RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK6 (Homo sapiens)

Ensembl gene IDs: ENSG00000105810

Ensembl transcript IDs: ENST00000265734.8, ENST00000424848.3, ENST00000467166.1, ENST00000473078.1, ENST00000491250.1

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGTGGTGGCCAGGCCTAGACAGGCACACCTGTGGTCCATGATGTaGAGGAAGATGGAGAGCACCATGTGGACAAGCCAGGATGGTAGC +
Preference number: 1 (lower is better)
Translates to: GVVARPRQAHLWSMM*RKMESTMWTSQDGS
Trigger: GCTACCATCCTGGCTTGTCCACATGGTGCTCTCCATCTTCCTCCACATCATGGACCACAGGTGTGCCTGTCTAGGCCTGGCCACCACTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp ATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTCATaGGGGCAGACAAGAGGAGGCACCACCCAGGCACTGGTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: MTPTRALHHVREASS*GQTRGGTTQALVSA
Trigger: GGCAGAGACCAGTGCCTGGGTGGTGCCTCCTCTTGTCTGCCCTCATGAAGAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp CTGTTTACAATGCCCAGGCCAGGCTGGCTCTGTAGAGAGCAGGAGTaGGCACAAGGCACTAGAAATAAGCACAGCCTGGGGGATGGAGAA +
Preference number: 1 (lower is better)
Translates to: LFTMPRPGWLCREQE*AQGTRNKHSLGDGE
Trigger: TTCTCCATCCCCCAGGCTGTGCTTATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTACAGAGCCAGCCTGGCCTGGGCATTGTAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp GTAGGAAGGTTCTTGCTTTCAGAGAGCTGTGCTGCACCCACAGGGTaGACCCGACAGGCCACTGTGGTAACTCTCAATCTGTGTACAGAG +
Preference number: 1 (lower is better)
Translates to: VGRFLLSESCAAPTG*TRQATVVTLNLCTE
Trigger: CTCTGTACACAGATTGAGAGTTACCACAGTGGCCTGTCGGGTCCACCCTGTGGGTGCAGCACAGCTCTCTGAAAGCAAGAACCTTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp TGCTTGCCACTCAGGAGGAAAGTTGGGCAGGCACCGTCGAGTGTCTaGCACTCAAAAGGAATAAGCTGCTTTCTGTGGTGCTGTGCTAAG +
Preference number: 1 (lower is better)
Translates to: CLPLRRKVGQAPSSV*HSKGISCFLWCCAK
Trigger: CTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGTGGCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp TTAGCGCCTGAGAGATGCGGGGTAGACAGCTTCACACAGGGCAGCTaGTACCGCATCTCTTTTTACCCGAACTTTCGGAGAATTGTGTTG +
Preference number: 1 (lower is better)
Translates to: LAPERCGVDSFTQGS*YRISFYPNFRRIVL
Trigger: CAACACAATTCTCCGAAAGTTCGGGTAAAAAGAGATGCGGTAGCAGCTGCCCTGTGTGAAGCTGTCTACCCCGCATCTCTCAGGCGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp AACGTTAGAATAGGTAGGAAGGTTCTTGCTTTCAGAGAGCTGTGCTaGACCCACAGGGTGGACCCGACAGGCCACTGTGGTAACTCTCAA +
Preference number: 1 (lower is better)
Translates to: NVRIGRKVLAFRELC*THRVDPTGHCGNSQ
Trigger: TTGAGAGTTACCACAGTGGCCTGTCGGGTCCACCCTGTGGGTGCAGCACAGCTCTCTGAAAGCAAGAACCTTCCTACCTATTCTAACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp GCACACCTGTGGTCCATGATGTGGAGGAAGATGGAGAGCACCATGTaGACAAGCCAGGATGGTAGCAGGGAACACTTTAGTGGTAGAAAG +
Preference number: 1 (lower is better)
Translates to: AHLWSMMWRKMESTM*TSQDGSREHFSGRK
Trigger: CTTTCTACCACTAAAGTGTTCCCTGCTACCATCCTGGCTTGTCCACATGGTGCTCTCCATCTTCCTCCACATCATGGACCACAGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp AACGAGGCAGCGCGCCCGGAAGGCTTTCAAGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTTCAGACTGGCCACTGTTATAACAAA +
Preference number: 1 (lower is better)
Translates to: NEAARPEGFQVGIKF*ARANGVQTGHCYNK
Trigger: TTTGTTATAACAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAAAACTTGATTCCCACTTGAAAGCCTTCCGGGCGCGCTGCCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp CTGAAATGGCCCCAAGCTTTCTTCCAAAACAGGTTCTTTGCACCTTaGGTTCCCATCCACTTCAAAGGAGGGACAAAGTGGGAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: LKWPQAFFQNRFFAP*VPIHFKGGTKWEAP
Trigger: TGGAGCCTCCCACTTTGTCCCTCCTTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGGAAGAAAGCTTGGGGCCATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp ACACAGCTAAGTTGCCTGAAGCATGGAAACTTGGACTTCTCCATCTaGCACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTT +
Preference number: 1 (lower is better)
Translates to: TQLSCLKHGNLDFSI*HVLEASRHKLTVLL
Trigger: AAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAAGTTTCCATGCTTCAGGCAACTTAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp TGCTTCTACAGAAAAACTCTCACACTGCTCTCCTCTCAACAGTACTaGCTGTTCCCACTACTCCACATGACACCTACGAGGGCACTACAT +
Preference number: 1 (lower is better)
Translates to: CFYRKTLTLLSSQQY*LFPLLHMTPTRALH
Trigger: ATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGGAACAGGCAGTACTGTTGAGAGGAGAGCAGTGTGAGAGTTTTTCTGTAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp GTAGGTTGTTTTGACTCCACCCTGTGCAACAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACATCAAACAGAAACTAGCAGGGACATT +
Preference number: 1 (lower is better)
Translates to: VGCFDSTLCNSSQNA*AARTKHQTETSRDI
Trigger: AATGTCCCTGCTAGTTTCTGTTTGATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAAACAACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp TACCACACTGGATTGCTTCTGTACACAGCTAAGTTGCCTGAAGCATaGAAACTTGGACTTCTCCATCTGACACGTTCTGGAAGCCTCAAG +
Preference number: 1 (lower is better)
Translates to: YHTGLLLYTAKLPEA*KLGLLHLTRSGSLK
Trigger: CTTGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAAGTTTCCATGCTTCAGGCAACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp GTAGAGAGCAGGAGTGAGCACAAGGCACTAGAAATAAGCACAGCCTaGGGGATGGAGAAAAGATCATTTGATAGAGTAAATGTATGGCCC +
Preference number: 1 (lower is better)
Translates to: VESRSEHKALEISTA*GMEKRSFDRVNVWP
Trigger: GGGCCATACATTTACTCTATCAAATGATCTTTTCTCCATCCCCCAGGCTGTGCTTATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp GCACCGTCGAGTGTCTGCCACTCAAAAGGAATAAGCTGCTTTCTGTaGTGCTGTGCTAAGGAAACTGAAAAATACTGCAATATCCTTCCC +
Preference number: 1 (lower is better)
Translates to: APSSVCHSKGISCFL*CCAKETEKYCNILP
Trigger: GGGAAGGATATTGCAGTATTTTTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp CCGTCGAGTGTCTGCCACTCAAAAGGAATAAGCTGCTTTCTGTGGTaGTGTGCTAAGGAAACTGAAAAATACTGCAATATCCTTCCCTAC +
Preference number: 1 (lower is better)
Translates to: PSSVCHSKGISCFLW*CAKETEKYCNILPY
Trigger: GTAGGGAAGGATATTGCAGTATTTTTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACTCGACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp AAAAATCAAGATGCATACAAAGATGCTAGAGGCATTTCTAATGGGTaGCATGAGCACAGTCTGTGCCCAGCATCAGGAACCATCTCTAGA +
Preference number: 1 (lower is better)
Translates to: KNQDAYKDARGISNG*HEHSLCPASGTISR
Trigger: TCTAGAGATGGTTCCTGATGCTGGGCACAGACTGTGCTCATGGCACCCATTAGAAATGCCTCTAGCATCTTTGTATGCATCTTGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp AGATTACATCATAACTCAGCTGTGCCTGGATTACCCACTCCACACTaGCAGCATTCAAGGTTAGAAAAATCAAATGGCAGCACAATTGGT +
Preference number: 1 (lower is better)
Translates to: RLHHNSAVPGLPTPH*QHSRLEKSNGSTIG
Trigger: ACCAATTGTGCTGCCATTTGATTTTTCTAACCTTGAATGCTGCCAGTGTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGATGTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp CCTCGATCAAAGGAAAGGCAGAACTCACTTTTCCATGTGAGACTTTaGGTAGACCTGACCTTGAATGCTGTGGATTCATTATATCTCAAG +
Preference number: 1 (lower is better)
Translates to: PRSKERQNSLFHVRL*VDLTLNAVDSLYLK
Trigger: CTTGAGATATAATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAAAGTGAGTTCTGCCTTTCCTTTGATCGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp ATTACCCACTCCACACTGGCAGCATTCAAGGTTAGAAAAATCAAATaGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTGGAATTTTTC +
Preference number: 1 (lower is better)
Translates to: ITHSTLAAFKVRKIK*QHNWSAASLLLEFF
Trigger: GAAAAATTCCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTGATTTTTCTAACCTTGAATGCTGCCAGTGTGGAGTGGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 90 bp GTGGCTCTTGTTTTCTTCCTAAGGCTAGACAAGGTAACAATATGTTaGAGGAAGTCCACTTCTACTCATTTAGCTAAACGTTATCACTTC +
Preference number: 1 (lower is better)
Translates to: VALVFFLRLDKVTIC*RKSTSTHLAKRYHF
Trigger: GAAGTGATAACGTTTAGCTAAATGAGTAGAAGTGGACTTCCTTCAACATATTGTTACCTTGTCTAGCCTTAGGAAGAAAACAAGAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp TCTCTTTTTACCCGAACTTTCGGAGAATTGTGTTGTACTTATTTATaGACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTA +
Preference number: 1 (lower is better)
Translates to: SLFTRTFGELCCTYL*TEDTRLLLGTFFFL
Trigger: TAGGAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACAACACAATTCTCCGAAAGTTCGGGTAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp AATAAATTATACAGGCAATCCTTGCTTTTTATTACCACACTGGATTaGTTCTGTACACAGCTAAGTTGCCTGAAGCATGGAAACTTGGAC +
Preference number: 1 (lower is better)
Translates to: NKLYRQSLLFITTLD*FCTQLSCLKHGNLD
Trigger: GTCCAAGTTTCCATGCTTCAGGCAACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATAATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 90 bp GAACTCACTTTTCCATGTGAGACTTTGAGTAGACCTGACCTTGAATaGTGTGGATTCATTATATCTCAAGCATTTATAGTACTGACAACA +
Preference number: 1 (lower is better)
Translates to: ELTFPCETLSRPDLE*CGFIISQAFIVLTT
Trigger: TGTTGTCAGTACTATAAATGCTTGAGATATAATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAAAGTGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp GAAAAATCAAATGGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTaGAATTTTTCCAGGTTCTTGAAACAAACAGACAAACAAACAAAC +
Preference number: 1 (lower is better)
Translates to: EKSNGSTIGQQLLFF*NFSRFLKQTDKQTN
Trigger: GTTTGTTTGTTTGTCTGTTTGTTTCAAGAACCTGGAAAAATTCCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTGATTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 90 bp CGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATaGGAACAGCTTAAGCAATCTGTTATTAGTTATACAATGGTAGCA +
Preference number: 1 (lower is better)
Translates to: RIYERFIESKQTGGA*EQLKQSVISYTMVA
Trigger: TGCTACCATTGTATAACTAATAACAGATTGCTTAAGCTGTTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCACTCAGGAGGAAAGTTaGGCAGGCACCGTCGAGTGT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGTQEES*AGTVEC
Trigger: ACACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACAT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGSSQNA*AARTKH
Trigger: ATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGAGCAGAGGGGCGAATaGGGCGGGGGATTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFEQRGE*GGGFLS
Trigger: GCTGAGAAATCCCCCGCCTCATTCGCCCCTCTGCTC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTGTAGAGAGCAGGAGTaGGCACAAGGCACTAGAAAT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGCREQE*AQGTRN
Trigger: ATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTACA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAAAGTTCAGAGAGGCTaGGATGCCCTTTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGKVQRG*DALSFC
Trigger: ACAGAATGAAAGGGCATCTCAGCCTCTCTGAACTTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGGTTCTTTGCACCTTaGGTTCCCATCCACTTCAAA +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGRFFAP*VPIHFK
Trigger: TTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCACAAGATGGATACTTTaGCAACAAGGCAGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGTRWIL*QQGSVW
Trigger: CCACACACTGCCTTGTTGGCAAAGTATCCATCTTGT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTACTGAGACTCATCTaGTTGCCACTCAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGLLRLI*LPLRRK
Trigger: TTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAGTAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCAACAAGGCAGTGTGTaGCAGAAAGTACAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGQQGSV*QKVQCN
Trigger: ATTACACTGTACTTTCTGCCACACACTGCCTTGTTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAATCTAACTGTTGCATaGTCTAACTGTTGCATGCAC +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGNLTVA*SNCCMH
Trigger: GTGCATGCAACAGTTAGATCATGCAACAGTTAGATT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAATGCCCAGGCCAGGCTaGCTCTGTAGAGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTMPRPG*LCREQE
Trigger: CTCCTGCTCTCTACAGAGCCAGCCTGGCCTGGGCAT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTGCTTGTGTTGGATCTaGATTTCAGAAATGGCGAAT +
Preference number: 2 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGCLCWI*ISEMAN
Trigger: ATTCGCCATTTCTGAAATCCAGATCCAACACAAGCA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCATAGGGGCTTTAACTaGACTCTAGTTCCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFHRGFN*TLVPGS
Trigger: GCTCCCAGGAACTAGAGTCCAGTTAAAGCCCCTATG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFVGIKF*ARANGV
Trigger: AACCCCATTTGCTCGTGCTCAAAACTTGATTCCCAC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAGCAGCAGGGCACTCTaGCCTCGGAAAGCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSSSRAL*PRKAAR
Trigger: GCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGCTGCT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAAAGGAGGGACAAAGTaGGAGGCTCCAACCCACTGG +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTKGGTK*EAPTHW
Trigger: CCAGTGGGTTGGAGCCTCCCACTTTGTCCCTCCTTT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp GCTGAAATGGCCCCAAGCTTTCTTCCAAAACAGGTTCTTTGCACCTaGAGTTCCCATCCACTTCAAAGGAGGGACAAAGTGGGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: AEMAPSFLPKQVLCT*SSHPLQRRDKVGGS
Trigger: GGAGCCTCCCACTTTGTCCCTCCTTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGGAAGAAAGCTTGGGGCCATTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAGGTTCTTTGCACCTTaGGTTCCCATCCACTTCAAA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFRFFAP*VPIHFK
Trigger: TTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGAGAATACAGGGGGCTaGAATGGCCCCAAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTENTGG*NGPKLS
Trigger: AGAAAGCTTGGGGCCATTTCAGCCCCCTGTATTCTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGGGCACTACATCACGTaGGGGAAGCTTCTTCATGAG +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTGHYIT*GKLLHE
Trigger: CTCATGAAGAAGCTTCCCTCACGTGATGTAGTGCCC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCACAAGATGGATACTTTaGCAACAAGGCAGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFTRWIL*QQGSVW
Trigger: CCACACACTGCCTTGTTGGCAAAGTATCCATCTTGT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTCAGAGAGGCTGAGATaGCCTTTCATTCTGTGTCAT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFSERLR*PFILCH
Trigger: ATGACACAGAATGAAAGGGCATCTCAGCCTCTCTGA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTACCCACTCCACACTaGCAGCATTCAAGGTTAGAA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFLPTPH*QHSRLE
Trigger: TTCTAACCTTGAATGCTGCCAGTGTGGAGTGGGTAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAAACAGGTGGTGCATaGGAACAGCTTAAGCAATCT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQTGGA*EQLKQS
Trigger: AGATTGCTTAAGCTGTTCCCATGCACCACCTGTTTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCGGAAGGCTTTCAAGTaGGAATCAAGTTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFRKAFK*ESSFEH
Trigger: GTGCTCAAAACTTGATTCCCACTTGAAAGCCTTCCG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTCTCAGCCAGTTTCTaGCTGCCCCTAGTGTATGTG +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTFSASF*LPLVYV
Trigger: CACATACACTAGGGGCAGTCAGAAACTGGCTGAGAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACAACAGTTCCCAAAATaGCTGAGCCGCCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTQQFPK*LSRQNQ
Trigger: TTGGTTCTGGCGGCTCAGGCATTTTGGGAACTGTTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAACAAGGCAGTGTGTaGCAGAAAGTACAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQQGSV*QKVQCN
Trigger: ATTACACTGTACTTTCTGCCACACACTGCCTTGTTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCACCGATGGAAGAACTaGGGACAGATTTTTACAAAG +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFHRWKN*GQIFTK
Trigger: CTTTGTAAAAATCTGTCCCCAGTTCTTCCATCGGTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAGGACTTACATTTCTTaGCACACTTTGGTAGCCTCA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFRTYIS*HTLVAS
Trigger: TGAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACATAGGGGCTTTAACTaGACTCTAGTTCCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTHRGFN*TLVPGS
Trigger: GCTCCCAGGAACTAGAGTCCAGTTAAAGCCCCTATG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGTAGAGAGCAGGAGTaGGCACAAGGCACTAGAAAT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTCREQE*AQGTRN
Trigger: ATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTACA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCACAGTGTGTGCTTCCTaGGAGAAAATCATGAGAATA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFTVCAS*EKIMRI
Trigger: TATTCTCATGATTTTCTCTCAGGAAGCACACACTGT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCATCAGAAGATAATCTaGCAACGATTGAATGCCAGA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFHQKII*QRLNAR
Trigger: TCTGGCATTCAATCGTTGGCAGATTATCTTCTGATG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAGTATTTCAGCAGATaGTCGAAAAGAGCCTGTATT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQYFSR*SKRACI
Trigger: AATACAGGCTCTTTTCGAGCATCTGCTGAAATACTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTTCTTCCTAAGATTTaGAGAACAGATGCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFFLPKI*RTDASE
Trigger: CTCAGAGGCATCTGTTCTGCAAATCTTAGGAAGAAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAAGACTGCTTGTGTTaGATCTGGATTTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQDCLC*IWISEM
Trigger: CATTTCTGAAATCCAGATCCAACACAAGCAGTCTTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCCACTGCTTAGCTTTTaGCAAAGATGTTTGAAACCA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFPLLSF*QRCLKP
Trigger: TGGTTTCAAACATCTTTGCCAAAAGCTAAGCAGTGG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAAGTATTGCTTCATGTaGTTGCCTCTTCCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFKYCFM*LPLPLK
Trigger: TTTCAAGGGAAGAGGCAACCACATGAAGCAATACTT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCCATGGGATTTCTTATaGAAGCTAAATGGACAAGTT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFPWDFL*KLNGQV
Trigger: AACTTGTCCATTTAGCTTTCATAAGAAATCCCATGG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAATATATTTCAGAAGTaGCGGGAGATAGACAAGATG +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFNIFQK*REIDKM
Trigger: CATCTTGTCTATCTCCCGGCACTTCTGAAATATATT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACTATCTGCTTCAAAATaGCCTAACGGCAAGACTGCT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTLSASK*PNGKTA
Trigger: AGCAGTCTTGCCGTTAGGGCATTTTGAAGCAGATAG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTTTCAGTTCACCACTaGTTAGCTTTTGGCAAAGAT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFFSVHH*LAFGKD
Trigger: ATCTTTGCCAAAAGCTAAGCAGTGGTGAACTGAAAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAACCTTGGGGCAATATaGCCTTTTCAGTTCACCACT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTNLGAI*PFQFTT
Trigger: AGTGGTGAACTGAAAAGGGCATATTGCCCCAAGGTT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGTTAGAAAAATCAAATaGCAGCACAATTGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFVRKIK*QHNWSA
Trigger: TGCTGACCAATTGTGCTGCCATTTGATTTTTCTAAC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGCACAGCCTGGGGGATaGAGAAAAGATCATTTGATA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTAQPGG*RKDHLI
Trigger: TATCAAATGATCTTTTCTCCATCCCCCAGGCTGTGC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACTTTCTGTGTCCTCTaGTTACTAGAGCCAACTGAG +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTFCVL*LLEPTE
Trigger: CTCAGTTGGCTCTAGTAACCAGAGGACACAGAAAGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGGGACATTCTTGTACTaGTCCTACTATGAAATTCAA +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFGTFLY*SYYEIQ
Trigger: TTGAATTTCATAGTAGGACCAGTACAAGAATGTCCC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAAAGGAGGGACAAAGTaGGAGGCTCCAACCCACTGG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSKGGTK*EAPTHW
Trigger: CCAGTGGGTTGGAGCCTCCCACTTTGTCCCTCCTTT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp GGATTTCTCAGCCAGTTTCTGACTGCCCCTAGTGTATGTGGCATTTaGGTTCAGTATGAATTACTGAGACTCATCTGCTTGCCACTCAGG +
Preference number: 2 (lower is better)
Translates to: GFLSQFLTAPSVCGI*VQYELLRLICLPLR
Trigger: CCTGAGTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAACCAAAATGCCACATACACTAGGGGCAGTCAGAAACTGGCTGAGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTCAGTATGAATTACTaGGACTCATCTGCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTFSMNY*DSSACH
Trigger: GTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCACAATATTTTAACTTaGTATGAGCTGCTTCAGTGT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFHNILT*YELLQC
Trigger: ACACTGAAGCAGCTCATAGCAAGTTAAAATATTGTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGCCATTCACAGTGTGTaGTTCCTGAGAGAAAATCAT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTAIHSV*FLRENH
Trigger: ATGATTTTCTCTCAGGAAGCACACACTGTGAATGGC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTACTAGGCGGTTTCCTTaGAGAAGCAGAGCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSTRRFP*RSRACP
Trigger: TGGACAGGCTCTGCTTCTCCAAGGAAACCGCCTAGT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAGGACTTACATTTCTTaGCACACTTTGGTAGCCTCA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTRTYIS*HTLVAS
Trigger: TGAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAATTACCTGGTCTTTTaGTATTTTAGGGCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFNYLVF*YFRALF
Trigger: AAACAGAGCCCTAAAATACCAAAAGACCAGGTAATT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTGAGCACGAGCAAATaGGGTTCAGACTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSLSTSK*GSDWPL
Trigger: CAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGTACAGTGTAATAGATaGGGAAAATTTCAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTVQCNR*GKFQGH
Trigger: GTGGCCTTGAAATTTTCCTCATCTATTACACTGTAC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACAT +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSSSQNA*AARTKH
Trigger: ATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAATCATAACTCAGCTGTaGCTGGATTACCCACTCCAC +
Preference number: 2 (lower is better)
Translates to: TPGRRTALENICDPVRFAIITQL*LDYPLH
Trigger: GTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGAT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAAAAGCTGTTTACAATaGCCAGGCCAGGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSKSCLQ*PGQAGS
Trigger: AGAGCCAGCCTGGCCTGGGCATTGTAAACAGCTTTT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACTGCCAACGATTGAATaGCAGAATGTTTGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTLPTIE*QNVCAL
Trigger: TAAAGCACAAACATTCTGGCATTCAATCGTTGGCAG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGAGTATTCACTCAAATaGAACAACTACACCGATGGA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTEYSLK*NNYTDG
Trigger: TCCATCGGTGTAGTTGTTGCATTTGAGTGAATACTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCACTGCTTAGCTTTTaGCAAAGATGTTTGAAACCA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPLLSF*QRCLKP
Trigger: TGGTTTCAAACATCTTTGCCAAAAGCTAAGCAGTGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACTCAGGAGGAAAGTTaGGCAGGCACCGTCGAGTGT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTQEES*AGTVEC
Trigger: ACACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp AGCTGCTACCGCATCTCTTTTTACCCGAACTTTCGGAGAATTGTGTaGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGAC +
Preference number: 2 (lower is better)
Translates to: SCYRISFYPNFRRIV*YLFMHRRHPFATRD
Trigger: GTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACAACACAATTCTCCGAAAGTTCGGGTAAAAAGAGATGCGGTAGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAGAAGACTATTTTGGTaGATCACCTTCAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTRRLFW*ITFSEQ
Trigger: TTGTTCACTGAAGGTGATTCACCAAAATAGTCTTCT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCATGGGATTTCTTATaGAAGCTAAATGGACAAGTT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPWDFL*KLNGQV
Trigger: AACTTGTCCATTTAGCTTTCATAAGAAATCCCATGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGTCTACTGAATTACTaGTGTGCTACTCATTTTGCT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTCLLNY*CATHFA
Trigger: AGCAAAATGAGTAGCACATCAGTAATTCAGTAGACA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSVGIKF*ARANGV
Trigger: AACCCCATTTGCTCGTGCTCAAAACTTGATTCCCAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACTTTAAGATCAAACTaGGAGTTGTTGGTGATCACA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTLRSN*ELLVIT
Trigger: TGTGATCACCAACAACTCTCAGTTTGATCTTAAAGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTATCATAACTCAGCTGTaGCTGGATTACCCACTCCAC +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSIITQL*LDYPLH
Trigger: GTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGAT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTTGACTCCACCCTGTaGAACAGTTCCCAAAATGCC +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSFDSTL*NSSQNA
Trigger: GGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACTAGGCGGTTTCCTTaGAGAAGCAGAGCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTRRFP*RSRACP
Trigger: TGGACAGGCTCTGCTTCTCCAAGGAAACCGCCTAGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGCATGCAGCTTATTTaGGGGCTTAGTCTAATTTTT +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTCMQLI*GLSLIF
Trigger: AAAAATTAGACTAAGCCCCCAAATAAGCTGCATGCA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACCAGAAAAGAAATGCTaGGGACATGGGGTTAACTTT +
Preference number: 2 (lower is better)
Translates to: TPGRRTALENICDPVRFAPEKKC*GHGVNF
Trigger: AAAGTTAACCCCATGTCCTCAGCATTTCTTTTCTGG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAAAGTTCAGAGAGGCTaGGATGCCCTTTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSKVQRG*DALSFC
Trigger: ACAGAATGAAAGGGCATCTCAGCCTCTCTGAACTTT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGCTCAGATGAATCAGTaGAGTGAGTTTTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: HLTRSGSLKAQADSSASTAQMNQ*SEFLNS
Trigger: TGAATTTAAAAACTCACTGCACTGATTCATCTGAGC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAACAGTTCCCAAAATaGCTGAGCCGCCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQQFPK*LSRQNQ
Trigger: TTGGTTCTGGCGGCTCAGGCATTTTGGGAACTGTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGCACCGTCGAGTGTCTaGCACTCAAAAGGAATAAGC +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFAPSSV*HSKGIS
Trigger: GCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTACTGAGACTCATCTaGTTGCCACTCAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSLLRLI*LPLRRK
Trigger: TTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAGTAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TPGRRTALENICDPVRFAKWQHN*SAASLL
Trigger: AAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp CCCTCGATCAAAGGAAAGGCAGAACTCACTTTTCCATGTGAGACTTaGAGTAGACCTGACCTTGAATGCTGTGGATTCATTATATCTCAA +
Preference number: 2 (lower is better)
Translates to: PSIKGKAELTFPCET*SRPDLECCGFIISQ
Trigger: TTGAGATATAATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAAAGTGAGTTCTGCCTTTCCTTTGATCGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACCAGAAAAGAAATGCTaGGGACATGGGGTTAACTTT +
Preference number: 2 (lower is better)
Translates to: LRIYERFIESKQTGGAWEPEKKC*GHGVNF
Trigger: AAAGTTAACCCCATGTCCTCAGCATTTCTTTTCTGG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTCAGTATGAATTACTaGGACTCATCTGCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSFSMNY*DSSACH
Trigger: GTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp CTCTACTATCTGCTTCAAAATGCCCTAACGGCAAGACTGCTTGTGTaGGATCTGGATTTCAGAAATGGCGAATCTGGACATAAAATACAT +
Preference number: 2 (lower is better)
Translates to: LYYLLQNALTARLLV*DLDFRNGESGHKIH
Trigger: ATGTATTTTATGTCCAGATTCGCCATTTCTGAAATCCAGATCCAACACAAGCAGTCTTGCCGTTAGGGCATTTTGAAGCAGATAGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp GAAGACAGTAGCCTTAGAGATAAGCTTTCTTTCTTTCTTCTTCTTTaGCTTCAAGAGGGCTTTCTGTGTGTAATGGAGGGATGGTTGCTA +
Preference number: 2 (lower is better)
Translates to: EDSSLRDKLSFFLLL*LQEGFLCVMEGWLL
Trigger: TAGCAACCATCCCTCCATTACACACAGAAAGCCCTCTTGAAGCAAAAGAAGAAGAAAGAAAGAAAGCTTATCTCTAAGGCTACTGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTATCTGCTTCAAAATaGCCTAACGGCAAGACTGCT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLSASK*PNGKTA
Trigger: AGCAGTCTTGCCGTTAGGGCATTTTGAAGCAGATAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGCTGCTTTCTGTGGTaGTGTGCTAAGGAAACTGAA +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFSCFLW*CAKETE
Trigger: TTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAACAACTACACCGATaGAAGAACTGGGGACAGATT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQQLHR*KNWGQI
Trigger: AATCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGTTATAACAAACCCTaGGGTGGAATTCGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFCYNKP*GGIRPF
Trigger: GAAAGGCCGAATTCCACCCCAGGGTTTGTTATAACA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAAGGCAGAGATGGTATaGAATATAAAGGACTGTAGA +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSKAEMV*NIKDCR
Trigger: TCTACAGTCCTTTATATTTCATACCATCTCTGCCTT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTCCATGTGAGACTTTaGGTAGACCTGACCTTGAAT +
Preference number: 2 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFHVRL*VDLTLN
Trigger: ATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAATGTCTTTGTATTTTaGCCCTCGATCAAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSNVFVF*PSIKGK
Trigger: CTTTCCTTTGATCGAGGGTCAAAATACAAAGACATT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAAGGTAACAATATGTTaGAGGAAGTCCACTTCTACT +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSKVTIC*RKSTST
Trigger: AGTAGAAGTGGACTTCCTTCAACATATTGTTACCTT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGAATTATTTTCTGAGTaGAGCAACCTCCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSELFSE*SNLHSL
Trigger: CAAAGAATGGAGGTTGCTGCACTCAGAAAATAATTC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTGTTGTACTTATTTATaGACAGAAGACACCCGTTTG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSCCTYL*TEDTRL
Trigger: CAAACGGGTGTCTTCTGTGCATAAATAAGTACAACA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFKWQHN*SAASLL
Trigger: AAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGGACATTCTTGTACTaGTCCTACTATGAAATTCAA +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSGTFLY*SYYEIQ
Trigger: TTGAATTTCATAGTAGGACCAGTACAAGAATGTCCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTTTTCTCATCAAGATaGATAGTACATTCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: NCVALCVLISATVIVLGSVFSSR*IVHSGE
Trigger: CTCTCCAGAATGTACTATCCATCTTGATGAGAAAAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCATAAGCTGCTTTCTGTaGTGCTGTGCTAAGGAAACT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFISCFL*CCAKET
Trigger: AGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTAT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATCTAACTGTTGCATaGTCTAACTGTTGCATGCAC +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNLTVA*SNCCMH
Trigger: GTGCATGCAACAGTTAGATCATGCAACAGTTAGATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAAATTTAATCAATGTTaGAAGGCCACCATGCTAGGG +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFKFNQC*KATMLG
Trigger: CCCTAGCATGGTGGCCTTTCAACATTGATTAAATTT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGTCAGAAAGCACAGGTaGCTAAACTTTCCAAAAGAT +
Preference number: 2 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEVRKHR*LNFPKD
Trigger: ATCTTTTGGAAAGTTTAGCCACCTGTGCTTTCTGAC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp ACAGCATTTCTAATTACTCTAAGGACTTACATTTCTTGGCACACTTaGGTAGCCTCAATAAGTTTTTCCACTGTGGAGATGGAACATGTA +
Preference number: 2 (lower is better)
Translates to: TAFLITLRTYISWHT*VASISFSTVEMEHV
Trigger: TACATGTTCCATCTCCACAGTGGAAAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTTAGAGTAATTAGAAATGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGAAGACTATTTTGGTaGATCACCTTCAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVERRLFW*ITFSEQ
Trigger: TTGTTCACTGAAGGTGATTCACCAAAATAGTCTTCT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCATTTTGGTTCAGTATaGATTACTGAGACTCATCTG +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFHFGSV*ITETHL
Trigger: CAGATGAGTCTCAGTAATTCATACTGAACCAAAATG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGAATTATTTTCTGAGTaGAGCAACCTCCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEELFSE*SNLHSL
Trigger: CAAAGAATGGAGGTTGCTGCACTCAGAAAATAATTC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGACCTGACCTTGAATaGTGTGGATTCATTATATCT +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRPDLE*CGFIIS
Trigger: AGATATAATGAATCCACAGCATTCAAGGTCAGGTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 90 bp TTTGAGGAAAACAGCATTTCTAATTACTCTAAGGACTTACATTTCTaGGCACACTTTGGTAGCCTCAATAAGTTTTTCCACTGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: FEENSISNYSKDLHF*AHFGSLNKFFHCGD
Trigger: ATCTCCACAGTGGAAAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTTAGAGTAATTAGAAATGCTGTTTTCCTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATTGGGTTGTGAATTaGATTGATATAGAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNWVVN*IDIERE
Trigger: CTCCCTTTCTATATCAATGCAATTCACAACCCAATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATGGACATGATAAATaGTTTTGGGTAAGGTTCACA +
Preference number: 2 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNGHDK*FWVRFT
Trigger: TGTGAACCTTACCCAAAACCATTTATCATGTCCATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp TTGGGAGTGGTGGCCAGGCCTAGACAGGCACACCTGTaGTCCATGATGTGGAGGAAGATGGAGAGCACCATG +
Preference number: 3 (lower is better)
Translates to: LGVVARPRQAHL*SMMWRKMESTM
Trigger: CATGGTGCTCTCCATCTTCCTCCACATCATGGACCACAGGTGTGCCTGTCTAGGCCTGGCCACCACTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp GCGCGCCCGGAAGGCTTTCAAGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTTCAGACTGGCCACTGT +
Preference number: 3 (lower is better)
Translates to: ARPEGFQVGIKF*ARANGVQTGHC
Trigger: ACAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAAAACTTGATTCCCACTTGAAAGCCTTCCGGGCGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCAAGGTAACAATATGTaGAAGGAAGTCCACTTCTAC +
Preference number: 3 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGQGNNM*KEVHFY
Trigger: GTAGAAGTGGACTTCCTTCAACATATTGTTACCTTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACACTCAGGAGGAAAGTaGGGCAGGCACCGTCGAGTG +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTHSGGK*GRHRRV
Trigger: CACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp CACAGTCTGTGCCCAGCATCAGGAACCATCTCTAGATaGATGTGGCTAGGTCAAGTTGGGAGTGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: HSLCPASGTISR*MWLGQVGSGGQ
Trigger: CTGGCCACCACTCCCAACTTGACCTAGCCACATTCATCTAGAGATGGTTCCTGATGCTGGGCACAGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp CTCAGGAGGAAAGTTGGGCAGGCACCGTCGAGTGTCTaGCACTCAAAAGGAATAAGCTGCTTTCTGTGGTGC +
Preference number: 3 (lower is better)
Translates to: LRRKVGQAPSSV*HSKGISCFLWC
Trigger: GCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGCCTGCCCAACTTTCCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp GAGAGATGCGGGGTAGACAGCTTCACACAGGGCAGCTaGTACCGCATCTCTTTTTACCCGAACTTTCGGAGA +
Preference number: 3 (lower is better)
Translates to: ERCGVDSFTQGS*YRISFYPNFRR
Trigger: TCTCCGAAAGTTCGGGTAAAAAGAGATGCGGTAGCAGCTGCCCTGTGTGAAGCTGTCTACCCCGCATCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCTAGCAAAAATGTCTTaGTATTTTGACCCTCGATCA +
Preference number: 3 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGLAKMS*YFDPRS
Trigger: TGATCGAGGGTCAAAATACAAAGACATTTTTGCTAG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAAGGACTTACATTTCTaGGCACACTTTGGTAGCCTC +
Preference number: 3 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFKDLHF*AHFGSL
Trigger: GAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp CGGCAGCTGCAGAGAGATTACATCATAACTCAGCTGTaGCTGGATTACCCACTCCACACTGGCAGCATTCAA +
Preference number: 3 (lower is better)
Translates to: RQLQRDYIITQL*LDYPLHTGSIQ
Trigger: TTGAATGCTGCCAGTGTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGATGTAATCTCTCTGCAGCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTTCCATGTGAGACTTaGAGTAGACCTGACCTTGAA +
Preference number: 3 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFFPCET*SRPDLE
Trigger: TTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp AGTTGCCTGAAGCATGGAAACTTGGACTTCTCCATCTaGCACGTTCTGGAAGCCTCAAGGCACAAGCTGACA +
Preference number: 3 (lower is better)
Translates to: SCLKHGNLDFSI*HVLEASRHKLT
Trigger: TGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAAGTTTCCATGCTTCAGGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp AGAAAAACTCTCACACTGCTCTCCTCTCAACAGTACTaGCTGTTCCCACTACTCCACATGACACCTACGAGG +
Preference number: 3 (lower is better)
Translates to: RKTLTLLSSQQY*LFPLLHMTPTR
Trigger: CCTCGTAGGTGTCATGTGGAGTAGTGGGAACAGGCAGTACTGTTGAGAGGAGAGCAGTGTGAGAGTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGACAAGATGGATACTTaGCCAACAAGGCAGTGTGTG +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTDKMDT*PTRQCV
Trigger: CACACACTGCCTTGTTGGCAAAGTATCCATCTTGTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGTGACCCTGTTAGGTTaGCAGAATCGAGGCCATAAA +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTVTLLG*QNRGHK
Trigger: TTTATGGCCTCGATTCTGCAAACCTAACAGGGTCAC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACAGGTTCTTTGCACCTaGAGTTCCCATCCACTTCAA +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTQVLCT*SSHPLQ
Trigger: TTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp TTTGACTCCACCCTGTGCAACAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACATCAAACAGAAACTAGC +
Preference number: 3 (lower is better)
Translates to: FDSTLCNSSQNA*AARTKHQTETS
Trigger: GCTAGTTTCTGTTTGATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp CATACACACACACACACACACACACACACACACACATaGACACACACACTCAAAAGTACCAAATCAGGCCCG +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTHT*THTLKSTKSGP
Trigger: CGGGCCTGATTTGGTACTTTTGAGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp GGGATGGTTGCTAGAGTGAGACAGCCCTTCCCCTCTTaGTATGTCTATACCATACCTGAGGCCATTTTTCTT +
Preference number: 3 (lower is better)
Translates to: GMVARVRQPFPS*YVYTIPEAIFL
Trigger: AAGAAAAATGGCCTCAGGTATGGTATAGACATAGCAAGAGGGGAAGGGCTGTCTCACTCTAGCAACCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp GACAGAGATGTAGAGGTGTGGGGATGTTGGTCATCTTaGGCTGGTTCACACAGCCTAGATGAGTATCTGATA +
Preference number: 3 (lower is better)
Translates to: DRDVEVWGCWSS*AGSHSLDEYLI
Trigger: TATCAGATACTCATCTAGGCTGTGTGAACCAGCCCAAGATGACCAACATCCCCACACCTCTACATCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCATTTCTTGGCACACTTaGGTAGCCTCAATAAGTTTT +
Preference number: 3 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFISWHT*VASISF
Trigger: AAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAAT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp CATAACTCAGCTGTGCCTGGATTACCCACTCCACACTaGCAGCATTCAAGGTTAGAAAAATCAAATGGCAGC +
Preference number: 3 (lower is better)
Translates to: HNSAVPGLPTPH*QHSRLEKSNGS
Trigger: GCTGCCATTTGATTTTTCTAACCTTGAATGCTGCCAGTGTGGAGTGGGTAATCCAGGCACAGCTGAGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACAAATGGCAGCACAATaGGTCAGCAGCTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: TPGRRTALENICDPVRFAQMAAQ*VSSFSS
Trigger: AGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGACAAGATGGATACTTaGCCAACAAGGCAGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TPGRRTALENICDPVRFADKMDT*PTRQCV
Trigger: CACACACTGCCTTGTTGGCAAAGTATCCATCTTGTC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAATAATCTGCCAACGATaGAATGCCAGAATGTTTGTG +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTIICQR*NARMFV
Trigger: CACAAACATTCTGGCATTCAATCGTTGGCAGATTAT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTTATGAAAGGTTCATaGAAAGCAAGCAAACAGGTG +
Preference number: 3 (lower is better)
Translates to: HLTRSGSLKAQADSSASTFMKGS*KASKQV
Trigger: CACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp ATCCCCCGCCTGTCAGGTGCTGTTCCTGGGGGTAGCTaGTGCTATAAATTCCATGTACTAACTAATATATTT +
Preference number: 3 (lower is better)
Translates to: IPRLSGAVPGGS*CYKFHVLTNIF
Trigger: AAATATATTAGTTAGTACATGGAATTTATAGCATCAGCTACCCCCAGGAACAGCACCTGACAGGCGGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp TCCACACTGGCAGCATTCAAGGTTAGAAAAATCAAATaGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: STLAAFKVRKIK*QHNWSAASLLL
Trigger: CAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTGATTTTTCTAACCTTGAATGCTGCCAGTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTATTGCTTCATGTGGTaGCCTCTTCCCTTGAAATGG +
Preference number: 3 (lower is better)
Translates to: NCVALCVLISATVIVLGSYCFMW*PLPLKW
Trigger: CCATTTCAAGGGAAGAGGCAACCACATGAAGCAATA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTGAGACTCATCTGCTaGCCACTCAGGAGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLRLIC*PLRRKV
Trigger: AACTTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp CTAGTGTATGTGGCATTTTGGTTCAGTATGAATTACTaGGACTCATCTGCTTGCCACTCAGGAGGAAAGTTG +
Preference number: 3 (lower is better)
Translates to: LVYVAFWFSMNY*DSSACHSGGKL
Trigger: CAACTTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAACCAAAATGCCACATACACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp TACAGGCAATCCTTGCTTTTTATTACCACACTGGATTaGTTCTGTACACAGCTAAGTTGCCTGAAGCATGGA +
Preference number: 3 (lower is better)
Translates to: YRQSLLFITTLD*FCTQLSCLKHG
Trigger: TCCATGCTTCAGGCAACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp TTCACTCAAATGCAACAACTACACCGATGGAAGAACTaGGGACAGATTTTTACAAAGTTCAGAGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: FTQMQQLHRWKN*GQIFTKFREAE
Trigger: CTCAGCCTCTCTGAACTTTGTAAAAATCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTGCATTTGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAAATGGCAGCACAATaGGTCAGCAGCTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQMAAQ*VSSFSS
Trigger: AGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGTGACCCTGTTAGGTTaGCAGAATCGAGGCCATAAA +
Preference number: 3 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEVTLLG*QNRGHK
Trigger: TTTATGGCCTCGATTCTGCAAACCTAACAGGGTCAC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTCCAAAACAGGTTCTTaGCACCTTGAGTTCCCATCC +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFSKTGS*HLEFPS
Trigger: GGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGGA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp AAGGAAAGGCAGAACTCACTTTTCCATGTGAGACTTTaGGTAGACCTGACCTTGAATGCTGTGGATTCATTA +
Preference number: 3 (lower is better)
Translates to: KERQNSLFHVRL*VDLTLNAVDSL
Trigger: TAATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAAAGTGAGTTCTGCCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp GTCTGCCACTCAAAAGGAATAAGCTGCTTTCTGTGGTaGTGTGCTAAGGAAACTGAAAAATACTGCAATATC +
Preference number: 3 (lower is better)
Translates to: VCHSKGISCFLW*CAKETEKYCNI
Trigger: GATATTGCAGTATTTTTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp ACCCGAACTTTCGGAGAATTGTGTTGTACTTATTTATaGACAGAAGACACCCGTTTGCTACTAGGGACATTT +
Preference number: 3 (lower is better)
Translates to: TRTFGELCCTYL*TEDTRLLLGTF
Trigger: AAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACAACACAATTCTCCGAAAGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp AGTGTCTGCCACTCAAAAGGAATAAGCTGCTTTCTGTaGTGCTGTGCTAAGGAAACTGAAAAATACTGCAAT +
Preference number: 3 (lower is better)
Translates to: SVCHSKGISCFL*CCAKETEKYCN
Trigger: ATTGCAGTATTTTTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTAGCAGGGACATTCTaGTACTGGTCCTACTATGAA +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLAGTF*YWSYYE
Trigger: TTCATAGTAGGACCAGTACAAGAATGTCCCTGCTAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAAGGACTTACATTTCTaGGCACACTTTGGTAGCCTC +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFKDLHF*AHFGSL
Trigger: GAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp GCATTCAAGGTTAGAAAAATCAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTTCTGGAATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: AFKVRKIKWQHN*SAASLLLEFFQ
Trigger: CTGGAAAAATTCCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTGATTTTTCTAACCTTGAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCATAATCTGCCAACGATaGAATGCCAGAATGTTTGTG +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFIICQR*NARMFV
Trigger: CACAAACATTCTGGCATTCAATCGTTGGCAGATTAT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCATTTCTTGGCACACTTaGGTAGCCTCAATAAGTTTT +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFISWHT*VASISF
Trigger: AAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAAT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGACACACTCCTAAGTaGTTATGCTCATATACTTCA +
Preference number: 3 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRHTPK*LCSYTS
Trigger: TGAAGTATATGAGCATAACAACTTAGGAGTGTGTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp GTTTTCTTCCTAAGGCTAGACAAGGTAACAATATGTTaGAGGAAGTCCACTTCTACTCATTTAGCTAAACGT +
Preference number: 3 (lower is better)
Translates to: VFFLRLDKVTIC*RKSTSTHLAKR
Trigger: ACGTTTAGCTAAATGAGTAGAAGTGGACTTCCTTCAACATATTGTTACCTTGTCTAGCCTTAGGAAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp CATAAAATACATAAATCAAGAGAGTATTCACTCAAATaGAACAACTACACCGATGGAAGAACTGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: HKIHKSREYSLK*NNYTDGRTGDR
Trigger: TCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTGCATTTGAGTGAATACTCTCTTGATTTATGTATTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CCA 72 bp CAATATGCCCTTTTCAGTTCACCACTGCTTAGCTTTTaGCAAAGATGTTTGAAACCATATGTTACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: QYALFSSPLLSF*QRCLKPYVTEE
Trigger: TTCTTCTGTAACATATGGTTTCAAACATCTTTGCCAAAAGCTAAGCAGTGGTGAACTGAAAAGGGCATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp AAACAAATGAACATAAAGCTGCAATCACTCTTGCATTaGTTTCAAAACAGTAAACTAGGCGGTTTCCTTGGA +
Preference number: 3 (lower is better)
Translates to: KQMNIKLQSLLH*FQNSKLGGFLG
Trigger: TCCAAGGAAACCGCCTAGTTTACTGTTTTGAAATCAATGCAAGAGTGATTGCAGCTTTATGTTCATTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR GCA 72 bp TTTCCATGTGAGACTTTGAGTAGACCTGACCTTGAATaGTGTGGATTCATTATATCTCAAGCATTTATAGTA +
Preference number: 3 (lower is better)
Translates to: FPCETLSRPDLE*CGFIISQAFIV
Trigger: TACTATAAATGCTTGAGATATAATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp ACACAGGATCAGAATGAAAAGATATATCATGCACTGTaGGGTTTAAGAAATGTATTACTGCTGGGATTTGTT +
Preference number: 3 (lower is better)
Translates to: TQDQNEKIYHAL*GLRNVLLLGFV
Trigger: AACAAATCCCAGCAGTAATACATTTCTTAAACCTCACAGTGCATGATATATCTTTTCATTCTGATCCTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR TCA 72 bp CCTTTAAGGAACATGCACCCTTATAAGTCTGTACCCTaGTATGAAAATAGCAGAATGAATTTCAAGTATGAA +
Preference number: 3 (lower is better)
Translates to: PLRNMHPYKSVP*YENSRMNFKYE
Trigger: TTCATACTTGAAATTCATTCTGCTATTTTCATATCAGGGTACAGACTTATAAGGGTGCATGTTCCTTAAAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGGCCGTCCTTCTCCATaGCGCCTGGACGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGGRPSP*RLDAAR
Trigger: GCGGGCGGCGTCCAGGCGGCATGGAGAAGGACGGCC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCACCTCCCCGCGGGGCTaGCGTAACCCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGTSPRG*RNPGAA
Trigger: GGCGGCACCAGGGTTACGCCAGCCCCGCGGGGAGGT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCCCTCCTCGCCGGTCTaGACCCGCACGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGPSSPV*TRTRFN
Trigger: GTTGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTGGTGGAGAGCGGCATaGCCTCCTCGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGWWRAA*PPRRSA
Trigger: TGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGCTGCAGAAGCTGGATaGAGAGACCTCCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGAAEAG*RDLPAG
Trigger: CCCCGCGGGGAGGTCTCTCCATCCAGCTTCTGCAGC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGCCACGCATTCGTACTaGTGGTCAGCGCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGATHSY*WSARHR
Trigger: CCTGTGCCGCGCTGACCAGCAGTACGAATGCGTGGC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCATGCCCAGGCCAGGCTaGCTCTGTAGAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGMPRPG*LCREQE
Trigger: CTCCTGCTCTCTACAGAGCCAGCCTGGCCTGGGCAT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGRLHSL*PSASQS
Trigger: GGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGCCTCCCGAGGGGGCTaGGAGTGTCAGTCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFASRGG*ECQSAL
Trigger: GAGAGCCGACTGACACTCGCAGCCCCCTCGGGAGGC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFPPPRG*WRAACP
Trigger: AGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAAAGGAGGGACAAAGTaGGAGGCTCCAACCCACTGG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGKGGTK*EAPTHW
Trigger: CCAGTGGGTTGGAGCCTCCCACTTTGTCCCTCCTTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCTTTCCCTGCAGGGCTaGAGCCGTCTTCGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFLSLQG*SRLRAE
Trigger: CTCCGCGCGAAGACGGCTTCAGCCCTGCAGGGAAAG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGCACTTTTCTTTCCCTaGAGGGCTGAAGCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGALFFP*RAEAVF
Trigger: GAAGACGGCTTCAGCCCTGCAGGGAAAGAAAAGTGC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCGCGAAACTCCGCCTaGAGAGTCGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPRNSA*RVAAAA
Trigger: GGCGGCGGCGGCGACTCTGCAGGCGGAGTTTCGCGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACCTCCCCGCGGGGCTaGCGTAACCCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTSPRG*RNPGAA
Trigger: GGCGGCACCAGGGTTACGCCAGCCCCGCGGGGAGGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGCTGCAGAAGCTGGATaGAGAGACCTCCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFAAEAG*RDLPAG
Trigger: CCCCGCGGGGAGGTCTCTCCATCCAGCTTCTGCAGC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFPPRGW*RAACPP
Trigger: AGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTCTCAGCCAGTTTCTaGCTGCCCCTAGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFSASF*LPLVYV
Trigger: CACATACACTAGGGGCAGTCAGAAACTGGCTGAGAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACAGGCGCTCGGGCGCTaGGGCTTTCGCCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTQALGR*GFRRCR
Trigger: TCTGCAGCGGCGAAAGCCCCAGCGCCCGAGCGCCTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGGATGTTGGTCATCTTaGGCTGGTTCACACAGCCTA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGGCWSS*AGSHSL
Trigger: TAGGCTGTGTGAACCAGCCCAAGATGACCAACATCC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTCAAGTCGCGGGCCTTaGACACCTTCCCATAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFSSRGP*TPSHRR
Trigger: GCGCCTATGGGAAGGTGTTCAAGGCCCGCGACTTGA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCATGCACTACTCGGTGTaGATGAAGAAAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGMHYSV*MKKVQT
Trigger: GGTCTGGACTTTCTTCATTCACACCGAGTAGTGCAT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTTGACTCCACCCTGTaGAACAGTTCCCAAAATGCC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFDSTL*NSSQNA
Trigger: GGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCACTGAGCTTAGCGCCTaGGAGATGCGGGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFTELSA*EMRGRQ
Trigger: CTGTCTACCCCGCATCTCTCAGGCGCTAAGCTCAGT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGCTGCTTTCTGTGGTaGTGTGCTAAGGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGSCFLW*CAKETE
Trigger: TTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPPRGW*RAACPP
Trigger: AGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGACCTCGGAGAAGCTaGAACATCATATCCTTTATG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGRPRRS*NIISFM
Trigger: CATAAAGGATATGATGTTTCAGCTTCTCCGAGGTCT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACGGTCTAGCTTTACTTaGTCCCCGCCGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTRSSFT*SPPAQA
Trigger: CGCCTGAGCCGGCGGGGAGCAAGTAAAGCTAGACCG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGAAAAACTCTCACACTaGTCTCCTCTCAACAGTACT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGEKLSH*SPLNST
Trigger: AGTACTGTTGAGAGGAGAGCAGTGTGAGAGTTTTTC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACGCATTCGTACTGCTaGTCAGCGCGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTHSYC*SARHRP
Trigger: CGGCCTGTGCCGCGCTGACCAGCAGTACGAATGCGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCGAGGTGTTCTGGCTaGGCGGCAGGTGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPRCSG*AAGGNP
Trigger: TGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGKWQHN*SAASLL
Trigger: AAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCACCGATGGAAGAACTaGGGACAGATTTTTACAAAG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGHRWKN*GQIFTK
Trigger: CTTTGTAAAAATCTGTCCCCAGTTCTTCCATCGGTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTTTCATCTGCCTCTTaGGAAAGGAGCAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFSSAS*ERSKSI
Trigger: AATGCTCTTGCTCCTTTCCCAAGAGGCAGATGAAAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATCAAGTCGCGGGCCTTaGACACCTTCCCATAGGCGC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTSSRGP*TPSHRR
Trigger: GCGCCTATGGGAAGGTGTTCAAGGCCCGCGACTTGA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCTGTTGCATGCACTCTaGGTCAGAAAGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFLLHAL*VRKHRW
Trigger: CCACCTGTGCTTTCTGACTCAGAGTGCATGCAACAG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGAGAATACAGGGGGCTaGAATGGCCCCAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFENTGG*NGPKLS
Trigger: AGAAAGCTTGGGGCCATTTCAGCCCCCTGTATTCTC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCTGCCAACGATTGAATaGCAGAATGTTTGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGLPTIE*QNVCAL
Trigger: TAAAGCACAAACATTCTGGCATTCAATCGTTGGCAG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCATTACCACACTGGATTaGTTCTGTACACAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGITTLD*FCTQLS
Trigger: ACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAAT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCATGAGCACAGTCTGTaGCCAGCATCAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFHEHSL*PASGTI
Trigger: GATGGTTCCTGATGCTGGGCACAGACTGTGCTCATG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACAGGCGCTCGGGCGCTaGGGCTTTCGCCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEQALGR*GFRRCR
Trigger: TCTGCAGCGGCGAAAGCCCCAGCGCCCGAGCGCCTG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGTGCGCTCAACTAGCTaGCGGCCGCCGCTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAVRSTS*RPPLAY
Trigger: GTAGGCGAGCGGCGGCCGCCAGCTAGTTGAGCGCAC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAPPPRG*WRAACP
Trigger: AGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCAAGACTGCTTGTGTTaGATCTGGATTTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGQDCLC*IWISEM
Trigger: CATTTCTGAAATCCAGATCCAACACAAGCAGTCTTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCCATCTGACACGTTCTaGAAGCCTCAAGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFPSDTF*KPQGTS
Trigger: GCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATGG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAGACAGGCACACCTGTaGTCCATGATGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFRQAHL*SMMWRK
Trigger: CTTCCTCCACATCATGGACCACAGGTGTGCCTGTCT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAAGGCAGAGATGGTATaGAATATAAAGGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGKAEMV*NIKDCR
Trigger: TCTACAGTCCTTTATATTTCATACCATCTCTGCCTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTGTCTACTGAATTACTaGTGTGCTACTCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGCLLNY*CATHFA
Trigger: AGCAAAATGAGTAGCACATCAGTAATTCAGTAGACA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGCAGCAGGGCACTCTaGCCTCGGAAAGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASSRAL*PRKAAR
Trigger: GCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGCTGCT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCACTTTAAGATCAAACTaGGAGTTGTTGGTGATCACA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGTLRSN*ELLVIT
Trigger: TGTGATCACCAACAACTCTCAGTTTGATCTTAAAGT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTGGACTTCTCCATCTaGCACGTTCTGGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFLDFSI*HVLEAS
Trigger: TGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGGCCGTCCTTCTCCATaGCGCCTGGACGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEGRPSP*RLDAAR
Trigger: GCGGGCGGCGTCCAGGCGGCATGGAGAAGGACGGCC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCCCTCCTCGCCGGTCTaGACCCGCACGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSPSSPV*TRTRFN
Trigger: GTTGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAATATATTTCAGAAGTaGCGGGAGATAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGNIFQK*REIDKM
Trigger: CATCTTGTCTATCTCCCGGCACTTCTGAAATATATT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCCCGGCCTCGCCCACTaGCTCTCTCCTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSPGLAH*LSPAKG
Trigger: CCCTTTGGCAGGAGAGAGGCAGTGGGCGAGGCCGGG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCTTTATCCAAGTAAGTaGTCAAGTCTTGATCGACAT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGLYPSK*SSLDRH
Trigger: ATGTCGATCAAGACTTGACCACTTACTTGGATAAAG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGTTAGAAAAATCAAATaGCAGCACAATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGVRKIK*QHNWSA
Trigger: TGCTGACCAATTGTGCTGCCATTTGATTTTTCTAAC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTACAGGGGGCTGAAATaGCCCCAAGCTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFYRGLK*PQAFFQ
Trigger: TTGGAAGAAAGCTTGGGGCCATTTCAGCCCCCTGTA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTTTTATTACCACACTaGATTGCTTCTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFLLPH*IASVHS
Trigger: GCTGTGTACAGAAGCAATCCAGTGTGGTAATAAAAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATCAAGTTGGGAGTGGTaGCCAGGCCTAGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTSSWEW*PGLDRH
Trigger: GTGCCTGTCTAGGCCTGGCCACCACTCCCAACTTGA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCAGCAGCCTGGAATGTaGTTTATATTCTTGATTAGT +
Preference number: 4 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGQQPGM*FIFLIS
Trigger: ACTAATCAAGAATATAAACCACATTCCAGGCTGCTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGAGCAGAGGGGCGAATaGGGCGGGGGATTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAEQRGE*GGGFLS
Trigger: GCTGAGAAATCCCCCGCCTCATTCGCCCCTCTGCTC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAGGGAAGCTTCTTCATaGGGGCAGACAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTREASS*GQTRGG
Trigger: GCCTCCTCTTGTCTGCCCTCATGAAGAAGCTTCCCT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGGATGGTTGCTAGAGTaGGACAGCCCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTGWLLE*DSPSPL
Trigger: AAGAGGGGAAGGGCTGTCTCACTCTAGCAACCATCC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGCCACGCATTCGTACTaGTGGTCAGCGCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAATHSY*WSARHR
Trigger: CCTGTGCCGCGCTGACCAGCAGTACGAATGCGTGGC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTGGTGGAGAGCGGCATaGCCTCCTCGCCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSWWRAA*PPRRSA
Trigger: TGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGAGCAAGACTTCGGGTaGTCTGTACCACAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTEQDFG*SVPQRD
Trigger: GTCACGCTGTGGTACAGAGCACCCGAAGTCTTGCTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACGCATTCGTACTGCTaGTCAGCGCGGCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATHSYC*SARHRP
Trigger: CGGCCTGTGCCGCGCTGACCAGCAGTACGAATGCGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGGGCACTCCAGGCTCTaGAACTTTATCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFGHSRL*NFIQVS
Trigger: ACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACGGGGGTGGCGTAGCTaGACTGGAGCAAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFARGWRS*TGARLR
Trigger: CCGAAGTCTTGCTCCAGTCCAGCTACGCCACCCCCG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACCGAGGTGTTCTGGCTaGGCGGCAGGTGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAPRCSG*AAGGNP
Trigger: TGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACACATCAAACAACCTaGCCACGTTGGGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTHQTT*PRWGAR
Trigger: TCGAGCACCCCAACGTGGTCAGGTTGTTTGATGTGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACAGAATCATTGCACCTaGGGGGCCCAGTCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEQNHCT*GAQSRR
Trigger: CCGACGCGACTGGGCCCCTCAGGTGCAATGATTCTG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCCCGGCCTCGCCCACTaGCTCTCTCCTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEPGLAH*LSPAKG
Trigger: CCCTTTGGCAGGAGAGAGGCAGTGGGCGAGGCCGGG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTCAGAGAGCTGTGCTaGACCCACAGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAFRELC*THRVDP
Trigger: CGGGTCCACCCTGTGGGTGCAGCACAGCTCTCTGAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGTGCGCTCAACTAGCTaGCGGCCGCCGCTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFVRSTS*RPPLAY
Trigger: GTAGGCGAGCGGCGGCCGCCAGCTAGTTGAGCGCAC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACTAGGCGGTTTCCTTaGAGAAGCAGAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTRRFP*RSRACP
Trigger: TGGACAGGCTCTGCTTCTCCAAGGAAACCGCCTAGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGGGCAGATTTTGAATaGAAAGCCTGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTWADFE*KACLGR
Trigger: CCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTCAGTATGAATTACTaGGACTCATCTGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFFSMNY*DSSACH
Trigger: GTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGCAGCAGGGCACTCTaGCCTCGGAAAGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVESSRAL*PRKAAR
Trigger: GCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGCTGCT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACTGAGCTTAGCGCCTaGGAGATGCGGGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATELSA*EMRGRQ
Trigger: CTGTCTACCCCGCATCTCTCAGGCGCTAAGCTCAGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCTCAAGGCACAAGCTaGCAGTTCTGCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPQGTS*QFCFYR
Trigger: TCTGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAATGCAACAAGCTTTTaGGGTGTTGGGAATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFNATSF*GVGNCW
Trigger: CCAACAATTCCCAACACCTCAAAAGCTTGTTGCATT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTCAGTCCAGAATCATTaGACTTTTCTTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFSVQNH*TFLSLQ
Trigger: CTGCAGGGAAAGAAAAGTGCAATGATTCTGGACTGA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATGGGGCTTTCGCCGCTaGAGAAGCTGGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAWGFRR*RSWMER
Trigger: TCTCTCCATCCAGCTTCTGCAGCGGCGAAAGCCCCA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGCCATTCACAGTGTGTaGTTCCTGAGAGAAAATCAT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFAIHSV*FLRENH
Trigger: ATGATTTTCTCTCAGGAAGCACACACTGTGAATGGC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTCAGAGAGCTGTGCTaGACCCACAGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSFRELC*THRVDP
Trigger: CGGGTCCACCCTGTGGGTGCAGCACAGCTCTCTGAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGCTTTCAGAGAGCTGTaGTGCACCCACAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAAFREL*CTHRVD
Trigger: GTCCACCCTGTGGGTGCAGCACAGCTCTCTGAAAGC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCGCCGCTGCAGAAGCTaGATGGAGAGACCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRRCRS*MERPPR
Trigger: GCGGGGAGGTCTCTCCATCCAGCTTCTGCAGCGGCG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCTTTATGGTTTCAGTaGGCACTCCAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPLWFQ*ALQALE
Trigger: TTCCAGAGCCTGGAGTGCCCACTGAAACCATAAAGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCAGTCTTCTTCTCCTaGGAGTCCAATCACGTCCAA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPVFFS*ESNHVQ
Trigger: TTGGACGTGATTGGACTCCCAGGAGAAGAAGACTGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTATGCCCAGGCCAGGCTaGCTCTGTAGAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSMPRPG*LCREQE
Trigger: CTCCTGCTCTCTACAGAGCCAGCCTGGCCTGGGCAT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCATAAGCTGCTTTCTGTaGTGCTGTGCTAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFISCFL*CCAKET
Trigger: AGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTAT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGGTCAAGTTGGGAGTaGTGGCCAGGCCTAGACAGG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFARSSWE*WPGLDR
Trigger: CCTGTCTAGGCCTGGCCACCACTCCCAACTTGACCT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGTGGCTAGGTCAAGTTaGGAGTGGTGGCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAVARSS*EWWPGL
Trigger: TAGGCCTGGCCACCACTCCCAACTTGACCTAGCCAC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGCTGCACCCACAGGGTaGACCCGACAGGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEAAPTG*TRQATV
Trigger: CACAGTGGCCTGTCGGGTCCACCCTGTGGGTGCAGC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp GACTGTGTCCCAGGCAGTGAATTTCCACACTGCTTCTaGGGTCTGCAGAACTCAAAGCACCAAAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: DCVPGSEFPHCF*GLQNSKHQNRA
Trigger: TGCTCTGTTTTGGTGCTTTGAGTTCTGCAGACCCAAGAAGCAGTGTGGAAATTCACTGCCTGGGACACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTVGIKF*ARANGV
Trigger: AACCCCATTTGCTCGTGCTCAAAACTTGATTCCCAC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATCCCACTACTCCACATaGCACCTACGAGGGCACTAC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASHYST*HLRGHY
Trigger: GTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGGA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGGATGGTTGCTAGAGTaGGACAGCCCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAGWLLE*DSPSPL
Trigger: AAGAGGGGAAGGGCTGTCTCACTCTAGCAACCATCC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTCAGAAGTAGGTCTTTaGCTAGTTCATCGATATCTG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFSEVGL*LVHRYL
Trigger: CAGATATCGATGAACTAGGCAAAGACCTACTTCTGA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAATCATAACTCAGCTGTaGCTGGATTACCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTIITQL*LDYPLH
Trigger: GTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGAT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCACAGGTAATTTAGTTTaGTTGGGACAGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFTGNLV*LGQLLH
Trigger: ATGGAGAAGCTGTCCCAAGCAAACTAAATTACCTGT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGCTTTCAGAGAGCTGTaGTGCACCCACAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSAFREL*CTHRVD
Trigger: GTCCACCCTGTGGGTGCAGCACAGCTCTCTGAAAGC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCGGGGGTGGCGTAGCTaGACTGGAGCAAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVERGWRS*TGARLR
Trigger: CCGAAGTCTTGCTCCAGTCCAGCTACGCCACCCCCG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACTCAGGAGGAAAGTTaGGCAGGCACCGTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATQEES*AGTVEC
Trigger: ACACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp GCCCCAAGCTTTCTTCCAAAACAGGTTCTTTGCACCTaGAGTTCCCATCCACTTCAAAGGAGGGACAAAGTG +
Preference number: 4 (lower is better)
Translates to: APSFLPKQVLCT*SSHPLQRRDKV
Trigger: CACTTTGTCCCTCCTTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGGAAGAAAGCTTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp ATTTTGGTTCAGTATGAATTACTGAGACTCATCTGCTaGCCACTCAGGAGGAAAGTTGGGCAGGCACCGTCG +
Preference number: 4 (lower is better)
Translates to: ILVQYELLRLIC*PLRRKVGQAPS
Trigger: CGACGGTGCCTGCCCAACTTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAACCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAATGTCTTTGTATTTTaGCCCTCGATCAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFNVFVF*PSIKGK
Trigger: CTTTCCTTTGATCGAGGGTCAAAATACAAAGACATT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTGTCTACTGAATTACTaGTGTGCTACTCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFCLLNY*CATHFA
Trigger: AGCAAAATGAGTAGCACATCAGTAATTCAGTAGACA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTCCCACTACTCCACATaGCACCTACGAGGGCACTAC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSSHYST*HLRGHY
Trigger: GTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGGA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCTGACCACGTTGGGGTaGTCGAAGGTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELTTLG*SKVSRC
Trigger: GCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGAGCAAGACTTCGGGTaGTCTGTACCACAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEEQDFG*SVPQRD
Trigger: GTCACGCTGTGGTACAGAGCACCCGAAGTCTTGCTC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAGACCTGACCTTGAATaGTGTGGATTCATTATATCT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFRPDLE*CGFIIS
Trigger: AGATATAATGAATCCACAGCATTCAAGGTCAGGTCT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCAATCCTAACACTTTCTaGCTTCAGTTGTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFNPNTF*LQLYFH
Trigger: GTGAAAGTACAACTGAAGGCAGAAAGTGTTAGGATT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACTGCTTCTTGGGTCTaGAGAACTCAAAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTASWV*RTQSTK
Trigger: TTTGGTGCTTTGAGTTCTGCAGACCCAAGAAGCAGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTATTTGTCCGCTGCTaGTCACCAGAATGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTLFVRC*SPECSV
Trigger: CACAGAACATTCTGGTGACCAGCAGCGGACAAATAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGAGATCCACGGGGGTaGCGTAGCTGGACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVERDPRG*RSWTGA
Trigger: TGCTCCAGTCCAGCTACGCCACCCCCGTGGATCTCT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGAGATCCACGGGGGTaGCGTAGCTGGACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRDPRG*RSWTGA
Trigger: TGCTCCAGTCCAGCTACGCCACCCCCGTGGATCTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACAAACAGGTGGTGCATaGGAACAGCTTAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTQTGGA*EQLKQS
Trigger: AGATTGCTTAAGCTGTTCCCATGCACCACCTGTTTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACAACAACTACACCGATaGAAGAACTGGGGACAGATT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTQQLHR*KNWGQI
Trigger: AATCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGAGGTGTGGGGATGTTaGTCATCTTGGGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAEVWGC*SSWAGS
Trigger: TGAACCAGCCCAAGATGACCAACATCCCCACACCTC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAGCAGCCTGGAATGTaGTTTATATTCTTGATTAGT +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQQPGM*FIFLIS
Trigger: ACTAATCAAGAATATAAACCACATTCCAGGCTGCTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTACACATCAAACAACCTaGCCACGTTGGGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSTHQTT*PRWGAR
Trigger: TCGAGCACCCCAACGTGGTCAGGTTGTTTGATGTGT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACCAGAAAAGAAATGCTaGGGACATGGGGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTPEKKC*GHGVNF
Trigger: AAAGTTAACCCCATGTCCTCAGCATTTCTTTTCTGG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACTGTTGCATGCACTCTaGGTCAGAAAGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELLHAL*VRKHRW
Trigger: CCACCTGTGCTTTCTGACTCAGAGTGCATGCAACAG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACAT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASSQNA*AARTKH
Trigger: ATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGAGAATACAGGGGGCTaGAATGGCCCCAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSENTGG*NGPKLS
Trigger: AGAAAGCTTGGGGCCATTTCAGCCCCCTGTATTCTC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGGCACTACATCACGTaGGGGAAGCTTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSGHYIT*GKLLHE
Trigger: CTCATGAAGAAGCTTCCCTCACGTGATGTAGTGCCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGGGCACTACATCACGTaGGGGAAGCTTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEGHYIT*GKLLHE
Trigger: CTCATGAAGAAGCTTCCCTCACGTGATGTAGTGCCC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGGGGCTTTCGCCGCTaGAGAAGCTGGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFWGFRR*RSWMER
Trigger: TCTCTCCATCCAGCTTCTGCAGCGGCGAAAGCCCCA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAAAAGCTGTTTACAATaGCCAGGCCAGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAKSCLQ*PGQAGS
Trigger: AGAGCCAGCCTGGCCTGGGCATTGTAAACAGCTTTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGATCTAACTGTTGCATaGACTCTGAGTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTDLTVA*TLSQKA
Trigger: TGCTTTCTGACTCAGAGTGCATGCAACAGTTAGATC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGCTCAGATGAATCAGTaGAGTGAGTTTTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFAQMNQ*SEFLNS
Trigger: TGAATTTAAAAACTCACTGCACTGATTCATCTGAGC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTAGCGCCTGAGAGATaGGGGGTAGACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELAPER*GVDSFT
Trigger: TGTGAAGCTGTCTACCCCGCATCTCTCAGGCGCTAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGAAAAACTCTCACACTaGTCTCCTCTCAACAGTACT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTEKLSH*SPLNST
Trigger: AGTACTGTTGAGAGGAGAGCAGTGTGAGAGTTTTTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGTACACAGCTAAGTTaGCTGAAGCATGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTCTQLS*LKHGNL
Trigger: CAAGTTTCCATGCTTCAGGCAACTTAGCTGTGTACA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACATGAGCACAGTCTGTaGCCAGCATCAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEHEHSL*PASGTI
Trigger: GATGGTTCCTGATGCTGGGCACAGACTGTGCTCATG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTGAGCACGAGCAAATaGGGTTCAGACTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELSTSK*GSDWPL
Trigger: CAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGCACCACCCAGGCACTaGTCTCTGCCTGGCATCTAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFAPPRH*SLPGIY
Trigger: ATAGATGCCAGGCAGAGACCAGTGCCTGGGTGGTGC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCCATCTGACACGTTCTaGAAGCCTCAAGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSPSDTF*KPQGTS
Trigger: GCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATGG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCGGTGTTGGGAATTGTTaGTTGTTAAAATCCCTTTTA +
Preference number: 4 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFGVGNC*LLKSLL
Trigger: TAAAAGGGATTTTAACAACCAACAATTCCCAACACC...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAATGGAGAGCACCATGTaGACAAGCCAGGATGGTAGC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEMESTM*TSQDGS
Trigger: GCTACCATCCTGGCTTGTCCACATGGTGCTCTCCAT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTCAAGTTGGGAGTGGTaGCCAGGCCTAGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVESSWEW*PGLDRH
Trigger: GTGCCTGTCTAGGCCTGGCCACCACTCCCAACTTGA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGTGGCTAGGTCAAGTTaGGAGTGGTGGCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFVARSS*EWWPGL
Trigger: TAGGCCTGGCCACCACTCCCAACTTGACCTAGCCAC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGTGTGGCCTGTAGATaGAGAGAAAACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASVACR*RENSSL
Trigger: CAGGCTGCTGTTTTCTCTCCATCTACAGGCCACACT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp TTTCAGAAGTGCCGGGAGATAGACAAGATGGATACTTaGCCAACAAGGCAGTGTGTGGCAGAAAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: FQKCREIDKMDT*PTRQCVAESTV
Trigger: CACTGTACTTTCTGCCACACACTGCCTTGTTGGCAAAGTATCCATCTTGTCTATCTCCCGGCACTTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAATGCACTACTCGGTGTaGATGAAGAAAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAMHYSV*MKKVQT
Trigger: GGTCTGGACTTTCTTCATTCACACCGAGTAGTGCAT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGGGAAGCTTCTTCATaGGGGCAGACAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEREASS*GQTRGG
Trigger: GCCTCCTCTTGTCTGCCCTCATGAAGAAGCTTCCCT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCCTCAAGGCACAAGCTaGCAGTTCTGCTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSPQGTS*QFCFYR
Trigger: TCTGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACTGTGTCCCAGGCAGTaGATTTCCACACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELCPRQ*ISTLLL
Trigger: AAGAAGCAGTGTGGAAATTCACTGCCTGGGACACAG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVERLHSL*PSASQS
Trigger: GGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAAAAGCTGTTTACAATaGCCAGGCCAGGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEKSCLQ*PGQAGS
Trigger: AGAGCCAGCCTGGCCTGGGCATTGTAAACAGCTTTT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGCACCGTCGAGTGTCTaGCACTCAAAAGGAATAAGC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSAPSSV*HSKGIS
Trigger: GCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTCACACAGGGCAGCTaGTACCGCATCTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAFTQGS*YRISFY
Trigger: GTAAAAAGAGATGCGGTAGCAGCTGCCCTGTGTGAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACATGTTACAAATGCATaGAGCTTATTTGGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTHVTNA*SLFGGL
Trigger: TAAGCCCCCAAATAAGCTGCATGCATTTGTAACATG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGCATTTCTAATGGGTaGCATGAGCACAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSGISNG*HEHSLC
Trigger: GCACAGACTGTGCTCATGGCACCCATTAGAAATGCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGGCATTTCTAATGGGTaGCATGAGCACAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEGISNG*HEHSLC
Trigger: GCACAGACTGTGCTCATGGCACCCATTAGAAATGCC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCCAGTCTTCTTCTCCTaGGAGTCCAATCACGTCCAA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSPVFFS*ESNHVQ
Trigger: TTGGACGTGATTGGACTCCCAGGAGAAGAAGACTGG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAAGTATTGCTTCATGTaGTTGCCTCTTCCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTKYCFM*LPLPLK
Trigger: TTTCAAGGGAAGAGGCAACCACATGAAGCAATACTT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAATGTCTTTGTATTTTaGCCCTCGATCAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTNVFVF*PSIKGK
Trigger: CTTTCCTTTGATCGAGGGTCAAAATACAAAGACATT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGTTCCTGGGGGTAGCTaGTGCTATAAATTCCATGTA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAVPGGS*CYKFHV
Trigger: TACATGGAATTTATAGCATCAGCTACCCCCAGGAAC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTCACACAGCCTAGATaGGTATCTGATATACACAAT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTFTQPR*VSDIHN
Trigger: ATTGTGTATATCAGATACTCATCTAGGCTGTGTGAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCACACCTGTGGTCCATaGTGTGGAGGAAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFHTCGP*CGGRWR
Trigger: TCTCCATCTTCCTCCACATCATGGACCACAGGTGTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCACACCTGTGGTCCATaGTGTGGAGGAAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEHTCGP*CGGRWR
Trigger: TCTCCATCTTCCTCCACATCATGGACCACAGGTGTG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGGAACCATCTCTAGATaGATGTGGCTAGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAGTISR*MWLGQV
Trigger: AACTTGACCTAGCCACATTCATCTAGAGATGGTTCC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAATCATAACTCAGCTGTaGCTGGATTACCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEIITQL*LDYPLH
Trigger: GTGGAGTGGGTAATCCAGGCACAGCTGAGTTATGAT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGAATTATTTTCTGAGTaGAGCAACCTCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTELFSE*SNLHSL
Trigger: CAAAGAATGGAGGTTGCTGCACTCAGAAAATAATTC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAGACCTGACCTTGAATaGTGTGGATTCATTATATCT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTRPDLE*CGFIIS
Trigger: AGATATAATGAATCCACAGCATTCAAGGTCAGGTCT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATTTTCAGTTCACCACTaGTTAGCTTTTGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTFSVHH*LAFGKD
Trigger: ATCTTTGCCAAAAGCTAAGCAGTGGTGAACTGAAAA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAACCTTGGGGCAATATaGCCTTTTCAGTTCACCACT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFANLGAI*PFQFTT
Trigger: AGTGGTGAACTGAAAAGGGCATATTGCCCCAAGGTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTAGCGCCTGAGAGATaGGGGGTAGACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLAPER*GVDSFT
Trigger: TGTGAAGCTGTCTACCCCGCATCTCTCAGGCGCTAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAATCCTAACACTTTCTaGCTTCAGTTGTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTNPNTF*LQLYFH
Trigger: GTGAAAGTACAACTGAAGGCAGAAAGTGTTAGGATT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATATACAGGCAATCCTTaGTTTTTATTACCACACTGG +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTYTGNP*FLLPHW
Trigger: CCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACTGCTTCTTGGGTCTaGAGAACTCAAAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATASWV*RTQSTK
Trigger: TTTGGTGCTTTGAGTTCTGCAGACCCAAGAAGCAGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGTGAATTTCCACACTaGTTCTTGGGTCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASEFPH*FLGLQN
Trigger: GTTCTGCAGACCCAAGAAGCAGTGTGGAAATTCACT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCAGCCCTTCCCCTCTTaGTATGTCTATACCATACCT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSQPFPS*YVYTIP
Trigger: AGGTATGGTATAGACATAGCAAGAGGGGAAGGGCTG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACACTTTATCCAAGTAAGTaGTCAAGTCTTGATCGACAT +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTLYPSK*SSLDRH
Trigger: ATGTCGATCAAGACTTGACCACTTACTTGGATAAAG...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACTAGGCGGTTTCCTTaGAGAAGCAGAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETRRFP*RSRACP
Trigger: TGGACAGGCTCTGCTTCTCCAAGGAAACCGCCTAGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGTTAGAAAAATCAAATaGCAGCACAATTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HLTRSGSLKAQADSSASTVRKIK*QHNWSA
Trigger: TGCTGACCAATTGTGCTGCCATTTGATTTTTCTAAC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATGTTATAACAAACCCTaGGGTGGAATTCGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFACYNKP*GGIRPF
Trigger: GAAAGGCCGAATTCCACCCCAGGGTTTGTTATAACA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTGAGCACGAGCAAATaGGGTTCAGACTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLSTSK*GSDWPL
Trigger: CAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAGAGATGTAGAGGTGTaGGGATGTTGGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSRDVEV*GCWSSW
Trigger: CCAAGATGACCAACATCCCCACACCTCTACATCTCT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGATGGAGAGCACCATGTaGACAAGCCAGGATGGTAGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEMESTM*TSQDGS
Trigger: GCTACCATCCTGGCTTGTCCACATGGTGCTCTCCAT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGACAGGCACACCTGTaGTCCATGATGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRQAHL*SMMWRK
Trigger: CTTCCTCCACATCATGGACCACAGGTGTGCCTGTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp AGCCAGTTTCTGACTGCCCCTAGTGTATGTGGCATTTaGGTTCAGTATGAATTACTGAGACTCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SQFLTAPSVCGI*VQYELLRLICL
Trigger: CAAGCAGATGAGTCTCAGTAATTCATACTGAACCAAAATGCCACATACACTAGGGGCAGTCAGAAACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGGGCAGATTTTGAATaGAAAGCCTGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFWADFE*KACLGR
Trigger: CCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGTTCCCAAAATGCCTaGGCCGCCAGAACCAAACAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFSSQNA*AARTKH
Trigger: ATGTTTGGTTCTGGCGGCTCAGGCATTTTGGGAACT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAGGTTCTTTGCACCTTaGGTTCCCATCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSRFFAP*VPIHFK
Trigger: TTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTCTCAGCCAGTTTCTaGCTGCCCCTAGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFSASF*LPLVYV
Trigger: CACATACACTAGGGGCAGTCAGAAACTGGCTGAGAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTGGACTTCTCCATCTaGCACGTTCTGGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELDFSI*HVLEAS
Trigger: TGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGAACCATCTCTAGATaGATGTGGCTAGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSGTISR*MWLGQV
Trigger: AACTTGACCTAGCCACATTCATCTAGAGATGGTTCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTGTGTCCCAGGCAGTaGATTTCCACACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLCPRQ*ISTLLL
Trigger: AAGAAGCAGTGTGGAAATTCACTGCCTGGGACACAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACCAAAACAGGTTCTTTaGACCTTGAGTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEPKQVL*TLSSHP
Trigger: TGGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAGCTGCTTTCTGTGGTaGTGTGCTAAGGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWESCFLW*CAKETE
Trigger: TTCAGTTTCCTTAGCACAGCACCACAGAAAGCAGCT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATCAAAAGGAATAAGCTaGTTTCTGTGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFASKGIS*FLWCCA
Trigger: AGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGCACCGTCGAGTGTCTaGCACTCAAAAGGAATAAGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEAPSSV*HSKGIS
Trigger: GCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTCCTCTCAACAGTACTaGCTGTTCCCACTACTCCAC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVESSQQY*LFPLLH
Trigger: GTGGAGTAGTGGGAACAGGCAGTACTGTTGAGAGGA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAGTGAATTTCCACACTaGTTCTTGGGTCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWESEFPH*FLGLQN
Trigger: GTTCTGCAGACCCAAGAAGCAGTGTGGAAATTCACT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCCTTTATGGTTTCAGTaGGCACTCCAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFPLWFQ*ALQALE
Trigger: TTCCAGAGCCTGGAGTGCCCACTGAAACCATAAAGG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTACCCACTCCACACTaGCAGCATTCAAGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELPTPH*QHSRLE
Trigger: TTCTAACCTTGAATGCTGCCAGTGTGGAGTGGGTAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGCACAGCCTGGGGGATaGAGAAAAGATCATTTGATA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEAQPGG*RKDHLI
Trigger: TATCAAATGATCTTTTCTCCATCCCCCAGGCTGTGC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAACTTTCTGTGTCCTCTaGTTACTAGAGCCAACTGAG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWETFCVL*LLEPTE
Trigger: CTCAGTTGGCTCTAGTAACCAGAGGACACAGAAAGT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACAACAACTACACCGATaGAAGAACTGGGGACAGATT +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEQQLHR*KNWGQI
Trigger: AATCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTACAGGGGGCTGAAATaGCCCCAAGCTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEYRGLK*PQAFFQ
Trigger: TTGGAAGAAAGCTTGGGGCCATTTCAGCCCCCTGTA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCATAGGGGCTTTAACTaGACTCTAGTTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEHRGFN*TLVPGS
Trigger: GCTCCCAGGAACTAGAGTCCAGTTAAAGCCCCTATG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTGTTATAACAAACCCTaGGGTGGAATTCGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSCYNKP*GGIRPF
Trigger: GAAAGGCCGAATTCCACCCCAGGGTTTGTTATAACA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACGGAAGGCTTTCAAGTaGGAATCAAGTTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWERKAFK*ESSFEH
Trigger: GTGCTCAAAACTTGATTCCCACTTGAAAGCCTTCCG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGGATGTTGGTCATCTTaGGCTGGTTCACACAGCCTA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFGCWSS*AGSHSL
Trigger: TAGGCTGTGTGAACCAGCCCAAGATGACCAACATCC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGTGTGGCCTGTAGATaGAGAGAAAACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVESVACR*RENSSL
Trigger: CAGGCTGCTGTTTTCTCTCCATCTACAGGCCACACT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp ATACAGGCAATCCTTGCTTTTTATTACCACACTGGATaGCTTCTGTACACAGCTAAGTTGCCTGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: IQAILAFYYHTG*LLYTAKLPEAW
Trigger: CCATGCTTCAGGCAACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAGACCTCGGAGAAGCTaGAACATCATATCCTTTATG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSRPRRS*NIISFM
Trigger: CATAAAGGATATGATGTTTCAGCTTCTCCGAGGTCT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGTAGAGAGCAGGAGTaGGCACAAGGCACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFCREQE*AQGTRN
Trigger: ATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTACA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAAATTTAATCAATGTTaGAAGGCCACCATGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAKFNQC*KATMLG
Trigger: CCCTAGCATGGTGGCCTTTCAACATTGATTAAATTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGTGGGAATCAAGTTTTaGGCACGAGCAAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEVGIKF*ARANGV
Trigger: AACCCCATTTGCTCGTGCTCAAAACTTGATTCCCAC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTACCACAGCCAAAACTaGATGCTCTGTACAATGACT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSYHSQN*MLCTMT
Trigger: AGTCATTGTACAGAGCATTCAGTTTTGGCTGTGGTA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTTTTATTTGTCCGCTaGTGGTCACCAGAATGTTCT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSVLFVR*WSPECS
Trigger: AGAACATTCTGGTGACCAGCAGCGGACAAATAAAAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGTTTTATTTGTCCGCTaGTGGTCACCAGAATGTTCT +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEVLFVR*WSPECS
Trigger: AGAACATTCTGGTGACCAGCAGCGGACAAATAAAAC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGATCTAACTGTTGCATaGACTCTGAGTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSDLTVA*TLSQKA
Trigger: TGCTTTCTGACTCAGAGTGCATGCAACAGTTAGATC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGAGTATTCACTCAAATaGAACAACTACACCGATGGA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAEYSLK*NNYTDG
Trigger: TCCATCGGTGTAGTTGTTGCATTTGAGTGAATACTC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTTGACTCCACCCTGTaGAACAGTTCCCAAAATGCC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFDSTL*NSSQNA
Trigger: GGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACAGGTAATTTAGTTTaGTTGGGACAGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATGNLV*LGQLLH
Trigger: ATGGAGAAGCTGTCCCAAGCAAACTAAATTACCTGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTCAAAAGGAATAAGCTaGTTTCTGTGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSSKGIS*FLWCCA
Trigger: AGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACATGTTACAAATGCATaGAGCTTATTTGGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAHVTNA*SLFGGL
Trigger: TAAGCCCCCAAATAAGCTGCATGCATTTGTAACATG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCAGCCCTTCCCCTCTTaGTATGTCTATACCATACCT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEQPFPS*YVYTIP
Trigger: AGGTATGGTATAGACATAGCAAGAGGGGAAGGGCTG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGCTATATTTTCATCTaGCTCTTGGGAAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSGYIFI*LLGKEQ
Trigger: TTGCTCCTTTCCCAAGAGGCAGATGAAAATATAGCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGGGCACTCCAGGCTCTaGAACTTTATCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFGHSRL*NFIQVS
Trigger: ACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAACATCATATCCTTTATaGTTTCAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWETSYPL*FQWALQ
Trigger: CTGGAGTGCCCACTGAAACCATAAAGGATATGATGT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATGCTTGTGTTGGATCTaGATTTCAGAAATGGCGAAT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFACLCWI*ISEMAN
Trigger: ATTCGCCATTTCTGAAATCCAGATCCAACACAAGCA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTTAACCAGGCCCTATaGCAATGCAGAAACACTAAT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAFNQAL*QCRNTN
Trigger: ATTAGTGTTTCTGCATTGCCATAGGGCCTGGTTAAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGAGATGTAGAGGTGTaGGGATGTTGGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRDVEV*GCWSSW
Trigger: CCAAGATGACCAACATCCCCACACCTCTACATCTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp AAAGGAAAGGCAGAACTCACTTTTCCATGTGAGACTTaGAGTAGACCTGACCTTGAATGCTGTGGATTCATT +
Preference number: 4 (lower is better)
Translates to: KGKAELTFPCET*SRPDLECCGFI
Trigger: AATGAATCCACAGCATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAAAGTGAGTTCTGCCTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
3UTR CAA 72 bp CGCATCTCTTTTTACCCGAACTTTCGGAGAATTGTGTaGTACTTATTTATGCACAGAAGACACCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RISFYPNFRRIV*YLFMHRRHPFA
Trigger: AGCAAACGGGTGTCTTCTGTGCATAAATAAGTACAACACAATTCTCCGAAAGTTCGGGTAAAAAGAGATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAGAAGACTATTTTGGTaGATCACCTTCAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFARRLFW*ITFSEQ
Trigger: TTGTTCACTGAAGGTGATTCACCAAAATAGTCTTCT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTAATCTAACTGTTGCATaGTCTAACTGTTGCATGCAC +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSNLTVA*SNCCMH
Trigger: GTGCATGCAACAGTTAGATCATGCAACAGTTAGATT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAAAGTTCAGAGAGGCTaGGATGCCCTTTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFKVQRG*DALSFC
Trigger: ACAGAATGAAAGGGCATCTCAGCCTCTCTGAACTTT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGATATGTAGGTTGTTTTaGCTCCACCCTGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEICRLF*LHPVQQ
Trigger: CTGTTGCACAGGGTGGAGTCAAAACAACCTACATAT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCATATGTAGGTTGTTTTaGCTCCACCCTGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFICRLF*LHPVQQ
Trigger: CTGTTGCACAGGGTGGAGTCAAAACAACCTACATAT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACCATGGGATTTCTTATaGAAGCTAAATGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAPWDFL*KLNGQV
Trigger: AACTTGTCCATTTAGCTTTCATAAGAAATCCCATGG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAGGTTCTTTGCACCTTaGGTTCCCATCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVERFFAP*VPIHFK
Trigger: TTTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAAGGTAACAATATGTTaGAGGAAGTCCACTTCTACT +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAKVTIC*RKSTST
Trigger: AGTAGAAGTGGACTTCCTTCAACATATTGTTACCTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACATTTTGGTTCAGTATaGATTACTGAGACTCATCTG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAHFGSV*ITETHL
Trigger: CAGATGAGTCTCAGTAATTCATACTGAACCAAAATG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAACTTTAAGATCAAACTaGGAGTTGTTGGTGATCACA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFATLRSN*ELLVIT
Trigger: TGTGATCACCAACAACTCTCAGTTTGATCTTAAAGT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGTTCCTGGGGGTAGCTaGTGCTATAAATTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEVPGGS*CYKFHV
Trigger: TACATGGAATTTATAGCATCAGCTACCCCCAGGAAC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATCAGAAGTAGGTCTTTaGCTAGTTCATCGATATCTG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWESEVGL*LVHRYL
Trigger: CAGATATCGATGAACTAGGCAAAGACCTACTTCTGA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACAAGATGGATACTTTaGCAACAAGGCAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTRWIL*QQGSVW
Trigger: CCACACACTGCCTTGTTGGCAAAGTATCCATCTTGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACAAGATGGATACTTTaGCAACAAGGCAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETRWIL*QQGSVW
Trigger: CCACACACTGCCTTGTTGGCAAAGTATCCATCTTGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACTGCCAACGATTGAATaGCAGAATGTTTGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWELPTIE*QNVCAL
Trigger: TAAAGCACAAACATTCTGGCATTCAATCGTTGGCAG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCATCAGAAGATAATCTaGCAACGATTGAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSHQKII*QRLNAR
Trigger: TCTGGCATTCAATCGTTGGCAGATTATCTTCTGATG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTCAGAGAGGCTGAGATaGCCTTTCATTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVESERLR*PFILCH
Trigger: ATGACACAGAATGAAAGGGCATCTCAGCCTCTCTGA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCTATCTGCTTCAAAATaGCCTAACGGCAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELSASK*PNGKTA
Trigger: AGCAGTCTTGCCGTTAGGGCATTTTGAAGCAGATAG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAACCTTGGGGCAATATaGCCTTTTCAGTTCACCACT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVENLGAI*PFQFTT
Trigger: AGTGGTGAACTGAAAAGGGCATATTGCCCCAAGGTT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACAGTATTTCAGCAGATaGTCGAAAAGAGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEQYFSR*SKRACI
Trigger: AATACAGGCTCTTTTCGAGCATCTGCTGAAATACTG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTACTGAGACTCATCTaGTTGCCACTCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELLRLI*LPLRRK
Trigger: TTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAGTAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTTCTTCCTAAGATTTaGAGAACAGATGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEFLPKI*RTDASE
Trigger: CTCAGAGGCATCTGTTCTGCAAATCTTAGGAAGAAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATATACAGGCAATCCTTaGTTTTTATTACCACACTGG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAYTGNP*FLLPHW
Trigger: CCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTATTTGTCCGCTGCTaGTCACCAGAATGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELFVRC*SPECSV
Trigger: CACAGAACATTCTGGTGACCAGCAGCGGACAAATAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAAACAGGTGGTGCATaGGAACAGCTTAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQTGGA*EQLKQS
Trigger: AGATTGCTTAAGCTGTTCCCATGCACCACCTGTTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTCAGAAAGCACAGGTaGCTAAACTTTCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSVRKHR*LNFPKD
Trigger: ATCTTTTGGAAAGTTTAGCCACCTGTGCTTTCTGAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACCACTGCTTAGCTTTTaGCAAAGATGTTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEPLLSF*QRCLKP
Trigger: TGGTTTCAAACATCTTTGCCAAAAGCTAAGCAGTGG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGGGACATTCTTGTACTaGTCCTACTATGAAATTCAA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAGTFLY*SYYEIQ
Trigger: TTGAATTTCATAGTAGGACCAGTACAAGAATGTCCC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAAGTATTGCTTCATGTaGTTGCCTCTTCCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEKYCFM*LPLPLK
Trigger: TTTCAAGGGAAGAGGCAACCACATGAAGCAATACTT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCCAGAAAAGAAATGCTaGGGACATGGGGTTAACTTT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEPEKKC*GHGVNF
Trigger: AAAGTTAACCCCATGTCCTCAGCATTTCTTTTCTGG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTCCATGTGAGACTTTaGGTAGACCTGACCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFFHVRL*VDLTLN
Trigger: ATTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTCAGTATGAATTACTaGGACTCATCTGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFSMNY*DSSACH
Trigger: GTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTCATTTTGGTTCAGTATaGATTACTGAGACTCATCTG +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSHFGSV*ITETHL
Trigger: CAGATGAGTCTCAGTAATTCATACTGAACCAAAATG...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATGCAACAAGCTTTTaGGGTGTTGGGAATTGTTGG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNATSF*GVGNCW
Trigger: CCAACAATTCCCAACACCTCAAAAGCTTGTTGCATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTACCACAGCCAAAACTaGATGCTCTGTACAATGACT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEYHSQN*MLCTMT
Trigger: AGTCATTGTACAGAGCATTCAGTTTTGGCTGTGGTA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAAGAGAAGCAACATCTaGTACAAAGTCACCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEKRSNI*YKVTCQ
Trigger: TTGGCAGGTGACTTTGTATCAGATGTTGCTTCTCTT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTTCTTCATAAGCACTaGCTAGAAATGAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAFLHKH*LEMSQK
Trigger: CTTTTGACTCATTTCTAGGCAGTGCTTATGAAGAAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAATTGGGTTGTGAATTaGATTGATATAGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFANWVVN*IDIERE
Trigger: CTCCCTTTCTATATCAATGCAATTCACAACCCAATT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTGTACACAGCTAAGTTaGCTGAAGCATGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVECTQLS*LKHGNL
Trigger: CAAGTTTCCATGCTTCAGGCAACTTAGCTGTGTACA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACATCATATCCTTTATaGTTTCAGTGGGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETSYPL*FQWALQ
Trigger: CTGGAGTGCCCACTGAAACCATAAAGGATATGATGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAACAAGGCAGTGTGTaGCAGAAAGTACAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQQGSV*QKVQCN
Trigger: ATTACACTGTACTTTCTGCCACACACTGCCTTGTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCACCGATGGAAGAACTaGGGACAGATTTTTACAAAG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEHRWKN*GQIFTK
Trigger: CTTTGTAAAAATCTGTCCCCAGTTCTTCCATCGGTG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGATAAGCTGCTTTCTGTaGTGCTGTGCTAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEISCFL*CCAKET
Trigger: AGTTTCCTTAGCACAGCACCACAGAAAGCAGCTTAT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTGCATGCAGCTTATTTaGGGGCTTAGTCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: NCVALCVLISATVIVLGSCMQLI*GLSLIF
Trigger: AAAAATTAGACTAAGCCCCCAAATAAGCTGCATGCA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTTTTATTACCACACTaGATTGCTTCTGTACACAGC +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEFLLPH*IASVHS
Trigger: GCTGTGTACAGAAGCAATCCAGTGTGGTAATAAAAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGGTGTTGGGAATTGTTaGTTGTTAAAATCCCTTTTA +
Preference number: 4 (lower is better)
Translates to: TPGRRTALENICDPVRFAGVGNC*LLKSLL
Trigger: TAAAAGGGATTTTAACAACCAACAATTCCCAACACC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTTTCATCTGCCTCTTaGGAAAGGAGCAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFFSSAS*ERSKSI
Trigger: AATGCTCTTGCTCCTTTCCCAAGAGGCAGATGAAAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGTACAGTGTAATAGATaGGGAAAATTTCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFVQCNR*GKFQGH
Trigger: GTGGCCTTGAAATTTTCCTCATCTATTACACTGTAC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACAGTGTGTGCTTCCTaGGAGAAAATCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETVCAS*EKIMRI
Trigger: TATTCTCATGATTTTCTCTCAGGAAGCACACACTGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACAGTGTGTGCTTCCTaGGAGAAAATCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTVCAS*EKIMRI
Trigger: TATTCTCATGATTTTCTCTCAGGAAGCACACACTGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGCTCAGATGAATCAGTaGAGTGAGTTTTTAAATTCA +
Preference number: 4 (lower is better)
Translates to: LRIYERFIESKQTGGAWEAQMNQ*SEFLNS
Trigger: TGAATTTAAAAACTCACTGCACTGATTCATCTGAGC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCAGTATTTCAGCAGATaGTCGAAAAGAGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEQYFSR*SKRACI
Trigger: AATACAGGCTCTTTTCGAGCATCTGCTGAAATACTG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGATTACCACACTGGATTaGTTCTGTACACAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEITTLD*FCTQLS
Trigger: ACTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAAT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGTCAGAAAGCACAGGTaGCTAAACTTTCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFVRKHR*LNFPKD
Trigger: ATCTTTTGGAAAGTTTAGCCACCTGTGCTTTCTGAC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTGCTTGTGTTGGATCTaGATTTCAGAAATGGCGAAT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVECLCWI*ISEMAN
Trigger: ATTCGCCATTTCTGAAATCCAGATCCAACACAAGCA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCAAGACTGCTTGTGTTaGATCTGGATTTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFQDCLC*IWISEM
Trigger: CATTTCTGAAATCCAGATCCAACACAAGCAGTCTTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAGAAGACTATTTTGGTaGATCACCTTCAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRRLFW*ITFSEQ
Trigger: TTGTTCACTGAAGGTGATTCACCAAAATAGTCTTCT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAAGGCAGAGATGGTATaGAATATAAAGGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEKAEMV*NIKDCR
Trigger: TCTACAGTCCTTTATATTTCATACCATCTCTGCCTT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCCATGGGATTTCTTATaGAAGCTAAATGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEPWDFL*KLNGQV
Trigger: AACTTGTCCATTTAGCTTTCATAAGAAATCCCATGG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR TCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTCACACAGCCTAGATaGGTATCTGATATACACAAT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFTQPR*VSDIHN
Trigger: ATTGTGTATATCAGATACTCATCTAGGCTGTGTGAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATATATTTCAGAAGTaGCGGGAGATAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNIFQK*REIDKM
Trigger: CATCTTGTCTATCTCCCGGCACTTCTGAAATATATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTTTCAGTTCACCACTaGTTAGCTTTTGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFSVHH*LAFGKD
Trigger: ATCTTTGCCAAAAGCTAAGCAGTGGTGAACTGAAAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGTTGTACTTATTTATaGACAGAAGACACCCGTTTG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFCCTYL*TEDTRL
Trigger: CAAACGGGTGTCTTCTGTGCATAAATAAGTACAACA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACACTAAAGTTAGTTTaGTTTCTCTGTCTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETLKLV*FLCLFV
Trigger: CACGAACAGACAGAGAAACCAAACTAACTTTAGTGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACACTAAAGTTAGTTTaGTTTCTCTGTCTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTLKLV*FLCLFV
Trigger: CACGAACAGACAGAGAAACCAAACTAACTTTAGTGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCGTTTTCTCATCAAGATaGATAGTACATTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFVFSSR*IVHSGE
Trigger: CTCTCCAGAATGTACTATCCATCTTGATGAGAAAAC...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTTCTTCATAAGCACTaGCTAGAAATGAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFLHKH*LEMSQK
Trigger: CTTTTGACTCATTTCTAGGCAGTGCTTATGAAGAAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCACAATATTTTAACTTaGTATGAGCTGCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFHNILT*YELLQC
Trigger: ACACTGAAGCAGCTCATAGCAAGTTAAAATATTGTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR GCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAATTGGGTTGTGAATTaGATTGATATAGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVENWVVN*IDIERE
Trigger: CTCCCTTTCTATATCAATGCAATTCACAACCCAATT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAATGGACATGATAAATaGTTTTGGGTAAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVENGHDK*FWVRFT
Trigger: TGTGAACCTTACCCAAAACCATTTATCATGTCCATT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAATTACCTGGTCTTTTaGTATTTTAGGGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVENYLVF*YFRALF
Trigger: AAACAGAGCCCTAAAATACCAAAAGACCAGGTAATT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CCA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAATTACCTGGTCTTTTaGTATTTTAGGGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNYLVF*YFRALF
Trigger: AAACAGAGCCCTAAAATACCAAAAGACCAGGTAATT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 90 bp CGCGGGGCTGGCGTAACCCTGGTGCCGCCGCCGCGAAACTCCGCCTaGAGAGTCGCCGCCGCCGCCGCCGCCGGAGGAGCGAGCCGATCC +
Preference number: 5 (lower is better)
Translates to: RGAGVTLVPPPRNSA*RVAAAAAAGGASRS
Trigger: GGATCGGCTCGCTCCTCCGGCGGCGGCGGCGGCGGCGACTCTGCAGGCGGAGTTTCGCGGCGGCGGCACCAGGGTTACGCCAGCCCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000491250.1
CDS GCA 90 bp CCAGGTGCCTCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATaGCCTCCTCGCCGGTCTGCACCCGCACGCGCTTCAACGCCACGA +
Preference number: 5 (lower is better)
Translates to: PGASAPPPRGWWRAA*PPRRSAPARASTPR
Trigger: TCGTGGCGTTGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp GCTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCTCGCCGGTCTGCACCCGCACGCGCT +
Preference number: 5 (lower is better)
Translates to: ARRSPGASAPPPRGW*RAACPPRRSAPARA
Trigger: AGCGCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp GGTGCTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCTCCTCGCCGGTCTGCACCCGCACGC +
Preference number: 5 (lower is better)
Translates to: GARRSPGASAPPPRG*WRAACPPRRSAPAR
Trigger: GCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 90 bp GCCACCTCGCGGATGGTGGAGAGCGGCATGCCCTCCTCGCCGGTCTaGACCCGCACGCGCTTCAACGCCACGAAACGGCCTCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATSRMVESGMPSSPV*TRTRFNATKRPPFF
Trigger: GAAGAACGGAGGCCGTTTCGTGGCGTTGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp CTTTCGCCGCTGCAGAAGCTGGATGGAGAGACCTCCCCGCGGGGCTaGCGTAACCCTGGTGCCGCCGCCGCGAAACTCCGCCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: LSPLQKLDGETSPRG*RNPGAAAAKLRLQS
Trigger: ACTCTGCAGGCGGAGTTTCGCGGCGGCGGCACCAGGGTTACGCCAGCCCCGCGGGGAGGTCTCTCCATCCAGCTTCTGCAGCGGCGAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000491250.1
CDS CCA 90 bp CGGTCTAGCTTTACTTGCTCCCCGCCGGCTCAGGCGCTCGGGCGCTaGGGCTTTCGCCGCTGCAGAAGCTGGATGGAGAGACCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: RSSFTCSPPAQALGR*GFRRCRSWMERPPR
Trigger: GCGGGGAGGTCTCTCCATCCAGCTTCTGCAGCGGCGAAAGCCCCAGCGCCCGAGCGCCTGAGCCGGCGGGGAGCAAGTAAAGCTAGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000491250.1
CDS TCA 90 bp GCTCGCCTTTTGCCAGGAATTAAACAAACGGCGCGACCCCCACGATaGGCGGGTGGAGCGGACCGCGGCGAGAGCAGAGCTTCTGGCACT +
Preference number: 5 (lower is better)
Translates to: ARLLPGIKQTARPPR*AGGADRGESRASGT
Trigger: AGTGCCAGAAGCTCTGCTCTCGCCGCGGTCCGCTCCACCCGCTCATCGTGGGGGTCGCGCCGTTTGTTTAATTCCTGGCAAAAGGCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS GCA 90 bp ACATCAAACAACCTGACCACGTTGGGGTGCTCGAAGGTCTCCAGGTaGCTCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATGCCC +
Preference number: 5 (lower is better)
Translates to: TSNNLTTLGCSKVSR*LSTATSRMVESGMP
Trigger: GGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTTTGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 90 bp CAGAATCATTGCACCTGCCTCGCAACCGCTGGCCCGCTCGCCTTTTaGCAGGAATTAAACAAACGGCGCGACCCCCACGATGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: QNHCTCLATAGPLAF*QELNKRRDPHDERV
Trigger: CACCCGCTCATCGTGGGGGTCGCGCCGTTTGTTTAATTCCTGGCAAAAGGCGAGCGGGCCAGCGGTTGCGAGGCAGGTGCAATGATTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGAGGTGTGGGGATGTaGGTCATCTTGGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGRGVGM*VILGWF
Trigger: GAACCAGCCCAAGATGACCAACATCCCCACACCTCT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp AGGCGGCTGCTGAGGCCTCAGGCTGTATTCAGCTCCGAGGTGTTCTaGCTGGGCGGCAGGTGGGAATCCAGGTTTTCTTTGCACCTTTCC +
Preference number: 5 (lower is better)
Translates to: RRLLRPQAVFSSEVF*LGGRWESRFSLHLS
Trigger: GGAAAGGTGCAAAGAAAACCTGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGGAGCTGAATACAGCCTGAGGCCTCAGCAGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS GCA 90 bp CCGAGGTGTTCTGGCTGGGCGGCAGGTGGGAATCCAGGTTTTCTTTaGACCTTTCCAGGTCCTGGAAGTATGGGTGAGACAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PRCSGWAAGGNPGFL*TFPGPGSMGETGHC
Trigger: ACAGTGCCCTGTCTCACCCATACTTCCAGGACCTGGAAAGGTGCAAAGAAAACCTGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCGTGACCCTGTTAGGTTaGCAGAATCGAGGCCATAAA +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGVTLLG*QNRGHK
Trigger: TTTATGGCCTCGATTCTGCAAACCTAACAGGGTCAC...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCCAGGTTCTTTGCACCTaGAGTTCCCATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGQVLCT*SSHPLQ
Trigger: TTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTG...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTTCCACACTGCTTCTaGGGTCTGCAGAACTCAAAG +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFPHCF*GLQNSK
Trigger: CTTTGAGTTCTGCAGACCCAAGAAGCAGTGTGGAAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 90 bp CTCCTCGAAGCGAAGTCCTCAACACAGACACGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCCAGAATCATTGCACCTGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LLEAKSSTQTRLHSL*PSASQSRIIAPEGP
Trigger: GGGCCCCTCAGGTGCAATGATTCTGGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCGTGTCTGTGTTGAGGACTTCGCTTCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTATTGCTTCATGTGGTaGCCTCTTCCCTTGAAATGG +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGYCFMW*PLPLKW
Trigger: CCATTTCAAGGGAAGAGGCAACCACATGAAGCAATA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAAGGACTTACATTTCTaGGCACACTTTGGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGKDLHF*AHFGSL
Trigger: GAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp CCTCAGGCTGTATTCAGCTCCGAGGTGTTCTGGCTGGGCGGCAGGTaGGAATCCAGGTTTTCTTTGCACCTTTCCAGGTCCTGGAAGTAT +
Preference number: 5 (lower is better)
Translates to: PQAVFSSEVFWLGGR*ESRFSLHLSRSWKY
Trigger: ATACTTCCAGGACCTGGAAAGGTGCAAAGAAAACCTGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGGAGCTGAATACAGCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS GCA 90 bp CTCCTCGAAGCGAAGTCCTCAACACAGACACGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCCAGAATCATTGCACCTGCCTCGCAA +
Preference number: 5 (lower is better)
Translates to: LLEAKSSTQTRLHSL*PSASQSRIIAPASQ
Trigger: TTGCGAGGCAGGTGCAATGATTCTGGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCGTGTCTGTGTTGAGGACTTCGCTTCGAGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTCTTTCTTCTTCTTTaGCTTCAAGAGGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFFLLL*LQEGFL
Trigger: CAGAAAGCCCTCTTGAAGCAAAAGAAGAAGAAAGAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAACACTAAAGTTAGTTaGGTTTCTCTGTCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGNTKVS*VSLSVR
Trigger: ACGAACAGACAGAGAAACCAAACTAACTTTAGTGTT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTTATGAAAGGTTCATaGAAAGCAAGCAAACAGGTG +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFMKGS*KASKQV
Trigger: CACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCATTTCTTGGCACACTTaGGTAGCCTCAATAAGTTTT +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGISWHT*VASISF
Trigger: AAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAAT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCAGACACACTCCTAAGTaGTTATGCTCATATACTTCA +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGRHTPK*LCSYTS
Trigger: TGAAGTATATGAGCATAACAACTTAGGAGTGTGTCT...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp GCAGGGCACTCTGACCTCGGAAAGCAGCCCGCGGGGCCGCACATAATTTCAGGCTTCTATACCAAACACTaGCCCTTTAACCTTCAGATA +
Preference number: 5 (lower is better)
Translates to: AGHSDLGKQPAGPHIISGFYTKH*PFNLQI
Trigger: TATCTGAAGGTTAAAGGGCAAGTGTTTGGTATAGAA...GCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp AGCCTGCCTGGGAAGGGCAACATCTCTAGGCCAGTCTTCTTCTCCTaGGAGTCCAATCACGCTACAAAAGAACCACACATGGACATAAGC +
Preference number: 5 (lower is better)
Translates to: SLPGKGNISRPVFFS*ESNHATKEPHMDIS
Trigger: GCTTATGTCCATGTGTGGTTCTTTTGTAGCGTGATTGGACTCCCAGGAGAAGAAGACTGGCCTAGAGATGTTGCCCTTCCCAGGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467166.1
CDS-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAAATGGCAGCACAATaGGTCAGCAGCTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQMAAQ*VSSFSS
Trigger: AGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCACCATGCTAGGGAATTaGAAAGCAGCAGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFTMLGN*KAAERV
Trigger: TACCCTCTCTGCTGCTTTCAAATTCCCTAGCATGGT...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAGGGATGTTGGTCATCTaGGGCTGGTTCACACAGCCT +
Preference number: 5 (lower is better)
Translates to: HLTRSGSLKAQADSSASTGMLVI*GWFTQP
Trigger: AGGCTGTGTGAACCAGCCCAAGATGACCAACATCCC...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 90 bp CTCCTCGAAGCGAAGTCCTCAACACAGACACGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCCAGAATCATTGCACTTTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LLEAKSSTQTRLHSL*PSASQSRIIALFFP
Trigger: GGGAAAGAAAAGTGCAATGATTCTGGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCGTGTCTGTGTTGAGGACTTCGCTTCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS CCA 90 bp GTGGGAATCCAGGTTTTCTTTGCACCTTTCCAGGTCCTGGAAGTATaGGTGAGACAGGGCACTGTAGGCAGATATTCTTTTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VGIQVFFAPFQVLEV*VRQGTVGRYSFGWV
Trigger: AACCCAGCCAAAAGAATATCTGCCTACAGTGCCCTGTCTCACCCATACTTCCAGGACCTGGAAAGGTGCAAAGAAAACCTGGATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAACAACCTGACCACGTaGGGGTGCTCGAAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFANNLTT*GCSKVS
Trigger: GGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACATGCTTCAGTGTAACCTaGGGGCAATATGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: HLTRSGSLKAQADSSASTCFSVT*GQYALF
Trigger: GAAAAGGGCATATTGCCCCAAGGTTACACTGAAGCA...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCCAAGGTAACAATATGTaGAAGGAAGTCCACTTCTAC +
Preference number: 5 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFQGNNM*KEVHFY
Trigger: GTAGAAGTGGACTTCCTTCAACATATTGTTACCTTG...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTGAGGTGTTGGGAATaGTTGGTTGTTAAAATCCCT +
Preference number: 5 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFLRCWE*LVVKIP
Trigger: AGGGATTTTAACAACCAACAATTCCCAACACCTCAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CCCACTACTCCACATGACACCTACGAGGGCACTACATCACGTGAGGGAAGCTTCTTCTTTCTTCTTCTTTaGCTTCAAGAGGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PTTPHDTYEGTTSREGSFFFLLL*LQEGFL
Trigger: CAGAAAGCCCTCTTGAAGCAAAAGAAGAAGAAAGAA...GAAGCTTCCCTCACGTGATGTAGTGCCCTCGTAGGTGTCATGTGGAGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCACTCAGGAGGAAAGTaGGGCAGGCACCGTCGAGTG +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFHSGGK*GRHRRV
Trigger: CACTCGACGGTGCCTGCCCAACTTTCCTCCTGAGTG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAACAGAAGACACCCGTTaGCTACTAGGGACATTTTTC +
Preference number: 5 (lower is better)
Translates to: HLTRSGSLKAQADSSASTTEDTR*LLGTFF
Trigger: GAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGGGATGTTGGTCATCTaGGGCTGGTTCACACAGCCT +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSGMLVI*GWFTQP
Trigger: AGGCTGTGTGAACCAGCCCAAGATGACCAACATCCC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAGAGGTGTGGGGATGTaGGTCATCTTGGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWERGVGM*VILGWF
Trigger: GAACCAGCCCAAGATGACCAACATCCCCACACCTCT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGAACAACCTGACCACGTaGGGGTGCTCGAAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVENNLTT*GCSKVS
Trigger: GGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTCAGCGAGTTTTATTaGTCCGCTGCTGGTCACCAG +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSVSEFY*SAAGHQ
Trigger: CTGGTGACCAGCAGCGGACAAATAAAACTCGCTGAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACTGAGACTCATCTGCTaGCCACTCAGGAGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFALRLIC*PLRRKV
Trigger: AACTTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCTCAGTCCAGAATCATaGCACCTGAGGGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELSPES*HLRGPV
Trigger: GACTGGGCCCCTCAGGTGCAATGATTCTGGACTGAG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTGGTTGGGCAGATTTaGAATGAAAAGCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFALVGQI*NEKPAW
Trigger: CCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACAGGTTCTTTGCACCTaGAGTTCCCATCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFAQVLCT*SSHPLQ
Trigger: TTGAAGTGGATGGGAACTCAAGGTGCAAAGAACCTG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATCCAAAACAGGTTCTTaGCACCTTGAGTTCCCATCC +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFASKTGS*HLEFPS
Trigger: GGATGGGAACTCAAGGTGCAAAGAACCTGTTTTGGA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAAATGCAACAAGCTTTaGAGGTGTTGGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: HLTRSGSLKAQADSSASTKCNKL*RCWELL
Trigger: CAACAATTCCCAACACCTCAAAAGCTTGTTGCATTT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCATTTCCACACTGCTTCTaGGGTCTGCAGAACTCAAAG +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFAFPHCF*GLQNSK
Trigger: CTTTGAGTTCTGCAGACCCAAGAAGCAGTGTGGAAA...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS TCA 90 bp TCGATATCTGTTACAAACTTCTCAATTGGTTGGGCAGATTTTGAATaGAAAGCCTGCCTGGGAAGGGCAACATCTCTAGGCCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SISVTNFSIGWADFE*KACLGRATSLGQSS
Trigger: AGAAGACTGGCCTAGAGATGTTGCCCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAATTGAGAAGTTTGTAACAGATATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACAAATGGCAGCACAATaGGTCAGCAGCTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWEQMAAQ*VSSFSS
Trigger: AGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGACAAGATGGATACTTaGCCAACAAGGCAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWEDKMDT*PTRQCV
Trigger: CACACACTGCCTTGTTGGCAAAGTATCCATCTTGTC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATCTGACACGTTCTGGAAGCCTCAAGGCACAAGCTGACAGTTCTGCTTCTACAAGTGTATGTGGCATTTaGGTTCAGTATGAATTACTG +
Preference number: 5 (lower is better)
Translates to: HLTRSGSLKAQADSSASTSVCGI*VQYELL
Trigger: CAGTAATTCATACTGAACCAAAATGCCACATACACT...TGTAGAAGCAGAACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp TGGTTTCAGTGGGCACTCCAGGCTCTGGAACTTTATCCAAGTAAGTaGTCAAGTCTTGATCGACATGTTCAAACACTAAAGTTAGTTTGG +
Preference number: 5 (lower is better)
Translates to: WFQWALQALELYPSK*SSLDRHVQTLKLVW
Trigger: CCAAACTAACTTTAGTGTTTGAACATGTCGATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCCACTGAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp CTGAAACATCATATCCTTTATGGTTTCAGTGGGCACTCCAGGCTCTaGAACTTTATCCAAGTAAGTGGTCAAGTCTTGATCGACATGTTC +
Preference number: 5 (lower is better)
Translates to: LKHHILYGFSGHSRL*NFIQVSGQVLIDMF
Trigger: GAACATGTCGATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCCACTGAAACCATAAAGGATATGATGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAACTCAGTCCAGAATCATaGCACTTTTCTTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWELSPES*HFSFPA
Trigger: TGCAGGGAAAGAAAAGTGCAATGATTCTGGACTGAG...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAGGTAATTTAGTTTGCTaGGGACAGCTTCTCCATAAC +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFAGNLVC*GQLLHN
Trigger: GTTATGGAGAAGCTGTCCCAAGCAAACTAAATTACC...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATATTGCTTCATGTGGTaGCCTCTTCCCTTGAAATGG +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWEYCFMW*PLPLKW
Trigger: CCATTTCAAGGGAAGAGGCAACCACATGAAGCAATA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCTGAGACTCATCTGCTaGCCACTCAGGAGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELRLIC*PLRRKV
Trigger: AACTTTCCTCCTGAGTGGCAAGCAGATGAGTCTCAG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTACAGAAGACACCCGTTaGCTACTAGGGACATTTTTC +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSTEDTR*LLGTFF
Trigger: GAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTGTAAGTGGTCAAGTCTaGATCGACATGTTCAAACAC +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSVSGQV*IDMFKH
Trigger: GTGTTTGAACATGTCGATCAAGACTTGACCACTTAC...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTGGTTGGGCAGATTTaGAATGAAAAGCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELVGQI*NEKPAW
Trigger: CCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTTCCATGTGAGACTTaGAGTAGACCTGACCTTGAA +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSFPCET*SRPDLE
Trigger: TTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAATAATCTGCCAACGATaGAATGCCAGAATGTTTGTG +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFAIICQR*NARMFV
Trigger: CACAAACATTCTGGCATTCAATCGTTGGCAGATTAT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTGCTTCAGTGTAACCTaGGGGCAATATGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFCFSVT*GQYALF
Trigger: GAAAAGGGCATATTGCCCCAAGGTTACACTGAAGCA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAGGTAATTTAGTTTGCTaGGGACAGCTTCTCCATAAC +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWEGNLVC*GQLLHN
Trigger: GTTATGGAGAAGCTGTCCCAAGCAAACTAAATTACC...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCAAAATGCAACAAGCTTTaGAGGTGTTGGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFAKCNKL*RCWELL
Trigger: CAACAATTCCCAACACCTCAAAAGCTTGTTGCATTT...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 90 bp AAGTGGTCAAGTCTTGATCGACATGTTCAAACACTAAAGTTAGTTTaGTTTCTCTGTCTGTTCGTGACACTGTGCACACATCAAACAACC +
Preference number: 5 (lower is better)
Translates to: KWSSLDRHVQTLKLV*FLCLFVTLCTHQTT
Trigger: GGTTGTTTGATGTGTGCACAGTGTCACGAACAGACAGAGAAACCAAACTAACTTTAGTGTTTGAACATGTCGATCAAGACTTGACCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTCAGAAGTAGGTCTTaGCCTAGTTCATCGATATCT +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWEFRSRS*PSSSIS
Trigger: AGATATCGATGAACTAGGCAAAGACCTACTTCTGAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTCAGAAGTAGGTCTTaGCCTAGTTCATCGATATCT +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSFRSRS*PSSSIS
Trigger: AGATATCGATGAACTAGGCAAAGACCTACTTCTGAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGCTAGCAGGGACATTCTaGTACTGGTCCTACTATGAA +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVELAGTF*YWSYYE
Trigger: TTCATAGTAGGACCAGTACAAGAATGTCCCTGCTAG...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp ACACCAGGTAGAAGGACTGCATTAGAGAACATATGTGACCCTGTTAGGTTTGCACGAACTTTCGGAGAATaGTGTTGTACTTATTTATGC +
Preference number: 5 (lower is better)
Translates to: TPGRRTALENICDPVRFARTFGE*CCTYLC
Trigger: GCATAAATAAGTACAACACAATTCTCCGAAAGTTCG...TGCAAACCTAACAGGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTGTACACAGCTAAGTaGCCTGAAGCATGGAAACTT +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLYTAK*PEAWKL
Trigger: AAGTTTCCATGCTTCAGGCAACTTAGCTGTGTACAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTGAGGTGTTGGGAATaGTTGGTTGTTAAAATCCCT +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWELRCWE*LVVKIP
Trigger: AGGGATTTTAACAACCAACAATTCCCAACACCTCAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGGTAAGTGGTCAAGTCTaGATCGACATGTTCAAACAC +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEVSGQV*IDMFKH
Trigger: GTGTTTGAACATGTCGATCAAGACTTGACCACTTAC...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTTCCATGTGAGACTTaGAGTAGACCTGACCTTGAA +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFFPCET*SRPDLE
Trigger: TTCAAGGTCAGGTCTACTCAAAGTCTCACATGGAAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTATTTCTTGGCACACTTaGGTAGCCTCAATAAGTTTT +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSISWHT*VASISF
Trigger: AAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAAT...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAAAGTGTATGTGGCATTTaGGTTCAGTATGAATTACTG +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWESVCGI*VQYELL
Trigger: CAGTAATTCATACTGAACCAAAATGCCACATACACT...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCACTTTCTGCCTTCAGTaGTACTTTCACAGGACTAGT +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFTFCLQ*YFHRTS
Trigger: ACTAGTCCTGTGAAAGTACAACTGAAGGCAGAAAGT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGACTTTCTGCCTTCAGTaGTACTTTCACAGGACTAGT +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVETFCLQ*YFHRTS
Trigger: ACTAGTCCTGTGAAAGTACAACTGAAGGCAGAAAGT...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTATTACCACACTGGATaGCTTCTGTACACAGCTAAG +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFYYHTG*LLYTAK
Trigger: CTTAGCTGTGTACAGAAGCAATCCAGTGTGGTAATA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CTGCGAATTTATGAAAGGTTCATTGAAAGCAAGCAAACAGGTGGTGCATGGGAATTATACAGGCAATCCTaGCTTTTTATTACCACACTG +
Preference number: 5 (lower is better)
Translates to: LRIYERFIESKQTGGAWELYRQS*LFITTL
Trigger: CAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATAA...TTCCCATGCACCACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp AATTGTGTGGCTCTATGTGTGCTGATTAGTGCTACAGTCATAGTTCTTGGCAGTTTATACAGGCAATCCTaGCTTTTTATTACCACACTG +
Preference number: 5 (lower is better)
Translates to: NCVALCVLISATVIVLGSLYRQS*LFITTL
Trigger: CAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATAA...ACTGCCAAGAACTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCAACACTAAAGTTAGTTaGGTTTCTCTGTCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFNTKVS*VSLSVR
Trigger: ACGAACAGACAGAGAAACCAAACTAACTTTAGTGTT...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp CATAAGCACTGCCTAGAAATGAGTCAAAAGCAGATGCTAGGAATAAAAGTTGAGTTTATGAAAGGTTCATaGAAAGCAAGCAAACAGGTG +
Preference number: 5 (lower is better)
Translates to: HKHCLEMSQKQMLGIKVEFMKGS*KASKQV
Trigger: CACCTGTTTGCTTGCTTTCAATGAACCTTTCATAAA...CTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGTGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCTAGCAAAAATGTCTTaGTATTTTGACCCTCGATCA +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFLAKMS*YFDPRS
Trigger: TGATCGAGGGTCAAAATACAAAGACATTTTTGCTAG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCCGAACTTTCGGAGAATaGTGTTGTACTTATTTATGC +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFRTFGE*CCTYLC
Trigger: GCATAAATAAGTACAACACAATTCTCCGAAAGTTCG...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS-3UTR CAA 90 bp TGTACTTATTTATGCACAGAAGACACCCGTTTGCTACTAGGGACATTTTTCTTCTTCTATACCAAACACTaGCCCTTTAACCTTCAGATA +
Preference number: 5 (lower is better)
Translates to: CTYLCTEDTRLLLGTFFFFYTKH*PFNLQI
Trigger: TATCTGAAGGTTAAAGGGCAAGTGTTTGGTATAGAA...GAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 72 bp ACTGCTGGTCAGCGCGGCACAGGCCGTCCTTCTCCATaGCGCCTGGACGCCGCCCGCCGCGGCGCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: TAGQRGTGRPSP*RLDAARRGAAG
Trigger: CCCAGCGGCGCCGCGGCGGGCGGCGTCCAGGCGGCATGGAGAAGGACGGCCTGTGCCGCGCTGACCAGCAGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 72 bp TCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATaGCCTCCTCGCCGGTCTGCACCCGCACGCGCTTCA +
Preference number: 6 (lower is better)
Translates to: SAPPPRGWWRAA*PPRRSAPARAS
Trigger: TGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp CTGCAGAAGCTGGATGGAGAGACCTCCCCGCGGGGCTaGCGTAACCCTGGTGCCGCCGCCGCGAAACTCCGC +
Preference number: 6 (lower is better)
Translates to: LQKLDGETSPRG*RNPGAAAAKLR
Trigger: GCGGAGTTTCGCGGCGGCGGCACCAGGGTTACGCCAGCCCCGCGGGGAGGTCTCTCCATCCAGCTTCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000491250.1
CDS CCA 72 bp TCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCTCGCCGGTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: SPGASAPPPRGW*RAACPPRRSAP
Trigger: GGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS GCA 72 bp CGGATGGTGGAGAGCGGCATGCCCTCCTCGCCGGTCTaGACCCGCACGCGCTTCAACGCCACGAAACGGCCT +
Preference number: 6 (lower is better)
Translates to: RMVESGMPSSPV*TRTRFNATKRP
Trigger: AGGCCGTTTCGTGGCGTTGAAGCGCGTGCGGGTGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp GCGCCCTCCCCGATCTCCGCCACGCATTCGTACTGCTaGTCAGCGCGGCACAGGCCGTCCTTCTCCATGCCG +
Preference number: 6 (lower is better)
Translates to: APSPISATHSYC*SARHRPSFSMP
Trigger: CGGCATGGAGAAGGACGGCCTGTGCCGCGCTGACCAGCAGTACGAATGCGTGGCGGAGATCGGGGAGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp AGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCTCCTCGCCGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: RSPGASAPPPRG*WRAACPPRRSA
Trigger: TGCAGACCGGCGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp TTTACTTGCTCCCCGCCGGCTCAGGCGCTCGGGCGCTaGGGCTTTCGCCGCTGCAGAAGCTGGATGGAGAGA +
Preference number: 6 (lower is better)
Translates to: FTCSPPAQALGR*GFRRCRSWMER
Trigger: TCTCTCCATCCAGCTTCTGCAGCGGCGAAAGCCCCAGCGCCCGAGCGCCTGAGCCGGCGGGGAGCAAGTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000491250.1
CDS GCA 72 bp AACCTGACCACGTTGGGGTGCTCGAAGGTCTCCAGGTaGCTCAGCACCGCCACCTCGCGGATGGTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: NLTTLGCSKVSR*LSTATSRMVES
Trigger: GCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS TCA 72 bp TTGCCAGGAATTAAACAAACGGCGCGACCCCCACGATaGGCGGGTGGAGCGGACCGCGGCGAGAGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LPGIKQTARPPR*AGGADRGESRA
Trigger: AGCTCTGCTCTCGCCGCGGTCCGCTCCACCCGCTCATCGTGGGGGTCGCGCCGTTTGTTTAATTCCTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS GCA 72 bp TGCACCTGCCTCGCAACCGCTGGCCCGCTCGCCTTTTaGCAGGAATTAAACAAACGGCGCGACCCCCACGAT +
Preference number: 6 (lower is better)
Translates to: CTCLATAGPLAF*QELNKRRDPHD
Trigger: ATCGTGGGGGTCGCGCCGTTTGTTTAATTCCTGGCAAAAGGCGAGCGGGCCAGCGGTTGCGAGGCAGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS CAA 72 bp TTGCACCTGCCTCGCAACCGCTGGCCCGCTCGCCTTTaGCCAGGAATTAAACAAACGGCGCGACCCCCACGA +
Preference number: 6 (lower is better)
Translates to: LHLPRNRWPARL*PGIKQTARPPR
Trigger: TCGTGGGGGTCGCGCCGTTTGTTTAATTCCTGGCAAAAGGCGAGCGGGCCAGCGGTTGCGAGGCAGGTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS GCA 72 bp ACTGTGCACACATCAAACAACCTGACCACGTTGGGGTaGTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACC +
Preference number: 6 (lower is better)
Translates to: TVHTSNNLTTLG*SKVSRCLSTAT
Trigger: GGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTTTGATGTGTGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp GGCCTCAGGCTGTATTCAGCTCCGAGGTGTTCTGGCTaGGCGGCAGGTGGGAATCCAGGTTTTCTTTGCACC +
Preference number: 6 (lower is better)
Translates to: GLRLYSAPRCSG*AAGGNPGFLCT
Trigger: GGTGCAAAGAAAACCTGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGGAGCTGAATACAGCCTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CCA 72 bp GTATTCAGCTCCGAGGTGTTCTGGCTGGGCGGCAGGTaGGAATCCAGGTTTTCTTTGCACCTTTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: VFSSEVFWLGGR*ESRFSLHLSRS
Trigger: GGACCTGGAAAGGTGCAAAGAAAACCTGGATTCCCACCTGCCGCCCAGCCAGAACACCTCGGAGCTGAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CCA 72 bp CTCAGTCCAGAATCATTGCACCTGCCTCGCAACCGCTaGCCCGCTCGCCTTTTGCCAGGAATTAAACAAACG +
Preference number: 6 (lower is better)
Translates to: LSPESLHLPRNR*PARLLPGIKQT
Trigger: CGTTTGTTTAATTCCTGGCAAAAGGCGAGCGGGCCAGCGGTTGCGAGGCAGGTGCAATGATTCTGGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491250.1
CDS GCA 72 bp GCGAAGTCCTCAACACAGACACGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCCAGAATCATTGCACCT +
Preference number: 6 (lower is better)
Translates to: AKSSTQTRLHSL*PSASQSRIIAP
Trigger: AGGTGCAATGATTCTGGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCGTGTCTGTGTTGAGGACTTCGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424848.3
ENST00000491250.1
CDS TCA 72 bp CAAGTGGTAGCCTGGGGTAGATGGATCTGGCCATCATaGCCCCTAATGATAGAAATGCCATGCTGCCACTCA +
Preference number: 6 (lower is better)
Translates to: QVVAWGRWIWPS*PLMIEMPCCHS
Trigger: TGAGTGGCAGCATGGCATTTCTATCATTAGGGGTCATGATGGCCAGATCCATCTACCCCAGGCTACCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473078.1
CDS GCA 72 bp GCGAAGTCCTCAACACAGACACGATTACATAGCCTCTaGCCAAGCGCGTCTCAGTCCAGAATCATTGCACTT +
Preference number: 6 (lower is better)
Translates to: AKSSTQTRLHSL*PSASQSRIIAL
Trigger: AAGTGCAATGATTCTGGACTGAGACGCGCTTGGGCAGAGGCTATGTAATCGTGTCTGTGTTGAGGACTTCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265734.8
CDS CCA 72 bp GGGAAGGGCAACATCTCTAGGCCAGTCTTCTTCTCCTaGGAGTCCAATCACGCTACAAAAGAACCACACATG +
Preference number: 6 (lower is better)
Translates to: GKGNISRPVFFS*ESNHATKEPHM
Trigger: CATGTGTGGTTCTTTTGTAGCGTGATTGGACTCCCAGGAGAAGAAGACTGGCCTAGAGATGTTGCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467166.1
CDS GCA 72 bp CGACCACTGAGGTTAGAGCCATCTGGAAACTATAGATaGGGGCAAGGCCGAAGTCAGCGAGTTTTATTTGTC +
Preference number: 6 (lower is better)
Translates to: RPLRLEPSGNYR*GQGRSQRVLFV
Trigger: GACAAATAAAACTCGCTGACTTCGGCCTTGCCCGCATCTATAGTTTCCAGATGGCTCTAACCTCAGTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000473078.1
CDS TCA 72 bp GTTACAAACTTCTCAATTGGTTGGGCAGATTTTGAATaGAAAGCCTGCCTGGGAAGGGCAACATCTCTAGGC +
Preference number: 6 (lower is better)
Translates to: VTNFSIGWADFE*KACLGRATSLG
Trigger: GCCTAGAGATGTTGCCCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAATTGAGAAGTTTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CCA 72 bp TGGGCACTCCAGGCTCTGGAACTTTATCCAAGTAAGTaGTCAAGTCTTGATCGACATGTTCAAACACTAAAG +
Preference number: 6 (lower is better)
Translates to: WALQALELYPSK*SSLDRHVQTLK
Trigger: CTTTAGTGTTTGAACATGTCGATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp CATATCCTTTATGGTTTCAGTGGGCACTCCAGGCTCTaGAACTTTATCCAAGTAAGTGGTCAAGTCTTGATC +
Preference number: 6 (lower is better)
Translates to: HILYGFSGHSRL*NFIQVSGQVLI
Trigger: GATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCCACTGAAACCATAAAGGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CCA 72 bp GGAGAAGCTGAAACATCATATCCTTTATGGTTTCAGTaGGCACTCCAGGCTCTGGAACTTTATCCAAGTAAG +
Preference number: 6 (lower is better)
Translates to: GEAETSYPLWFQ*ALQALELYPSK
Trigger: CTTACTTGGATAAAGTTCCAGAGCCTGGAGTGCCCACTGAAACCATAAAGGATATGATGTTTCAGCTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CAA 90 bp GTAGGTCTTTGCCTAGTTCATCGATATCTGTTACAAACTTCTCAATaGGTTGGGCAGATTTTGAATGAAAAGCCTGCCTGGGAAGGGCAA +
Preference number: 6 (lower is better)
Translates to: VGLCLVHRYLLQTSQ*VGQILNEKPAWEGQ
Trigger: TTGCCCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAATTGAGAAGTTTGTAACAGATATCGATGAACTAGGCAAAGACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CAA 72 bp TATCTGTTACAAACTTCTCAATTGGTTGGGCAGATTTaGAATGAAAAGCCTGCCTGGGAAGGGCAACATCTC +
Preference number: 6 (lower is better)
Translates to: YLLQTSQLVGQI*NEKPAWEGQHL
Trigger: GAGATGTTGCCCTTCCCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAATTGAGAAGTTTGTAACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CAA 72 bp TGCCTAGTTCATCGATATCTGTTACAAACTTCTCAATaGGTTGGGCAGATTTTGAATGAAAAGCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: CLVHRYLLQTSQ*VGQILNEKPAW
Trigger: CCAGGCAGGCTTTTCATTCAAAATCTGCCCAACCAATTGAGAAGTTTGTAACAGATATCGATGAACTAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1
CDS CCA 72 bp AGTCTTGATCGACATGTTCAAACACTAAAGTTAGTTTaGTTTCTCTGTCTGTTCGTGACACTGTGCACACAT +
Preference number: 6 (lower is better)
Translates to: SLDRHVQTLKLV*FLCLFVTLCTH
Trigger: ATGTGTGCACAGTGTCACGAACAGACAGAGAAACCAAACTAACTTTAGTGTTTGAACATGTCGATCAAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265734.8
ENST00000424848.3
CDS CAA 72 bp GCTGGGTTAAATGTCAAACACTTCAGAAGTAGGTCTTaGCCTAGTTCATCGATATCTGTTACAAACTTCTCA +
Preference number: 6 (lower is better)
Translates to: AGLNVKHFRSRS*PSSSISVTNFS
Trigger: TGAGAAGTTTGTAACAGATATCGATGAACTAGGCAAAGACCTACTTCTGAAGTGTTTGACATTTAACCCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265734.8
ENST00000424848.3
ENST00000467166.1