Pregenerated sensors for CDK5RAP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000108465Ensembl transcript IDs: ENST00000536708.6, ENST00000577442.5, ENST00000578018.5, ENST00000578134.5, ENST00000578733.5, ENST00000579605.5, ENST00000579632.5, ENST00000579780.5, ENST00000579853.5, ENST00000580287.5, ENST00000580391.5, ENST00000581160.5, ENST00000581662.1, ENST00000582275.5, ENST00000582482.1, ENST00000583182.5, ENST00000583352.5, ENST00000583363.5, ENST00000584042.1, ENST00000584063.5, ENST00000584168.5, ENST00000584186.1, ENST00000584525.5, ENST00000585163.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTaGACCTCCTCCTTCCCCCAGCACTCCACTCAGGGAAAATCAATT | + |
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Preference number: 1 (lower is better) Translates to: AICCSLRHGEWPLPA*TSSFPQHSTQGKSI Trigger: AATTGATTTTCCCTGAGTGGAGTGCTGGGGGAAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| 3UTR CCA 72 bp | CACTTGGCAATCTGCTGCTCGCTGAGGCACGGCGAATaGCCACTACCGGCCTGGACCTCCTCCTTCCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: HLAICCSLRHGE*PLPAWTSSFPQ Trigger: CTGGGGGAAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGCCAAGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR CCA 90 bp | CTGGCACTTGGCAATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCTCAGGCTGGAGACTGTaGCCCGCCCCGCCCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: LALGNLLLAEARRMATTGSGWRL*PAPPYH Trigger: GTGGTAGGGCGGGGCGGGCCACAGTCTCCAGCCTGA...GCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGCCAAGTGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTGGACCTCCTCCTTCAATCTGCTGCTCGCTaGGGCACGGCGAATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLLAEARRMATTGLDLLLQSAAR*GTANGH Trigger: GTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTG...AAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR CCA 90 bp | TGGCACTTGGCAATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCACTTCCGCTTCAGGCTaGAGACTGTGGCCCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WHLAICCSLRHGEWPLPATSASG*RLWPAP Trigger: CGGGGCGGGCCACAGTCTCCAGCCTGAAGCGGAAGT...GGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGCCAAGTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR CCA 90 bp | AATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTGGACCTCCTCCTGAGGCACGGCGAATaGCCACTACCGGCCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: NLLLAEARRMATTGLDLLLRHGE*PLPAWT Trigger: GGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAG...GAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR TCA 90 bp | AATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTGGACCTCCTCTCGATGGGCACGTGCTaGTGGTCCTCCATCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: NLLLAEARRMATTGLDLLSMGTC*WSSIFP Trigger: AGGAAAGATGGAGGACCATCAGCACGTGCCCATCGA...GAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR TCA 90 bp | CTGGCACTTGGCAATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCATCCTTCATCCGCTGTaGAGAGTATCGGCCAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LALGNLLLAEARRMATTGILHPL*RVSAKN Trigger: ATTTTTGGCCGATACTCTTCACAGCGGATGAAGGAT...GCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGCCAAGTGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS-3UTR GCA 90 bp | TGGCACTTGGCAATCTGCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCAGAGCTATAATCTCCTaGCAATCCTTCATCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WHLAICCSLRHGEWPLPARAIIS*QSFIRC Trigger: ACAGCGGATGAAGGATTGGCAGGAGATTATAGCTCT...GGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGCAGATTGCCAAGTGCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579605.5 |
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| CDS GCA 90 bp | GGACGTACCACTCGCGCGCTCATTTCAACGTCCCAACCACCACCCTaGAGGGCCAGAACGGGGCCAGAGCGATGGGCTGGGTTGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GRTTRALISTSQPPP*RARTGPERWAGLSR Trigger: GCGGCTCAACCCAGCCCATCGCTCTGGCCCCGTTCTGGCCCTGCAGGGTGGTGGTTGGGACGTTGAAATGAGCGCGCGAGTGGTACGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000578018.5 ENST00000578134.5 ENST00000578733.5 ENST00000580391.5 ENST00000583352.5 ENST00000584042.1 |
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| CDS GCA 90 bp | CAGCCAATCACTCGCGCGCTCATTTCAACGTCCCAACCACCACCCTaGAGGGCCAGAACGGGGCCAGAGCGATGGGCTGGGTTGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: QPITRALISTSQPPP*RARTGPERWAGLSR Trigger: GCGGCTCAACCCAGCCCATCGCTCTGGCCCCGTTCTGGCCCTGCAGGGTGGTGGTTGGGACGTTGAAATGAGCGCGCGAGTGATTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579780.5 ENST00000583363.5 ENST00000584186.1 |
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| CDS CCA 90 bp | GGAGACTGTGGCCCGCCCCGCCCTACCACCAATCCAGTGGCGTTGTaGCCGAGCCTCCGTTTAGACACAAACGGGCATCCTTCGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: GDCGPPRPTTNPVAL*PSLRLDTNGHPSAT Trigger: CGTGGCCGAAGGATGCCCGTTTGTGTCTAAACGGAGGCTCGGCCACAACGCCACTGGATTGGTGGTAGGGCGGGGCGGGCCACAGTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577442.5 ENST00000579853.5 |
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| CDS CCA 90 bp | AGTGGTGGAGGACCCACACACACCTGCTCGCTGAGGCACGGCGAATaGCCACTACCGGCCTGGACCTCCTCCTTCCCCCAGCACTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SGGGPTHTCSLRHGE*PLPAWTSSFPQHST Trigger: AGTGGAGTGCTGGGGGAAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGGTGTGTGTGGGTCCTCCACCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS GCA 90 bp | ACTCCCGCTAACCAAGAGGTGAGTGGTGGAGGACCCACACACACCTaGTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTGGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: TPANQEVSGGGPTHT*SLRHGEWPLPAWTS Trigger: GGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGGTGTGTGTGGGTCCTCCACCACTCACCTCTTGGTTAGCGGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS CCA 90 bp | TCCCCACCAGCTCTCTCTCCTCAGCCACACCAGCCTCCATGTTGCTaGTCAACTGTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: SPPALSPQPHQPPCC*STVQGLLPPRDLCT Trigger: AGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGTGTGGCTGAGGAGAGAGAGCTGGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS TCA 90 bp | CCACTCACAGACTGTGCCTCCTATAAGCCTGGTATCTCAGAACTCTaGGAGTGGGCTTCCCCATGGATACCAGGGCTCCCAGGCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PLTDCASYKPGISEL*EWASPWIPGLPGRA Trigger: GGCCCGGCCTGGGAGCCCTGGTATCCATGGGGAAGCCCACTCTCAGAGTTCTGAGATACCAGGCTTATAGGAGGCACAGTCTGTGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000577442.5 ENST00000579780.5 ENST00000580287.5 ENST00000581662.1 ENST00000583182.5 ENST00000584042.1 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS GCA 90 bp | GTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACTTGCTCTCTCTaGCTGGGAAGCCCTTCTGCCAGACATCTGCATGGTTCTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VQGLLPPRDLCTCSL*LGSPSARHLHGSLC Trigger: GCAGAGAGAACCATGCAGATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 90 bp | ACACACACCTGCTCGCTGAGGCACGGCGAATGGCCACTACCGGCCTaGACCTCCTCCTTCCCCCAGCACTCCACTCAGGGAAAATCAATT | + |
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Preference number: 5 (lower is better) Translates to: THTCSLRHGEWPLPA*TSSFPQHSTQGKSI Trigger: AATTGATTTTCCCTGAGTGGAGTGCTGGGGGAAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGGTGTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS CCA 90 bp | CAACTGACTCTCCTGCCGACCATGCGTAAGGCCAACACTGGGCTTTaGCCTGGGCCACATGGTCAAATGGGCAAGGCCCCCACAGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QLTLLPTMRKANTGL*PGPHGQMGKAPTGS Trigger: TGAACCTGTGGGGGCCTTGCCCATTTGACCATGTGGCCCAGGCCAAAGCCCAGTGTTGGCCTTACGCATGGTCGGCAGGAGAGTCAGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS CCA 90 bp | CCCCTTGAGGCTGGGAGGAGCCTCTGGGCAGAAAGAGGAGAGAACTaGGTGAGGACAGAACTTTCAGGAGGCTCTCCGAACCAGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PLEAGRSLWAERGEN*VRTELSGGSPNQQA Trigger: AGCCTGCTGGTTCGGAGAGCCTCCTGAAAGTTCTGTCCTCACCCAGTTCTCTCCTCTTTCTGCCCAGAGGCTCCTCCCAGCCTCAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS GCA 90 bp | TGGTCAACTGTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACTTaGTCTCTCTGCCTGGGAAGCCCTTCTGCCAGACATCTGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: WSTVQGLLPPRDLCT*SLCLGSPSARHLHG Trigger: ACCATGCAGATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 90 bp | CCACTGGAGCCTCAGAGAGACCACAGAGGCTATGACTCCTCGGATTaGATGTCCCCAACCACATACTACCGGCCCTTGGCCCACACTTGC | + |
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Preference number: 5 (lower is better) Translates to: PLEPQRDHRGYDSSD*MSPTTYYRPLAHTC Trigger: GCAAGTGTGGGCCAAGGGCCGGTAGTATGTGGTTGGGGACATCCAATCCGAGGAGTCATAGCCTCTGTGGTCTCTCTGAGGCTCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584525.5 |
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| CDS TCA 90 bp | ATGAGGCAGGCATGCCCCAGGATGCACACACATCCTTTGTGGTGGTaGAGAGCACGAAGTCAGCTTCCCAGCCCCACTTGTTCCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: MRQACPRMHTHPLWW*RARSQLPSPTCSQL Trigger: CAGCTGGGAACAAGTGGGGCTGGGAAGCTGACTTCGTGCTCTTCACCACCACAAAGGATGTGTGTGCATCCTGGGGCATGCCTGCCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS TCA 90 bp | TCCACTGAGAAGTGCCCAGGAAATTCAGCCCAGGACACCCCCACATaGGGCAGGCATGCCCCAGGATGCACACACATCCTTTGTGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: STEKCPGNSAQDTPT*GRHAPGCTHILCGG Trigger: ACCACCACAAAGGATGTGTGTGCATCCTGGGGCATGCCTGCCTCATGTGGGGGTGTCCTGGGCTGAATTTCCTGGGCACTTCTCAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS TCA 90 bp | GCACGTGGAGCAGAAGGATGTTTGAGAACAGTTCTGCCCAGCTACTaGCTCCAGGGAGGCTGTCCCAAAGCCAGAGGCTCTGGGAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: ARGAEGCLRTVLPSY*LQGGCPKARGSGRE Trigger: TTCTCTCCCAGAGCCTCTGGCTTTGGGACAGCCTCCCTGGAGTCAGTAGCTGGGCAGAACTGTTCTCAAACATCCTTCTGCTCCACGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579632.5 |
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| CDS TCA 90 bp | GTAGCTCAGCTGATACATACTACCTCAGCAAAGAGGGGACTCCAGTaGCAGCCCCTAAGCACTCACAGGACCCAGACAGCAGCTGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: VAQLIHTTSAKRGLQ*QPLSTHRTQTAAGR Trigger: TCGCCCAGCTGCTGTCTGGGTCCTGTGAGTGCTTAGGGGCTGTCACTGGAGTCCCCTCTTTGCTGAGGTAGTATGTATCAGCTGAGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000584186.1 |
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| CDS TCA 90 bp | GCAGTGAAAGTAGTGAATGTTACCTCAGCAAAGAGGGGACTCCAGTaGCAGCCCCTAAGCACTCACAGGACCCAGACAGCAGCTGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: AVKVVNVTSAKRGLQ*QPLSTHRTQTAAGR Trigger: TCGCCCAGCTGCTGTCTGGGTCCTGTGAGTGCTTAGGGGCTGTCACTGGAGTCCCCTCTTTGCTGAGGTAACATTCACTACTTTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577442.5 ENST00000581160.5 ENST00000583352.5 ENST00000584042.1 |
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| CDS TCA 90 bp | TATGTAGGCATCCCCACTGGAGCCTCAGAGAGACCACAGAGGCTATaGCTCCTCGGATTGGATGTCCCCAACCACATACTACCGGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: YVGIPTGASERPQRL*LLGLDVPNHILPAL Trigger: AAGGGCCGGTAGTATGTGGTTGGGGACATCCAATCCGAGGAGTCATAGCCTCTGTGGTCTCTCTGAGGCTCCAGTGGGGATGCCTACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584525.5 |
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| CDS TCA 90 bp | TCCCAGTTCACTCAGAGGCAAACCAAGGTTCAGACGCTACATCTCTaGGCTCTTCTACTCCCCACCAGCTCTCTCTCCTCAGCCACACCA | + |
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Preference number: 5 (lower is better) Translates to: SQFTQRQTKVQTLHL*ALLLPTSSLSSATP Trigger: TGGTGTGGCTGAGGAGAGAGAGCTGGTGGGGAGTAGAAGAGCTCAGAGATGTAGCGTCTGAACCTTGGTTTGCCTCTGAGTGAACTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 90 bp | TGCGTAAGGCCAACACTGGGCTTTGGCCTGGGCCACATGGTCAAATaGGCAAGGCCCCCACAGGTTCAGGTGTGTAAAGAGTTCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: CVRPTLGFGLGHMVK*ARPPQVQVCKEFKC Trigger: ACATTTGAACTCTTTACACACCTGAACCTGTGGGGGCCTTGCCCATTTGACCATGTGGCCCAGGCCAAAGCCCAGTGTTGGCCTTACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS CCA 90 bp | TCATGGAACAAGAGGAGGAATACAAGGAGGCAGAGCTGCTCAAGATaGCAGAGCCTTGCATCAAGGGGAAGCCAGACCTTGGTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SWNKRRNTRRQSCSR*QSLASRGSQTLVRP Trigger: TGGCCTCACCAAGGTCTGGCTTCCCCTTGATGCAAGGCTCTGCCATCTTGAGCAGCTCTGCCTCCTTGTATTCCTCCTCTTGTTCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 90 bp | TCAAATGTTATATGGGAACAAGACAACTGGAGAAGGGTCATGAGCTaGGGAACACAGGCAAAGCACCCCCACCAGGAGAAGCTGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SNVIWEQDNWRRVMS*GTQAKHPHQEKLRP Trigger: AGGCCTCAGCTTCTCCTGGTGGGGGTGCTTTGCCTGTGTTCCCCAGCTCATGACCCTTCTCCAGTTGTCTTGTTCCCATATAACATTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS TCA 90 bp | TTGTCATGCTTTGCCTCCTCATTCAGTTTCTCTAATAGACATGGTTaGGCACCTGCAACGTGTTGGGCGATTAGGGCAGGGAAGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LSCFASSFSFSNRHG*APATCWAIRAGKGK Trigger: CTTCCCCTTCCCTGCCCTAATCGCCCAACACGTTGCAGGTGCTCAACCATGTCTATTAGAGAAACTGAATGAGGAGGCAAAGCATGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536708.6 |
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| CDS CCA 90 bp | CAAGGCCCCCACAGGTTCAGGTGTGTAAAGAGTTCAAATGTTATATaGGAACAAGACAACTGGAGAAGGGTCATGAGCTGGGGAACACAG | + |
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Preference number: 5 (lower is better) Translates to: QGPHRFRCVKSSNVI*EQDNWRRVMSWGTQ Trigger: CTGTGTTCCCCAGCTCATGACCCTTCTCCAGTTGTCTTGTTCCCATATAACATTTGAACTCTTTACACACCTGAACCTGTGGGGGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS CCA 90 bp | TATACCTCAAATAAAAATCGCTCCCTCTCTAAAGGCCAGCCCTGGTaGCTAAATAACAAGAGAGTAGCTCAGCTGATACATACTACCTCA | + |
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Preference number: 5 (lower is better) Translates to: YTSNKNRSLSKGQPW*LNNKRVAQLIHTTS Trigger: TGAGGTAGTATGTATCAGCTGAGCTACTCTCTTGTTATTTAGCCACCAGGGCTGGCCTTTAGAGAGGGAGCGATTTTTATTTGAGGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000581662.1 ENST00000584186.1 |
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| CDS CCA 90 bp | ATCTATACCTCAAATAAAAATCGCTCCCTCTCTAAAGGCCAGCCCTaGTGGCTAAATAACAAGAGAGTAGCTCAGCTGATACATACTACC | + |
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Preference number: 5 (lower is better) Translates to: IYTSNKNRSLSKGQP*WLNNKRVAQLIHTT Trigger: GGTAGTATGTATCAGCTGAGCTACTCTCTTGTTATTTAGCCACCAGGGCTGGCCTTTAGAGAGGGAGCGATTTTTATTTGAGGTATAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000581662.1 ENST00000584186.1 |
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| CDS TCA 90 bp | TCTCTCTGCCCAGGGAAGGTATTTATTTTGTCTCCATGGGAGGAATaGGATTCAGGGAACAGAAATACATGTTTGAGAAGCACTGGATTA | + |
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Preference number: 5 (lower is better) Translates to: SLCPGKVFILSPWEE*DSGNRNTCLRSTGL Trigger: TAATCCAGTGCTTCTCAAACATGTATTTCTGTTCCCTGAATCTCATTCCTCCCATGGAGACAAAATAAATACCTTCCCTGGGCAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS TCA 90 bp | AGAACTAAAGTATCTTCTTCACCTACTCTGGGCACTGCAGGTGGCTaGTTCATGTATAATATACTGCCAGTAACTTTAGTGTGTAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RTKVSSSPTLGTAGG*FMYNILPVTLVCSF Trigger: AAAGCTACACACTAAAGTTACTGGCAGTATATTATACATGAATCAGCCACCTGCAGTGCCCAGAGTAGGTGAAGAAGATACTTTAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579853.5 ENST00000581662.1 |
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| CDS CCA 72 bp | GGACCCACACACACCTGCTCGCTGAGGCACGGCGAATaGCCACTACCGGCCTGGACCTCCTCCTTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPTHTCSLRHGE*PLPAWTSSFPQ Trigger: CTGGGGGAAGGAGGAGGTCCAGGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGGTGTGTGTGGGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS CAA 90 bp | GCTGGAGACTGTGGCCCGCCCCGCCCTACCACCAATCCAGTGGCGTaGTGGCCGAGCCTCCGTTTAGACACAAACGGGCATCCTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: AGDCGPPRPTTNPVA*WPSLRLDTNGHPSA Trigger: GGCCGAAGGATGCCCGTTTGTGTCTAAACGGAGGCTCGGCCACAACGCCACTGGATTGGTGGTAGGGCGGGGCGGGCCACAGTCTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577442.5 ENST00000579853.5 |
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| CDS CCA 72 bp | GGCCCGCCCCGCCCTACCACCAATCCAGTGGCGTTGTaGCCGAGCCTCCGTTTAGACACAAACGGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: GPPRPTTNPVAL*PSLRLDTNGHP Trigger: AGGATGCCCGTTTGTGTCTAAACGGAGGCTCGGCCACAACGCCACTGGATTGGTGGTAGGGCGGGGCGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577442.5 ENST00000579853.5 |
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| CDS GCA 72 bp | AACCAAGAGGTGAGTGGTGGAGGACCCACACACACCTaGTCGCTGAGGCACGGCGAATGGCCACTACCGGCC | + |
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Preference number: 6 (lower is better) Translates to: NQEVSGGGPTHT*SLRHGEWPLPA Trigger: GGCCGGTAGTGGCCATTCGCCGTGCCTCAGCGAGCAGGTGTGTGTGGGTCCTCCACCACTCACCTCTTGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS CAA 72 bp | TGTGGCCCGCCCCGCCCTACCACCAATCCAGTGGCGTaGTGGCCGAGCCTCCGTTTAGACACAAACGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: CGPPRPTTNPVA*WPSLRLDTNGH Trigger: ATGCCCGTTTGTGTCTAAACGGAGGCTCGGCCACAACGCCACTGGATTGGTGGTAGGGCGGGGCGGGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577442.5 ENST00000579853.5 |
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| CDS TCA 72 bp | TGCATCCTGAGCATTCCCATTCAGCTGCTGGGGAGGTaGGAGGCTCGGGAAACCAAACCCCCAACTGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CILSIPIQLLGR*EARETKPPTGR Trigger: GCGGCCAGTTGGGGGTTTGGTTTCCCGAGCCTCTCACCTCCCCAGCAGCTGAATGGGAATGCTCAGGATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS GCA 72 bp | GTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACTTaGTCTCTCTGCCTGGGAAGCCCTTCTGCCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: VQGLLPPRDLCT*SLCLGSPSARH Trigger: ATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS GCA 72 bp | CCAGCTCTCTCTCCTCAGCCACACCAGCCTCCATGTTaGTGGTCAACTGTGCAAGGTCTGCTCCCACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PALSPQPHQPPC*WSTVQGLLPPR Trigger: CCGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGTGTGGCTGAGGAGAGAGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | GCTCTCTCTCCTCAGCCACACCAGCCTCCATGTTGCTaGTCAACTGTGCAAGGTCTGCTCCCACCTCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ALSPQPHQPPCC*STVQGLLPPRD Trigger: GTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGTGTGGCTGAGGAGAGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CAA 72 bp | TGTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACTaGCTCTCTCTGCCTGGGAAGCCCTTCTGCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: CARSAPTSGPLH*LSLPGKPFCQT Trigger: TGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CAA 90 bp | CTGGTCAACTGTGCAAGGTCTGCTCCCACCTCGGGACCTCTGCACTaGCTCTCTCTGCCTGGGAAGCCCTTCTGCCAGACATCTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: LVNCARSAPTSGPLH*LSLPGKPFCQTSAW Trigger: CCATGCAGATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS GCA 72 bp | CTCAGCCACACCAGCCTCCATGTTGCTGGTCAACTGTaGAAGGTCTGCTCCCACCTCGGGACCTCTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: LSHTSLHVAGQL*KVCSHLGTSAL Trigger: AAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGTGTGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | TCCCACCTCGGGACCTCTGCACTTGCTCTCTCTGCCTaGGAAGCCCTTCTGCCAGACATCTGCATGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHLGTSALALSA*EALLPDICMVL Trigger: GAGAACCATGCAGATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CAA 72 bp | ACCAGCTCTCTCTCCTCAGCCACACCAGCCTCCATGTaGCTGGTCAACTGTGCAAGGTCTGCTCCCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: TSSLSSATPASM*LVNCARSAPTS Trigger: CGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGTGTGGCTGAGGAGAGAGAGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS GCA 72 bp | ACCAGCCTCCATGTTGCTGGTCAACTGTGCAAGGTCTaGTCCCACCTCGGGACCTCTGCACTTGCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSLHVAGQLCKV*SHLGTSALALS Trigger: AGAGAGAGCAAGTGCAGAGGTCCCGAGGTGGGAGCAGACCTTGCACAGTTGACCAGCAACATGGAGGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | CCAACACTGGGCTTTGGCCTGGGCCACATGGTCAAATaGGCAAGGCCCCCACAGGTTCAGGTGTGTAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PTLGFGLGHMVK*ARPPQVQVCKE Trigger: CTCTTTACACACCTGAACCTGTGGGGGCCTTGCCCATTTGACCATGTGGCCCAGGCCAAAGCCCAGTGTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS CCA 72 bp | CCTCAGAGAGACCACAGAGGCTATGACTCCTCGGATTaGATGTCCCCAACCACATACTACCGGCCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PQRDHRGYDSSD*MSPTTYYRPLA Trigger: GGCCAAGGGCCGGTAGTATGTGGTTGGGGACATCCAATCCGAGGAGTCATAGCCTCTGTGGTCTCTCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584525.5 |
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| CDS TCA 72 bp | GCATGCCCCAGGATGCACACACATCCTTTGTGGTGGTaGAGAGCACGAAGTCAGCTTCCCAGCCCCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: ACPRMHTHPLWW*RARSQLPSPTC Trigger: ACAAGTGGGGCTGGGAAGCTGACTTCGTGCTCTTCACCACCACAAAGGATGTGTGTGCATCCTGGGGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS TCA 72 bp | ACACCTGCTCTGTGGGGCTTCAACAGAGCACACAACTaGCTCTCCTGCCGACCATGCGTAAGGCCAACACTG | + |
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Preference number: 6 (lower is better) Translates to: TPALWGFNRAHN*LSCRPCVRPTL Trigger: CAGTGTTGGCCTTACGCATGGTCGGCAGGAGAGTCAGTTGTGTGCTCTGTTGAAGCCCCACAGAGCAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS GCA 72 bp | GCTCTCTCTGCCTGGGAAGCCCTTCTGCCAGACATCTaGATGGTTCTCTCTGCACCGCCTGCAGTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: ALSAWEALLPDI*MVLSAPPAVLI Trigger: AATCAAGACTGCAGGCGGTGCAGAGAGAACCATGCAGATGTCTGGCAGAAGGGCTTCCCAGGCAGAGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | GGGGAGGTGAGAGGCTCGGGAAACCAAACCCCCAACTaGCCGCTTACCCTCACATCCTTAAACCCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GEVRGSGNQTPN*PLTLTSLNPFL Trigger: AAGGAAAGGGTTTAAGGATGTGAGGGTAAGCGGCCAGTTGGGGGTTTGGTTTCCCGAGCCTCTCACCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS TCA 72 bp | GACTGTGCCTCCTATAAGCCTGGTATCTCAGAACTCTaGGAGTGGGCTTCCCCATGGATACCAGGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DCASYKPGISEL*EWASPWIPGLP Trigger: TGGGAGCCCTGGTATCCATGGGGAAGCCCACTCTCAGAGTTCTGAGATACCAGGCTTATAGGAGGCACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000577442.5 ENST00000579780.5 ENST00000580287.5 ENST00000581662.1 ENST00000582275.5 ENST00000583182.5 ENST00000584042.1 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS TCA 72 bp | GCAGAAGGATGTTTGAGAACAGTTCTGCCCAGCTACTaGCTCCAGGGAGGCTGTCCCAAAGCCAGAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AEGCLRTVLPSY*LQGGCPKARGS Trigger: AGAGCCTCTGGCTTTGGGACAGCCTCCCTGGAGTCAGTAGCTGGGCAGAACTGTTCTCAAACATCCTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579632.5 |
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| CDS CCA 72 bp | CGGATTGGATGTCCCCAACCACATACTACCGGCCCTTaGCCCACACTTGCCTTCATCCGCTGTGAAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: RIGCPQPHTTGP*PTLAFIRCEEY Trigger: ATACTCTTCACAGCGGATGAAGGCAAGTGTGGGCCAAGGGCCGGTAGTATGTGGTTGGGGACATCCAATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584525.5 |
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| CDS TCA 72 bp | CTGATACATACTACCTCAGCAAAGAGGGGACTCCAGTaGCAGCCCCTAAGCACTCACAGGACCCAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LIHTTSAKRGLQ*QPLSTHRTQTA Trigger: TGCTGTCTGGGTCCTGTGAGTGCTTAGGGGCTGTCACTGGAGTCCCCTCTTTGCTGAGGTAGTATGTATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000584186.1 |
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| CDS GCA 72 bp | GGAAGCCCTTCTGCCAGACATCTGCATGGTTCTCTCTaGACCGCCTGCAGTCTTGATTACAGGTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSPSARHLHGSL*TACSLDYRSPS Trigger: AGAAGGTGACCTGTAATCAAGACTGCAGGCGGTGCAGAGAGAACCATGCAGATGTCTGGCAGAAGGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | TTACAACAAAGGTCCAAGAACGCTGGCTCCTTACGCTaGGCTGCTCAACACCTTAGCCACAGGGATCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQQRSKNAGSLR*AAQHLSHRDRP Trigger: AGGACGATCCCTGTGGCTAAGGTGTTGAGCAGCCCAGCGTAAGGAGCCAGCGTTCTTGGACCTTTGTTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS TCA 72 bp | ATGTTATATGGGAACAAGACAACTGGAGAAGGGTCATaGGCTGGGGAACACAGGCAAAGCACCCCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: MLYGNKTTGEGS*AGEHRQSTPTR Trigger: CCTGGTGGGGGTGCTTTGCCTGTGTTCCCCAGCTCATGACCCTTCTCCAGTTGTCTTGTTCCCATATAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS CAA 72 bp | GTGGTGAAGAGCACGAAGTCAGCTTCCCAGCCCCACTaGTTCCCAGCTGTGGAGCCTAAGACAAGTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: VVKSTKSASQPH*FPAVEPKTSCL Trigger: TAAACAACTTGTCTTAGGCTCCACAGCTGGGAACAAGTGGGGCTGGGAAGCTGACTTCGTGCTCTTCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS CAA 90 bp | ACACCCAACCCAAACACAGTTAGTCCTGTAGTTGCTCTCAGGCACTaGATATTCGCTCCCAGAAAAACCCGTGCCTCTTCTGCCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TPNPNTVSPVVALRH*IFAPRKTRASSALC Trigger: ACACAAGGCAGAAGAGGCACGGGTTTTTCTGGGAGCGAATATCAAGTGCCTGAGAGCAACTACAGGACTAACTGTGTTTGGGTTGGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS TCA 72 bp | TTTGCCTCCTCATTCAGTTTCTCTAATAGACATGGTTaGGCACCTGCAACGTGTTGGGCGATTAGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: FASSFSFSNRHG*APATCWAIRAG Trigger: CCCTGCCCTAATCGCCCAACACGTTGCAGGTGCTCAACCATGTCTATTAGAGAAACTGAATGAGGAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536708.6 |
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| CDS CAA 90 bp | ACCATCCAGAGCAGTGTGCAGGTCTCTTGTGGCACTTGTCATGCTTaGCCTCCTCATTCAGTTTCTCTAATAGACATGGTTGAGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: TIQSSVQVSCGTCHA*PPHSVSLIDMVEHL Trigger: CAGGTGCTCAACCATGTCTATTAGAGAAACTGAATGAGGAGGCAAAGCATGACAAGTGCCACAAGAGACCTGCACACTGCTCTGGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536708.6 |
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| CDS CAA 90 bp | ACCATCCAGAGCAGTGTGCAGGTCTCTTGTGGCACTTGTCATGCTTaGCCTCCTCATTCAGTTTCTCTAATAGACATGGTTGAGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: TIQSSVQVSCGTCHA*PPHSVSLIDMVEHV Trigger: CACGTGCTCAACCATGTCTATTAGAGAAACTGAATGAGGAGGCAAAGCATGACAAGTGCCACAAGAGACCTGCACACTGCTCTGGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579632.5 |
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| CDS CAA 72 bp | CCAAACACAGTTAGTCCTGTAGTTGCTCTCAGGCACTaGATATTCGCTCCCAGAAAAACCCGTGCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PNTVSPVVALRH*IFAPRKTRASS Trigger: AGAAGAGGCACGGGTTTTTCTGGGAGCGAATATCAAGTGCCTGAGAGCAACTACAGGACTAACTGTGTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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| CDS GCA 72 bp | TCGTCCTTAAACACAAATGAGATCATGTTCCTAACCTaGTCGAAACCTCCAACAGCTTCCCAGTTCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLNTNEIMFLT*SKPPTASQFTQ Trigger: CTGAGTGAACTGGGAAGCTGTTGGAGGTTTCGAGCAGGTTAGGAACATGATCTCATTTGTGTTTAAGGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582482.1 |
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| CDS CCA 72 bp | AATAAAAATCGCTCCCTCTCTAAAGGCCAGCCCTGGTaGCTAAATAACAAGAGAGTAGCTCAGCTGATACAT | + |
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Preference number: 6 (lower is better) Translates to: NKNRSLSKGQPW*LNNKRVAQLIH Trigger: ATGTATCAGCTGAGCTACTCTCTTGTTATTTAGCCACCAGGGCTGGCCTTTAGAGAGGGAGCGATTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000581662.1 ENST00000584186.1 |
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| CDS CCA 72 bp | TCAAATAAAAATCGCTCCCTCTCTAAAGGCCAGCCCTaGTGGCTAAATAACAAGAGAGTAGCTCAGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: SNKNRSLSKGQP*WLNNKRVAQLI Trigger: TATCAGCTGAGCTACTCTCTTGTTATTTAGCCACCAGGGCTGGCCTTTAGAGAGGGAGCGATTTTTATTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000578733.5 ENST00000579853.5 ENST00000581662.1 ENST00000584186.1 |
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| CDS CCA 72 bp | CACAGGTTCAGGTGTGTAAAGAGTTCAAATGTTATATaGGAACAAGACAACTGGAGAAGGGTCATGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HRFRCVKSSNVI*EQDNWRRVMSW Trigger: CCAGCTCATGACCCTTCTCCAGTTGTCTTGTTCCCATATAACATTTGAACTCTTTACACACCTGAACCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580287.5 ENST00000584063.5 ENST00000584168.5 |
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| CDS TCA 72 bp | GTATCTTCTTCACCTACTCTGGGCACTGCAGGTGGCTaGTTCATGTATAATATACTGCCAGTAACTTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSSSPTLGTAGG*FMYNILPVTLV Trigger: CACTAAAGTTACTGGCAGTATATTATACATGAATCAGCCACCTGCAGTGCCCAGAGTAGGTGAAGAAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579853.5 ENST00000581662.1 |
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| CDS CCA 72 bp | GGATTTCGAGAACTAAAGTATCTTCTTCACCTACTCTaGGCACTGCAGGTGGCTGATTCATGTATAATATAC | + |
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Preference number: 6 (lower is better) Translates to: GFRELKYLLHLL*ALQVADSCIIY Trigger: GTATATTATACATGAATCAGCCACCTGCAGTGCCCAGAGTAGGTGAAGAAGATACTTTAGTTCTCGAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579853.5 ENST00000581662.1 |
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| CDS CCA 72 bp | ATTCCATCAAAAACAATTGATTTTACCACCTACAAATaGGCAACATCTACACTCCAGTCTCTTCCCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: IPSKTIDFTTYK*ATSTLQSLPTH Trigger: GTGAGTGGGAAGAGACTGGAGTGTAGATGTTGCCCATTTGTAGGTGGTAAAATCAATTGTTTTTGATGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000580287.5 ENST00000583182.5 ENST00000584063.5 ENST00000584168.5 ENST00000585163.5 |
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