTTAAGCAGCATCTaGATCACCCTCTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQPLSSI*ITLLIS
Trigger: TGAGATCAAGAGGGTGATGCAGATGCTGCTTAACGG...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TACCCCATGGAAACCCTCTGGGAACCATCCAGAAAACCAGCAAGGACAAGACAGACAATCAAGTCCCAATaGTCAGGCCCAACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YPMETLWEPSRKPARTRQTIKSQ*SGPTCC
Trigger: GCAGCAGGTTGGGCCTGACCATTGGGACTTGATTGT...CTGTCTTGTCCTTGCTGGTTTTCTGGATGGTTCCCAGAGGGTTTCCATGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp TGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATTATATTTGCCCAGCTGGGTaGCCATCGCAGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: CVLEGTQEEKQTKVLSNYICPAG*PSQPQQ
Trigger: CTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAAAT...ATAATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp CTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAAGGAGGATGTAGGAAATTaGCCTCCAGAATGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLTVGEQLAVCAQNKTHKEDVGN*PPECLF
Trigger: GAAGAGACATTCTGGAGGTCAATTTCCTACATCCTC...CTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp AGGTCTCCGCCTGTAAGAGGATGTAGGAAATTGACCTCCAGAATGTCTCTTCCTCACAGAAAACGTGCCTaGCAGAATGTGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSPPVRGCRKLTSRMSLPHRKRA*QNVPLL
Trigger: GAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGTG...AGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp ACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTTCTGGTCAAAGGTTTTaGCAACCTTCCTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TENVPARMCRSSKVPKDSSGQRF*QPSFLA
Trigger: GGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGA...AGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAAGTCCCAGAGCCCAGGGTaGGGATTAAATAAAATATGC +
Preference number: 4 (lower is better)
Translates to: LLTVGEQLAVCAQNKTHKSQSPG*GLNKIC
Trigger: GCATATTTTATTTAATCCCCACCCTGGGCTCTGGGA...CTTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp CTCACCAATTCCCTCACCAGGGACATGAGATGCGTTCTGGAAGGCACCCAAGAGTGGCCTTTTGTGTTGTaGTCTGGGTCAGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LTNSLTRDMRCVLEGTQEWPFVL*SGSVSV
Trigger: TACAGAAACTGACCCAGACCACAACACAAAAGGCCA...CTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp CAGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTACAGTTGGCGGTGTGTaGGCAGAACAAAACACACAA +
Preference number: 4 (lower is better)
Translates to: QFWSKVLPTFLPGPTSRSTVGGV*AEQNTQ
Trigger: TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGT...AGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp AGATGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATAACATGGACGTCAGGTaGGTGGAGAGCATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RCVLEGTQEEKQTKVLSNNMDVR*VESMPL
Trigger: CAAGGGCATGCTCTCCACCCACCTGACGTCCATGTT...ATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp TGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATTATACTCCGTCTGGTTGGTaGTGGCGGGATTGCGACTCT +
Preference number: 4 (lower is better)
Translates to: CVLEGTQEEKQTKVLSNYTPSGW*WRDCDS
Trigger: AGAGTCGCAATCCCGCCACCACCAACCAGACGGAGT...ATAATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp TACTTTTACTGGCCTTTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGAATGGAGCCGCAGAGCTaGCTGATGAGGGCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: YFYWPFVLWSGSVSVNEGMEPQS*LMRASW
Trigger: CCAACTCGCCCTCATCAGTCAGCTCTGCGGCTCCAT...TCCTTCATTTACAGAAACTGACCCAGACCACAACACAAAAGGCCAGTAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp ATGAGAGATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGATCCGCTTCTGGCCCTTaGCCAGCTCCAGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: MRDINSNALSPRCKSHSRSASGP*PAPAFR
Trigger: ACGAAAAGCTGGAGCTGGTCAAGGGCCAGAAGCGGA...TCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGAAGAAAAATGAGGGCGAGTTGGTaGTGCTCCGTGTTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DINSNALSPRCKSHSRRKMRASW*CSVLPC
Trigger: GCAGGGCAACACGGAGCAGCACCAACTCGCCCTCAT...TTTTCTTCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp TACTTTTACTGGCCTTTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGACTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YFYWPFVLWSGSVSVNEGLWLVD*WVIWLP
Trigger: GGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAG...TCCTTCATTTACAGAAACTGACCCAGACCACAACACAAAAGGCCAGTAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAATATAGGGGGAAGCTTTaGTTCGACAAATCTCAATCA +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQYRGKL*FDKSQS
Trigger: TGATTGAGATTTGTCGAACCAAAGCTTCCCCCTATA...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR TCA 90 bp TACTTTTACTGGCCTTTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGACCCTCACCAGGGACATaGGATGCGTTCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: YFYWPFVLWSGSVSVNEGPSPGT*DAFWKA
Trigger: TGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGG...TCCTTCATTTACAGAAACTGACCCAGACCACAACACAAAAGGCCAGTAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATTATGGAAGAGAACATGAGCCCAGCAAGGTCATaGTCGCAGAAGTCGAACACC +
Preference number: 4 (lower is better)
Translates to: APKRKNRQRSFPIMEENMSPARS*SQKSNT
Trigger: GGTGTTCGACTTCTGCGAGCATGACCTTGCTGGGCT...CATGTTCTCTTCCATAATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GCTGCTGACTGTGGGGGAACAGTTGGCGGTGTGTGCGCAGAACAAAACACACAACGAGCTTCTCGTATTTaGAAACTTCATCACAAAAAG +
Preference number: 4 (lower is better)
Translates to: AADCGGTVGGVCAEQNTQRASRI*KLHHKK
Trigger: CTTTTTGTGATGAAGTTTCCAAATACGAGAAGCTCG...TTGTGTGTTTTGTTCTGCGCACACACCGCCAACTGTTCCCCCACAGTCAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp AGATGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATATAGTTGTCCACGTTTaGCCACACCTCAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: RCVLEGTQEEKQTKVLSNIVVHV*PHLRGD
Trigger: ATCACCCCTGAGGTGTGGCCAAACGTGGACAACTAT...ATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAAGCCCTTCCGGCGCGGTaGTGCCAAGTACTCGAACAT +
Preference number: 4 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQALPAR*CQVLEH
Trigger: ATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGC...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp GATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGAAGAAAAAGTGATTTGCCCAGCTaGGTGACCATCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: DINSNALSPRCKSHSRRKSDLPS*VTIAAT
Trigger: TGTGGCTGCGATGGTCACCCAGCTGGGCAAATCACT...TTTTCTTCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
3UTR CAA 72 bp ACTTCAAGGTCTCCGCCTGTAAGAGGATGTAGGAAATaGACCTCCAGAATGTCTCTTCCTAACTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSRSPPVRGCRK*TSRMSLPNFRL
Trigger: GAGCCTGAAGTTAGGAAGAGACATTCTGGAGGTCAATTTCCTACATCCTCTTACAGGCGGAGACCTTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp ATGAGAGATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGAGCCTTCATGTCCCTATaGAGGATCTTGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MRDINSNALSPRCKSHSRAFMSL*RILFLW
Trigger: CCACAGAAACAAGATCCTGCATAGGGACATGAAGGC...TCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATCTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAATGCCTTGGCCGATCTTaGCGAGCTTCTCGTATTTGG +
Preference number: 4 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQCLGRS*RASRIW
Trigger: CCAAATACGAGAAGCTCGCCAAGATCGGCCAAGGCA...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAACCAAGTACTCGAACATaGACGTCAGGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQPSTRT*TSGGWR
Trigger: TCTCCACCCACCTGACGTCCATGTTCGAGTACTTGG...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAACTTAGAAAAAGTCACTaGTGGGCGAGCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQLRKSH*WASPSS
Trigger: GGAGGATGGGCTCGCCCACCAGTGACTTTTTCTAAG...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CCA 90 bp AGATGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATAATGAAGGACAGTTCTaGTCAAAGGTTTTGCCAACC +
Preference number: 4 (lower is better)
Translates to: RCVLEGTQEEKQTKVLSNNEGQF*SKVLPT
Trigger: GGTTGGCAAAACCTTTGACCAGAACTGTCCTTCATT...ATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR GCA 90 bp GCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATTATGGAAGAGAACATGAGATATAAACTCAAATaGCCTGTCTCCACGATGCAA +
Preference number: 4 (lower is better)
Translates to: APKRKNRQRSFPIMEENMRYKLK*PVSTMQ
Trigger: TTGCATCGTGGAGACAGGGCATTTGAGTTTATATCT...CATGTTCTCTTCCATAATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp GGCGCGTCCCGCTGCATGGGCCCGGGCCGCCGCTGCTGCCGAAGCTaGTGCCGCTCTGGCGCCCGATCCGGGGCCAGCCGCAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GASRCMGPGRRCCRS*CRSGARSGASRSAL
Trigger: CAGGGCACTGCGGCTGGCCCCGGATCGGGCGCCAGAGCGGCAGCAGCTTCGGCAGCAGCGGCGGCCCGGGCCCATGCAGCGGGACGCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421939.5
CDS GCA 90 bp GCGTCCCGCTGCATGGGCCCGGGCCGCCGCTGCTGCCGAAGCTGCTaGCGCTCTGGCGCCCGATCCGGGGCCAGCCGCAGTGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ASRCMGPGRRCCRSC*RSGARSGASRSALL
Trigger: GAGCAGGGCACTGCGGCTGGCCCCGGATCGGGCGCCAGAGCGGCAGCAGCTTCGGCAGCAGCGGCGGCCCGGGCCCATGCAGCGGGACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421939.5
CDS CCA 90 bp CCCTTCCGGCGCGGTGGTGCCAAGTACTCGAACATGGACGTCAGGTaGGTGGAGAGCATGCCCTTGAGGTCGGAGGGCATGGGGTCGGAC +
Preference number: 5 (lower is better)
Translates to: PFRRGGAKYSNMDVR*VESMPLRSEGMGSD
Trigger: GTCCGACCCCATGCCCTCCGACCTCAAGGGCATGCTCTCCACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp TCCGTCTGGTTGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCCTTCCGGCGCGGTGGTGCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: SVWLVVAGLRLWLVD*WVIWLPFRRGGAKY
Trigger: GTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp ATGCCCTTGAGGTCGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTaGTTGAGGGCGTCATCGCTGTCGATGCGCTGGGCAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: MPLRSEGMGSDQKKS*LRASSLSMRWAGSS
Trigger: GCTGGACCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCGACCTCAAGGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp GTCTGGTTGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTaGGTGATCTGGCTGCCCTTCCGGCGCGGTGGTGCCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: VWLVVAGLRLWLVDC*VIWLPFRRGGAKYS
Trigger: CGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp ACGCGCTCAAACTCCGTCTGGTTGGTGGTGGCGGGATTGCGACTCTaGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGT +
Preference number: 5 (lower is better)
Translates to: TRSNSVWLVVAGLRL*LVDCWVIWLPFRRG
Trigger: ACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 90 bp GGTTGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGGCGCGGTGGTGCCAAGTACTCGAACA +
Preference number: 5 (lower is better)
Translates to: GWWWRDCDSGWWTAG*SGCPSGAVVPSTRT
Trigger: TGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp GTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGTGGTaGCAAGTACTCGAACATGGACGTCAGGTGGGTGGAGAGCATGCC +
Preference number: 5 (lower is better)
Translates to: VGGLLGDLAALPARW*QVLEHGRQVGGEHA
Trigger: GGCATGCTCTCCACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp GTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTGGGTGATCTaGCTGCCCTTCCGGCGCGGTGGTGCCAAGTACTCGAACATGGAC +
Preference number: 5 (lower is better)
Translates to: VVAGLRLWLVDCWVI*LPFRRGGAKYSNMD
Trigger: GTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp CTAGTGGCAAGCGCCGGCCCTCAGAAGACGCGCTCAAACTCCGTCTaGTTGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LVASAGPQKTRSNSV*LVVAGLRLWLVDCW
Trigger: CCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGCCGGCGCTTGCCACTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 90 bp CGCTGTCGATGCGCTGGGCAGGGTCCAGCACCAGCAGCTTGTCGATaGGGTCCAGTGCGTATGGGTCACGCACATAGGCCTTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RCRCAGQGPAPAACR*GPVRMGHAHRPSAC
Trigger: ACAGGCTGAAGGCCTATGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCTGCCCAGCGCATCGACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CCA 90 bp GACCAGAAGAAGTCGTGGTTGAGGGCGTCATCGCTGTCGATGCGCTaGGCAGGGTCCAGCACCAGCAGCTTGTCGATGAGGTCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: DQKKSWLRASSLSMR*AGSSTSSLSMRSSA
Trigger: CGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 90 bp CTGGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGTaGTGCCAAGTACTCGAACATGGACGTCAGGTGGGTGGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LVGGLLGDLAALPAR*CQVLEHGRQVGGEH
Trigger: ATGCTCTCCACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 90 bp TTGTCCACGTTTGGCCACACCTCAGGGGTGATGGAGCCGCAGAGCTaGCTGATGAGGGCGAGTTGGTGCTGCTCCGTGTTGCCCTGCATG +
Preference number: 5 (lower is better)
Translates to: LSTFGHTSGVMEPQS*LMRASWCCSVLPCM
Trigger: CATGCAGGGCAACACGGAGCAGCACCAACTCGCCCTCATCAGTCAGCTCTGCGGCTCCATCACCCCTGAGGTGTGGCCAAACGTGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS-3UTR CAA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCCCGAGTCGTACTGCTTaGCCATGGCCGCCTCCAACG +
Preference number: 5 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGPSRTA*PWPPPT
Trigger: CGTTGGAGGCGGCCATGGCAAAGCAGTACGACTCGG...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp AGCAGCTCACAGCAGGCCCTCACCAATTCCCTCACCAGGGACATGAGATGCGTTGTGGAGAGCATGCCCTaGAGGTCGGAGGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: SSSQQALTNSLTRDMRCVVESMP*RSEGMG
Trigger: CCCCATGCCCTCCGACCTCAAGGGCATGCTCTCCAC...AACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAGGGCCTGCTGTGAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp CTGGCTGTTCTTGGCCAGGCTGAAGGCCCGGGCCAGCCCAAAGTCTaGCAGCTTCAGGACCCCATCACGAGTGATAAGCACATTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LAVLGQAEGPGQPKV*QLQDPITSDKHISS
Trigger: GCTGCTAATGTGCTTATCACTCGTGATGGGGTCCTGAAGCTGGCAGACTTTGGGCTGGCCCGGGCCTTCAGCCTGGCCAAGAACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS CCA 90 bp GGCAGGGTCCAGCACCAGCAGCTTGTCGATGAGGTCCAGTGCGTATaGGTCACGCACATAGGCCTTCAGCCTGTCCTTCACCTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GRVQHQQLVDEVQCV*VTHIGLQPVLHLPL
Trigger: AAGCGGAAGGTGAAGGACAGGCTGAAGGCCTATGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS-3UTR CAA 90 bp TGTCACTCCAGTGATTTGCCCAGCTGGGTGACCATCGCAGCCACAGCAGCTCACTTGGTGGTGGCGGGATaGCGACTCTGGTTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: CHSSDLPSWVTIAATAAHLVVAG*RLWLVD
Trigger: GTCCACCAACCAGAGTCGCAATCCCGCCACCACCAA...GTGAGCTGCTGTGGCTGCGATGGTCACCCAGCTGGGCAAATCACTGGAGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp CTCACCAATTCCCTCACCAGGGACATGAGATGCGTTCTGGAAGGCACCCAAGAGCTCCCCGAAGGTGCCTaGGCCGATCTTGGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: LTNSLTRDMRCVLEGTQELPEGA*ADLGEL
Trigger: AAGCTCGCCAAGATCGGCCAAGGCACCTTCGGGGAG...CTCTTGGGTGCCTTCCAGAACGCATCTCATGTCCCTGGTGAGGGAATTGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp TCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAACAGTTGGCAGCCCGAGAATAGGATaGTGGGTGGGTGAGGGACCT +
Preference number: 5 (lower is better)
Translates to: SSPNGQAQPAADCGGTVGSPRIG*WVGEGP
Trigger: AGGTCCCTCACCCACCCACAATCCTATTCTCGGGCT...GCCAACTGTTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp CGAGCCCTGTCCCCACGCAGGGTTCTCAGCCCGAGAATAGGATTGTGGGTGGGTATCTGCATCACCCTCTaGATCTCAGACAGCGTGAAC +
Preference number: 5 (lower is better)
Translates to: RALSPRRVLSPRIGLWVGICITL*ISDSVN
Trigger: GTTCACGCTGTCTGAGATCAAGAGGGTGATGCAGAT...ACCCACCCACAATCCTATTCTCGGGCTGAGAACCCTGCGTGGGGACAGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGGTGCCTTGGCCGATCTaGGCGAGCTTCTCGTATTTG +
Preference number: 5 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLVPWPI*ASFSYL
Trigger: CAAATACGAGAAGCTCGCCAAGATCGGCCAAGGCAC...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp ACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTACCTTCTGGCCGGTCTaGCGGTGCCTGGCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TENVPARMCRSSKVPKDSTFWPV*RCLALN
Trigger: GTTCAAGGCCAGGCACCGCAAGACCGGCCAGAAGGT...AGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp TCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCTCAAACTCCGTCTGGTaGGTGGTGGCGGGATTGCGA +
Preference number: 5 (lower is better)
Translates to: SGQRFCQPSFLAPLQGLRSNSVW*VVAGLR
Trigger: TCGCAATCCCGCCACCACCAACCAGACGGAGTTTGA...GCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp AGTTCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCACTGTGGGGGAACAGTaGGCGGTGTGTGCGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SSGQRFCQPSFLAPLQGLTVGEQ*AVCAQN
Trigger: GTTCTGCGCACACACCGCCAACTGTTCCCCCACAGT...GAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 90 bp GCACATAGGCCTTCAGCCTGTCCTTCACCTTCCGCTTCTGGCCCTTaGCCAGCTCCAGCTTTTCGTACAGCTCATAGTTGTCCACGTTTG +
Preference number: 5 (lower is better)
Translates to: AHRPSACPSPSASGP*PAPAFRTAHSCPRL
Trigger: CAAACGTGGACAACTATGAGCTGTACGAAAAGCTGGAGCTGGTCAAGGGCCAGAAGCGGAAGGTGAAGGACAGGCTGAAGGCCTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS-3UTR CAA 90 bp GGGTGGGTGAGGGACCTGTCCCCTCTTCCACCACGCCGGGAGCTCTTAGAAAAATCAGACAGCGTGAACTaGACCAAAACATTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: GWVRDLSPLPPRRELLEKSDSVN*TKTLLN
Trigger: GTTGAGCAATGTTTTGGTCAAGTTCACGCTGTCTGA...TTTTTCTAAGAGCTCCCGGCGTGGTGGAAGAGGGGACAGGTCCCTCACCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp AGATGCGTTCTGGAAGGCACCCAAGAGGAAAAACAGACAAAGGTCCTTTCCAATTTGCGGTGCCTGGCCTaGAACACCTCCCCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RCVLEGTQEEKQTKVLSNLRCLA*NTSPKV
Trigger: CACCTTCGGGGAGGTGTTCAAGGCCAGGCACCGCAA...ATTGGAAAGGACCTTTGTCTGTTTTTCCTCTTGGGTGCCTTCCAGAACGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp ACCATCCAGAAAACCAGCAAGGACAAGACAGCTCCAGTGCCCTCCTGGTCTCTCTTCTGGTCAAAGGTTTaGCCAACCTTCCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: TIQKTSKDKTAPVPSWSLFWSKV*PTFLPG
Trigger: GCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGAA...GAGAGACCAGGAGGGCACTGGAGCTGTCTTGTCCTTGCTGGTTTTCTGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp CTTGACAATCAAGTCCCAATGGTCAGGCCCAACCTGCTGCTGACTGTGGGGGAAAACTTGACCAAAACATaGCTCAACAGCCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LDNQVPMVRPNLLLTVGENLTKT*LNSPAR
Trigger: CCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTT...TTCCCCCACAGTCAGCAGCAGGTTGGGCCTGACCATTGGGACTTGATTGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp TCTGGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCAAGACCTCCAGTGACTaGACAATCAAGTCCCAATGG +
Preference number: 5 (lower is better)
Translates to: SGQRFCQPSFLAPLQGLRKTSSD*TIKSQW
Trigger: CCATTGGGACTTGATTGTCAAGTCACTGGAGGTCTT...GCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp AGCGTGAACTTGACCAAAACATTGCTCAACAGCCCAGCAAGGTCATaGTCGCAGAAGTCGAACACCAGGTATATACTACCCTTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: SVNLTKTLLNSPARS*SQKSNTRYILPLQR
Trigger: CCGCTGCAAGGGTAGTATATACCTGGTGTTCGACTTCTGCGAGCATGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS-3UTR CAA 90 bp ATGAGAGATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGATGGTGCTGCTCCGTGTaGCCCTGCATGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: MRDINSNALSPRCKSHSRWCCSV*PCMMGL
Trigger: CAGCCCCATCATGCAGGGCAACACGGAGCAGCACCA...TCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATCTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp GGTCAAAGGTTTTGCCAACCTTCCTTCCTGGCCCCACTTCAAGGTCTCCGCCTGAGAGGATGTAGGAAATaGACCTCCAGAATGTCTCTT +
Preference number: 5 (lower is better)
Translates to: GQRFCQPSFLAPLQGLRLRGCRK*TSRMSL
Trigger: AAGAGACATTCTGGAGGTCAATTTCCTACATCCTCT...CAGGCGGAGACCTTGAAGTGGGGCCAGGAAGGAAGGTTGGCAAAACCTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp ATGAGAGATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGAGGATTGCGACTCTGGTaGGTGGACTGCTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: MRDINSNALSPRCKSHSRGLRLW*VDCWVI
Trigger: GATCACCCAGCAGTCCACCAACCAGAGTCGCAATCC...TCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATCTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 90 bp CAAGGTCATGCTCGCAGAAGTCGAACACCAGGTATATACTACCCTTaGAGCGGTTATAGGGGGAAGCTTTGGTTCGACAAATCTCAATCA +
Preference number: 5 (lower is better)
Translates to: QGHARRSRTPGIYYP*SGYRGKLWFDKSQS
Trigger: TGATTGAGATTTGTCGAACCAAAGCTTCCCCCTATAACCGCTGCAAGGGTAGTATATACCTGGTGTTCGACTTCTGCGAGCATGACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS-3UTR CAA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAAACTGATGAGGGCGAGTaGGTGCTGCTCCGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQTDEGE*VLLRVA
Trigger: GGCAACACGGAGCAGCACCAACTCGCCCTCATCAGT...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp TACTTTTACTGGCCTTTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGATTCCGCTTCTGGCCCTaGACCAGCTCCAGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: YFYWPFVLWSGSVSVNEGFRFWP*TSSSFS
Trigger: CGAAAAGCTGGAGCTGGTCAAGGGCCAGAAGCGGAA...TCCTTCATTTACAGAAACTGACCCAGACCACAACACAAAAGGCCAGTAAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp ATTCAACTTTTAATTCTAACGGACCAAACTGTGCCCAGGAATGTCTCCAAACAATCCAGCACCAGCAGCTaGTCGATGAGGTCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: IQLLILTDQTVPRNVSKQSSTSS*SMRSSA
Trigger: CGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGA...TTGTTTGGAGACATTCCTGGGCACAGTTTGGTCCGTTAGAATTAAAAGTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp GATATAAACTCAAATGCCCTGTCTCCACGATGCAAGTCACATAGCAGAAGAAAACAGAAGAAGTCGTGGTaGAGGGCGTCATCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: DINSNALSPRCKSHSRRKQKKSW*RASSLS
Trigger: CGACAGCGATGACGCCCTCAACCACGACTTCTTCTG...TTTTCTTCTGCTATGTGACTTGCATCGTGGAGACAGGGCATTTGAGTTTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 90 bp CGACAAATCTCAATCAAGTTGACCACATTCTCGTGTTTTAGAAGCTaGAGGATCTTGATCTCCCGCAAGGCTGTAATGGGGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: RQISIKLTTFSCFRS*RILISRKAVMGNWV
Trigger: CACCCAGTTCCCCATTACAGCCTTGCGGGAGATCAAGATCCTTCAGCTTCTAAAACACGAGAATGTGGTCAACTTGATTGAGATTTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491521.1
CDS-3UTR CAA 90 bp ACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTGCGAGCTTCTCGTATTaGGAAACTTCATCACAAAAA +
Preference number: 5 (lower is better)
Translates to: TENVPARMCRSSKVPKDSASFSY*ETSSQK
Trigger: TTTTTGTGATGAAGTTTCCAAATACGAGAAGCTCGC...AGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp ACAGAAAACGTGCCTGCCAGAATGTGCCGCTCCTCAAAGGTTCCCAAGGATTCTCAAATCTCAATCAAGTaGACCACATTCTCGTGTTTT +
Preference number: 5 (lower is better)
Translates to: TENVPARMCRSSKVPKDSQISIK*TTFSCF
Trigger: AAAACACGAGAATGTGGTCAACTTGATTGAGATTTG...AGAATCCTTGGGAACCTTTGAGGAGCGGCACATTCTGGCAGGCACGTTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS-3UTR CAA 90 bp TACTTTTACTGGCCTTTTGTGTTGTGGTCTGGGTCAGTTTCTGTAAATGAAGGAGAAGAAACCAAGAGTTaGTGCCAGCCCCAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: YFYWPFVLWSGSVSVNEGEETKS*CQPQCF
Trigger: GAAACACTGGGGCTGGCACAAACTCTTGGTTTCTTC...TCCTTCATTTACAGAAACTGACCCAGACCACAACACAAAAGGCCAGTAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp GTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTaGGTGATCTGGCTGCCCTTCCGGCGCGGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: VVAGLRLWLVDC*VIWLPFRRGGA
Trigger: GGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 90 bp CCCTTGAGGTCGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTGGTaGAGGGCGTCATCGCTGTCGATGCGCTGGGCAGGGTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: PLRSEGMGSDQKKSW*RASSLSMRWAGSST
Trigger: GGTGCTGGACCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCGACCTCAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 72 bp CGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTGGTTaGGGGCGTCATCGCTGTCGATGCGCTGGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: RRAWGRTRRSRG*GRHRCRCAGQG
Trigger: ACCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 72 bp TGGCGGGATTGCGACTCTGGTTGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGGCGCGGTGGTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: WRDCDSGWWTAG*SGCPSGAVVPS
Trigger: ACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 72 bp TTGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCCTTCCGGCGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: LVVAGLRLWLVD*WVIWLPFRRGG
Trigger: ACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp TCGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTGGTaGAGGGCGTCATCGCTGTCGATGCGCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SEGMGSDQKKSW*RASSLSMRWAG
Trigger: CCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 90 bp CACCTCAGGGGTGATGGAGCCGCAGAGCTGACTGATGAGGGCGAGTaGGTGCTGCTCCGTGTTGCCCTGCATGATGGGGCTGCGGGTCCA +
Preference number: 6 (lower is better)
Translates to: HLRGDGAAELTDEGE*VLLRVALHDGAAGP
Trigger: TGGACCCGCAGCCCCATCATGCAGGGCAACACGGAGCAGCACCAACTCGCCCTCATCAGTCAGCTCTGCGGCTCCATCACCCCTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CAA 90 bp CGCTCAAACTCCGTCTGGTTGGTGGTGGCGGGATTGCGACTCTGGTaGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: RSNSVWLVVAGLRLW*VDCWVIWLPFRRGG
Trigger: ACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 90 bp GTGGCAAGCGCCGGCCCTCAGAAGACGCGCTCAAACTCCGTCTGGTaGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: VASAGPQKTRSNSVW*VVAGLRLWLVDCWV
Trigger: CACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGCCGGCGCTTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 72 bp CTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGTGGTaGCAAGTACTCGAACATGGACGTCAGGTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: LLGDLAALPARW*QVLEHGRQVGG
Trigger: TCCACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp AGGTCGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTaGTTGAGGGCGTCATCGCTGTCGATGCGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RSEGMGSDQKKS*LRASSLSMRWA
Trigger: TGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp GGACTGCTGGGTGATCTGGCTGCCCTTCCGGCGCGGTaGTGCCAAGTACTCGAACATGGACGTCAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: GLLGDLAALPAR*CQVLEHGRQVG
Trigger: ACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCCAGATCACCCAGCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp AGCGCCGGCCCTCAGAAGACGCGCTCAAACTCCGTCTaGTTGGTGGTGGCGGGATTGCGACTCTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SAGPQKTRSNSV*LVVAGLRLWLV
Trigger: CACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGCCGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp TCCGTCTGGTTGGTGGTGGCGGGATTGCGACTCTGGTaGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SVWLVVAGLRLW*VDCWVIWLPFR
Trigger: CCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp GCCGGCCCTCAGAAGACGCGCTCAAACTCCGTCTGGTaGGTGGTGGCGGGATTGCGACTCTGGTTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: AGPQKTRSNSVW*VVAGLRLWLVD
Trigger: GTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS TCA 72 bp TGCGCTGGGCAGGGTCCAGCACCAGCAGCTTGTCGATaGGGTCCAGTGCGTATGGGTCACGCACATAGGCCT +
Preference number: 6 (lower is better)
Translates to: CAGQGPAPAACR*GPVRMGHAHRP
Trigger: AGGCCTATGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCTGCCCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS GCA 72 bp ACTTCATCACAAAAAGGGCACTCCACCGAGTCGTACTaGTTTGCCATGGCCGCCTCCAACGCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: TSSQKGHSTESY*FAMAASNAPPP
Trigger: CGGCGGCGGCGCGTTGGAGGCGGCCATGGCAAAGCAGTACGACTCGGTGGAGTGCCCTTTTTGTGATGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000421939.5
ENST00000480353.5
CDS GCA 72 bp CTGATGAGGGCGAGTTGGTGCTGCTCCGTGTTGCCCTaGATGATGGGGCTGCGGGTCCACATCTCTGCCATG +
Preference number: 6 (lower is better)
Translates to: LMRASWCCSVLP*MMGLRVHISAM
Trigger: CATGGCAGAGATGTGGACCCGCAGCCCCATCATGCAGGGCAACACGGAGCAGCACCAACTCGCCCTCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CCA 72 bp AAGTCGTGGTTGAGGGCGTCATCGCTGTCGATGCGCTaGGCAGGGTCCAGCACCAGCAGCTTGTCGATGAGG +
Preference number: 6 (lower is better)
Translates to: KSWLRASSLSMR*AGSSTSSLSMR
Trigger: CCTCATCGACAAGCTGCTGGTGCTGGACCCTGCCCAGCGCATCGACAGCGATGACGCCCTCAACCACGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp CGCGGTGGTGCCAAGTACTCGAACATGGACGTCAGGTaGGTGGAGAGCATGCCCTTGAGGTCGGAGGGCATG +
Preference number: 6 (lower is better)
Translates to: RGGAKYSNMDVR*VESMPLRSEGM
Trigger: CATGCCCTCCGACCTCAAGGGCATGCTCTCCACCCACCTGACGTCCATGTTCGAGTACTTGGCACCACCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp CCGGCCCTCAGAAGACGCGCTCAAACTCCGTCTGGTTaGTGGTGGCGGGATTGCGACTCTGGTTGGTGGACT +
Preference number: 6 (lower is better)
Translates to: PALRRRAQTPSG*WWRDCDSGWWT
Trigger: AGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp GGTGATGGAGCCGCAGAGCTGACTGATGAGGGCGAGTaGGTGCTGCTCCGTGTTGCCCTGCATGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: GDGAAELTDEGE*VLLRVALHDGA
Trigger: AGCCCCATCATGCAGGGCAACACGGAGCAGCACCAACTCGCCCTCATCAGTCAGCTCTGCGGCTCCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CAA 72 bp CTGTCGATGCGCTGGGCAGGGTCCAGCACCAGCAGCTaGTCGATGAGGTCCAGTGCGTATGGGTCACGCACA +
Preference number: 6 (lower is better)
Translates to: LSMRWAGSSTSS*SMRSSAYGSRT
Trigger: TGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCTGCCCAGCGCATCGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CAA 90 bp CCTCAGAAGACGCGCTCAAACTCCGTCTGGTTGGTGGTGGCGGGATaGCGACTCTGGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PQKTRSNSVWLVVAG*RLWLVDCWVIWLPF
Trigger: GAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp AACTCCGTCTGGTTGGTGGTGGCGGGATTGCGACTCTaGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: NSVWLVVAGLRL*LVDCWVIWLPF
Trigger: GAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp CTCAGAAGACGCGCTCAAACTCCGTCTGGTTGGTGGTaGCGGGATTGCGACTCTGGTTGGTGGACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LRRRAQTPSGWW*RDCDSGWWTAG
Trigger: CCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CCA 72 bp GCCCTCAGAAGACGCGCTCAAACTCCGTCTGGTTGGTaGTGGCGGGATTGCGACTCTGGTTGGTGGACTGCT +
Preference number: 6 (lower is better)
Translates to: ALRRRAQTPSGW*WRDCDSGWWTA
Trigger: AGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGTCTTCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp TCGAACATGGACGTCAGGTGGGTGGAGAGCATGCCCTaGAGGTCGGAGGGCATGGGGTCGGACCAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: SNMDVRWVESMP*RSEGMGSDQKK
Trigger: CTTCTTCTGGTCCGACCCCATGCCCTCCGACCTCAAGGGCATGCTCTCCACCCACCTGACGTCCATGTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 72 bp ACGCGCTCAAACTCCGTCTGGTTGGTGGTGGCGGGATaGCGACTCTGGTTGGTGGACTGCTGGGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: TRSNSVWLVVAG*RLWLVDCWVIW
Trigger: CCAGATCACCCAGCAGTCCACCAACCAGAGTCGCAATCCCGCCACCACCAACCAGACGGAGTTTGAGCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS CAA 90 bp GCCAAGTACTCGAACATGGACGTCAGGTGGGTGGAGAGCATGCCCTaGAGGTCGGAGGGCATGGGGTCGGACCAGAAGAAGTCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: AKYSNMDVRWVESMP*RSEGMGSDQKKSWL
Trigger: CAACCACGACTTCTTCTGGTCCGACCCCATGCCCTCCGACCTCAAGGGCATGCTCTCCACCCACCTGACGTCCATGTTCGAGTACTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373264.5
CDS GCA 72 bp AGGGTCCAGCACCAGCAGCTTGTCGATGAGGTCCAGTaGGTATGGGTCACGCACATAGGCCTTCAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: RVQHQQLVDEVQ*VWVTHIGLQPV
Trigger: GACAGGCTGAAGGCCTATGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CCA 72 bp CAGCACCAGCAGCTTGTCGATGAGGTCCAGTGCGTATaGGTCACGCACATAGGCCTTCAGCCTGTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: QHQQLVDEVQCV*VTHIGLQPVLH
Trigger: GTGAAGGACAGGCTGAAGGCCTATGTGCGTGACCCATACGCACTGGACCTCATCGACAAGCTGCTGGTGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CAA 90 bp ACCTCCCCGAAGGTGCCTTGGCCGATCTTGGCGAGCTTCTCGTATTaGGAAACTTCATCACAAAAAGGGCACTCCACCGAGTCGTACTGC +
Preference number: 6 (lower is better)
Translates to: TSPKVPWPILASFSY*ETSSQKGHSTESYC
Trigger: GCAGTACGACTCGGTGGAGTGCCCTTTTTGTGATGAAGTTTCCAAATACGAGAAGCTCGCCAAGATCGGCCAAGGCACCTTCGGGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000421939.5
ENST00000480353.5
CDS TCA 72 bp CCTTCAGCCTGTCCTTCACCTTCCGCTTCTGGCCCTTaGCCAGCTCCAGCTTTTCGTACAGCTCATAGTTGT +
Preference number: 6 (lower is better)
Translates to: PSACPSPSASGP*PAPAFRTAHSC
Trigger: ACAACTATGAGCTGTACGAAAAGCTGGAGCTGGTCAAGGGCCAGAAGCGGAAGGTGAAGGACAGGCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373264.5
ENST00000498339.1
CDS CAA 72 bp GCCTTGAACACCTCCCCGAAGGTGCCTTGGCCGATCTaGGCGAGCTTCTCGTATTTGGAAACTTCATCACAA +
Preference number: 6 (lower is better)
Translates to: ALNTSPKVPWPI*ASFSYLETSSQ
Trigger: TTGTGATGAAGTTTCCAAATACGAGAAGCTCGCCAAGATCGGCCAAGGCACCTTCGGGGAGGTGTTCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000421939.5
ENST00000480353.5
CDS CAA 90 bp TGCATCACCCTCTTGATCTCAGACAGCGTGAACTTGACCAAAACATaGCTCAACAGCCCAGCAAGGTCATGCTCGCAGAAGTCGAACACC +
Preference number: 6 (lower is better)
Translates to: CITLLISDSVNLTKT*LNSPARSCSQKSNT
Trigger: GGTGTTCGACTTCTGCGAGCATGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGTCTGAGATCAAGAGGGTGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS CAA 72 bp AAGGTGCCTTGGCCGATCTTGGCGAGCTTCTCGTATTaGGAAACTTCATCACAAAAAGGGCACTCCACCGAG +
Preference number: 6 (lower is better)
Translates to: KVPWPILASFSY*ETSSQKGHSTE
Trigger: CTCGGTGGAGTGCCCTTTTTGTGATGAAGTTTCCAAATACGAGAAGCTCGCCAAGATCGGCCAAGGCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000421939.5
ENST00000480353.5
CDS CAA 90 bp TTAAGCAGCATCTGCATCACCCTCTTGATCTCAGACAGCGTGAACTaGACCAAAACATTGCTCAACAGCCCAGCAAGGTCATGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: LSSICITLLISDSVN*TKTLLNSPARSCSQ
Trigger: CTGCGAGCATGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGTCTGAGATCAAGAGGGTGATGCAGATGCTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS GCA 72 bp GCTCGCAGAAGTCGAACACCAGGTATATACTACCCTTaGAGCGGTTATAGGGGGAAGCTTTGGTTCGACAAA +
Preference number: 6 (lower is better)
Translates to: ARRSRTPGIYYP*SGYRGKLWFDK
Trigger: TTTGTCGAACCAAAGCTTCCCCCTATAACCGCTGCAAGGGTAGTATATACCTGGTGTTCGACTTCTGCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS CAA 72 bp CTCTTGATCTCAGACAGCGTGAACTTGACCAAAACATaGCTCAACAGCCCAGCAAGGTCATGCTCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: LLISDSVNLTKT*LNSPARSCSQK
Trigger: CTTCTGCGAGCATGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGTCTGAGATCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS GCA 72 bp TTGACCAAAACATTGCTCAACAGCCCAGCAAGGTCATaGTCGCAGAAGTCGAACACCAGGTATATACTACCC +
Preference number: 6 (lower is better)
Translates to: LTKTLLNSPARS*SQKSNTRYILP
Trigger: GGGTAGTATATACCTGGTGTTCGACTTCTGCGAGCATGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS CAA 72 bp ATCTGCATCACCCTCTTGATCTCAGACAGCGTGAACTaGACCAAAACATTGCTCAACAGCCCAGCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: ICITLLISDSVN*TKTLLNSPARS
Trigger: TGACCTTGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGTCTGAGATCAAGAGGGTGATGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1
CDS TCA 72 bp TCAATCAAGTTGACCACATTCTCGTGTTTTAGAAGCTaGAGGATCTTGATCTCCCGCAAGGCTGTAATGGGG +
Preference number: 6 (lower is better)
Translates to: SIKLTTFSCFRS*RILISRKAVMG
Trigger: CCCCATTACAGCCTTGCGGGAGATCAAGATCCTTCAGCTTCTAAAACACGAGAATGTGGTCAACTTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373264.5
ENST00000480353.5
ENST00000491521.1