RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK5RAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136861

Ensembl transcript IDs: ENST00000349780.9, ENST00000360190.8, ENST00000360822.7, ENST00000416449.5, ENST00000425647.1, ENST00000433194.6, ENST00000468989.1, ENST00000472883.1, ENST00000473282.6, ENST00000474262.5, ENST00000480112.5, ENST00000480467.5, ENST00000481266.1, ENST00000482047.1, ENST00000483412.5, ENST00000484546.1, ENST00000491334.1, ENST00000495406.1

Found 1466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGTGGTGGCCAGTGACCAGGCGGGACACACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCC +
Preference number: 1 (lower is better)
Translates to: QVVASDQAGHTRSAS*RTATVAGEGVRVIP
Trigger: GGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGTGTGTCCCGCCTGGTCACTGGCCACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp GGAAAGGAGGGCAGCCTGCCACCCAGGCACCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAGTGCAGTGTTGATCGGTTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: GKEGSLPPRHPVQVL*PMLCAECSVDRFLF
Trigger: GAAGAGAAACCGATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCCCTCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp TCCTCCTGCACCCTGCTCAGCTCCTGGCCGCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGCCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: SSCTLLSSWPLQRTS*ISCWLCLSFSLPSF
Trigger: GAAAGAAGGCAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 90 bp TCCAATCTGCTCACAGTGAAGGGGGCACTGGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTTCAGCCGCCTGTAGGCCTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: SNLLTVKGALAILGE*DSPEKLQPPVGLFQ
Trigger: CTGGAAGAGGCCTACAGGCGGCTGAAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GCCGCCTGTAGGCCTCTTCCAGGGTCAGCTTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTGGTGCTGGGTGTGGACCCTTTGTTC +
Preference number: 1 (lower is better)
Translates to: AACRPLPGSAWPCSH*SQTCSVVLGVDPLF
Trigger: GAACAAAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GAAGCTTCAGCCGCCTGTAGGCCTCTTCCAGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACTTGCTCAGTGGTGCTGGGTGTGGAC +
Preference number: 1 (lower is better)
Translates to: EASAACRPLPGSAWP*SHCSQTCSVVLGVD
Trigger: GTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGCTGAAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GCTTCATGCTTGAATCTCAGCAGGTCGCCCTCCGTGGCCACAGTCTaGACTGAGGCATCTTTCAGTCCTACCTTGGGCACTTCGCCTGCC +
Preference number: 1 (lower is better)
Translates to: ASCLNLSRSPSVATV*TEASFSPTLGTSPA
Trigger: GGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp TCCAGAGAAGCTTCAGCCGCCTGTAGGCCTCTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCACAAACTTGCTCAGTGGTGCTGGGT +
Preference number: 1 (lower is better)
Translates to: SREASAACRPLPGSA*PCSHCSQTCSVVLG
Trigger: ACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGCTGAAGCTTCTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp CCCTGCAGCTCCAAGATCTGGCTCTGCAGCTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGT +
Preference number: 1 (lower is better)
Translates to: PCSSKIWLCSCVTTS*VAGRRYIFPNDRDG
Trigger: ACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 90 bp ATGCTTGAATCTCAGCAGGTCGCCCTCCGTGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTACCTTGGGCACTTCGCCTGCCTTTAC +
Preference number: 1 (lower is better)
Translates to: MLESQQVALRGHSLH*GIFQSYLGHFACLY
Trigger: GTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GTTTTAAACTCCTTCAGCTCCCCCTGCAGCTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCCTGGGTGGCAGGGAGACGATACATA +
Preference number: 1 (lower is better)
Translates to: VLNSFSSPCSSKIWL*SCVTTSWVAGRRYI
Trigger: TATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp CCTCCGTGGCCACAGTCTGCACTGAGGCATCTTTCAGTCCTACCTTaGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACT +
Preference number: 1 (lower is better)
Translates to: PPWPQSALRHLSVLP*ALRLPLLAGPHKTT
Trigger: AGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCCACGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp TTACAAGTTTTAAACTCCTTCAGCTCCCCCTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACCACCTCCTGGGTGGCAGGGAGACGA +
Preference number: 1 (lower is better)
Translates to: LQVLNSFSSPCSSKI*LCSCVTTSWVAGRR
Trigger: TCGTCTCCCTGCCACCCAGGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp CGCTGGCATACTCCCGCTGAAGGTGCTCCAGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATTTGTCATTCTCCTTCTGTTTATCTC +
Preference number: 1 (lower is better)
Translates to: RWHTPAEGAPGSRSS*RGTLVICHSPSVYL
Trigger: GAGATAAACAGAAGGAGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp TCTTCATCCAGCTTCTCATACGCCTTCAGCTCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGTGAGAGCAGCTGCTGCCTCAACTTC +
Preference number: 1 (lower is better)
Translates to: SSSSFSYAFSSTRRD*NSLSFCESSCCLNF
Trigger: GAAGTTGAGGCAGCAGCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTATGAGAAGCTGGATGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp GCAAGCAGGTTTATGAATGCACCTTCTTCTAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAAATCTTAGACTCCGTGTGCCTTAAG +
Preference number: 1 (lower is better)
Translates to: ASRFMNAPSSRQPGA*APSQSEILDSVCLK
Trigger: CTTAAGGCACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAACCTGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 90 bp GCCTGCAGCAACTCCTCAAATGCCTTAATCATGGTGTTCATGTGTTaGCGGGAGATGACACAGATGCCATGGCCATCCTTAATCTGCTGC +
Preference number: 1 (lower is better)
Translates to: ACSNSSNALIMVFMC*REMTQMPWPSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 90 bp CTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTaGCAACAACTCTCAAGCCAACTTTCAGAGAGAAAACATGAAGGG +
Preference number: 1 (lower is better)
Translates to: LEAFLPPVCGAPAPF*QQLSSQLSERKHEG
Trigger: CCCTTCATGTTTTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR GCA 90 bp CATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: HPRARGLFTTRLWST*TFLTTTLKPTFREK
Trigger: TTTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR GCA 90 bp CCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTC +
Preference number: 1 (lower is better)
Translates to: PGAWAPSQSEILDSV*LKYPFLQPPLERSF
Trigger: GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GGCCACACAGTAATCCACATCACTGGCCTGCAGCAACTCCTCAAATaGCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGAT +
Preference number: 1 (lower is better)
Translates to: GHTVIHITGLQQLLK*LNHGVHVLTGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACTGTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp GCATCTTTCAGTCCTACCTTGGGCACTTCGCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTCAGTTCATCATGTGGCTTGGAAAAT +
Preference number: 1 (lower is better)
Translates to: ASFSPTLGTSPAFTS*ASQDNFSSSCGLEN
Trigger: ATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 90 bp GAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTaGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTC +
Preference number: 1 (lower is better)
Translates to: EIQHPRARGLFTTRL*STCTFLTTTLKPTF
Trigger: GAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR CCA 90 bp TTGGGCTCAGAACATCTTCAGGATTTTCTTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGCAAATCTCAGAGTCAATCTCGTAGC +
Preference number: 1 (lower is better)
Translates to: LGSEHLQDFLCMMAS*QGHQVGKSQSQSRS
Trigger: GCTACGAGATTGACTCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp GGTGTCTTCTCAGTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACT +
Preference number: 1 (lower is better)
Translates to: GVFSVLPSRCSPETS*SVKNSCPRSSSRTT
Trigger: AGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGAGAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp CCCTGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGCTCCTTCACTAGCTGTATAAGGTCA +
Preference number: 1 (lower is better)
Translates to: PWKPMQERSKMVFFR*WLSVYSSFTSCIRS
Trigger: TGACCTTATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CCA 90 bp CTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGTTGTCTGTATACAGCTCCTTCACTA +
Preference number: 1 (lower is better)
Translates to: LETHFPGNPCRRDQK*FSSGAGCLYTAPSL
Trigger: TAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CCA 90 bp TGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTCTTCAGGTGCTaGTTGTCTGTATACAGCTCCTTCACTAGCTGTATAAGGTCACTG +
Preference number: 1 (lower is better)
Translates to: WKPMQERSKMVFFRC*LSVYSSFTSCIRSL
Trigger: CAGTGACCTTATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CCA 90 bp TCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCTaGAAACCCATGCAGGAGAGATCAAAAATGGTTTTCTTCAGGTGC +
Preference number: 1 (lower is better)
Translates to: SVCSVDASLSGNPFP*KPMQERSKMVFFRC
Trigger: GCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR TCA 90 bp CACTATAAAGTGAAAATGATTCTTCTTCCCGCCTCCGAATTTCGCTaGTCTGCTCCTCCAAGGTCTTCCGCAAATTCTGATATGAAAGCA +
Preference number: 1 (lower is better)
Translates to: HYKVKMILLPASEFR*SAPPRSSANSDMKA
Trigger: TGCTTTCATATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCACTTTATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CCA 90 bp TTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGACAAAATGTACAAGTTCACCTTTTT +
Preference number: 1 (lower is better)
Translates to: LLAGPHKTTSVHHVA*KMSWFGQNVQVHLF
Trigger: AAAAAGGTGAACTTGTACATTTTGTCCAAACCAACTCATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 90 bp ACTAATGAATCGTATCTGGGAGGTGAGAGATCTCTGAACTTATTCTaGAGATTATGGATCTCACTGAAAAGTTGCATGTTCAAATTCTGC +
Preference number: 1 (lower is better)
Translates to: TNESYLGGERSLNLF*RLWISLKSCMFKFC
Trigger: GCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTCCCAGATACGATTCATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRSAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 2 (lower is better)
Translates to: PCQLFLEPALQSAAGFDALAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCGGCTGTGCAGGTCCCTaGAAGGATCCTGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: GVLVAELPLSQERESVSFGCAGP*KDPAPS
Trigger: GGAAGGGGCAGGATCCTTTCAGGGACCTGCACAGCC...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLARQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLACSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGGGCACCTCAGGGATaGACACGGCTTGGACAGCCA +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRGAPQG*TRLGQP
Trigger: TGGCTGTCCAAGCCGTGTCCATCCCTGAGGTGCCCC...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGCACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 2 (lower is better)
Translates to: LLSIISGASGPRIFTCFTHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 2 (lower is better)
Translates to: GVLVAELPLSQERESVSFRFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGGTTCTCTGGCCGATaGTCTGCGCTGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPERFSGR*SALSAV
Trigger: CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRCSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGAAGGGAGAGCTCCCTaGCTTGGGACTGAACTAATG +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAEGRAP*LGTELM
Trigger: CATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTC...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 2 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNTLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp CCCTCCGTGGCCACAGTCTGCACTGAGGCATCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAAC +
Preference number: 2 (lower is better)
Translates to: PSVATVCTEASFSPT*GTSPAFTSWASQDN
Trigger: GTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCCACGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 2 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHSKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 2 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHRQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACAC +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGLLKPS*APSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRSWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGATCAGGAACAATCAGTaGGGTGGGCATGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPEIRNNQ*GGHGGM
Trigger: CATGCCACCATGCCCACCTCACTGATTGTTCCTGAT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGSIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPEHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPESPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPCVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTCTTGCTCAGTGGTGCTaGGTGTGGACCCTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: PCQLFLEPALQSAAGFDALAQWC*VWTLCS
Trigger: GGAACAAAGGGTCCACACCCAGCACCACTGAGCAAG...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPEHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp ACCCCGTGCAGGTTCTCTGGCCGATGCTCTGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTG +
Preference number: 2 (lower is better)
Translates to: TPCRFSGRCSALSAV*IGFSSQASLVASCL
Trigger: CAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCAGGTTCTCTGGCCGATaGTCTGCGCTGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPRFSGR*SALSAV
Trigger: CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAACACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 2 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 2 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDSKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: LLSIISGASGPRIFTCFTNHSWA*SSHPGP
Trigger: GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTT...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTGCTCTGCAGAGTGCTaGTGGTTTCGATGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPECSAEC*WFRCSF
Trigger: AAAGGAGCATCGAAACCAGCAGCACTCTGCAGAGCA...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGRFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 2 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCGGGATGGACACGGCTTaGACAGCCAGAGTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESGMDTA*TARVRA
Trigger: AGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCC...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGAACAATCAGTGAGGTaGGCATGGTGGCATGTGCCT +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDEQSVR*AWWHVP
Trigger: AGGCACATGCCACCATGCCCACCTCACTGATTGTTC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CAA 90 bp GTGTTGATCGGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCCTCCGTGGCCACAGTCTGCACTGAG +
Preference number: 2 (lower is better)
Translates to: VLIGFSSQASLVASC*NLSRSPSVATVCTE
Trigger: CTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACCGATCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: GVLVAELPLSQERESVSFGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPLICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCCTGCCTGGTGGCTGTTaGGAAGAGCACTTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGLPGGC*EEHFSV
Trigger: AACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAG...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALSFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPEVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCTCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GVLVAELPLSQERESVSFMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGCACCTGCACCTTTCTaGCAACAACTCTCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEAPAPF*QQLSSQ
Trigger: TTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR TCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: PCQLFLEPALQSAAGFDASSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPEPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGAT +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESLWPML*AECSVD
Trigger: ATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAG...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATCCTGTTCCTCCAGCTaGTGTTTGAGGTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPSCSSS*CLRFSS
Trigger: GCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCTCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESSIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 2 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAASEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 2 (lower is better)
Translates to: LLSIISGASGPRIFTCFTGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATTAAGCCTTCACTCCTaGGCTCAAGATCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPLSLHS*AQDPLQ
Trigger: CTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 2 (lower is better)
Translates to: GVLVAELPLSQERESVSFVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACT +
Preference number: 2 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERLWST*TFLTTT
Trigger: AGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACT +
Preference number: 2 (lower is better)
Translates to: STPVPAPDLKYNIQELEARLWST*TFLTTT
Trigger: AGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 2 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCCAAGCCTCTCTTGTTaGTTCATGCTTGAATCTCAG +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDPSLSC*FMLESQ
Trigger: CTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCATGCTCTGCGCTGAGTaGAGTGTTGATCGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPMLCAE*SVDRFL
Trigger: GAGAAACCGATCAACACTGCACTCAGCGCAGAGCAT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGACTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRLQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGSFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGSPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAAGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 2 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 2 (lower is better)
Translates to: LVAELPLSQERESVSFPESISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFLLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: RTATVAGEGVRVIPREWRTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 2 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAALFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRVHHVA*KMSWFG
Trigger: TCCAAACCAACTCATTTTCCAAGCCACATGATGAAC...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp GGCCTGCAGCAACTCCTCAAATGCCTTAATCATGGTGTTCATGTGTaGACGGGAGATGACACAGATGCCATGGCCATCCTTAATCTGCTG +
Preference number: 2 (lower is better)
Translates to: GLQQLLKCLNHGVHV*TGDDTDAMAILNLL
Trigger: CAGCAGATTAAGGATGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTGCTGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTAC +
Preference number: 2 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRGHSLH*GIFQSY
Trigger: GTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCC...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 2 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGATGTTAGAGAACTATaGAGCTCTGAACCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFDVREL*SSEPEA
Trigger: TGCTTCTGGTTCAGAGCTTCATAGTTCTCTAACATC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCACCAAGCCTCTCTTGTTaGTTCATGCTTGAATCTCAG +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPPSLSC*FMLESQ
Trigger: CTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGG...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACACGTATCGCACTTGGTaGAAACTTGAAAAGGTCATT +
Preference number: 2 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDTYRTW*KLEKVI
Trigger: AATGACCTTTTCAAGTTTGCACCAAGTGCGATACGT...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 2 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 2 (lower is better)
Translates to: LIQLFLETLGHTVIHITGHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 2 (lower is better)
Translates to: TLLSIISGASGPRIFTCFSLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 2 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKLLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCTCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESSFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 2 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 2 (lower is better)
Translates to: KYPFLQPPLERSFIISLLAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPSISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCACTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATC +
Preference number: 2 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPLCCKC*SLRKLI
Trigger: GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAG...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CAA 90 bp TCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTaGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACT +
Preference number: 2 (lower is better)
Translates to: SEIQHPRARGLFTTR*WSTCTFLTTTLKPT
Trigger: AGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR CAA 90 bp AAATGCTGGTCACTCAGGAAATTAATCTCGTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCCTTGCTAGCCAGAAGCTACATGGAG +
Preference number: 2 (lower is better)
Translates to: KCWSLRKLISSSSPI*IVSSSSLLARSYME
Trigger: CTCCATGTAGCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGAGATTAATTTCCTGAGTGACCAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 2 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 2 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 2 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CAA 90 bp ATCTCACTGAAAAGTTGCATGTTCAAATTCTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGCTGCTGTTTGAGGTTCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: ISLKSCMFKFCSFCS*YSCSSSCCLRFSST
Trigger: GGTGCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSLPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCTCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGT +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESSPETS*SVKNSC
Trigger: ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGA...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCATAATCTCATTACTCTaGTGCAAATGCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESIISLL*CKCWSL
Trigger: GAGTGACCAGCATTTGCAGCAGAGTAATGAGATTAT...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 2 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAG +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISPVQVL*PMLCAE
Trigger: CTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGG...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTTCAGTGAGGTGGGCATaGTGGCATGTGCCTATAATC +
Preference number: 2 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSSVRWA*WHVPII
Trigger: GATTATAGGCACATGCCACCATGCCCACCTCACTGA...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 2 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CAA 90 bp TTCAGAAGGTCTGGCCTGGATTCCAGTAATAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTAGG +
Preference number: 2 (lower is better)
Translates to: FRRSGLDSSNNVAFS*NKGASRFMNAPSSR
Trigger: CCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATTATTACTGGAATCCAGGCCAGACCTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 2 (lower is better)
Translates to: GFSSQASLVASCLNLSRSMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMSSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGTTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALLSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp AAACCCATGCAGGAGAGATCAAAAATGGTTTTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTCACTAGCTGTATAAGGTCACTGACC +
Preference number: 2 (lower is better)
Translates to: KPMQERSKMVFFRCW*SVYSSFTSCIRSLT
Trigger: GGTCAGTGACCTTATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCTTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 2 (lower is better)
Translates to: NLITLLQMLVTQEINLVILLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR TCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 2 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 2 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCTATGAAAGCACATCCTaGTCCAGTTGCTTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: NLITLLQMLVTQEINLVIYESTS*SSCFRR
Trigger: CCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCATA...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTA +
Preference number: 2 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKLLCCK*WSLRKL
Trigger: TAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRARRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: NLITLLQMLVTQEINLVIVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISCMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 2 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRLSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTACCTCCTGGATCAGCTaGTGGTTGTGTCTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISTSWIS*WLCLSF
Trigger: GAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGT...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 2 (lower is better)
Translates to: NLITLLQMLVTQEINLVISEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGAAGCTACATGGAGCATaGAATGGTGTGAAAATGCAA +
Preference number: 2 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMKLHGA*NGVKMQ
Trigger: TTGCATTTTCACACCATTCCATGCTCCATGTAGCTT...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACT +
Preference number: 2 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIRLWST*TFLTTT
Trigger: AGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR CAA 90 bp TCACAATCTGAAATCTTAGACTCCGTGTGCCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTGC +
Preference number: 2 (lower is better)
Translates to: SQSEILDSVCLKYPF*QPPLERSFIISLLC
Trigger: GCAGAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTCAGATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp TTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATCATGTGGCTaGGAAAATGAGTTGGTTTGGACAAAATGTACAAGTTCACCTTTT +
Preference number: 2 (lower is better)
Translates to: FTSWASQDNFSSSCG*ENELVWTKCTSSPF
Trigger: AAAAGGTGAACTTGTACATTTTGTCCAAACCAACTCATTTTCCAAGCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 90 bp GAGATCTCTGAACTTATTCTGCAGATTATGGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTCCTTCTGCAGCTTGTATTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: EISELILQIMDLTEK*HVQILLLLQLVFLF
Trigger: GAACAGGAATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCAACTTTTCAGTGAGATCCATAATCTGCAGAATAAGTTCAGAGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR GCA 90 bp ATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 2 (lower is better)
Translates to: IWKPISLETHAGEIKNGFILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...AAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR GCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR TCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 2 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 2 (lower is better)
Translates to: DSSKRFLKVRISCMCSISFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp GGCAGCCTGCCACCCAGGCACCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAGTGCAGTGTTGATCGG +
Preference number: 3 (lower is better)
Translates to: GSLPPRHPVQVL*PMLCAECSVDR
Trigger: CCGATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTGGCAGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp CCCAGGACATGGCGGCCATTCTTGCTGGCCCACAGGTaGTGGCCAGTGACCAGGCGGGACACACACGGAGTG +
Preference number: 3 (lower is better)
Translates to: PRTWRPFLLAHR*WPVTRRDTHGV
Trigger: CACTCCGTGTGTGTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp GCCAGTGACCAGGCGGGACACACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGT +
Preference number: 3 (lower is better)
Translates to: ASDQAGHTRSAS*RTATVAGEGVR
Trigger: ACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGTGTGTCCCGCCTGGTCACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp ACCCTGCTCAGCTCCTGGCCGCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTG +
Preference number: 3 (lower is better)
Translates to: TLLSSWPLQRTS*ISCWLCLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp CTCACAGTGAAGGGGGCACTGGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTTCAGCCGCCTGTAGGC +
Preference number: 3 (lower is better)
Translates to: LTVKGALAILGE*DSPEKLQPPVG
Trigger: GCCTACAGGCGGCTGAAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGCCAGTGCCCCCTTCACTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: RTATVAGEGVRVIPREWRAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp TCTCAGCAGGTCGCCCTCCGTGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTACCTTGGGCACTTCGCC +
Preference number: 3 (lower is better)
Translates to: SQQVALRGHSLH*GIFQSYLGHFA
Trigger: GGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp CCCAGGCACCCCGTGCAGGTTCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGATCGGTTTCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: PRHPVQVLWPML*AECSVDRFLFP
Trigger: TGGGAAGAGAAACCGATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGGGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp AGCTCCTGGCCGCTGCAGCGGACCTCCTGGATCAGCTaGTGGTTGTGTCTCTCCTTCTCGCTGCCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: SSWPLQRTSWIS*WLCLSFSLPSF
Trigger: GAAAGAAGGCAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp GCCGCCTGTAGGCCTCTTCCAGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACTTGCTCAGTGGTGCTG +
Preference number: 3 (lower is better)
Translates to: AACRPLPGSAWP*SHCSQTCSVVL
Trigger: CAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPEAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACAGGGATGGACACGGCTaGGACAGCCAGAGTGAGGGC +
Preference number: 3 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDRDGHG*DSQSEG
Trigger: GCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCT...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPESSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp AGGCCTCTTCCAGGGTCAGCTTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTGGTGCTGGGTGTGGAC +
Preference number: 3 (lower is better)
Translates to: RPLPGSAWPCSH*SQTCSVVLGVD
Trigger: GTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGGTGTCCTCGTCCTCCTaGCTAGCCAGAAGCTACATG +
Preference number: 3 (lower is better)
Translates to: RTATVAGEGVRVIPREWRVSSSS*LARSYM
Trigger: CATGTAGCTTCTGGCTAGCAAGGAGGACGAGGACAC...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCTGGGTGTGGACCCTTaGTTCCCAGCTCTTGACTTG +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPELGVDP*FPALDL
Trigger: CAAGTCAAGAGCTGGGAACAAAGGGTCCACACCCAG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAASFSPT*GTSPAF
Trigger: AAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: TLLSIISGASGPRIFTCFEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCCATCAGAACCATTCTaGGGCTTGCTCAAGCCATCC +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPEPSEPF*GLLKPS
Trigger: GGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCATCAGAACCATTCTaGGGCTTGCTCAAGCCATCC +
Preference number: 3 (lower is better)
Translates to: GVLVAELPLSQERESVSFPSEPF*GLLKPS
Trigger: GGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GVLVAELPLSQERESVSFCSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRCSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp TTCCAGCCTTCTCCCGACGCCTCTCTCAGTCTCCTGTaGTCTTCATCCAGCTTCTCATACGCCTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: FQPSPDASLSLL*SSSSFSYAFSS
Trigger: GGAGCTGAAGGCGTATGAGAAGCTGGATGAAGAGCACAGGAGACTGAGAGAGGCGTCGGGAGAAGGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCC +
Preference number: 3 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGLVASC*NLSRSP
Trigger: GGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAG...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: GVLVAELPLSQERESVSFQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAG +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPEGSLLG*NVHFSK
Trigger: CTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCC...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAATFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: PCQLFLEPALQSAAGFDASSSPI*IVSSSS
Trigger: GGAGGACGAGGACACGATCAAAATTGGGGAGGATGA...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR TCA 72 bp GGCGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTaGAATACAACATCCAAGAGCTCGAGGCCTTTTTAC +
Preference number: 3 (lower is better)
Translates to: GAQPQLRCLPLI*NTTSKSSRPFY
Trigger: GTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR GCA 72 bp TGCAGAGTGCTGCTGGTTTCGATGCTCCTTTCTAGTTaGAAGCGCAGAGCCTGGATCTCCATCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: CRVLLVSMLLSS*KRRAWISIRRL
Trigger: CAGCCTCCTGATGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCACTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVALSAV*IGFSSQ
Trigger: TTGGGAAGAGAAACCGATCAACACTGCACTCAGCGC...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 3 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATGGATCAGCTGCTGGTaGTGTCTCTCCTTCTCGCTG +
Preference number: 3 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPWISCW*CLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPERDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp GTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCTCCGTGGCCACAGTCT +
Preference number: 3 (lower is better)
Translates to: VSLPKPLLLLHA*ISAGRPPWPQS
Trigger: AGACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp TCCATGGGATATTTGTCACCATCGTGTTTGTCAGGCTaGAGGGGCACCTCAGGGATGGACACGGCTTGGACA +
Preference number: 3 (lower is better)
Translates to: SMGYLSPSCLSG*RGTSGMDTAWT
Trigger: TGTCCAAGCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAATATCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp AGGTCATTTCTTCCCCATCAGAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCCCTTCTGTCCCACACA +
Preference number: 3 (lower is better)
Translates to: RSFLPHQNHSWA*SSHPGPLLSHT
Trigger: TGTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp TCCAAGATCTGGCTCTGCAGCTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATACATATTTCCTAATGAC +
Preference number: 3 (lower is better)
Translates to: SKIWLCSCVTTS*VAGRRYIFPND
Trigger: GTCATTAGGAAATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp TTTGAGGTTCTCCAGCACCCTGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGATTTTCACGTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: FEVLQHPAVNHL*GQRTEDFHVFH
Trigger: GTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGTGCTGGAGAACCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp ACTCCCGCTGAAGGTGCTCCAGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATTTGTCATTCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: TPAEGAPGSRSS*RGTLVICHSPS
Trigger: AGAAGGAGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACCTTCAGCGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 3 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 3 (lower is better)
Translates to: LVAELPLSQERESVSFPENKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 3 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR GCA 72 bp AGCTTCTCATACGCCTTCAGCTCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGTGAGAGCAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SFSYAFSSTRRD*NSLSFCESSCC
Trigger: GCAGCAGCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTATGAGAAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp AGTCCTACCTTGGGCACTTCGCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTCAGTTCATCATGTGGC +
Preference number: 3 (lower is better)
Translates to: SPTLGTSPAFTS*ASQDNFSSSCG
Trigger: GCCACATGATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 3 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDNVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 3 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPSACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTTCTTAGCCTCTCTGTaGGTAATACCAGGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDFLASL*VIPGRE
Trigger: TTCCCTCCCTGGTATTACCAACAGAGAGGCTAAGAA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPRDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACTCTCAAGCCAACTTTC +
Preference number: 3 (lower is better)
Translates to: ARGLFTTRLWST*TFLTTTLKPTF
Trigger: GAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR GCA 72 bp TGCTTATTACAAGTTTTAAACTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTCTGCAGCTGCGTCACC +
Preference number: 3 (lower is better)
Translates to: CLLQVLNSFSSP*SSKIWLCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGAGTTTAAAACTTGTAATAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp CATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTaGAGCACCTGCACCTTTCTGACAACAACTCTCAAG +
Preference number: 3 (lower is better)
Translates to: HPRARGLFTTRL*STCTFLTTTLK
Trigger: CTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR CAA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 3 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 3 (lower is better)
Translates to: PCQLFLEPALQSAAGFDARDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp CTGAAGTTGGGCTCAGAACATCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAAGGTCATCAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LKLGSEHLQDFL*MMASWQGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp TTTATGAATGCACCTTCTTCTAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAAATCTTAGACTCCGTG +
Preference number: 3 (lower is better)
Translates to: FMNAPSSRQPGA*APSQSEILDSV
Trigger: CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGGTGCATTCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp CCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACACAAAACTGTAATTATG +
Preference number: 3 (lower is better)
Translates to: PSEPFLGLLKPS*APSVPHKTVIM
Trigger: CATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATTCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 3 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 3 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp ATAAATAGGAACCACACTTGGAACAAAGAGACAGCGTaGGCTCGGTGGGGGAAGCACAAGCTTTATTGGCTG +
Preference number: 3 (lower is better)
Translates to: INRNHTWNKETA*ARWGKHKLYWL
Trigger: CAGCCAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCCTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR TCA 72 bp AATAGCTTTTCCAATTTCTCCAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAACCCTCGGCCACACAG +
Preference number: 3 (lower is better)
Translates to: NSFSNFSSSSAH*FSCSWKPSATQ
Trigger: CTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTGGAGAAATTGGAAAAGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 3 (lower is better)
Translates to: LIQLFLETLGHTVIHITGNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 3 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 3 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 3 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGCGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRARRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR TCA 72 bp GTGAAAATGATTCTTCTTCCCGCCTCCGAATTTCGCTaGTCTGCTCCTCCAAGGTCTTCCGCAAATTCTGAT +
Preference number: 3 (lower is better)
Translates to: VKMILLPASEFR*SAPPRSSANSD
Trigger: ATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAAGAATCATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp ATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 3 (lower is better)
Translates to: IWKPISLETHAGEIKNGFNVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...AAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCAACTCAGCCTGCAGGTaGTTGATACTGTCTGATTCC +
Preference number: 3 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPNSACR*LILSDS
Trigger: GGAATCAGACAGTATCAACAACCTGCAGGCTGAGTT...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR TCA 72 bp TTCAGATGTTTCATAATCAGAGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGGCAGAAGATGTTGGTA +
Preference number: 3 (lower is better)
Translates to: FRCFIIRERMRG*RLRRFRQKMLV
Trigger: TACCAACATCTTCTGCCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTCTCTGATTATGAAACATCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp TGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: WAPSQSEILDSV*LKYPFLQPPLE
Trigger: TTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp CCCATGCAGGAGAGATCAAAAATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGCTCCTTCACTAGCTGT +
Preference number: 3 (lower is better)
Translates to: PMQERSKMVFFR*WLSVYSSFTSC
Trigger: ACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CCA 72 bp GAACATCTTCAGGATTTTCTTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGCAAATCTCAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: EHLQDFLCMMAS*QGHQVGKSQSQ
Trigger: TTGACTCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAAAAAATAGATTTCCTTaGGCCAGACAGCTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPKNRFP*ARQLFL
Trigger: AAGAAAGAGCTGTCTGGCCAAAGGAAATCTATTTTT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTAAAAATAGATTTCCTTaGGCCAGACAGCTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSKNRFP*ARQLFL
Trigger: AAGAAAGAGCTGTCTGGCCAAAGGAAATCTATTTTT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR-3UTR CAA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp TCAGTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGTCCCAGAAGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: SVLPSRCSPETS*SVKNSCPRSSS
Trigger: GGAACTGCTTCTGGGACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp CAAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGGTTTTCTTCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: QVYLETHFPGNP*RRDQKWFSSGA
Trigger: AGCACCTGAAGAAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAACCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 3 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR TCA 72 bp TATTCTGTCTCATTTGAGGTATTAATGCTCTCTGACTaGTCAGTCCCCATCACACTGACTTTAGCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: YSVSFEVLMLSD*SVPITLTLAEG
Trigger: GCCTTCTGCTAAAGTCAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAATACCTCAAATGAGACAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp AAGTTGTCTTCCTCAATCCTCTCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCAACTGATTTTCCGTTG +
Preference number: 3 (lower is better)
Translates to: KLSSSILSISSF*VFISTPTDFPL
Trigger: CAACGGAAAATCAGTTGGAGTGGAAATGAACACCCAGAATGAACTGATGGAGAGGATTGAGGAAGACAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp AGGTCTTTCATAATCTCATTACTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATCTCGTCATCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: RSFIISLLCCKC*SLRKLISSSSP
Trigger: TGGGGAGGATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATTATGAAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR GCA 72 bp GAAAGGTCTTTCATAATCTCATTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTAATCTCGTCATCCTCC +
Preference number: 3 (lower is better)
Translates to: ERSFIISLLCCK*WSLRKLISSSS
Trigger: GGAGGATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATTATGAAAGACCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR-3UTR CAA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGG +
Preference number: 3 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCLKYPF*QPPLER
Trigger: CCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR GCA 72 bp TTCACCATAACTGAAGTCTTCTCTGTCTCATTATCTTaGTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGAT +
Preference number: 3 (lower is better)
Translates to: FTITEVFSVSLS*FWSREKKDFSD
Trigger: ATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGAGACAGAGAAGACTTCAGTTATGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: DSSKRFLKVRISCMCSISALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CCA 72 bp ATAACTGAAGTCTTCTCTGTCTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCA +
Preference number: 3 (lower is better)
Translates to: ITEVFSVSLSCF*SREKKDFSDVS
Trigger: TGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGAGACAGAGAAGACTTCAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTACAAGTTCACCTTTTaGCTTAGGTGTCTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: DSSKRFLKVRISCMCSISYKFTF*LRCLLS
Trigger: ACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR-3UTR CAA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 3 (lower is better)
Translates to: DSSKRFLKVRISCMCSISRDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGCCTCCTCCTGCACCCTaGTCAGCTCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRPPPAP*SAPGRC
Trigger: GCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGAGG...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSTLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGCGGCCATTCTTGCTaGCCCACAGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRGGHSC*PTGGGQ
Trigger: CTGGCCACCACCTGTGGGCCAGCAAGAATGGCCGCC...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGCTGTGCAGGTCCCTaGAAGGATCCTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRGCAGP*KDPAPS
Trigger: GGAAGGGGCAGGATCCTTTCAGGGACCTGCACAGCC...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCCACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTGGTCTGCTGGGACTaGATGTTCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALVCWD*MFLDGL
Trigger: GAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAGGTGGCGACAGCGTTaGTGTCTGTGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERWRQR*CLWRRR
Trigger: GCGCCGCCGCCACAGACACCAACGCTGTCGCCACCT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPEPVQVL*PMLCAE
Trigger: CTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCCCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALWPML*AECSVD
Trigger: ATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHSAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCCTCCTCCTGCACCCTaGTCAGCTCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHPPPAP*SAPGRC
Trigger: GCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGAGG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCAGGTGGCGACAGCGTTaGTGTCTGTGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFRWRQR*CLWRRR
Trigger: GCGCCGCCGCCACAGACACCAACGCTGTCGCCACCT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAGGTGGCGACAGCGTTaGTGTCTGTGGCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHRWRQR*CLWRRR
Trigger: GCGCCGCCGCCACAGACACCAACGCTGTCGCCACCT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRRQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTGCAAGCGCAGAGCCTaGATCTCCATCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRCKRRA*ISIRRL
Trigger: CAGCCTCCTGATGGAGATCCAGGCTCTGCGCTTGCA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGGCGGCCATTCTTGCTaGCCCACAGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAGGHSC*PTGGGQ
Trigger: CTGGCCACCACCTGTGGGCCAGCAAGAATGGCCGCC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCGTCCCAGGGACGGTaGCGTCCTCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAASQGR*RPLPTP
Trigger: TGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGGCTGTGCAGGTCCCTaGAAGGATCCTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEGCAGP*KDPAPS
Trigger: GGAAGGGGCAGGATCCTTTCAGGGACCTGCACAGCC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR TCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTCGTGTTTGTCAGGCTaGAGGGGCACCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAASCLSG*RGTSGM
Trigger: CATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCCCAATCTGCTCACAGTaGAGGGGGCACTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGPICSQ*RGHWPS
Trigger: GGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGG...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLWPML*AECSVD
Trigger: ATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAG...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCATGGCGGCCATTCTTaGTGGCCCACAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEHGGHS*WPTGGG
Trigger: GCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGCATGGCGGCCATTCTTaGTGGCCCACAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVHGGHS*WPTGGG
Trigger: GCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATG...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEPVQVL*PMLCAE
Trigger: CTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSCVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLTLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGGGGCACCTCAGGGATaGACACGGCTTGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAGAPQG*TRLGQP
Trigger: TGGCTGTCCAAGCCGTGTCCATCCCTGAGGTGCCCC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGGGGCACCTCAGGGATaGACACGGCTTGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFGAPQG*TRLGQP
Trigger: TGGCTGTCCAAGCCGTGTCCATCCCTGAGGTGCCCC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESLAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGCTTGCTCAGTGGTGCTaGGTGTGGACCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLAQWC*VWTLCS
Trigger: GGAACAAAGGGTCCACACCCAGCACCACTGAGCAAG...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGGGACTGCATGTTCCTaGATGGGCTCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEGTACS*MGSPRP
Trigger: AGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCGCGTCCCAGGGACGGTaGCGTCCTCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFASQGR*RPLPTP
Trigger: TGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGC...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAGCGTCCCAGGGACGGTaGCGTCCTCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPASQGR*RPLPTP
Trigger: TGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGC...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCTTGGTGAGGTTTTGTaGGCGCAGCGCAGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDLGEVL*AQRSRK
Trigger: CTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDLAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGLPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGSFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPENHSWA*SSHPGP
Trigger: GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCCTCCTCCTGCACCCTaGTCAGCTCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVPPPAP*SAPGRC
Trigger: GCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGAGG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGCCTCCTCCTGCACCCTaGTCAGCTCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSPPPAP*SAPGRC
Trigger: GCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGAGG...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTGTGAGAGCAGCTGCTaGCTCAACTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAACESSC*LNFTSS
Trigger: GGAGGAGGTGAAGTTGAGGCAGCAGCTGCTCTCACA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCGCCTGCTCTGCAGAGTaGTGCTGGTTTCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGACSAE*CWFRCS
Trigger: GGAGCATCGAAACCAGCAGCACTCTGCAGAGCAGGC...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATCCTTGAGCCTGCTCTaGAGAGTGCTGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSLSLL*RVLLVS
Trigger: CGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: GVLVAELPLSQERESVSFTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQACVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSCSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSTLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLATLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGGGATGGACACGGCTTaGACAGCCAGAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAGMDTA*TARVRA
Trigger: AGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSLAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACCAGTGGTGCTGGGTGTaGACCCTTTGTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHQWCWV*TLCSQL
Trigger: GAGCTGGGAACAAAGGGTCCACACCCAGCACCACTG...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGCTCCAGGTTTCCTCTaGCCTTCCGAAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAAPGFL*PSEGFC
Trigger: ACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGC...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCGGGACTGCATGTTCCTaGATGGGCTCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFGTACS*MGSPRP
Trigger: AGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCC...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGGGACTGCATGTTCCTaGATGGGCTCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHGTACS*MGSPRP
Trigger: AGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTCAAGAAACTGAGGTaGGAGGATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALKKLR*EDHLSP
Trigger: TGGGCTCAAGTGATCCTCCCACCTCAGTTTCTTGAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCGCGTCCCAGGGACGGTaGCGTCCTCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGASQGR*RPLPTP
Trigger: TGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGC...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSTQHWG*CHPGHL
Trigger: CAGATGACCTGGATGGCATCAACCCCAATGCTGGGT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDATQHWG*CHPGHL
Trigger: CAGATGACCTGGATGGCATCAACCCCAATGCTGGGT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTCCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGLAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGGGCTGTGCAGGTCCCTaGAAGGATCCTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALGCAGP*KDPAPS
Trigger: GGAAGGGGCAGGATCCTTTCAGGGACCTGCACAGCC...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCCAATCTGCTCACAGTaGAGGGGGCACTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFPICSQ*RGHWPS
Trigger: GGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCATCCAGGGGAAGACGTaGAGCCCACCAAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFIQGKT*SPPRRT
Trigger: TGTGCGCCTTGGTGGGCTTCACGTCTTCCCCTGGAT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGGCCTTTTCCAGTTCTaGCTGGGCGGCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAGLFQF*LGGCHI
Trigger: GATGTGACAGCCGCCCAGGCAGAACTGGAAAAGGCC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQASFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCTCCTGTTCCTCCAGCTaGTGTTTGAGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLVAELPLSQERESVSFSCSSS*CLRFSS
Trigger: GCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGA...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTGGTCTGCTGGGACTaGATGTTCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELVCWD*MFLDGL
Trigger: GAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTCTGGCGGCGCCGCTaGAATTCAAACCACAGACGC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLWRRR*NSNHRR
Trigger: GCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCCTCTTGTTCAGACTCTaGCGGCGCCGCTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSLLFRL*RRRWNS
Trigger: TGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAG...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTTTCCAGTTCTGCCTaGGCGGCTGTCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRFSSSA*AAVTSF
Trigger: AAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEARQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHCVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQACSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHRFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALLKPS*APSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTGCAAGCGCAGAGCCTaGATCTCCATCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQACKRRA*ISIRRL
Trigger: CAGCCTCCTGATGGAGATCCAGGCTCTGCGCTTGCA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGGCGGCCATTCTTGCTaGCCCACAGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSGGHSC*PTGGGQ
Trigger: CTGGCCACCACCTGTGGGCCAGCAAGAATGGCCGCC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCCCAGCTCTTGACTTGTaGAGCTGGGAGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFPALDL*SWEPLG
Trigger: CCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGG...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTGCATGTTCCTGGATaGGCTCCCCCAGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLHVPG*APPGLS
Trigger: GCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR CAA 72 bp GCCACAGTCTGCACTGAGGCATCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ATVCTEASFSPT*GTSPAFTSWAS
Trigger: TGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGCGTCCCAGGGACGGTaGCGTCCTCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVASQGR*RPLPTP
Trigger: TGGTGTTGGAAGAGGACGTCACCGTCCCTGGGACGC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTTGGTGAGGTTTTGTaGGCGCAGCGCAGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLGEVL*AQRSRK
Trigger: CTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACCATCCTCCCCAATTTTaGTCGTGTCCTCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHHPPQF*SCPRPP
Trigger: AGGAGGACGAGGACACGATCAAAATTGGGGAGGATG...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAGHSLH*GIFQSY
Trigger: GTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFLICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGGCTGTGCAGGTCCCTaGAAGGATCCTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSGCAGP*KDPAPS
Trigger: GGAAGGGGCAGGATCCTTTCAGGGACCTGCACAGCC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCGTGTTTGTCAGGCTaGAGGGGCACCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSCLSG*RGTSGM
Trigger: CATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACGTCCTTCATGTTCCGTaGTCTGGTGGGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHVLHVP*SGGRHC
Trigger: ACAGTGTCTCCCACCAGAGCACGGAACATGAAGGAC...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCGGCCTTTTCCAGTTCTaGCTGGGCGGCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFGLFQF*LGGCHI
Trigger: GATGTGACAGCCGCCCAGGCAGAACTGGAAAAGGCC...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPEAKSPS*IFFISE
Trigger: TTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGC...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAGTCTCTCCCTCTCCTaGTGCAAGTCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQESLSLS*CKSLSS
Trigger: GGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELWPML*AECSVD
Trigger: ATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAACACCCAGGCACCCCGTaGAGGTTCTCTGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREHPGTP*RFSGRC
Trigger: GCATCGGCCAGAGAACCTGCACGGGGTGCCTGGGTG...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSSAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGCCTGCTCTGCAGAGTaGTGCTGGTTTCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHACSAE*CWFRCS
Trigger: GGAGCATCGAAACCAGCAGCACTCTGCAGAGCAGGC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCATGGCGGCCATTCTTaGTGGCCCACAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVHGGHS*WPTGGG
Trigger: GCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSWPCSH*SQTCSV
Trigger: CACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACT +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTGSAWP*SHCSQT
Trigger: AGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCC...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTGGCGCTTGCTCAGCTaGAAAAGCTTCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRWRLLS*KSFMVF
Trigger: AAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCATGGCTACAGAGGTaGCGACAGCGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASWLQR*RQRWCL
Trigger: CAGACACCAACGCTGTCGCCACCTCTGTAGCCATGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGACTCCTTTTCTTCCCTTaGAGCAGCACAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRLLFFP*SSTKSS
Trigger: CGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAGGAG...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPRQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSSPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNCVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPCSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTCMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLLKPS*APSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLLKPS*APSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHSWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTACCCTGCTCAGCTCCTaGCCGCTGCAGCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSTLLSS*PLQRTS
Trigger: GGAGGTCCGCTGCAGCGGCCAGGAGCTGAGCAGGGT...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTTGCAAGCGCAGAGCCTaGATCTCCATCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSCKRRA*ISIRRL
Trigger: CAGCCTCCTGATGGAGATCCAGGCTCTGCGCTTGCA...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGGGATGGACACGGCTTaGACAGCCAGAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLGMDTA*TARVRA
Trigger: AGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCGGGATGGACACGGCTTaGACAGCCAGAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGGMDTA*TARVRA
Trigger: AGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCC...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAGGAGCCTCTGTCCCTaGCTGATCTGTTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEARSLCP*LICLSR
Trigger: CCTGCTCAAACAGATCAGCCAGGGACAGAGGCTCCT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCAGGAGCCTCTGTCCCTaGCTGATCTGTTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFRSLCP*LICLSR
Trigger: CCTGCTCAAACAGATCAGCCAGGGACAGAGGCTCCT...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACCAGCTCTTGACTTGTaGAGCTGGGAGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTPALDL*SWEPLG
Trigger: CCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLPGSA*PCSHCS
Trigger: TGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTCTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSLPGSA*PCSHCS
Trigger: TGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAG...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTGAACAATCAGTGAGGTaGGCATGGTGGCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAEQSVR*AWWHVP
Trigger: AGGCACATGCCACCATGCCCACCTCACTGATTGTTC...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
3UTR CAA 72 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCCTCCGTGGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASC*NLSRSPSVATV
Trigger: GACTGTGGCCACGGAGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTTQHWG*CHPGHL
Trigger: CAGATGACCTGGATGGCATCAACCCCAATGCTGGGT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDTQHWG*CHPGHL
Trigger: CAGATGACCTGGATGGCATCAACCCCAATGCTGGGT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCCTGTTTCTCTCCTTCTaGTGCTCCATTTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGLFLSF*CSICAA
Trigger: GGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAG...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTTGGTGAGGTTTTGTaGGCGCAGCGCAGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLGEVL*AQRSRK
Trigger: CTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCTTGGTGAGGTTTTGTaGGCGCAGCGCAGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNLGEVL*AQRSRK
Trigger: CTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCCTGCCTGGTGGCTGTTaGGAAGAGCACTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSLPGGC*EEHFSV
Trigger: AACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAG...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCATCCTCCCCAATTTTaGTCGTGTCCTCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAHPPQF*SCPRPP
Trigger: AGGAGGACGAGGACACGATCAAAATTGGGGAGGATG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACCTCCAGCTGCTGTTTaGGGTTCTCCAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPPPAAV*GSPAPC
Trigger: GCAGGGTGCTGGAGAACCTCAAACAGCAGCTGGAGG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHLPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTCGTGTTTGTCAGGCTaGAGGGGCACCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNSCLSG*RGTSGM
Trigger: CATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCGGAGCCTCTTGGGTTTaGATGTCCATTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGGASWV*MSISAR
Trigger: CCTTGCTGAAATGGACATTCAAACCCAAGAGGCTCC...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHAILGE*DSPEKL
Trigger: AAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAATCCAGGGGAAGACGTaGAGCCCACCAAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPIQGKT*SPPRRT
Trigger: TGTGCGCCTTGGTGGGCTTCACGTCTTCCCCTGGAT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGGGCCTTTTCCAGTTCTaGCTGGGCGGCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALGLFQF*LGGCHI
Trigger: GATGTGACAGCCGCCCAGGCAGAACTGGAAAAGGCC...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTTGGTGCAGTCTCCTTTaGTCTTCTCTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAWCSLL*SSLDGL
Trigger: AAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCA...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTATGAAAGCACATCCTaGTCCAGTTGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSYESTS*SSCFRR
Trigger: CCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCATA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCTCCTGTTCCTCCAGCTaGTGTTTGAGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFSCSSS*CLRFSS
Trigger: GCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGA...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPSIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATGCCTGCTCTGCAGAGTaGTGCTGGTTTCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNACSAE*CWFRCS
Trigger: GGAGCATCGAAACCAGCAGCACTCTGCAGAGCAGGC...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCTTGAGCCTGCTCTaGAGAGTGCTGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDSLSLL*RVLLVS
Trigger: CGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHGSAWP*SHCSQT
Trigger: AGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTGGTCTGCTGGGACTaGATGTTCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLVCWD*MFLDGL
Trigger: GAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCTCTGGCGGCGCCGCTaGAATTCAAACCACAGACGC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVLWRRR*NSNHRR
Trigger: GCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATCATGGCTACAGAGGTaGCGACAGCGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTSWLQR*RQRWCL
Trigger: CAGACACCAACGCTGTCGCCACCTCTGTAGCCATGA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGGTCATCTGGTACACTaGGAACAAGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHGHLVH*EQGHCS
Trigger: GCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHAIQVI*YTGNKA
Trigger: GGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTTTTTCCAGTTCTGCCTaGGCGGCTGTCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAFSSSA*AAVTSF
Trigger: AAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGCAGGTCGCCCTCCGTaGCCACAGTCTGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCAGRPP*PQSALR
Trigger: CCTCAGTGCAGACTGTGGCCACGGAGGGCGACCTGC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLARFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSRFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTCMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCTTGCTCAAGCCATCCTaGGCCCCTTCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGLLKPS*APSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAA...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGAAGGGAGAGCTCCCTaGCTTGGGACTGAACTAATG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAEGRAP*LGTELM
Trigger: CATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGAAGGGAGAGCTCCCTaGCTTGGGACTGAACTAATG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAEGRAP*LGTELM
Trigger: CATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQASWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGGGCGGCCATTCTTGCTaGCCCACAGGTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRGGHSC*PTGGGQ
Trigger: CTGGCCACCACCTGTGGGCCAGCAAGAATGGCCGCC...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCCAGCTCTTGACTTGTaGAGCTGGGAGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGPALDL*SWEPLG
Trigger: CCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCAGTGGTGCTGGGTGTaGACCCTTTGTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLQWCWV*TLCSQL
Trigger: GAGCTGGGAACAAAGGGTCCACACCCAGCACCACTG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCAGTGGTGCTGGGTGTaGACCCTTTGTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNQWCWV*TLCSQL
Trigger: GAGCTGGGAACAAAGGGTCCACACCCAGCACCACTG...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTTGCTCAGTGGTGCTaGGTGTGGACCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLAQWC*VWTLCS
Trigger: GGAACAAAGGGTCCACACCCAGCACCACTGAGCAAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCCTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESLPGSA*PCSHCS
Trigger: TGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAG...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGAAGATGACTTTTTCCTaGCGCTTGCTCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRKMTFS*RLLSCK
Trigger: TTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTT...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 72 bp AAGGTCATTTCTTCCCCATCAGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: KVISSPSEPFLG*LKPSWAPSVPH
Trigger: GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 72 bp CAGCTCTTGACTTGTGGAGCTGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAGGAGCCTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QLLTCGAGSLLG*NVHFSKEPLSL
Trigger: CAGGGACAGAGGCTCCTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTCCTCTTTAAGGCACTaGATTAAAGCTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLASSLRH*IKASLL
Trigger: GAGCAAAGAAGCTTTAATTCAGTGCCTTAAAGAGGA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTCTCTGTACTCTTGGTaGGGTTTTGTGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHSLYSW*GFVSAA
Trigger: CGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTAAGCCTTCACTCCTaGGCTCAAGATCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALSLHS*AQDPLQ
Trigger: CTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACCATCCTCCCCAATTTTaGTCGTGTCCTCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDHPPQF*SCPRPP
Trigger: AGGAGGACGAGGACACGATCAAAATTGGGGAGGATG...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSLMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTCCCTGGCTTGGGACTaGACTAATGAATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGSLAWD*TNESYL
Trigger: CAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSSSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCTTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GVLVAELPLSQERESVSFLLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGGAGCCTCTTGGGTTTaGATGTCCATTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEGASWV*MSISAR
Trigger: CCTTGCTGAAATGGACATTCAAACCCAAGAGGCTCC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGCACCTGCACCTTTCTaGCAACAACTCTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAAPAPF*QQLSSQ
Trigger: TTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTAACTGTGGCACTGGCTaGGTACTAAGCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQANCGTG*VLSKSR
Trigger: CCTGGATTTGCTTAGTACTCAGCCAGTGCCACAGTT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTALMSS*SLSWSS
Trigger: GGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGC...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCAGTCTCTCCCTCTCCTaGTGCAAGTCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGSLSLS*CKSLSS
Trigger: GGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGAGTCTCTCCCTCTCCTaGTGCAAGTCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALSLSLS*CKSLSS
Trigger: GGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTGGTGCAGTCTCCTTTaGTCTTCTCTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAWCSLL*SSLDGL
Trigger: AAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPSFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALNHSWA*SSHPGP
Trigger: GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAASFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACCTCCTGGATCAGCTaGTGGTTGTGTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTTSWIS*WLCLSF
Trigger: GAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGATCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRSTRRD*NSLSFC
Trigger: ACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGA...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGCCTGCTCTGCAGAGTaGTGCTGGTTTCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVACSAE*CWFRCS
Trigger: GGAGCATCGAAACCAGCAGCACTCTGCAGAGCAGGC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACCACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFWPCSH*SQTCSV
Trigger: CACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATGGTCATCTGGTACACTaGGAACAAGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNGHLVH*EQGHCS
Trigger: GCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACC...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLAIQVI*YTGNKA
Trigger: GGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTGTTCCGTGCTCTGGTaGGAGACACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQACSVLW*ETLFLL
Trigger: CAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCCTCTTCAAGTGCCTaGATCCTCTCTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSSSSSA*ILSSKL
Trigger: CAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTCTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDALLRSL*FSVLLV
Trigger: CACCAAGAGTACAGAGAACCACAGACTGCGTAGAAG...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAACGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRERFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLCMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACGAAGGGAGAGCTCCCTaGCTTGGGACTGAACTAATG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDEGRAP*LGTELM
Trigger: CATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTC...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTGGGGCACCTCAGGGATaGACACGGCTTGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSGAPQG*TRLGQP
Trigger: TGGCTGTCCAAGCCGTGTCCATCCCTGAGGTGCCCC...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTTGACTTGTGGAGCTaGGAGCCTCTTGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALDLWS*EPLGFE
Trigger: TTCAAACCCAAGAGGCTCCCAGCTCCACAAGTCAAG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSLPGSA*PCSHCS
Trigger: TGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAG...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACTTCCAGGGTCAGCTTaGCCGTGCTCACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLPGSA*PCSHCS
Trigger: TGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCTCCAGGTTTCCTCTaGCCTTCCGAAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAAPGFL*PSEGFC
Trigger: ACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAGACACTGTTTCTTCTaGCACATTTGGGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEARHCFF*HIWEQT
Trigger: GGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCGCCATGGTTAAACCCTaGATGGCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSAMVKP*MALSLF
Trigger: AAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGC...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAGHSLH*GIFQSY
Trigger: GTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCC...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSLICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCTGGCATACTCCCGCTaGAGGTGCTCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKELAYSR*RCSRLT
Trigger: CGTGAGCCTGGAGCACCTTCAGCGGGAGTATGCCAG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAGGAGCCTCTTGGGTTTaGATGTCCATTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTGASWV*MSISAR
Trigger: CCTTGCTGAAATGGACATTCAAACCCAAGAGGCTCC...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAGGAGCCTCTTGGGTTTaGATGTCCATTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPGASWV*MSISAR
Trigger: CCTTGCTGAAATGGACATTCAAACCCAAGAGGCTCC...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCGCACCTGCACCTTTCTaGCAACAACTCTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFAPAPF*QQLSSQ
Trigger: TTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGC...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGCCTGCCCCTGATCTaGAATACAACATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFCLPLI*NTTSKS
Trigger: GCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATGCCTGCCCCTGATCTaGAATACAACATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTCLPLI*NTTSKS
Trigger: GCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTATCCAGGGGAAGACGTaGAGCCCACCAAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCIQGKT*SPPRRT
Trigger: TGTGCGCCTTGGTGGGCTTCACGTCTTCCCCTGGAT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLALMSS*SLSWSS
Trigger: GGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHALMSS*SLSWSS
Trigger: GGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEARSSTC*TFFRAS
Trigger: AGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTAKSPS*IFFISE
Trigger: TTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGC...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCAGGTCCTCTTCAAGTaGCTGGATCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAQVLFK*LDPLFK
Trigger: TTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCCAGGTCCTCTTCAAGTaGCTGGATCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFQVLFK*LDPLFK
Trigger: TTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTG...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAGTCTCTCCCTCTCCTaGTGCAAGTCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSLSLS*CKSLSS
Trigger: GGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACATGCTCTGCGCTGAGTaGAGTGTTGATCGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHMLCAE*SVDRFL
Trigger: GAGAAACCGATCAACACTGCACTCAGCGCAGAGCAT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCTCTGGCCGATGCTCTaGGCTGAGTGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVLWPML*AECSVD
Trigger: ATCAACACTGCACTCAGCGCAGAGCATCGGCCAGAG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKSKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVNHSWA*SSHPGP
Trigger: GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPEKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGACCTCCTGGATCAGCTaGTGGTTGTGTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLTSWIS*WLCLSF
Trigger: GAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCAGCTCCTGGCCGCTaGAGCGGACCTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESAPGR*SGPPGS
Trigger: TGATCCAGGAGGTCCGCTGCAGCGGCCAGGAGCTGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACCTCCTCCTGCACCCTaGTCAGCTCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETPPPAP*SAPGRC
Trigger: GCAGCGGCCAGGAGCTGAGCAGGGTGCAGGAGGAGG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLWPCSH*SQTCSV
Trigger: CACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSGSAWP*SHCSQT
Trigger: AGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVGSAWP*SHCSQT
Trigger: AGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTGGCGCTTGCTCAGCTaGAAAAGCTTCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAWRLLS*KSFMVF
Trigger: AAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTCATGGCTACAGAGGTaGCGACAGCGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSWLQR*RQRWCL
Trigger: CAGACACCAACGCTGTCGCCACCTCTGTAGCCATGA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCGGTCATCTGGTACACTaGGAACAAGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAGHLVH*EQGHCS
Trigger: GCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACC...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCAAGTCACTCAGCTCCTaGGTGATCTTCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAKSLSS*VIFLML
Trigger: AAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTT...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHRRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRVHHVA*KMSWFG
Trigger: TCCAAACCAACTCATTTTCCAAGCCACATGATGAAC...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCCCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPPVQVL*PMLCAE
Trigger: CTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGG...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCGTTTTGTCGGGCGTTaGCCTCCCCTCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCRFVGR*PPLHHC
Trigger: GCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNSWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAGGAGCCTCTGTCCCTaGCTGATCTGTTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVRSLCP*LICLSR
Trigger: CCTGCTCAAACAGATCAGCCAGGGACAGAGGCTCCT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCAAGATGACTTTTTCCTaGCGCTTGCTCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSKMTFS*RLLSCK
Trigger: TTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCTGCATGTTCCTGGATaGGCTCCCCCAGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCLHVPG*APPGLS
Trigger: GCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGGGGACTGCATGTTCCTaGATGGGCTCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRAGTACS*MGSPRP
Trigger: AGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCC...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGGGGACTGCATGTTCCTaGATGGGCTCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMGTACS*MGSPRP
Trigger: AGGCCTGGGGGAGCCCATCCAGGAACATGCAGTCCC...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCAGTGAGGTGGGCATaGTGGCATGTGCCTATAATC +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDSVRWA*WHVPII
Trigger: GATTATAGGCACATGCCACCATGCCCACCTCACTGA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRETQHWG*CHPGHL
Trigger: CAGATGACCTGGATGGCATCAACCCCAATGCTGGGT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTCTCTGTACTCTTGGTaGGGTTTTGTGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSLYSW*GFVSAA
Trigger: CGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTTAAGCCTTCACTCCTaGGCTCAAGATCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLSLHS*AQDPLQ
Trigger: CTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATTTAAGCCTTCACTCCTaGGCTCAAGATCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHLSLHS*AQDPLQ
Trigger: CTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAA...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNLLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHLMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPLMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCATCGTATCTGGGAGGTaGGAGATCTCTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSIVSGR*EISELI
Trigger: AATAAGTTCAGAGATCTCTCACCTCCCAGATACGAT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCCCTGGCTTGGGACTaGACTAATGAATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSLAWD*TNESYL
Trigger: CAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGTTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GVLVAELPLSQERESVSFTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCCCAATCTGCTCACAGTaGAGGGGGCACTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPPICSQ*RGHWPS
Trigger: GGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGG...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTCCGGTGCCTGCCCCTaGTCTGAAATACAACATCCA +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSGACP*SEIQHP
Trigger: TGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAACTGTGGCACTGGCTaGGTACTAAGCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLNCGTG*VLSKSR
Trigger: CCTGGATTTGCTTAGTACTCAGCCAGTGCCACAGTT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCAGGTCCTCTTCAAGTaGCTGGATCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFQVLFK*LDPLFK
Trigger: TTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTATGAAAGCACATCCTaGTCCAGTTGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLYESTS*SSCFRR
Trigger: CCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCATA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAATAATCTCATTACTCTaGTGCAAATGCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRIISLL*CKCWSL
Trigger: GAGTGACCAGCATTTGCAGCAGAGTAATGAGATTAT...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCCCAAGCCTCTCTTGTTaGTTCATGCTTGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: TLLSIISGASGPRIFTCFPSLSC*FMLESQ
Trigger: CTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGG...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGGTTCTCTGGCCGATaGTCTGCGCTGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCRFSGR*SALSAV
Trigger: CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTGCTGTCCTGGTAGGCTaGTCCCACAGGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCAVLVG*SHRGLS
Trigger: GCTCAGCCCCCTGTGGGAGCAGCCTACCAGGACAGC...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTCCTGTTCCTCCAGCTaGTGTTTGAGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSSCSSS*CLRFSS
Trigger: GCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCACAAATTCAGATCCTTaGCGTTCCAACTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSTNSDP*RSNCFR
Trigger: ACGGAAACAGTTGGAACGGCAAGGATCTGAATTTGT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTSFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGCACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTTTTTCCTGGCGCTTaGTCAGCTGCAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLFPGA*SAAKAS
Trigger: TGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATCATGTTCCGTGCTCTaGTGGGAGACACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPSCSVL*WETLFL
Trigger: AAGAAACAGTGTCTCCCACCAGAGCACGGAACATGA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGTGTAGATATGTTCAGTaGGGCCATGAAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPECRYVQ*GHEIPV
Trigger: AACAGGAATTTCATGGCCCCACTGAACATATCTACA...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCTCCTTTTCTTCCCTTaGAGCAGCACAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGLLFFP*SSTKSS
Trigger: CGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAGGAG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLLRSL*FSVLLV
Trigger: CACCAAGAGTACAGAGAACCACAGACTGCGTAGAAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACAAGTCACTCAGCTCCTaGGTGATCTTCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDKSLSS*VIFLML
Trigger: AAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTT...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVLLFSR*ASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQESEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHSNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVSNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTGCAAGCGCAGAGCCTaGATCTCCATCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCCKRRA*ISIRRL
Trigger: CAGCCTCCTGATGGAGATCCAGGCTCTGCGCTTGCA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGAGGAGCCTCTGTCCCTaGCTGATCTGTTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLRSLCP*LICLSR
Trigger: CCTGCTCAAACAGATCAGCCAGGGACAGAGGCTCCT...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCAGTGGTGCTGGGTGTaGACCCTTTGTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCQWCWV*TLCSQL
Trigger: GAGCTGGGAACAAAGGGTCCACACCCAGCACCACTG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAACTTGCTCAGTGGTGCTaGGTGTGGACCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRELAQWC*VWTLCS
Trigger: GGAACAAAGGGTCCACACCCAGCACCACTGAGCAAG...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAAGATGACTTTTTCCTaGCGCTTGCTCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAKMTFS*RLLSCK
Trigger: TTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGGCTCCAGGTTTCCTCTaGCCTTCCGAAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALAPGFL*PSEGFC
Trigger: ACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGC...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAAGCTACATGGAGCATaGAATGGTGTGAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LVAELPLSQERESVSFPEKLHGA*NGVKMQ
Trigger: TTGCATTTTCACACCATTCCATGCTCCATGTAGCTT...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 72 bp CAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTaGTGGAGCACCTGCACCTTTCTGACAACAACTCTC +
Preference number: 4 (lower is better)
Translates to: QHPRARGLFTTR*WSTCTFLTTTL
Trigger: GAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATCTCTGTACTCTTGGTaGGGTTTTGTGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESLYSW*GFVSAA
Trigger: CGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVLLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCLICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALSSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGTCCTTCATGTTCCGTaGTCTGGTGGGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREVLHVP*SGGRHC
Trigger: ACAGTGTCTCCCACCAGAGCACGGAACATGAAGGAC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSRRSST*CTFFRA
Trigger: TGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCATCTCTGAAAGCTTaGTTTCCAAACGCAACCGAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASSLKA*FPNATE
Trigger: TTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATCAGGTCCTCTTCAAGTaGCTGGATCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHQVLFK*LDPLFK
Trigger: TTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTG...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGTCTCTCCCTCTCCTaGTGCAAGTCACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSLSLS*CKSLSS
Trigger: GGAGCTGAGTGACTTGCAGCAGGAGAGGGAGAGACT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGGTGCAGTCTCCTTTaGTCTTCTCTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVWCSLL*SSLDGL
Trigger: AAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEAILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACATCTCATTACTCTGCTaGAAATGCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDISLLC*KCWSLR
Trigger: CCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGAT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACCAAGCCTCTCTTGTTaGTTCATGCTTGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTPSLSC*FMLESQ
Trigger: CTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGGTTCTCTGGCCGATaGTCTGCGCTGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKERFSGR*SALSAV
Trigger: CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGTCCTTCAGCTCCCCCTaGAGCTCCAAGATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRASFSSP*SSKIWL
Trigger: GAGCCAGATCTTGGAGCTGCAGGGGGAGCTGAAGGA...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCACGTATCGCACTTGGTaGAAACTTGAAAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSTYRTW*KLEKVI
Trigger: AATGACCTTTTCAAGTTTGCACCAAGTGCGATACGT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTACAAATTCAGATCCTTaGCGTTCCAACTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQATNSDP*RSNCFR
Trigger: ACGGAAACAGTTGGAACGGCAAGGATCTGAATTTGT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGACAAATTCAGATCCTTaGCGTTCCAACTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQETNSDP*RSNCFR
Trigger: ACGGAAACAGTTGGAACGGCAAGGATCTGAATTTGT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTGTGAGAGCAGCTGCTaGCTCAACTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCCESSC*LNFTSS
Trigger: GGAGGAGGTGAAGTTGAGGCAGCAGCTGCTCTCACA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGATGCTCCTTTCTAGTTaGAAGCGCAGAGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSMLLSS*KRRAWI
Trigger: GATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCAT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTCCTTGAGCCTGCTCTaGAGAGTGCTGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSLSLL*RVLLVS
Trigger: CGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLWPCSH*SQTCSV
Trigger: CACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCA...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp GACTCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCGGGTCAGCTTGGCCGTaGTCACACTGCTCACAAACT +
Preference number: 4 (lower is better)
Translates to: DSVCLKYPFLQPPLERSFGSAWP*SHCSQT
Trigger: AGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCC...GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCTTTTTCCTGGCGCTTaGTCAGCTGCAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNLFPGA*SAAKAS
Trigger: TGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAG...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGTGTTCCGTGCTCTGGTaGGAGACACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSCSVLW*ETLFLL
Trigger: CAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACA...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCATGTTCCGTGCTCTaGTGGGAGACACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSCSVL*WETLFL
Trigger: AAGAAACAGTGTCTCCCACCAGAGCACGGAACATGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTTTTCCAGTTCTGCCTaGGCGGCTGTCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVFSSSA*AAVTSF
Trigger: AAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACTCCTTTTCTTCCCTTaGAGCAGCACAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLLFFP*SSTKSS
Trigger: CGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAGGAG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGTCCTCTTCAAGTGCCTaGATCCTCTCTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALSSSSA*ILSSKL
Trigger: CAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGA...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGGTTAAACCCTGAATaGCTTTATCCCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSWLNPE*LYPSLD
Trigger: GTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTGATTTTAATGCCATaGTTAAACCCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLILMP*LNPEWL
Trigger: AAGCCATTCAGGGTTTAACCATGGCATTAAAATCAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATCTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNLLRSL*FSVLLV
Trigger: CACCAAGAGTACAGAGAACCACAGACTGCGTAGAAG...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKLLFSR*ASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDRRDQK*FSSGAG
Trigger: ACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCT...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTRRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVRRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACCCGTGCAGGTTCTCTaGCCGATGCTCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETPVQVL*PMLCAE
Trigger: CTCAGCGCAGAGCATCGGCCAGAGAACCTGCACGGG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKSPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSCMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTSISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQESLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTSLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGGGATGGACACGGCTTaGACAGCCAGAGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNGMDTA*TARVRA
Trigger: AGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCC...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCCTGGCCCACAGGTGGTaGCCAGTGACCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLLAHRW*PVTRRD
Trigger: GTCCCGCCTGGTCACTGGCCACCACCTGTGGGCCAG...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCCAGCTCTTGACTTGTaGAGCTGGGAGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNPALDL*SWEPLG
Trigger: CCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTTTACCACCCGTTTGTaGAGCACCTGCACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVFTTRL*STCTFL
Trigger: CAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAAGACACTGTTTCTTCTaGCACATTTGGGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPRHCFF*HIWEQT
Trigger: GGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTCCTCTTTAAGGCACTaGATTAAAGCTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQASSLRH*IKASLL
Trigger: GAGCAAAGAAGCTTTAATTCAGTGCCTTAAAGAGGA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCCTCTTTAAGGCACTaGATTAAAGCTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEASSLRH*IKASLL
Trigger: GAGCAAAGAAGCTTTAATTCAGTGCCTTAAAGAGGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAACTGTTTCTCTCCTTCTaGTGCTCCATTTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRELFLSF*CSICAA
Trigger: GGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAG...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGCTGTTTCTCTCCTTCTaGTGCTCCATTTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLLFLSF*CSICAA
Trigger: GGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAG...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATGCCATGGTTAAACCCTaGATGGCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNAMVKP*MALSLF
Trigger: AAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGC...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGCTGCCTGGTGGCTGTTaGGAAGAGCACTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLLPGGC*EEHFSV
Trigger: AACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAG...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 4 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRELLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCATCGTATCTGGGAGGTaGGAGATCTCTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFIVSGR*EISELI
Trigger: AATAAGTTCAGAGATCTCTCACCTCCCAGATACGAT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCATCGTATCTGGGAGGTaGGAGATCTCTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPIVSGR*EISELI
Trigger: AATAAGTTCAGAGATCTCTCACCTCCCAGATACGAT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTATCGTATCTGGGAGGTaGGAGATCTCTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSIVSGR*EISELI
Trigger: AATAAGTTCAGAGATCTCTCACCTCCCAGATACGAT...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKELICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACCAATCTGCTCACAGTaGAGGGGGCACTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETPICSQ*RGHWPS
Trigger: GGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GACTCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCGTCCTTCATGTTCCGTaGTCTGGTGGGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: DSVCLKYPFLQPPLERSFVLHVP*SGGRHC
Trigger: ACAGTGTCTCCCACCAGAGCACGGAACATGAAGGAC...GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCALMSS*SLSWSS
Trigger: GGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAAAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKRRSST*CTFFRA
Trigger: TGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCT...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAGGCCTTTTCCAGTTCTaGCTGGGCGGCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIGLFQF*LGGCHI
Trigger: GATGTGACAGCCGCCCAGGCAGAACTGGAAAAGGCC...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCATCTCTGAAAGCTTaGTTTCCAAACGCAACCGAA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSSLKA*FPNATE
Trigger: TTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREAKSPS*IFFISE
Trigger: TTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLAKSPS*IFFISE
Trigger: TTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGC...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACATTCTCATCAGGACATaGCATCTGAGATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHILIRT*HLRFLL
Trigger: GAGGAGAAATCTCAGATGGCATGTCCTGATGAGAAT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCCTGATGCTCCATTTGTaGAGCCTCAGTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLALMLHL*SLSFSL
Trigger: GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAG...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACAGGTCCTCTTCAAGTaGCTGGATCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPQVLFK*LDPLFK
Trigger: TTTGAAGAGAGGATCCAGGCACTTGAAGAGGACCTG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATGGTGCAGTCTCCTTTaGTCTTCTCTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREWCSLL*SSLDGL
Trigger: AAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALLCCK*WSLRKL
Trigger: TAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTLLCCK*WSLRKL
Trigger: TAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCCAAGCCTCTCTTGTTaGTTCATGCTTGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLPSLSC*FMLESQ
Trigger: CTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTACGTATCGCACTTGGTaGAAACTTGAAAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQATYRTW*KLEKVI
Trigger: AATGACCTTTTCAAGTTTGCACCAAGTGCGATACGT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGACGTATCGCACTTGGTaGAAACTTGAAAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTTYRTW*KLEKVI
Trigger: AATGACCTTTTCAAGTTTGCACCAAGTGCGATACGT...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLSIISGASGPRIFTCFTCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTACAAATTCAGATCCTTaGCGTTCCAACTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSTNSDP*RSNCFR
Trigger: ACGGAAACAGTTGGAACGGCAAGGATCTGAATTTGT...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLSTRRD*NSLSFC
Trigger: ACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNSTRRD*NSLSFC
Trigger: ACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATTCCCTGAAAGGATCCTaGCCCTTCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNSLKGS*PFQPSP
Trigger: GGGAGAAGGCTGGAAGGGGCAGGATCCTTTCAGGGA...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGTCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMSIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAAATGCTCCTTTCTAGTTaGAAGCGCAGAGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKMLLSS*KRRAWI
Trigger: GATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCAT...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCCATGGCGGCCATTCTTaGTGGCCCACAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSHGGHS*WPTGGG
Trigger: GCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATG...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATGGCGCTTGCTCAGCTaGAAAAGCTTCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPWRLLS*KSFMVF
Trigger: AAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVRLWST*TFLTTT
Trigger: AGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTCTTGTTCAGACTCTaGCGGCGCCGCTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLLFRL*RRRWNS
Trigger: TGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTACACCAAGTCCATCATaGCTACAGAGGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCTPSPS*LQRWRQ
Trigger: CTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGGTCATCTGGTACACTaGGAACAAGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEGHLVH*EQGHCS
Trigger: GCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTCATGTTCCGTGCTCTaGTGGGAGACACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSSCSVL*WETLFL
Trigger: AAGAAACAGTGTCTCCCACCAGAGCACGGAACATGA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATCCTCTTCAAGTGCCTaGATCCTCTCTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPSSSSA*ILSSKL
Trigger: CAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTTGATTTTAATGCCATaGTTAAACCCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAALILMP*LNPEWL
Trigger: AAGCCATTCAGGGTTTAACCATGGCATTAAAATCAA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAAGTCACTCAGCTCCTaGGTGATCTTCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTKSLSS*VIFLML
Trigger: AAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCLLFSR*ASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERRDQK*FSSGAG
Trigger: ACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATC +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLCCKC*SLRKLI
Trigger: GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVVHHVA*KMSWFG
Trigger: TCCAAACCAACTCATTTTCCAAGCCACATGATGAAC...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRSPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCTGCGTCACCACCTCCTaGGTGGCAGGGAGACGATAC +
Preference number: 4 (lower is better)
Translates to: NLITLLQMLVTQEINLVICVTTS*VAGRRY
Trigger: GTATCGTCTCCCTGCCACCCAGGAGGTGGTGACGCA...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTCCTGGATCAGCTGCTaGTTGTGTCTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSWISC*LCLSFS
Trigger: CGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAACTTGACTTGTGGAGCTaGGAGCCTCTTGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRELDLWS*EPLGFE
Trigger: TTCAAACCCAAGAGGCTCCCAGCTCCACAAGTCAAG...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCCTTGCTCAGTGGTGCTaGGTGTGGACCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPLAQWC*VWTLCS
Trigger: GGAACAAAGGGTCCACACCCAGCACCACTGAGCAAG...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGCTCCAGGTTTCCTCTaGCCTTCCGAAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREAPGFL*PSEGFC
Trigger: ACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACTGCATGTTCCTGGATaGGCTCCCCCAGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETLHVPG*APPGLS
Trigger: GCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTTCAAACTGTGGCACTaGCTGAGTACTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFFKLWH*LSTKQI
Trigger: GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
3UTR CAA 72 bp TCACTCAGGAAATTAATCTCGTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCCTTGCTAGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLRKLISSSSPI*IVSSSSLLARS
Trigger: GCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGAGATTAATTTCCTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACTTGGTGAGGTTTTGTaGGCGCAGCGCAGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETLGEVL*AQRSRK
Trigger: CTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCTGCCTGGTGGCTGTTaGGAAGAGCACTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCLPGGC*EEHFSV
Trigger: AACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTATGTGGCCTTCTCATTaGACAAAGGGGCAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSMWPSH*TKGQAG
Trigger: ACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACAT...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTTGTTGCTTCATGCTTaGATCTCAGCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRLLLHA*ISAGRP
Trigger: AGGGCGACCTGCTGAGATTCAAGCATGAAGCAACAA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGTTTGAAGCTGAAATATaGAATTCTGGTAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVFEAEI*NSGSLP
Trigger: TGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAA...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGAGCGCATGAGAGGCTaGAGGCTCAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETERMRG*RLRRFR
Trigger: CCTGAATCTCCTGAGCCTTCAGCCTCTCATGCGCTC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATGATGTTAGAGAACTATaGAGCTCTGAACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNDVREL*SSEPEA
Trigger: TGCTTCTGGTTCAGAGCTTCATAGTTCTCTAACATC...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGATGTTAGAGAACTATaGAGCTCTGAACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHDVREL*SSEPEA
Trigger: TGCTTCTGGTTCAGAGCTTCATAGTTCTCTAACATC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATCGTGTTTGTCAGGCTaGAGGGGCACCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETSCLSG*RGTSGM
Trigger: CATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETAILGE*DSPEKL
Trigger: AAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCAILGE*DSPEKL
Trigger: AAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGC...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCCGGTGCCTGCCCCTaGTCTGAAATACAACATCCA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSGACP*SEIQHP
Trigger: TGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGATCAGGAACAATCAGTaGGGTGGGCATGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRAIRNNQ*GGHGGM
Trigger: CATGCCACCATGCCCACCTCACTGATTGTTCCTGAT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGTCCTTCATGTTCCGTaGTCTGGTGGGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNVLHVP*SGGRHC
Trigger: ACAGTGTCTCCCACCAGAGCACGGAACATGAAGGAC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGTCCTTCATGTTCCGTaGTCTGGTGGGAGACACTGT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEVLHVP*SGGRHC
Trigger: ACAGTGTCTCCCACCAGAGCACGGAACATGAAGGAC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAAAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKRSSTC*TFFRAS
Trigger: AGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCT...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCRRSST*CTFFRA
Trigger: TGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTGGTGCAGTCTCCTTTaGTCTTCTCTCGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRWCSLL*SSLDGL
Trigger: AAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHLFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPLFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTATGAAAGCACATCCTaGTCCAGTTGCTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRYESTS*SSCFRR
Trigger: CCTGCGGAAGCAACTGGAGCAGGATGTGCTTTCATA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLLCCK*WSLRKL
Trigger: TAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAATCTCATTACTCTGCTaGAAATGCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPISLLC*KCWSLR
Trigger: CCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGAT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDSPETS*SVKNSC
Trigger: ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTATGCTCTGCGCTGAGTaGAGTGTTGATCGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSMLCAE*SVDRFL
Trigger: GAGAAACCGATCAACACTGCACTCAGCGCAGAGCAT...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCCTGTTCCTCCAGCTaGTGTTTGAGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSCSSS*CLRFSS
Trigger: GCTGGAGAACCTCAAACAGCAGCTGGAGGAACAGGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATACAAATTCAGATCCTTaGCGTTCCAACTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHTNSDP*RSNCFR
Trigger: ACGGAAACAGTTGGAACGGCAAGGATCTGAATTTGT...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPSFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTATGCTCCTTTCTAGTTaGAAGCGCAGAGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCMLLSS*KRRAWI
Trigger: GATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCAT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCATGGCGGCCATTCTTaGTGGCCCACAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIHGGHS*WPTGGG
Trigger: GCCACCACCTGTGGGCCAGCAAGAATGGCCGCCATG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATGGCGCTTGCTCAGCTaGAAAAGCTTCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREWRLLS*KSFMVF
Trigger: AAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGTGGCGCTTGCTCAGCTaGAAAAGCTTCATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLWRLLS*KSFMVF
Trigger: AAACACCATGAAGCTTTTGCAGCTGAGCAAGCGCCA...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTCTGGTCTGCTGGGACTaGATGTTCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCLVCWD*MFLDGL
Trigger: GAGCCCATCCAGGAACATGCAGTCCCAGCAGACCAG...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACCAAGTCCATCATaGCTACAGAGGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKETPSPS*LQRWRQ
Trigger: CTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTACACCAAGTCCATCATaGCTACAGAGGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSTPSPS*LQRWRQ
Trigger: CTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGT...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIAIQVI*YTGNKA
Trigger: GGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGC...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTGTTCCGTGCTCTGGTaGGAGACACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCCSVLW*ETLFLL
Trigger: CAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTGTTCCGTGCTCTGGTaGGAGACACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSCSVLW*ETLFLL
Trigger: CAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATCATGTTCCGTGCTCTaGTGGGAGACACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESCSVL*WETLFL
Trigger: AAGAAACAGTGTCTCCCACCAGAGCACGGAACATGA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCATGTAGATATGTTCAGTaGGGCCATGAAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPCRYVQ*GHEIPV
Trigger: AACAGGAATTTCATGGCCCCACTGAACATATCTACA...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTATGGTTAAACCCTGAATaGCTTTATCCCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVWLNPE*LYPSLD
Trigger: GTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCA...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAAGTCACTCAGCTCCTaGGTGATCTTCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLKSLSS*VIFLML
Trigger: AAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKELLFSR*ASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMLLFSR*ASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAA...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGATGGTTTTGCTGCCTaGTGGCTGTTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCDGFAA*WLLRRA
Trigger: TGCTCTTCTCAACAGCCACCAGGCAGCAAAACCATC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLCCKC*SLRKLI
Trigger: GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCCTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATC +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGLCCKC*SLRKLI
Trigger: GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAG...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLASEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCACCACCTCCTGGGTaGCAGGGAGACGATACATAT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESPPPG*QGDDTY
Trigger: ATATGTATCGTCTCCCTGCCACCCAGGAGGTGGTGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCCSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCTTGACTTGTGGAGCTaGGAGCCTCTTGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCLDLWS*EPLGFE
Trigger: TTCAAACCCAAGAGGCTCCCAGCTCCACAAGTCAAG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGAAGATGACTTTTTCCTaGCGCTTGCTCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSKMTFS*RLLSCK
Trigger: TTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAGAATCTTCAAACTGTaGCACTGGCTGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLRIFKL*HWLSTK
Trigger: CTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGACATGGAGCATGGAATaGTGTGAAAATGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALTWSME*CENATQ
Trigger: TTGGGTTGCATTTTCACACCATTCCATGCTCCATGT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCTGTTTCTCTCCTTCTaGTGCTCCATTTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKELFLSF*CSICAA
Trigger: GGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTGTTTCTCTCCTTCTaGTGCTCCATTTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLFLSF*CSICAA
Trigger: GGCTGCACAAATGGAGCATCAGAAGGAGAGAAACAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGCCATGGTTAAACCCTaGATGGCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREAMVKP*MALSLF
Trigger: AAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGTTAAGCCTTCACTCCTaGGCTCAAGATCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRALSLHS*AQDPLQ
Trigger: CTGCAGAGGATCTTGAGCTCAGGAGTGAAGGCTTAA...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCGTTGTTGATACTGTCTaGTTCCTGCAGAGATTTGAC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAVVDTV*FLQRFD
Trigger: GTCAAATCTCTGCAGGAATCAGACAGTATCAACAAC...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCCGCAAATTCTGATATaGAAGCACATCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCPQILI*KHILLQ
Trigger: CTGGAGCAGGATGTGCTTTCATATCAGAATTTGCGG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCATGTGGCTTGGAAAATaGGTTGGTTTGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESMWLGK*VGLDKM
Trigger: CATTTTGTCCAAACCAACTCATTTTCCAAGCCACAT...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTATCGTATCTGGGAGGTaGGAGATCTCTGAACTTATT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSIVSGR*EISELI
Trigger: AATAAGTTCAGAGATCTCTCACCTCCCAGATACGAT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGATGTTAGAGAACTATaGAGCTCTGAACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSDVREL*SSEPEA
Trigger: TGCTTCTGGTTCAGAGCTTCATAGTTCTCTAACATC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCCAATCTGCTCACAGTaGAGGGGGCACTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIPICSQ*RGHWPS
Trigger: GGATGGCCAGTGCCCCCTTCACTGTGAGCAGATTGG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGCACCTGCACCTTTCTaGCAACAACTCTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEAPAPF*QQLSSQ
Trigger: TTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNRRSST*CTFFRA
Trigger: TGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTATTCTCATCAGGACATaGCATCTGAGATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVILIRT*HLRFLL
Trigger: GAGGAGAAATCTCAGATGGCATGTCCTGATGAGAAT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGATTCTCATCAGGACATaGCATCTGAGATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSILIRT*HLRFLL
Trigger: GAGGAGAAATCTCAGATGGCATGTCCTGATGAGAAT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GACTCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCCTGATGCTCCATTTGTaGAGCCTCAGTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DSVCLKYPFLQPPLERSFLMLHL*SLSFSL
Trigger: GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAG...GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNLFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCAGCTCAGCACATTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATATAATCTCATTACTCTaGTGCAAATGCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: AAQHIDSAVPGNPRPHSNIISLL*CKCWSL
Trigger: GAGTGACCAGCATTTGCAGCAGAGTAATGAGATTAT...ATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLALQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAAACCATTCTTGGGCTTaGTCAAGCCATCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETNHSWA*SSHPGP
Trigger: GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAAATTCTGCTCCTTCTaGAGCTTGTATTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVKFCSF*SLYSCS
Trigger: GGAACAGGAATACAAGCTGCAGAAGGAGCAGAATTT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAACCTCCTGGATCAGCTaGTGGTTGTGTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFITSWIS*WLCLSF
Trigger: GAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATGTGAGAGCAGCTGCTaGCTCAACTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETCESSC*LNFTSS
Trigger: GGAGGAGGTGAAGTTGAGGCAGCAGCTGCTCTCACA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGATGCTCCTTTCTAGTTaGAAGCGCAGAGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEMLLSS*KRRAWI
Trigger: GATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCAT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTGCTCTGCAGAGTGCTaGTGGTTTCGATGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNCSAEC*WFRCSF
Trigger: AAAGGAGCATCGAAACCAGCAGCACTCTGCAGAGCA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATATGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIWPCSH*SQTCSV
Trigger: CACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCA...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCTCTGGCGGCGCCGCTaGAATTCAAACCACAGACGC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILWRRR*NSNHRR
Trigger: GCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGGTCATCTGGTACACTaGGAACAAGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETGHLVH*EQGHCS
Trigger: GCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: NLITLLQMLVTQEINLVIAIQVI*YTGNKA
Trigger: GGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGC...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTGTTCCGTGCTCTGGTaGGAGACACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNCSVLW*ETLFLL
Trigger: CAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTGGTTAAACCCTGAATaGCTTTATCCCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLWLNPE*LYPSLD
Trigger: GTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTGATTTTAATGCCATaGTTAAACCCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALILMP*LNPEWL
Trigger: AAGCCATTCAGGGTTTAACCATGGCATTAAAATCAA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTGATTTTAATGCCATaGTTAAACCCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: STPVPAPDLKYNIQELEALILMP*LNPEWL
Trigger: AAGCCATTCAGGGTTTAACCATGGCATTAAAATCAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGTGCTCCAGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTTGTCATTCTACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: GAPGSRSSWRGTLVICHSTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...AGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCTGGAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGGGTTTTGCTGCCTGGTaGCTGTTGAGAAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMGFAAW*LLRRAL
Trigger: AAGTGCTCTTCTCAACAGCCACCAGGCAGCAAAACC...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLRRDQK*FSSGAG
Trigger: ACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCCTCTGCTGCAAATGCTaGTCACTCAGGAAATTAATC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLALCCKC*SLRKLI
Trigger: GATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAG...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCCTGCCTTTACTAGCTaGGCCTCACAAGACAACTTC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEPAFTS*ASQDNF
Trigger: GAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTTCACGTATCGCACTTaGTGCAAACTTGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSFTYRT*CKLEKV
Trigger: GACCTTTTCAAGTTTGCACCAAGTGCGATACGTGAA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAGAAGGGAGAGCTCCCTaGCTTGGGACTGAACTAATG +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIEGRAP*LGTELM
Trigger: CATTAGTTCAGTCCCAAGCCAGGGAGCTCTCCCTTC...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAATTATCACTTTCCATaGGATATTTGTCACCATCGT +
Preference number: 4 (lower is better)
Translates to: RTASTPVPAPDLKYNIQENYHFP*DICHHR
Trigger: ACGATGGTGACAAATATCCCATGGAAAGTGATAATT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGCTTGACTTGTGGAGCTaGGAGCCTCTTGGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMLDLWS*EPLGFE
Trigger: TTCAAACCCAAGAGGCTCCCAGCTCCACAAGTCAAG...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGCTCCAGGTTTCCTCTaGCCTTCCGAAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEAPGFL*PSEGFC
Trigger: ACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTTTACCACCCGTTTGTaGAGCACCTGCACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNFTTRL*STCTFL
Trigger: CAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTAATTATCACTTTCCATaGGATATTTGTCACCATCTC +
Preference number: 4 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQANYHFP*DICHHL
Trigger: GAGATGGTGACAAATATCCCATGGAAAGTGATAATT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360190.8
3UTR CAA 72 bp CAACTCCTCAAATGCCTTAATCATGGTGTTCATGTGTaGACGGGAGATGACACAGATGCCATGGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: QLLKCLNHGVHV*TGDDTDAMAIL
Trigger: AAGGATGGCCATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTTGAGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTCCTCTTTAAGGCACTaGATTAAAGCTTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLASSLRH*IKASLL
Trigger: GAGCAAAGAAGCTTTAATTCAGTGCCTTAAAGAGGA...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACATCCTCCCCAATTTTaGTCGTGTCCTCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETHPPQF*SCPRPP
Trigger: AGGAGGACGAGGACACGATCAAAATTGGGGAGGATG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCCCTGGCTTGGGACTaGACTAATGAATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESLAWD*TNESYL
Trigger: CAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGCAGCTCAGCACATTaGTTCAGCTGTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESSSAH*FSCSWK
Trigger: TTTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: GFSSQASLVASCLNLSRSRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTTGCCAGCTGTTCCTTaGGCCTGCTCTGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILPAVP*ACSAEC
Trigger: GCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGCCATCCTCGGGGAGTaGGACTCTCCAGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIAILGE*DSPEKL
Trigger: AAGCTTCTCTGGAGAGTCTCACTCCCCGAGGATGGC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCALMSS*SLSWSS
Trigger: GGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGC...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKERSSTC*TFFRAS
Trigger: AGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNRSSTC*TFFRAS
Trigger: AGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGGCCTTTTCCAGTTCTaGCTGGGCGGCTGTCACATC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIGLFQF*LGGCHI
Trigger: GATGTGACAGCCGCCCAGGCAGAACTGGAAAAGGCC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAATTCTCATCAGGACATaGCATCTGAGATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREILIRT*HLRFLL
Trigger: GAGGAGAAATCTCAGATGGCATGTCCTGATGAGAAT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTGATGCTCCATTTGTaGAGCCTCAGTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLMLHL*SLSFSL
Trigger: GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSLFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCTTAAGTATCCATTTTTaGAGCCTCCTTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LIQLFLETLGHTVIHITGLSIHF*SLLWKG
Trigger: ACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAA...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCACAAGTTCACCTTTTTaGTTAGGTGTCTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESTSSPF*LGVFSV
Trigger: AACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGT...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTCCAAGATCTGGCTCTaGAGCTGCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLSKIWL*SCVTTS
Trigger: GGAGGTGGTGACGCAGCTGCAGAGCCAGATCTTGGA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGGTTTTAATTCCTTTCTaGTCTCCTGGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEVLIPF*SPGLSW
Trigger: CCAGGACAGCCCAGGAGAGCAGAAAGGAATTAAAAC...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp ATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTTGCTCTGCAGAGTGCTaGTGGTTTCGATGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IWKPISLETHAGEIKNGFCSAEC*WFRCSF
Trigger: AAAGGAGCATCGAAACCAGCAGCACTCTGCAGAGCA...AAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTTTTTCCTGGCGCTTaGTCAGCTGCAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLFPGA*SAAKAS
Trigger: TGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCGTTTGTGGAGCACCTaGACCTTTCTGACAACAACT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKERLWST*TFLTTT
Trigger: AGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGATATGTTCAGTaGGGCCATGAAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: APDLKYNIQELEAFLPPVCRYVQ*GHEIPV
Trigger: AACAGGAATTTCATGGCCCCACTGAACATATCTACA...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTGTAGATATGTTCAGTaGGGCCATGAAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSCRYVQ*GHEIPV
Trigger: AACAGGAATTTCATGGCCCCACTGAACATATCTACA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLLRSL*FSVLLV
Trigger: CACCAAGAGTACAGAGAACCACAGACTGCGTAGAAG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAAAGTCACTCAGCTCCTaGGTGATCTTCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREKSLSS*VIFLML
Trigger: AAGCATTAAGAAGATCACCCAGGAGCTGAGTGACTT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCRRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCAGGCAGCCAGGTGCGTaGGCCCCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIRQPGA*APSQSE
Trigger: TTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSSEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPVHHVA*KMSWFG
Trigger: TCCAAACCAACTCATTTTCCAAGCCACATGATGAAC...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTGCAGCTCCAAGATCTaGCTCTGCAGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQICSSKI*LCSCVT
Trigger: GGTGACGCAGCTGCAGAGCCAGATCTTGGAGCTGCA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGAGTAATCCACATCACTaGCCTGCAGCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMSNPHH*PAATPQ
Trigger: TTGAGGAGTTGCTGCAGGCCAGTGATGTGGATTACT...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKSISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCCTGCAGCGGACCTCCTaGATCAGCTGCTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLLQRTS*ISCWLC
Trigger: ACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAG...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCCAGCTCTTGACTTGTaGAGCTGGGAGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIPALDL*SWEPLG
Trigger: CCCAAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCHKLAQ*CWVWTL
Trigger: AAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTG...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTCTGCATGTTCCTGGATaGGCTCCCCCAGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISLHVPG*APPGLS
Trigger: GCTTAGGCCTGGGGGAGCCCATCCAGGAACATGCAG...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 72 bp AGGCTCACGGTCTTCCTGGAGAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTATCTCTGGATCCTTTA +
Preference number: 4 (lower is better)
Translates to: RLTVFLERDSRN*SFSFCLSLDPL
Trigger: TAAAGGATCCAGAGATAAACAGAAGGAGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTGGCCCCATCACAATCTaGAATCTTAGACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCGPITI*NLRLRV
Trigger: CACACGGAGTCTAAGATTTCAGATTGTGATGGGGCC...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGGGCAAGCAGGTTTATaGATGCACCTTCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETGQAGL*MHLLLG
Trigger: GCCTAGAAGAAGGTGCATTCATAAACCTGCTTGCCC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIGHSLH*GIFQSY
Trigger: GTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCGGCCACAGTCTGCACTaGGGCATCTTTCAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLGHSLH*GIFQSY
Trigger: GTAGGACTGAAAGATGCCTCAGTGCAGACTGTGGCC...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTTGAAGCTGAAATATaGAATTCTGGTAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPFEAEI*NSGSLP
Trigger: TGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTTAATCTGCTGCCGTTaGAGGGAGAGCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLLICCR*RESSLA
Trigger: AGCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQREMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGATGTTAGAGAACTATaGAGCTCTGAACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCDVREL*SSEPEA
Trigger: TGCTTCTGGTTCAGAGCTTCATAGTTCTCTAACATC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGCCAATTGATCAAAGATaGCTTTTTCCTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRAPIDQR*LFPGAC
Trigger: GCAAGCGCCAGGAAAAAGTCATCTTTGATCAATTGG...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNRSSTC*TFFRAS
Trigger: AGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCT...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTCATCTCTGAAAGCTTaGTTTCCAAACGCAACCGAA +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSSSLKA*FPNATE
Trigger: TTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTTCCCTGGAAACCCATaGAGGAGAGATCAAAAATGG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNFPGNP*RRDQKW
Trigger: CCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTATCTCATTACTCTGCTaGAAATGCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSISLLC*KCWSLR
Trigger: CCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGAT...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESPETS*SVKNSC
Trigger: ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGTCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSCFRRAKILFNSACRLLSPETS*SVKNSC
Trigger: ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGA...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAATGCTCTGCGCTGAGTaGAGTGTTGATCGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETMLCAE*SVDRFL
Trigger: GAGAAACCGATCAACACTGCACTCAGCGCAGAGCAT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTATGCTCTGCGCTGAGTaGAGTGTTGATCGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCMLCAE*SVDRFL
Trigger: GAGAAACCGATCAACACTGCACTCAGCGCAGAGCAT...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTAGGTTCTCTGGCCGATaGTCTGCGCTGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISRFSGR*SALSAV
Trigger: CACTGCACTCAGCGCAGAGCATCGGCCAGAGAACCT...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AGTGATGTCTCTGTTTGTTCTGTAGACGCAAGTCTATCTGGAAACCCATTTCCCTCGCTGCCTTCTTTCTaGAGCCTTTCATTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SDVSVCSVDASLSGNPFPSLPSF*SLSFSS
Trigger: GGAAGAAAATGAAAGGCTGCAGAAAGAAGGCAGCGA...GGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGACATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESTRRD*NSLSFC
Trigger: ACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCCATCAGGAGGCTGTaGAGGTCCCTGAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISIRRL*RSLKGS
Trigger: GGATCCTTTCAGGGACCTGCACAGCCTCCTGATGGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATGCTCTGCAGAGTGCTaGTGGTTTCGATGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETCSAEC*WFRCSF
Trigger: AAAGGAGCATCGAAACCAGCAGCACTCTGCAGAGCA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR GCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTTGCTCTGCAGAGTGCTaGTGGTTTCGATGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCCSAEC*WFRCSF
Trigger: AAAGGAGCATCGAAACCAGCAGCACTCTGCAGAGCA...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCCTTGAGCCTGCTCTaGAGAGTGCTGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISLSLL*RVLLVS
Trigger: CGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCACACCAAGTCCATCATaGCTACAGAGGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSTPSPS*LQRWRQ
Trigger: CTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATGTAGATATGTTCAGTaGGGCCATGAAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VEHLHLSDNNSQANFQRECRYVQ*GHEIPV
Trigger: AACAGGAATTTCATGGCCCCACTGAACATATCTACA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATTTTCCAGTTCTGCCTaGGCGGCTGTCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETFSSSA*AAVTSF
Trigger: AAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACTCCTTTTCTTCCCTTaGAGCAGCACAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETLLFFP*SSTKSS
Trigger: CGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAGGAG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACACGTCCTTCTGATTaGTACTTTCTGTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPTRPSD*YFLLDV
Trigger: AACATCTAACAGAAAGTACCAATCAGAAGGACGTGT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKERRKSI*KPISLE
Trigger: TTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCAGAAGGTCTGGCCTaGATTCCAGTAATAATGTGG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESEGLA*IPVIMW
Trigger: CCACATTATTACTGGAATCCAGGCCAGACCTTCTGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQICMMAS*QGHQVG
Trigger: GCCCACCTGATGACCTTGCCAGCTTGCCATCATGCA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTGCTGTCAATCATCTCTaGGGCCAGCGGACCGAGGAT +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISAVNHL*GQRTED
Trigger: ATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGC...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTCCATCAGTTCATTCTaGGTGTTCATTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSISSF*VFISTP
Trigger: TGGAGTGGAAATGAACACCCAGAATGAACTGATGGA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCSLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAAGATGACTTTTTCCTaGCGCTTGCTCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEKMTFS*RLLSCK
Trigger: TTTGCAGCTGAGCAAGCGCCAGGAAAAAGTCATCTT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAAGACACTGTTTCTTCTaGCACATTTGGGAGCAGACC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETRHCFF*HIWEQT
Trigger: GGTCTGCTCCCAAATGTGTCAGAAGAAACAGTGTCT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTCTCTGTACTCTTGGTaGGGTTTTGTGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLSLYSW*GFVSAA
Trigger: CGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTTTAATGCTCTCTGACTaGTCAGTCCCCATCACACTG +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCLMLSD*SVPITL
Trigger: CAGTGTGATGGGGACTGATCAGTCAGAGAGCATTAA...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATTTGAAGCTGAAATATaGAATTCTGGTAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKFEAEI*NSGSLP
Trigger: TGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCCGGTGCCTGCCCCTaGTCTGAAATACAACATCCA +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISGACP*SEIQHP
Trigger: TGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTAGACACTGTTTCTTCTaGCACATTTGGGAGCACATT +
Preference number: 4 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSRHCFF*HIWEHI
Trigger: AATGTGCTCCCAAATGTGTCAGAAGAAACAGTGTCT...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSRRSST*CTFFRA
Trigger: TGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACTGATGCTCCATTTGTaGAGCCTCAGTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETLMLHL*SLSFSL
Trigger: GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACATACTGTCTGATTCCTaGAGAGATTTGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNILSDS*RDLTRW
Trigger: CCATCTGGTCAAATCTCTGCAGGAATCAGACAGTAT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTATAATCTCATTACTCTaGTGCAAATGCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCIISLL*CKCWSL
Trigger: GAGTGACCAGCATTTGCAGCAGAGTAATGAGATTAT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTACACGGAGTGCTAGTTaGCGAACTGCCACTGTCGCA +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISTRSAS*RTATVA
Trigger: TGCGACAGTGGCAGTTCGGCAACTAGCACTCCGTGT...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCACTGCTCACAAACTTaGTCAGTGGTGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIHCSQT*SVVLGV
Trigger: CACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCACACCAAGTCCATCATaGCTACAGAGGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQITPSPS*LQRWRQ
Trigger: CTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTGGTTAAACCCTGAATaGCTTTATCCCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSWLNPE*LYPSLD
Trigger: GTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTGATTTTAATGCCATaGTTAAACCCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLILMP*LNPEWL
Trigger: AAGCCATTCAGGGTTTAACCATGGCATTAAAATCAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETLLRSL*FSVLLV
Trigger: CACCAAGAGTACAGAGAACCACAGACTGCGTAGAAG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACATCAGAACCATTCTTaGGCTTGCTCAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETHQNHS*ACSSHP
Trigger: AGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKESLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCGGCTCACGGTCTTCCTaGAGAGGGACTCTCGTAATT +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLGSRSS*RGTLVI
Trigger: AATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTTCAAACTGTGGCACTaGCTGAGTACTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEFKLWH*LSTKQI
Trigger: GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAGAATCTTCAAACTGTaGCACTGGCTGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNRIFKL*HWLSTK
Trigger: CTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGAATCTTCAAACTGTaGCACTGGCTGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKERIFKL*HWLSTK
Trigger: CTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGGAGATTCAGGCAGAAGATGTTGGTAGGTTAAGTTGTCTTCCTCAATCCTCTACATGGAGCATGGAATaGTGTGAAAATGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: QEIQAEDVGRLSCLPQSSTWSME*CENATQ
Trigger: TTGGGTTGCATTTTCACACCATTCCATGCTCCATGT...AGAGGATTGAGGAAGACAACTTAACCTACCAACATCTTCTGCCTGAATCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
3UTR CAA 72 bp CAGGAGAGATCAAAAATGGTTTTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTCACTAGCTGTATAAGG +
Preference number: 4 (lower is better)
Translates to: QERSKMVFFRCW*SVYSSFTSCIR
Trigger: CCTTATACAGCTAGTGAAGGAGCTGTATACAGACAACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTGCCATGGTTAAACCCTaGATGGCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCAMVKP*MALSLF
Trigger: AAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGC...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCCTGCCTGGTGGCTGTTaGGAAGAGCACTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLLPGGC*EEHFSV
Trigger: AACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAG...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGTCTTCCGCAAATTCTaGTATGAAAGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETVFRKF*YESTSC
Trigger: GCAGGATGTGCTTTCATATCAGAATTTGCGGAAGAC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIAKSPS*IFFISE
Trigger: TTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATTCTCATCAGGACATaGCATCTGAGATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIILIRT*HLRFLL
Trigger: GAGGAGAAATCTCAGATGGCATGTCCTGATGAGAAT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTTGTTTAACTCAGCCTaGAGGTTGTTGATACTGTCT +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKELFNSA*RLLILS
Trigger: AGACAGTATCAACAACCTGCAGGCTGAGTTAAACAA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGACGTATCGCACTTGGTaGAAACTTGAAAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRATYRTW*KLEKVI
Trigger: AATGACCTTTTCAAGTTTGCACCAAGTGCGATACGT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTGCATGTTCAAATTCTaGTCCTTCTGCAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNCMFKF*SFCSLY
Trigger: ATACAAGCTGCAGAAGGAGCAGAATTTGAACATGCA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATCCTTTAATGAGCATTaGATTGAGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETSFNEH*IEGLVL
Trigger: CAGAACCAGGCCCTCAATGCAATGCTCATTAAAGGA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATCCACTCGGAGAGACTaGAATAGCTTGTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETSTRRD*NSLSFC
Trigger: ACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTTTTCCAGTTCTGCCTaGGCGGCTGTCACATCCTTT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIFSSSA*AAVTSF
Trigger: AAAGGATGTGACAGCCGCCCAGGCAGAACTGGAAAA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCTCCTTTTCTTCCCTTaGAGCAGCACAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILLFFP*SSTKSS
Trigger: CGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAGGAG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCTCCTCTTCAAGTGCCTaGATCCTCTCTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSSSSSA*ILSSKL
Trigger: CAGCTTTGAAGAGAGGATCCAGGCACTTGAAGAGGA...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGTTCATCATGTGGCTTaGAAAATGAGTTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNVHHVA*KMSWFG
Trigger: TCCAAACCAACTCATTTTCCAAGCCACATGATGAAC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATATCATTATCTTGCTTCTaGTCTCGTGAGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFISLSCF*SREKKD
Trigger: GTCCTTCTTCTCACGAGACCAGAAGCAAGATAATGA...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTTTCTTCCTTCACGCTaGCATACTCCCGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIFLPSR*HTPAEG
Trigger: ACCTTCAGCGGGAGTATGCCAGCGTGAAGGAAGAAA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAAAATTATCACTTTCCATaGGATATTTGTCACCATCGT +
Preference number: 4 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKNYHFP*DICHHR
Trigger: ACGATGGTGACAAATATCCCATGGAAAGTGATAATT...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGAAGCTACATGGAGCATaGAATGGTGTGAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRAKLHGA*NGVKMQ
Trigger: TTGCATTTTCACACCATTCCATGCTCCATGTAGCTT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAATTCCTGCAGAGATTTaGCCAGATGGGTATAGATGT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETIPAEI*PDGYRC
Trigger: ACATCTATACCCATCTGGTCAAATCTCTGCAGGAAT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCCAGGTAAGTAGCTACTaGAGTTGGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLQVSSY*SWAQNI
Trigger: GATGTTCTGAGCCCAACTTCAGTAGCTACTTACCTG...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCGGTATTAATGCTCTCTaGCTGATCAGTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLGINAL*LISPHH
Trigger: GTGATGGGGACTGATCAGTCAGAGAGCATTAATACC...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: KSIWKPISLETHAGEIKNEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCCCTGGCTTGGGACTaGACTAATGAATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISLAWD*TNESYL
Trigger: CAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTCCCTGGCTTGGGACTaGACTAATGAATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLSLAWD*TNESYL
Trigger: CAGATACGATTCATTAGTTCAGTCCCAAGCCAGGGA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTAGACACTGTTTCTTCTaGCACATTTGGGAGCACATT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCRHCFF*HIWEHI
Trigger: AATGTGCTCCCAAATGTGTCAGAAGAAACAGTGTCT...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATCATCTCTGAAAGCTTaGTTTCCAAACGCAACCGAA +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETSSLKA*FPNATE
Trigger: TTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCTGATGCTCCATTTGTaGAGCCTCAGTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILMLHL*SLSFSL
Trigger: GAGAGAGAAACTGAGGCTGCACAAATGGAGCATCAG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGATCTCACTGAAAAGTTaGATGTTCAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQTALSSSINRNHTWNKEISLKS*MFKFCS
Trigger: GGAGCAGAATTTGAACATGCAACTTTTCAGTGAGAT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTCATGTTCCGTGCTCTaGTGGGAGACACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLSCSVL*WETLFL
Trigger: AAGAAACAGTGTCTCCCACCAGAGCACGGAACATGA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATTCAAACTGTGGCACTaGCTGAGTACTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETFKLWH*LSTKQI
Trigger: GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGCCATGGTTAAACCCTaGATGGCTTTATCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIAMVKP*MALSLF
Trigger: AAAGAGGGATAAAGCCATTCAGGGTTTAACCATGGC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGAGGTGAGAGATCTCTaGACTTATTCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETEVRDL*TYSADY
Trigger: ATAATCTGCAGAATAAGTTCAGAGATCTCTCACCTC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTACTGTTCACCATAACTaGAGTCTTCTCTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCTVHHN*SLLCLI
Trigger: AATGAGACAGAGAAGACTTCAGTTATGGTGAACAGT...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCATCTCATTACTCTGCTaGAAATGCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIISLLC*KCWSLR
Trigger: CCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGAT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATCTCCAGAAACTTCCTaGTCTGTCAAGAATAGTTGT +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETSPETS*SVKNSC
Trigger: ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR GCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCCTTCAGGATTTTCTTTaGATGATGGCAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSLQDFL*MMASWQ
Trigger: TTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTCTTTTTCCTGGCGCTTaGTCAGCTGCAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISLFPGA*SAAKAS
Trigger: TGAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAG...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTATGACACAGATGCCATaGCCATCCTTAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISMTQMP*PSLICC
Trigger: GCAGCAGATTAAGGATGGCCATGGCATCTGTGTCAT...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAATTATCACTTTCCATaGGATATTTGTCACCATCGT +
Preference number: 4 (lower is better)
Translates to: SFGQTALSSSINRNHTWNNYHFP*DICHHR
Trigger: ACGATGGTGACAAATATCCCATGGAAAGTGATAATT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
3UTR CAA 72 bp GAAATCTTAGACTCCGTGTGCCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCA +
Preference number: 4 (lower is better)
Translates to: EILDSVCLKYPF*QPPLERSFIIS
Trigger: TGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATTTGAAGCTGAAATATaGAATTCTGGTAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETFEAEI*NSGSLP
Trigger: TGGAAGGCTACCAGAATTTCATATTTCAGCTTCAAA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR TCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTTGCTTCTGGTCTCGTaGGAAGAAGGACTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISLLLVS*EEGLFR
Trigger: TCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGCAA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCATGGTTTTCTTCAGGTaGTGGTTGTCTGTATACAGC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLMVFFR*WLSVYS
Trigger: GCTGTATACAGACAACCAGCACCTGAAGAAAACCAT...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR GCA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAATCTTAGACTCCGTGTaGCTTAAGTATCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: QTALSSSINRNHTWNKETILDSV*LKYPFL
Trigger: CAAAAATGGATACTTAAGGCACACGGAGTCTAAGAT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSRRDQK*FSSGAG
Trigger: ACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAAATTATCACTTTCCATaGGATATTTGTCACCATCGT +
Preference number: 4 (lower is better)
Translates to: SVCLKYPFLQPPLERSFINYHFP*DICHHR
Trigger: ACGATGGTGACAAATATCCCATGGAAAGTGATAATT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTTTGGTGTCACTGCCTaGGAGGAATCAAACAGATCA +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISFGVTA*EESNRS
Trigger: TGATCTGTTTGATTCCTCCCAGGCAGTGACACCAAA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCATGCTTGTAGAACCTTaGACAAATTCAGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: KYPFLQPPLERSFIISLLMLVEP*TNSDPC
Trigger: GCAAGGATCTGAATTTGTTCAAGGTTCTACAAGCAT...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR TCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCAGAACTATGAAGCTCTaGACCAGAAGCAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIRTMKL*TRSKNA
Trigger: AGCATTTTTGCTTCTGGTTCAGAGCTTCATAGTTCT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCATAATCTCATTACTCTaGTGCAAATGCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIIISLL*CKCWSL
Trigger: GAGTGACCAGCATTTGCAGCAGAGTAATGAGATTAT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTGGTTAAACCCTGAATaGCTTTATCCCTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIWLNPE*LYPSLD
Trigger: GTCTAAAGAGGGATAAAGCCATTCAGGGTTTAACCA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CCA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCAGGAGAGATCAAAAATaGTTTTCTTCAGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIRRDQK*FSSGAG
Trigger: ACCAGCACCTGAAGAAAACCATTTTTGATCTCTCCT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR GCA 90 bp GATTCTTCTAAACGCTTTCTCAAAGTTCGAATTTCCTGTATGTGTTCCATTAGTTTACTCTGCTGCAAATaGTGGTCACTCAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: DSSKRFLKVRISCMCSISLLCCK*WSLRKL
Trigger: TAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAA...ACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS CCA 90 bp CCGCCCCCTCCACCCCAGCTCTTGTTCAGACTCTGGCGGCGCCGCTaGAATTCAAACCACAGACGCCGCCATCTTTCCCGGCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPPPPQLLFRLWRRR*NSNHRRRHLSRRFF
Trigger: GAAGAAGCGCCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGGAGGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000491334.1
CDS GCA 90 bp GCCGCCTGTAGGCCTCTTCCAGGGTCAGCTTGGCCGTGCTCACACTaGTCACAAACTTGCTCAGTGGTGCTGGGTGTGGACCCTACACGG +
Preference number: 5 (lower is better)
Translates to: AACRPLPGSAWPCSH*SQTCSVVLGVDPTR
Trigger: CCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGAGGCCTACAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474262.5
CDS GCA 90 bp GGCCCCGCTAAGCCACCACCTGACAGTGATGCAGAGGCTACAGCATaGTATGCCGGTTCAGAGAACACCCTACAGCTGTGCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: GPAKPPPDSDAEATA*YAGSENTLQLCTAT
Trigger: GGTGGCCGTGCACAGCTGTAGGGTGTTCTCTGAACCGGCATAGCATGCTGTAGCCTCTGCATCACTGTCAGGTGGTGGCTTAGCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 90 bp TGCTATGCCGGTTCAGAGAACACCCTACAGCTGTGCACGGCCACCTaGCTGTCCAGGTATCCCTCAGGCTCACTTCTGTGGGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: CYAGSENTLQLCTAT*LSRYPSGSLLWARE
Trigger: CTCCCTGGCCCACAGAAGTGAGCCTGAGGGATACCTGGACAGCCAGGTGGCCGTGCACAGCTGTAGGGTGTTCTCTGAACCGGCATAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTACATGGCGGCCATTCTaGCTGGCCCACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PCQLFLEPALQSAAGFDATWRPF*LAHRWW
Trigger: CCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTGGGTGTGGACCCTTaGTTCCCAGCTCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALGVDP*FPALDL
Trigger: CAAGTCAAGAGCTGGGAACAAAGGGTCCACACCCAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS GCA 90 bp GAGGCTACAGCATGCTATGCCGGTTCAGAGAACACCCTACAGCTGTaGACGGCCACCTGGCTGTCCAGGTATCCCTCAGGCTCACTTCTG +
Preference number: 5 (lower is better)
Translates to: EATACYAGSENTLQL*TATWLSRYPSGSLL
Trigger: CAGAAGTGAGCCTGAGGGATACCTGGACAGCCAGGTGGCCGTGCACAGCTGTAGGGTGTTCTCTGAACCGGCATAGCATGCTGTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 90 bp ACCATTTCCCAACCCAGCATTGGGGTTGATGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCCACTGCAGCCGCTGAGCGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TISQPSIGVDAIQVI*YTGNKATAAAERPR
Trigger: CCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000481266.1
ENST00000491334.1
CDS CCA 90 bp CACATTTCCCAACCCAGCATTGGGGTTGATGCCATCCAGGTCATCTaGTACACTGGGAACAAGGCCACTGCAGCCGCTGAGCGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HISQPSIGVDAIQVI*YTGNKATAAAERPR
Trigger: CCTGGGACGCTCAGCGGCTGCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAGGGATGGACACGGCTaGGACAGCCAGAGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERDGHG*DSQSEG
Trigger: GCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CAA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCAGGGATGGACACGGCTaGGACAGCCAGAGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TLLSIISGASGPRIFTCFRDGHG*DSQSEG
Trigger: GCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCT...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSSSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS CCA 90 bp CAGCTTGGCCGTGCTCACACTGCTCACAAACTTGCTCAGTGGTGCTaGGTGTGGACCCTACACGGGGGATATGAAGGCTGTTACGTGCAG +
Preference number: 5 (lower is better)
Translates to: QLGRAHTAHKLAQWC*VWTLHGGYEGCYVQ
Trigger: CTGCACGTAACAGCCTTCATATCCCCCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474262.5
CDS CCA 90 bp AGAGTGAGACCACGGATGGTGCAGTCTCCTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTCTCCAGTCTCTCCCTCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RVRPRMVQSPLLFSR*ASSRSFSSLSLSCC
Trigger: GCAGCAGGAGAGGGAGAGACTGGAGAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGGTCTCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: RTATVAGEGVRVIPREWRAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEASSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQASSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCGTGTCCTCGTCCTCCTaGCTAGCCAGAAGCTACATG +
Preference number: 5 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAVSSSS*LARSYM
Trigger: CATGTAGCTTCTGGCTAGCAAGGAGGACGAGGACAC...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 90 bp TGGGAACAAGTGAGTGGGAACCCGGACCTCGGCTGGCCTGGGTGCTaGGCCTCAGTCCTTCTATGTTTCCTGCTGTTCCTTCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: WEQVSGNPDLGWPGC*ASVLLCFLLFLQKK
Trigger: CTTCTTCTGAAGGAACAGCAGGAAACATAGAAGGACTGAGGCTCAGCACCCAGGCCAGCCGAGGTCCGGGTTCCCACTCACTTGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 90 bp GCAAAGAGGACAGGCTGCCTGATTGCTTGGAGTCTAACCATTTACTaGTTTGCTCCACACCCTGGGTGGGCGGGTGGTAGAGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: AKRTGCLIAWSLTIY*FAPHPGWAGGRGVW
Trigger: CCAGACACCTCTACCACCCGCCCACCCAGGGTGTGGAGCAAACCAGTAAATGGTTAGACTCCAAGCAATCAGGCAGCCTGTCCTCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS-3UTR CAA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTCTTCTGATGCTCCATTaGTGCAGCCTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AAAADLLDQLLVVSLLLALLMLH*CSLSFS
Trigger: AGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAG...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGACCATCAGAACCATTCTaGGGCTTGCTCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: ASCRTATVAGEGVRVIPRPSEPF*GLLKPS
Trigger: GGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG...TCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCTGGATCAGCTGCTGGTaGTGTCTCTCCTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGWISCW*CLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCA...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGAGTGCTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCGGAGCTGGGAGCCTCTaGGGTTTGAATGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: GVLVAELPLSQERESVSFGAGSL*GLNVHF
Trigger: GAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCC...GAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAGCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTATCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVSSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 90 bp CAGCTGTCGGGTGGTCTTACAGCCCAAAGCACAGTAGCCTCAAGGTaGGAAGGGCCTCAGTACCTCTCAGTCTCCTGTGCTCTTCATCCA +
Preference number: 5 (lower is better)
Translates to: QLSGGLTAQSTVASR*EGPQYLSVSCALHP
Trigger: TGGATGAAGAGCACAGGAGACTGAGAGGTACTGAGGCCCTTCTCACCTTGAGGCTACTGTGCTTTGGGCTGTAAGACCACCCGACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS GCA 90 bp TTTAGTTTCCTAGGCCCTCTGGGAAGCAGCTGTGGGAAGGGACTGTaGCCCGATCAGGCAGACCCACATATGAGGGTCCAAGTTCTACGA +
Preference number: 5 (lower is better)
Translates to: FSFLGPLGSSCGKGL*PDQADPHMRVQVLR
Trigger: TCGTAGAACTTGGACCCTCATATGTGGGTCTGCCTGATCGGGGCACAGTCCCTTCCCACAGCTGCTTCCCAGAGGGCCTAGGAAACTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCT +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSMVQSP*LFSRWA
Trigger: AGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCAT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDSSSPI*IVSSSS
Trigger: GGAGGACGAGGACACGATCAAAATTGGGGAGGATGA...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDLVASC*NLSRSP
Trigger: GGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTCTTAGCCTCTCTGTaGGTAATACCAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RTATVAGEGVRVIPREWRFLASL*VIPGRE
Trigger: TTCCCTCCCTGGTATTACCAACAGAGAGGCTAAGAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCCCATCAGAACCATTCTaGGGCTTGCTCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSPSEPF*GLLKPS
Trigger: GGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSCSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PCQLFLEPALQSAAGFDACSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTTAATGAGCATTGCATaGAGGGCCTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RTATVAGEGVRVIPREWRLMSIA*RAWFCF
Trigger: GAAGCAGAACCAGGCCCTCAATGCAATGCTCATTAA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTACATGGCGGCCATTCTaGCTGGCCCACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSTWRPF*LAHRWW
Trigger: CCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACATGGCGGCCATTCTaGCTGGCCCACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPTWRPF*LAHRWW
Trigger: CCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTCCCAGCTCTTGACTaGTGGAGCTGGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAFPALD*WSWEPL
Trigger: AAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGGGAA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTTCCCAGCTCTTGACTaGTGGAGCTGGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LLSIISGASGPRIFTCFTFPALD*WSWEPL
Trigger: AAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGGGAA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCACACTGCTCACAAACTaGCTCAGTGGTGCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSTLLTN*LSGAGC
Trigger: ACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGT...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS TCA 90 bp CTGACACATTTGGGAGCAGACCATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LTHLGADHFPTQHWG*CHPGHLVHWEQGHC
Trigger: GCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000481266.1
CDS TCA 90 bp GACCAGAGCCATCGCCAAGTCCCCCTCGTGCATCTTCTTCATCTCTaGAAGCTTGCTTTCCAAACGCAACCGAAGAGCCTTCTCCGTCTC +
Preference number: 5 (lower is better)
Translates to: DQSHRQVPLVHLLHL*KLAFQTQPKSLLRL
Trigger: GAGACGGAGAAGGCTCTTCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGCGATGGCTCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000472883.1
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS TCA 90 bp CCATCACAAACCCCAGGGCCAAATAACGCATCAACAACACCTCTTTaGGGCCCCGCTAAGCCACCACCTGACAGTGATGCAGAGGCTACA +
Preference number: 5 (lower is better)
Translates to: PSQTPGPNNASTTPL*GPAKPPPDSDAEAT
Trigger: TGTAGCCTCTGCATCACTGTCAGGTGGTGGCTTAGCGGGGCCTCAAAGAGGTGTTGTTGATGCGTTATTTGGCCCTGGGGTTTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS GCA 90 bp AGTAGCCTCAAGGTGAGAAGGGCCTCAGTACCTCTCAGTCTCCTGTaGTCTTCATCCAGCTTCTCATACGCCTTCAGCTCCACTCGGAGA +
Preference number: 5 (lower is better)
Translates to: SSLKVRRASVPLSLL*SSSSFSYAFSSTRR
Trigger: TCTCCGAGTGGAGCTGAAGGCGTATGAGAAGCTGGATGAAGAGCACAGGAGACTGAGAGGTACTGAGGCCCTTCTCACCTTGAGGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS GCA 90 bp ATGATTAGGGCCATGGATATCCAGGAGAGCTGTGTGAAAGCCAAGTaGAGGGAGGATGAACCCCACCCCAAAGGGCTCGGACATGTAGAC +
Preference number: 5 (lower is better)
Translates to: MIRAMDIQESCVKAK*REDEPHPKGLGHVD
Trigger: GTCTACATGTCCGAGCCCTTTGGGGTGGGGTTCATCCTCCCTGCACTTGGCTTTCACACAGCTCTCCTGGATATCCATGGCCCTAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 90 bp TTTCTAAGATCACGGATGGTGCAGTCTCCTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTCTCCAGTCTCTCCCTCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLRSRMVQSPLLFSR*ASSRSFSSLSLSCC
Trigger: GCAGCAGGAGAGGGAGAGACTGGAGAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000480112.5
ENST00000483412.5
CDS CCA 90 bp TCAGTCTTGCCCTGCCCAACAGTGAGTCAATCTGTGTCGCAGATCTaGATCCGTCTCACCAGGGCAAAACCAAGGACTCTGGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SVLPCPTVSQSVSQI*IRLTRAKPRTLAPV
Trigger: AACTGGAGCCAGAGTCCTTGGTTTTGCCCTGGTGAGACGGATCCAGATCTGCGACACAGATTGACTCACTGTTGGGCAGGGCAAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482047.1
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTTCCCAACCCAGCATaGGGGTTGATGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHFPNPA*GLMPSR
Trigger: CCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACTGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDWFSVL*VRFCER
Trigger: GCGCTCACAAAACCTCACCAAGAGTACAGAGAACCA...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEASSSPI*IVSSSS
Trigger: GGAGGACGAGGACACGATCAAAATTGGGGAGGATGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEASFSPT*GTSPAF
Trigger: AAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LLSIISGASGPRIFTCFTSFSPT*GTSPAF
Trigger: AAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALVASC*NLSRSP
Trigger: GGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCTTCTTAGCCTCTCTGTaGGTAATACCAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAFLASL*VIPGRE
Trigger: TTCCCTCCCTGGTATTACCAACAGAGAGGCTAAGAA...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGTCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: RTATVAGEGVRVIPREWRSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CTAGTTGCCGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: LVAELPLSQERESVSFPEHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...CTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCGGCAACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTGGATCAGCTGCTGGTaGTGTCTCTCCTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHWISCW*CLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSGSLLG*NVHFSK
Trigger: CTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCC...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGGAGCTGGGAGCCTCTaGGGTTTGAATGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAGAGSL*GLNVHF
Trigger: GAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTACTGGGTGTGGACCCTTaGTTCCCAGCTCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVLGVDP*FPALDL
Trigger: CAAGTCAAGAGCTGGGAACAAAGGGTCCACACCCAG...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PCQLFLEPALQSAAGFDATFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 90 bp CTTCTGACACATTTGGGAGCACATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LLTHLGAHFPTQHWG*CHPGHLVHWEQGHC
Trigger: GCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGTGCTCCCAAATGTGTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 90 bp CAGCCTTCTCCCGACGCCTCTGAGGACATGTGCAAAGAGAAGCCCTaGCATCTTCCACAACCAAAGGGTCAGCCATCGAAGGAACTCAAT +
Preference number: 5 (lower is better)
Translates to: QPSPDASEDMCKEKP*HLPQPKGQPSKELN
Trigger: ATTGAGTTCCTTCGATGGCTGACCCTTTGGTTGTGGAAGATGTCAGGGCTTCTCTTTGCACATGTCCTCAGAGGCGTCGGGAGAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS GCA 90 bp TCGGCAGAAGACCCCAGATTCACAAGGATGACTCAAGCTGGTGCCTaGATTCCAGTAGCCCACAGTCTGATCAGAACACAGACACTGCAG +
Preference number: 5 (lower is better)
Translates to: SAEDPRFTRMTQAGA*IPVAHSLIRTQTLQ
Trigger: CTGCAGTGTCTGTGTTCTGATCAGACTGTGGGCTACTGGAATGCAGGCACCAGCTTGAGTCATCCTTGTGAATCTGGGGTCTTCTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433194.6
ENST00000480467.5
ENST00000484546.1
CDS GCA 90 bp ACCTCGGCTGGCCTGGGTGCTGAGCCTCAGTCCTTCTATGTTTCCTaGTGTTCCTTCAGAAGAAGAGTGGGTCAAAGAGCTAGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: TSAGLGAEPQSFYVS*CSFRRRVGQRASFN
Trigger: GTTGAAGCTAGCTCTTTGACCCACTCTTCTTCTGAAGGAACAGCAGGAAACATAGAAGGACTGAGGCTCAGCACCCAGGCCAGCCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTNPALG*MPSRSS
Trigger: AGATGACCTGGATGGCATCAACCCCAATGCTGGGTT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACCTTCTGATGCTCCATTaGTGCAGCCTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDLLMLH*CSLSFS
Trigger: AGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAG...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCT +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFMVQSP*LFSRWA
Trigger: AGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCAT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQESACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEARRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CCTTGCCAGCTGTTCCTTGAGCCTGCTCTGCAGAGTGCTGCTGGTTTCGATGCTTTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PCQLFLEPALQSAAGFDAFFRCW*SVYSSF
Trigger: GAAGGAGCTGTATACAGACAACCAGCACCTGAAGAA...AGCATCGAAACCAGCAGCACTCTGCAGAGCAGGCTCAAGGAACAGCTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGTGTCCTCGTCCTCCTaGCTAGCCAGAAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLVSSSS*LARSSV
Trigger: AACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACAC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GCCGCTGCAGCGGACCTCCTGGATCAGCTGCTGGTTGTGTCTCTCCTTCTCGCTTTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 5 (lower is better)
Translates to: AAAADLLDQLLVVSLLLAFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...AGCGAGAAGGAGAGACACAACCAGCAGCTGATCCAGGAGGTCCGCTGCAGCGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQENVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQANVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSFSPT*GTSPAF
Trigger: AAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCTCTTTCAGTCCTACCTaGGGCACTTCGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPSFSPT*GTSPAF
Trigger: AAAGGCAGGCGAAGTGCCCAAGGTAGGACTGAAAGA...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCACTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPLVASC*NLSRSP
Trigger: GGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAG...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TGCTGCTGGTTTCGATGCTCCTTTCTAGTTGCAAGCGCAGAGCCTGGATCTCCAGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: CCWFRCSFLVASAEPGSPALSAV*IGFSSQ
Trigger: TTGGGAAGAGAAACCGATCAACACTGCACTCAGCGC...TGGAGATCCAGGCTCTGCGCTTGCAACTAGAAAGGAGCATCGAAACCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACATGGCGGCCGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: DLFEQGLIVLNQAQDMAAALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...GGCCGCCATGTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATTGGATCAGCTGCTGGTaGTGTCTCTCCTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNWISCW*CLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCA...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGRDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTCTCTGAAACTGATTTaGGTGTCACTGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQASLKLI*VSLPGR
Trigger: CCTCCCAGGCAGTGACACCAAAATCAGTTTCAGAGA...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACCCTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: TLLSIISGASGPRIFTCFGSLLG*NVHFSK
Trigger: CTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCC...GAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCGGAGCTGGGAGCCTCTaGGGTTTGAATGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPGAGSL*GLNVHF
Trigger: GAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCC...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCACACTGCTCACAAACTaGCTCAGTGGTGCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPTLLTN*LSGAGC
Trigger: ACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGTCTTCCAGGGTCAGCTaGGCCGTGCTCACACTGCTC +
Preference number: 5 (lower is better)
Translates to: SSCFRRAKILFNSACRLLSSRVS*AVLTLL
Trigger: GAGCAGTGTGAGCACGGCCAAGCTGACCCTGGAAGA...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTTTTTACCACCCGTTaGTGGAGCACCTGCACCTTT +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALFTTR*WSTCTF
Trigger: AAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS TCA 90 bp CTGGTTTTGTGTACTTACGACCATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LVLCTYDHFPTQHWG*CHPGHLVHWEQGHC
Trigger: GCAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCGTAAGTACACAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491334.1
CDS GCA 90 bp CTGTCTTTCTCATCCAGGACCAGAGCCATCGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAAAGCTTGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: LSFSSRTRAIAKSPS*IFFISESLLSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGCGATGGCTCTGGTCCTGGATGAGAAAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000472883.1
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS GCA 90 bp AGGCATCATTCAGAAGTTCACATGTCACACACAGATGCTCAGAGCTaGATTCTCAGCAAGTGGGGAGAGGCAGGGGCAGTACCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RHHSEVHMSHTDAQS*ILSKWGEAGAVPCL
Trigger: CAAACACGGTACTGCCCCTGCCTCTCCCCACTTGCTGAGAATGCAGCTCTGAGCATCTGTGTGTGACATGTGAACTTCTGAATGATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 90 bp CAGTCAGGTCCCCTGGCTCCTAGGGTACAGCATGTCAGCTATCAATaGAAAGACACCTCTGTGGGGCAAAGGCATCATTCAGAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: QSGPLAPRVQHVSYQ*KDTSVGQRHHSEVH
Trigger: GTGAACTTCTGAATGATGCCTTTGCCCCACAGAGGTGTCTTTCCATTGATAGCTGACATGCTGTACCCTAGGAGCCAGGGGACCTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 90 bp GTCAGGATGATAATCCCAGGATACCCAACGCTCCAGAGAGTCCAGTaGGGTTTAGGAACAGCCCTGGACTCGAAGCTGGAAATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: VRMIIPGYPTLQRVQ*GLGTALDSKLEMVS
Trigger: AGAAACCATTTCCAGCTTCGAGTCCAGGGCTGTTCCTAAACCCCACTGGACTCTCTGGAGCGTTGGGTATCCTGGGATTATCATCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS-3UTR CAA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNNPALG*MPSRSS
Trigger: AGATGACCTGGATGGCATCAACCCCAATGCTGGGTT...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGACTGCTTTGGAGGCTTaGATGAGCAGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALTALEA*MSSCSL
Trigger: GAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACAAGCTCTCAACTGCTTaGGAGGCTTTGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDKLSTA*EALMSS
Trigger: GCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTCTTCTGATGCTCCATTaGTGCAGCCTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQALLMLH*CSLSFS
Trigger: AGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAG...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTWFSVL*VRFCER
Trigger: GCGCTCACAAAACCTCACCAAGAGTACAGAGAACCA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTAACTCAGCCTGCAGGTaGTTGATACTGTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQANSACR*LILSDS
Trigger: GGAATCAGACAGTATCAACAACCTGCAGGCTGAGTT...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTTGTTGCTTCATGCTaGAATCTCAGCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLVASC*NLSRSP
Trigger: GGGCGACCTGCTGAGATTCAAGCATGAAGCAACAAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNALSAV*IGFSSQ
Trigger: TTGGGAAGAGAAACCGATCAACACTGCACTCAGCGC...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCAFSNV*SGVGLP
Trigger: GGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGC...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCCTTCTGTCCCACACTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SEPFLGLLKPSWAPSVPHSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...GTGTGGGACAGAAGGGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTCCGTGTTAATGAGCATTGCATaGAGGGCCTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SRQPGAWAPSQSEILDSVLMSIA*RAWFCF
Trigger: GAAGCAGAACCAGGCCCTCAATGCAATGCTCATTAA...CACGGAGTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTTGGATCAGCTGCTGGTaGTGTCTCTCCTTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSWISCW*CLSFSL
Trigger: CAGCGAGAAGGAGAGACACAACCAGCAGCTGATCCA...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQERDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAGGGATGGACACGGCTaGGACAGCCAGAGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNRDGHG*DSQSEG
Trigger: GCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATCTCTGAAACTGATTTaGGTGTCACTGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTSLKLI*VSLPGR
Trigger: CCTCCCAGGCAGTGACACCAAAATCAGTTTCAGAGA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTATCTCTGAAACTGATTTaGGTGTCACTGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVSLKLI*VSLPGR
Trigger: CCTCCCAGGCAGTGACACCAAAATCAGTTTCAGAGA...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATGGCGGCCATTCTaGCTGGCCCACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKETWRPF*LAHRWW
Trigger: CCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGACATGGCGGCCATTCTaGCTGGCCCACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMTWRPF*LAHRWW
Trigger: CCACCACCTGTGGGCCAGCAAGAATGGCCGCCATGT...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGGGAGCTGGGAGCCTCTaGGGTTTGAATGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLGAGSL*GLNVHF
Trigger: GAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCC...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTCCCAGCTCTTGACTaGTGGAGCTGGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPFPALD*WSWEPL
Trigger: AAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGGGAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCACTGGGTGTGGACCCTTaGTTCCCAGCTCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPLGVDP*FPALDL
Trigger: CAAGTCAAGAGCTGGGAACAAAGGGTCCACACCCAG...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHTFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFTFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCCTGGCTGATCTGTTTGAGCAGGGCCTCATAGTCCTCAATCAGGCCCAGGACTTTCTTCTGACACATTaGGGAGCACATTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: SLADLFEQGLIVLNQAQDFLLTH*GAHFPT
Trigger: GGTTGGGAAATGTGCTCCCAAATGTGTCAGAAGAAA...GTCCTGGGCCTGATTGAGGACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCGTGTCCTCGTCCTCCTaGCTAGCCAGAAGCTACATG +
Preference number: 5 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAVSSSS*LARSYM
Trigger: CATGTAGCTTCTGGCTAGCAAGGAGGACGAGGACAC...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS CCA 90 bp TCTTCCACCTGCTGCACCTTCTTTCGAGCATCTTCTTTCACCCGCTaGATTTCAGAGCCACCTGCTTCAGCTAAGCTCTCAACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SSTCCTFFRASSFTR*ISEPPASAKLSTAL
Trigger: CAAAGCAGTTGAGAGCTTAGCTGAAGCAGGTGGCTCTGAAATCCAGCGGGTGAAAGAAGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVNPALG*MPSRSS
Trigger: AGATGACCTGGATGGCATCAACCCCAATGCTGGGTT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGTTTCTTCTGACACATTaGGGAGCAGACCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEFLLTH*GADHFP
Trigger: TGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAA...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTACTGCTTTGGAGGCTTaGATGAGCAGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSTALEA*MSSCSL
Trigger: GAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCAAGCTCTCAACTGCTTaGGAGGCTTTGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESKLSTA*EALMSS
Trigger: GCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTCTGATGCTCCATTaGTGCAGCCTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHLLMLH*CSLSFS
Trigger: AGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLWFSVL*VRFCER
Trigger: GCGCTCACAAAACCTCACCAAGAGTACAGAGAACCA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCT +
Preference number: 5 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLAMVQSP*LFSRWA
Trigger: AGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCAT...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTFFRCW*SVYSSF
Trigger: GAAGGAGCTGTATACAGACAACCAGCACCTGAAGAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAGCCAGAAGCTCTGTTaGTTCTGTAGACGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHSQKLC*FCRRKS
Trigger: AGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGTGTCCTCGTCCTCCTaGCTAGCCAGAAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREVSSSS*LARSSV
Trigger: AACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACAC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALNVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSALSAV*IGFSSQ
Trigger: TTGGGAAGAGAAACCGATCAACACTGCACTCAGCGC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTCTTAGCCTCTCTGTaGGTAATACCAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTFLASL*VIPGRE
Trigger: TTCCCTCCCTGGTATTACCAACAGAGAGGCTAAGAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCCATCAGAACCATTCTaGGGCTTGCTCAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSPSEPF*GLLKPS
Trigger: GGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGG...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGAACTGCCACTGTCGCAGGAGAGGGAGTCCGTGTCATTCCCAGAGAGTGGAGGAATGCTTGTAGAACCTaGAACAAATTCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: RTATVAGEGVRVIPREWRNACRT*NKFRSL
Trigger: CAAGGATCTGAATTTGTTCAAGGTTCTACAAGCATT...CCTCCACTCTCTGGGAATGACACGGACTCCCTCTCCTGCGACAGTGGCAGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTTAATGAGCATTGCATaGAGGGCCTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFLMSIA*RAWFCF
Trigger: GAAGCAGAACCAGGCCCTCAATGCAATGCTCATTAA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHRDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCCTTTCCATGGGATATTaGTCACCATCGTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GTTLGTKRQRELGGGSTSLSMGY*SPSCLS
Trigger: TGACAAACACGATGGTGACAAATATCCCATGGAAAG...GCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCCTGGGCCCCTTCTGTCCCACACAAAACTGTAATTATGGCCTCACTGCACTGTCTCTGAAACTGATTTaGGTGTCACTGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ILGPFCPTQNCNYGLTALSLKLI*VSLPGR
Trigger: CCTCCCAGGCAGTGACACCAAAATCAGTTTCAGAGA...CAGTGCAGTGAGGCCATAATTACAGTTTTGTGTGGGACAGAAGGGGCCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTAATGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PRSSSRTTFRRSGLDSSNGSLLG*NVHFSK
Trigger: CTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCC...ATTACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACACTGCTCACAAACTaGCTCAGTGGTGCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPTLLTN*LSGAGC
Trigger: ACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGT...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTTTCCATGGGATATTaGTCACCATCTCTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQELSMGY*SPSLSL
Trigger: GAGACTGAGAGATGGTGACAAATATCCCATGGAAAG...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360190.8
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACTTAGCCTCCTCTGTTaGTTCTGTAGACGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTLSLLC*FCRRKS
Trigger: AGACTTGCGTCTACAGAACAAACAGAGGAGGCTAAG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360822.7
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAAGCTCTCAACTGCTTaGGAGGCTTTGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVKLSTA*EALMSS
Trigger: GCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTTCATCTCTGAAAGCTaGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHFISES*LSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGCTTCTGATGCTCCATTaGTGCAGCCTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLLLMLH*CSLSFS
Trigger: AGAGAAACTGAGGCTGCACAAATGGAGCATCAGAAG...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAAGAATAGTTGTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRIVVPEAVPVPLSEGLASACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...GGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGACAACTATTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTGATTCAGCTGTTCCTGGAAACCCTCGGCCACACAGTAATCCACATCACTGGCAACTCAGCCTGCAGGTaGTTGATACTGTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: LIQLFLETLGHTVIHITGNSACR*LILSDS
Trigger: GGAATCAGACAGTATCAACAACCTGCAGGCTGAGTT...GCCAGTGATGTGGATTACTGTGTGGCCGAGGGTTTCCAGGAACAGCTGAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGTTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLFFRCW*SVYSSF
Trigger: GAAGGAGCTGTATACAGACAACCAGCACCTGAAGAA...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEALKYPF*QPPLER
Trigger: CCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLSIISGASGPRIFTCFTLKYPF*QPPLER
Trigger: CCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: IQELEAFLPPVCGAPAPFSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...GAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQRECSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 5 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGCTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRALNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TACGCCTTCAGCTCCACTCGGAGAGACTGCAATAGCTTGTCATTCTGTGAGAGCCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: YAFSSTRRDCNSLSFCESHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...GCTCTCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTNKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCATTTCTTCCCCATCAGAACCATTCTTGGGCTTGCTCAAGCCATCCTGGGCCCAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SFLPHQNHSWACSSHPGPNKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...GGGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTCTGATGGGGAAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDNKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTTGTCACCATCGTGTTTGTCAGGCTGAAGGGGCACCTCAGGGATGGACACGGCAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: FVTIVFVRLKGHLRDGHGRDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...GCCGTGTCCATCCCTGAGGTGCCCCTTCAGCCTGACAAACACGATGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCAGGGATGGACACGGCTaGGACAGCCAGAGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: NLITLLQMLVTQEINLVIRDGHG*DSQSEG
Trigger: GCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCT...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTCCCAGCTCTTGACTaGTGGAGCTGGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCFPALD*WSWEPL
Trigger: AAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGGGAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTTCCCAGCTCTTGACTaGTGGAGCTGGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSFPALD*WSWEPL
Trigger: AAGAGGCTCCCAGCTCCACAAGTCAAGAGCTGGGAA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAACACTGCTCACAAACTaGCTCAGTGGTGCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQRETLLTN*LSGAGC
Trigger: ACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS CCA 90 bp AGCCTCAGTCCTTCTATGTTTCCTGCTGTTCCTTCAGAAGAAGAGTaGGTCAAAGAGCTAGCTTCAACACCCATCCACTCTACCCACAAG +
Preference number: 5 (lower is better)
Translates to: SLSPSMFPAVPSEEE*VKELASTPIHSTHK
Trigger: CTTGTGGGTAGAGTGGATGGGTGTTGAAGCTAGCTCTTTGACCCACTCTTCTTCTGAAGGAACAGCAGGAAACATAGAAGGACTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTACTGCTTTGGAGGCTTaGATGAGCAGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCTALEA*MSSCSL
Trigger: GAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTACTGCTTTGGAGGCTTaGATGAGCAGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSTALEA*MSSCSL
Trigger: GAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGT...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAAAGCTCTCAACTGCTTaGGAGGCTTTGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREKLSTA*EALMSS
Trigger: GCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: TTSKSSRPFYHPFVEHLHLKYPF*QPPLER
Trigger: CCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG...GTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTACAAGTTCACCTTTTaGCTTAGGTGTCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAYKFTF*LRCLLS
Trigger: ACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTA...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CTGCTGTCAATCATCTCTGGGGCCAGCGGACCGAGGATTTTCACGTGTTTCACGTACAAGTTCACCTTTTaGCTTAGGTGTCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LLSIISGASGPRIFTCFTYKFTF*LRCLLS
Trigger: ACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTA...CGTGAAACACGTGAAAATCCTCGGTCCGCTGGCCCCAGAGATGATTGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TGGGTGGCAGGGAGACGATACATATTTCCTAATGACCGGGATGGTTTTATTAGGTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WVAGRRYIFPNDRDGFIRCSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...CCTAATAAAACCATCCCGGTCATTAGGAAATATGTATCGTCTCCCTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQADLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTTTATTGAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: HLEQRDSVSSVGEAQALLNKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...CAATAAAGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVRDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCTGGGTGTGGACCCTTaGTTCCCAGCTCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKELGVDP*FPALDL
Trigger: CAAGTCAAGAGCTGGGAACAAAGGGTCCACACCCAG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GAACCACACTTGGAACAAAGAGACAGCGTGAGCTCGGTGGGGGAAGCACAAGCTGTGGGTTACGACCAATaGATCAAAGATGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: EPHLEQRDSVSSVGEAQAVGYDQ*IKDDFF
Trigger: GAAAAAGTCATCTTTGATCAATTGGTCGTAACCCAC...AGCTTGTGCTTCCCCCACCGAGCTCACGCTGTCTCTTTGTTCCAAGTGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCGTGGGTTACGACCAATaGATCAAAGATGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEAVGYDQ*IKDDFF
Trigger: GAAAAAGTCATCTTTGATCAATTGGTCGTAACCCAC...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATTTTCTTCTGACACATTaGGGAGCACATTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHFLLTH*GAHFPT
Trigger: GGTTGGGAAATGTGCTCCCAAATGTGTCAGAAGAAA...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 90 bp CTTTTCTTCCCTTGGAGCAGCACAAAGTCCTCGGAGCTCTCCAGATaGCACATTCTCATCAGGACATGCCATCTGAGATTTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LFFPWSSTKSSELSR*HILIRTCHLRFLLF
Trigger: AAAGAGGAGAAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGGGAAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
ENST00000482047.1
ENST00000483412.5
CDS CCA 90 bp TTGGGCTCAGAACATCTTCAGGATTTTCTTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGCAAATCTCAGAGTCATTCAGCAACG +
Preference number: 5 (lower is better)
Translates to: LGSEHLQDFLCMMAS*QGHQVGKSQSHSAT
Trigger: CGTTGCTGAATGACTCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTCTGAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425647.1
CDS CCA 90 bp CTCCTAGGGTACAGCATGTCAGCTATCAATGGAAAGACACCTCTGTaGGGCAAAGGCATCATTCAGAAGTTCACATGTCACACACAGATG +
Preference number: 5 (lower is better)
Translates to: LLGYSMSAINGKTPL*GKGIIQKFTCHTQM
Trigger: CATCTGTGTGTGACATGTGAACTTCTGAATGATGCCTTTGCCCCACAGAGGTGTCTTTCCATTGATAGCTGACATGCTGTACCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATTTCTTCTGACACATTaGGGAGCAGACCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPFLLTH*GADHFP
Trigger: TGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACACTGCTTTGGAGGCTTaGATGAGCAGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNTALEA*MSSCSL
Trigger: GAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGCTGCCTGGTGGCTGTaGAGAAGAGCACTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNAAWWL*RRALFC
Trigger: ACAGAAAAGTGCTCTTCTCAACAGCCACCAGGCAGC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTCGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSRRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAATTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKFFRCW*SVYSSF
Trigger: GAAGGAGCTGTATACAGACAACCAGCACCTGAAGAA...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAAGCCAGAAGCTCTGTTaGTTCTGTAGACGCAAGTCT +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQRESQKLC*FCRRKS
Trigger: AGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSSSPI*IVSSSS
Trigger: GGAGGACGAGGACACGATCAAAATTGGGGAGGATGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACATTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACTACAAGTTCACCTTTTaGCTTAGGTGTCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDYKFTF*LRCLLS
Trigger: ACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTA...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTGCTCCTTCTGCAGCTaGTATTCCTGTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKECSFCS*YSCSSS
Trigger: GCTGGAGGAACAGGAATACAAGCTGCAGAAGGAGCA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCAATGCTTGTAGAACCTaGAACAAATTCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: STPVPAPDLKYNIQELEANACRT*NKFRSL
Trigger: CAAGGATCTGAATTTGTTCAAGGTTCTACAAGCATT...GGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTRDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGGAGCTGGGAGCCTCTaGGGTTTGAATGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNGAGSL*GLNVHF
Trigger: GAAATGGACATTCAAACCCAAGAGGCTCCCAGCTCC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGACACTGCTCACAAACTaGCTCAGTGGTGCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRATLLTN*LSGAGC
Trigger: ACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CGCACAGCCTCAACTCCGGTGCCTGCCCCTGATCTGAAATACAACATCCAAGAGAAAAATAGATTTCCTTaGGCCAGACAGCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RTASTPVPAPDLKYNIQEKNRFP*ARQLFL
Trigger: AAGAAAGAGCTGTCTGGCCAAAGGAAATCTATTTTT...CTCTTGGATGTTGTATTTCAGATCAGGGGCAGGCACCGGAGTTGAGGCTGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS GCA 90 bp CAGTTCAGGGAAGCCTCTGGGCCCCAGAGATATGAAAGCTCAAGATaGTCACAGTCCAATGTCTACTTTCCTTGTTCTTTACTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: QFREASGPQRYESSR*SQSNVYFPCSLLKR
Trigger: TCTCTTGAGTAAAGAACAAGGAAAGTAGACATTGGACTGTGAGCATCTTGAGCTTTCATATCTCTGGGGCCCAGAGGCTTCCCTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491334.1
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAATTTCTTCTGACACATTaGGGAGCAGACCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREFLLTH*GADHFP
Trigger: TGGGAAATGGTCTGCTCCCAAATGTGTCAGAAGAAA...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAGCTCTCAACTGCTTaGGAGGCTTTGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNKLSTA*EALMSS
Trigger: GCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKESACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGCGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMRRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTCTTCAGGTGCTGGTaGTCTGTATACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCFFRCW*SVYSSF
Trigger: GAAGGAGCTGTATACAGACAACCAGCACCTGAAGAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCAGTTGCTTCCGCAGGGCAAAAATCTTGTTTAACTCAGCCTGCAGGTTGTTGTCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: SSCFRRAKILFNSACRLLSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...CAACAACCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCGGAAGCAACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: GFSSQASLVASCLNLSRSNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCGAACCATTCTTGGGCTaGCTCAAGCCATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSEPFLG*LKPSWA
Trigger: GGCCCAGGATGGCTTGAGCAAGCCCAAGAATGGTTC...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TGGGCACTTCGCCTGCCTTTACTAGCTGGGCCTCACAAGACAACTTCAGTTCATGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 5 (lower is better)
Translates to: WALRLPLLAGPHKTTSVHDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...ATGAACTGAAGTTGTCTTGTGAGGCCCAGCTAGTAAAGGCAGGCGAAGTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCAGCAGCTCAGCACATaGATTCAGCTGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKEQQLST*IQLFLE
Trigger: TTCCAGGAACAGCTGAATCAATGTGCTGAGCTGCTG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTCGAGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACACCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: ARGLFTTRLWSTCTFLTTPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...TGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCTCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTCCCAGAAGCAGTTCCCGTACCACTTTCAGAAGGTCTGGCCTGGATTCCAGTACCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VPEAVPVPLSEGLAWIPVPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...TACTGGAATCCAGGCCAGACCTTCTGAAAGTGGTACGGGAACTGCTTCTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTTCTTCTAGGCAGCCAGGTGCGTGGGCCCCATCACAATCTGAAATCTTAGACCCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: PSSRQPGAWAPSQSEILDPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...GTCTAAGATTTCAGATTGTGATGGGGCCCACGCACCTGGCTGCCTAGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACGGGAGCCTCTTGGGTTaGAATGTCCATTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNGSLLG*NVHFSK
Trigger: CTTGCTGAAATGGACATTCAAACCCAAGAGGCTCCC...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRATFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCTTTTTACCACCCGTTaGTGGAGCACCTGCACCTTT +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKELFTTR*WSTCTF
Trigger: AAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS CCA 90 bp CTTGCTAGCCAGAAGCTCTGTTTGTTCTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAAT +
Preference number: 5 (lower is better)
Translates to: LASQKLCLFCRRKSI*KPISLETHAGEIKN
Trigger: ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGCTTCTGGCTAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS CCA 90 bp GGACTTCTTAGCCTCCTCTGTTTGTTCTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAAT +
Preference number: 5 (lower is better)
Translates to: GLLSLLCLFCRRKSI*KPISLETHAGEIKN
Trigger: ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGGAGGCTAAGAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360822.7
CDS-3UTR CAA 90 bp GTTTTACCATCAAGGTGTTCTCCAGAAACTTCCTGCTCTGTCAAGAATAGTTGTAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: VLPSRCSPETSCSVKNSCNPALG*MPSRSS
Trigger: AGATGACCTGGATGGCATCAACCCCAATGCTGGGTT...ACAACTATTCTTGACAGAGCAGGAAGTTTCTGGAGAACACCTTGATGGTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTCATCTCTGAAAGCTaGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCFISES*LSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATATGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: SVCLKYPFLQPPLERSFIWFSVL*VRFCER
Trigger: GCGCTCACAAAACCTCACCAAGAGTACAGAGAACCA...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AATCTCATTACTCTGCTGCAAATGCTGGTCACTCAGGAAATTAATCTCGTCATCTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: NLITLLQMLVTQEINLVISSSPI*IVSSSS
Trigger: GGAGGACGAGGACACGATCAAAATTGGGGAGGATGA...GATGACGAGATTAATTTCCTGAGTGACCAGCATTTGCAGCAGAGTAATGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGTTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 5 (lower is better)
Translates to: GFSSQASLVASCLNLSRSFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CTTCAGGATTTTCTTTGCATGATGGCAAGCTGGCAAGGTCATCAGGTGGGCAAACTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LQDFLCMMASWQGHQVGKLKYPF*QPPLER
Trigger: CCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAG...TTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAAATGTGGCCTTCTCATaGAACAAAGGGGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVCLKYPFLQPPLERSFINVAFS*NKGASR
Trigger: CCTGCTTGCCCCTTTGTTCAATGAGAAGGCCACATT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCATACAAGTTCACCTTTTaGCTTAGGTGTCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FTTRLWSTCTFLTTTLKPYKFTF*LRCLLS
Trigger: ACTGAGAAGACACCTAAGCAAAAAGGTGAACTTGTA...TGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGCCTTCTCATTGAACAAAGGGGCAAGCAGGTTTATGAATGCACCTTCTTCTGCACTTGGTGCAAACTaGAAAAGGTCATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VAFSLNKGASRFMNAPSSALGAN*KRSFLP
Trigger: GGGAAGAAATGACCTTTTCAAGTTTGCACCAAGTGC...AGAAGAAGGTGCATTCATAAACCTGCTTGCCCCTTTGTTCAATGAGAAGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCCTTAATCTGCTGCCGTaGAAGGGAGAGCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: KYPFLQPPLERSFIISLLLNLLP*KGELPG
Trigger: GCCAGGGAGCTCTCCCTTCAACGGCAGCAGATTAAG...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACCATGGTGTTCATGTGTaGACGGGAGATGACACAGAT +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNHGVHV*TGDDTD
Trigger: ATCTGTGTCATCTCCCGTCAACACATGAACACCATG...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTTAATGAGCATTGCATaGAGGGCCTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNLMSIA*RAWFCF
Trigger: GAAGCAGAACCAGGCCCTCAATGCAATGCTCATTAA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGTTAATGAGCATTGCATaGAGGGCCTGGTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKELMSIA*RAWFCF
Trigger: GAAGCAGAACCAGGCCCTCAATGCAATGCTCATTAA...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGAGAGACTGCAATAGCTaGTCATTCTGTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRARDCNS*SFCESS
Trigger: GCTGCTCTCACAGAATGACAAGCTATTGCAGTCTCT...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AGGCCTTTTTACCACCCGTTTGTGGAGCACCTGCACCTTTCTGACAACAACTCTGTGGGTTACGACCAATaGATCAAAGATGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: RPFYHPFVEHLHLSDNNSVGYDQ*IKDDFF
Trigger: GAAAAAGTCATCTTTGATCAATTGGTCGTAACCCAC...AGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCT +
Preference number: 5 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSMVQSP*LFSRWA
Trigger: AGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCAT...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp TCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAAACTCAGCCTGCAGGTaGTTGATACTGTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: SVCLKYPFLQPPLERSFINSACR*LILSDS
Trigger: GGAATCAGACAGTATCAACAACCTGCAGGCTGAGTT...TATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACACGCAGGGCAAAAATCTaGTTTAACTCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETRRAKI*FNSACR
Trigger: CCTGCAGGCTGAGTTAAACAAGATTTTTGCCCTGCG...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCACTGTCCATTTCCTaGTCTCTCCAGACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSLSIS*SLQTED
Trigger: ATCTTCTGTCTGGAGAGACAAGGAAATGGACAGTGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACTCTTCAGGATTTTCTTaGCATGATGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNSSGFS*HDGKLA
Trigger: TGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGA...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp TCCTTTGGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAACAAATTCAGATCCTaGCCGTTCCAACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SFGQTALSSSINRNHTWNNKFRS*PFQLFP
Trigger: CGGAAACAGTTGGAACGGCAAGGATCTGAATTTGTT...GTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGTTTCTCTTCCCAAGCCTCTCTTGTTGCTTCATGCTTGAATCTCAGCAGGTCGAATGCTTGTAGAACCTaGAACAAATTCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: GFSSQASLVASCLNLSRSNACRT*NKFRSL
Trigger: CAAGGATCTGAATTTGTTCAAGGTTCTACAAGCATT...CGACCTGCTGAGATTCAAGCATGAAGCAACAAGAGAGGCTTGGGAAGAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GACTCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCCTTTCCATGGGATATTaGTCACCATCGTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: DSVCLKYPFLQPPLERSFLSMGY*SPSCLS
Trigger: TGACAAACACGATGGTGACAAATATCCCATGGAAAG...GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAACTTTTTCCTGGCGCTaGCTCAGCTGCAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETTFSWR*LSCKSF
Trigger: GAAGCTTTTGCAGCTGAGCAAGCGCCAGGAAAAAGT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GCCCCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTAAAAATAGATTTCCTTaGGCCAGACAGCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: APDLKYNIQELEAFLPPVKNRFP*ARQLFL
Trigger: AAGAAAGAGCTGTCTGGCCAAAGGAAATCTATTTTT...AACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS TCA 90 bp GATCACTATAAAGTGAAAATGATTCTTCCCGCCTCCGAATTTCGCTaGTCTGCTCCTCCAAGGTCTTCCGCAAATTCTGATATGAAAGCA +
Preference number: 5 (lower is better)
Translates to: DHYKVKMILPASEFR*SAPPRSSANSDMKA
Trigger: TGCTTTCATATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAATCATTTTCACTTTATAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360822.7
CDS-3UTR CAA 90 bp AAGTCTATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATTTCATCTCTGAAAGCTaGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: KSIWKPISLETHAGEIKNFISES*LSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAA...ATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCT +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIMVQSP*LFSRWA
Trigger: AGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCAT...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATTTCCACTCCAACTGATTTTCCGTTGAGAAATAGCTTTTCCAATTTCTCCAGCTCAGCCTGCAGGTTGTaGATACTGTCTGATTCCTGC +
Preference number: 5 (lower is better)
Translates to: ISTPTDFPLRNSFSNFSSSACRL*ILSDSC
Trigger: GCAGGAATCAGACAGTATCAACAACCTGCAGGCTGA...GCTGGAGAAATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGGAGTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAAACTCAGCCTGCAGGTaGTTGATACTGTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETNSACR*LILSDS
Trigger: GGAATCAGACAGTATCAACAACCTGCAGGCTGAGTT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTTTTTTGCAGCCTCCTTaGGAAAGGTCTTTCATAATC +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCFLQPP*ERSFII
Trigger: GATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAA...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCGCGCTGAGTGCAGTGTaGATCGGTTTCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIALSAV*IGFSSQ
Trigger: TTGGGAAGAGAAACCGATCAACACTGCACTCAGCGC...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCRDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GACTCCGTGTGCCTTAAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: DSVCLKYPFLQPPLERSFRDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...GAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGCTTTCCATGGGATATTaGTCACCATCGTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKELSMGY*SPSCLS
Trigger: TGACAAACACGATGGTGACAAATATCCCATGGAAAG...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360822.7
CDS-3UTR CAA 90 bp GCTTCTGGTCTCGTGAGAAGAAGGACTTTTCAGATGTTTCATAATCAGAGAGCGCTTTCCATGGGATATTaGTCACCATCGTGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: ASGLVRRRTFQMFHNQRALSMGY*SPSCLS
Trigger: TGACAAACACGATGGTGACAAATATCCCATGGAAAG...CGCTCTCTGATTATGAAACATCTGAAAAGTCCTTCTTCTCACGAGACCAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp GTGGAGCACCTGCACCTTTCTGACAACAACTCTCAAGCCAACTTTCAGAGAGAAAAAAATAGATTTCCTTaGGCCAGACAGCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: VEHLHLSDNNSQANFQREKNRFP*ARQLFL
Trigger: AAGAAAGAGCTGTCTGGCCAAAGGAAATCTATTTTT...TTCTCTCTGAAAGTTGGCTTGAGAGTTGTTGTCAGAAAGGTGCAGGTGCTCCAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACATTCATCTCTGAAAGCTaGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETFISES*LSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAA...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp CCTGATCTGAAATACAACATCCAAGAGCTCGAGGCCTTTTTACCACCCGTTTGTCCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: PDLKYNIQELEAFLPPVCPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...ACAAACGGGTGGTAAAAAGGCCTCGAGCTCTTGGATGTTGTATTTCAGATCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp GGCCAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGAGGGACTCTCGTAATTaGTCATTCTCCTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: GQTALSSSINRNHTWNKERDSRN*SFSFCL
Trigger: TAAACAGAAGGAGAATGACAAATTACGAGAGTCCCT...CTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTCTCTGAAACTGATTTaGGTGTCACTGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQISLKLI*VSLPGR
Trigger: CCTCCCAGGCAGTGACACCAAAATCAGTTTCAGAGA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AAATGCCTTAATCATGGTGTTCATGTGTTGACGGGAGATGACACAGATGCCATGGTGGGTTACGACCAATaGATCAAAGATGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: KCLNHGVHVLTGDDTDAMVGYDQ*IKDDFF
Trigger: GAAAAAGTCATCTTTGATCAATTGGTCGTAACCCAC...CATGGCATCTGTGTCATCTCCCGTCAACACATGAACACCATGATTAAGGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCTTTTTACCACCCGTTaGTGGAGCACCTGCACCTTT +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQILFTTR*WSTCTF
Trigger: AAAGGTGCAGGTGCTCCACAAACGGGTGGTAAAAAG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCTTCTTAGCCTCTCTGTaGGTAATACCAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIFLASL*VIPGRE
Trigger: TTCCCTCCCTGGTATTACCAACAGAGAGGCTAAGAA...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAAATCTCGTAGCTTCTTaGCTGATCACTGTCCATTTC +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETNLVAS*LITVHF
Trigger: GAAATGGACAGTGATCAGCAAAGAAGCTACGAGATT...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp ATCTGGAAACCCATTTCCCTGGAAACCCATGCAGGAGAGATCAAAAATGGTTTTGTGGGTTACGACCAATaGATCAAAGATGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: IWKPISLETHAGEIKNGFVGYDQ*IKDDFF
Trigger: GAAAAAGTCATCTTTGATCAATTGGTCGTAACCCAC...AAAACCATTTTTGATCTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS-3UTR CAA 90 bp AAGTATCCATTTTTGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCATTACTCTTCATCTCTGAAAGCTaGCTTTCCAAACGCAACCGA +
Preference number: 5 (lower is better)
Translates to: KYPFLQPPLERSFIISLLFISES*LSKRNR
Trigger: TCGGTTGCGTTTGGAAAGCAAGCTTTCAGAGATGAA...GAGTAATGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS-3UTR CAA 90 bp CAGACAGCTCTTTCTTCCTCAATAAATAGGAACCACACTTGGAACAAAGAGACAGATCTCACTGAAAAGTaGCATGTTCAAATTCTGCTC +
Preference number: 5 (lower is better)
Translates to: QTALSSSINRNHTWNKETDLTEK*HVQILL
Trigger: GAGCAGAATTTGAACATGCAACTTTTCAGTGAGATC...TGTCTCTTTGTTCCAAGTGTGGTTCCTATTTATTGAGGAAGAAAGAGCTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS-3UTR CAA 90 bp AATCATTTAATGAGAATCTTCAAACTGTGGCACTGGCTGAGTACTAAGCAAATCCCAACTGATTTTCCGTaGAGAAATAGCTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: NHLMRIFKLWHWLSTKQIPTDFP*RNSFSN
Trigger: ATTGGAAAAGCTATTTCTCAACGGAAAATCAGTTGG...GATTTGCTTAGTACTCAGCCAGTGCCACAGTTTGAAGATTCTCATTAAATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
CDS CCA 72 bp CCACCCCAGCTCTTGTTCAGACTCTGGCGGCGCCGCTaGAATTCAAACCACAGACGCCGCCATCTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: PPQLLFRLWRRR*NSNHRRRHLSR
Trigger: CCGGGAAAGATGGCGGCGTCTGTGGTTTGAATTCCAGCGGCGCCGCCAGAGTCTGAACAAGAGCTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000491334.1
CDS CCA 72 bp CCTCTTCCAACACCAAGTCCATCATGGCTACAGAGGTaGCGACAGCGTTGGTGTCTGTGGCGGCGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: PLPTPSPSWLQR*RQRWCLWRRRH
Trigger: GTGGCGCCGCCGCCACAGACACCAACGCTGTCGCCACCTCTGTAGCCATGATGGACTTGGTGTTGGAAGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000481266.1
ENST00000491334.1
CDS GCA 72 bp GCATGCTATGCCGGTTCAGAGAACACCCTACAGCTGTaGACGGCCACCTGGCTGTCCAGGTATCCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: ACYAGSENTLQL*TATWLSRYPSG
Trigger: GCCTGAGGGATACCTGGACAGCCAGGTGGCCGTGCACAGCTGTAGGGTGTTCTCTGAACCGGCATAGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS TCA 72 bp GTGAGTGGGAACCCGGACCTCGGCTGGCCTGGGTGCTaGGCCTCAGTCCTTCTATGTTTCCTGCTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: VSGNPDLGWPGC*ASVLLCFLLFL
Trigger: AAGGAACAGCAGGAAACATAGAAGGACTGAGGCTCAGCACCCAGGCCAGCCGAGGTCCGGGTTCCCACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 72 bp GGAACAAGTGAGTGGGAACCCGGACCTCGGCTGGCCTaGGTGCTGAGCCTCAGTCCTTCTATGTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GTSEWEPGPRLA*VLSLSPSMFPA
Trigger: AGCAGGAAACATAGAAGGACTGAGGCTCAGCACCCAGGCCAGCCGAGGTCCGGGTTCCCACTCACTTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 72 bp GGTTCAGAGAACACCCTACAGCTGTGCACGGCCACCTaGCTGTCCAGGTATCCCTCAGGCTCACTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GSENTLQLCTAT*LSRYPSGSLLW
Trigger: CCACAGAAGTGAGCCTGAGGGATACCTGGACAGCCAGGTGGCCGTGCACAGCTGTAGGGTGTTCTCTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS GCA 72 bp GCCATGGATATCCAGGAGAGCTGTGTGAAAGCCAAGTaGAGGGAGGATGAACCCCACCCCAAAGGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: AMDIQESCVKAK*REDEPHPKGLG
Trigger: TCCGAGCCCTTTGGGGTGGGGTTCATCCTCCCTGCACTTGGCTTTCACACAGCTCTCCTGGATATCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 72 bp CCACGGATGGTGCAGTCTCCTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTCTCCAGTCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PRMVQSPLLFSR*ASSRSFSSLSL
Trigger: GAGGGAGAGACTGGAGAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS CCA 72 bp TCACGGATGGTGCAGTCTCCTTTGCTCTTCTCTCGATaGGCTTCCTCCAGGTCCTTCTCCAGTCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SRMVQSPLLFSR*ASSRSFSSLSL
Trigger: GAGGGAGAGACTGGAGAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000480112.5
ENST00000483412.5
CDS CCA 72 bp CGTGCTCACACTGCTCACAAACTTGCTCAGTGGTGCTaGGTGTGGACCCTACACGGGGGATATGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RAHTAHKLAQWC*VWTLHGGYEGC
Trigger: ACAGCCTTCATATCCCCCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474262.5
CDS CCA 72 bp CTTGGCCGTGCTCACACTGCTCACAAACTTGCTCAGTaGTGCTGGGTGTGGACCCTACACGGGGGATATGAA +
Preference number: 6 (lower is better)
Translates to: LGRAHTAHKLAQ*CWVWTLHGGYE
Trigger: TTCATATCCCCCGTGTAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAGTGTGAGCACGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474262.5
CDS CCA 72 bp TCACACACAGATGCTCAGAGCTGCATTCTCAGCAAGTaGGGAGAGGCAGGGGCAGTACCGTGTTTGTCAGGC +
Preference number: 6 (lower is better)
Translates to: SHTDAQSCILSK*GEAGAVPCLSG
Trigger: GCCTGACAAACACGGTACTGCCCCTGCCTCTCCCCACTTGCTGAGAATGCAGCTCTGAGCATCTGTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CAA 90 bp AACAGCCCAGGAAACAGAGTGAGACCACGGATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCTTCCTCCAGGTCCTTCTCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: NSPGNRVRPRMVQSP*LFSRWASSRSFSSL
Trigger: GAGACTGGAGAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGGTCTCACTCTGTTTCCTGGGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS TCA 72 bp GGTGGTCTTACAGCCCAAAGCACAGTAGCCTCAAGGTaGGAAGGGCCTCAGTACCTCTCAGTCTCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: GGLTAQSTVASR*EGPQYLSVSCA
Trigger: AGCACAGGAGACTGAGAGGTACTGAGGCCCTTCTCACCTTGAGGCTACTGTGCTTTGGGCTGTAAGACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS TCA 72 bp CCCGACGCCTCTGAGGACATGTGCAAAGAGAAGCCCTaGCATCTTCCACAACCAAAGGGTCAGCCATCGAAG +
Preference number: 6 (lower is better)
Translates to: PDASEDMCKEKP*HLPQPKGQPSK
Trigger: CTTCGATGGCTGACCCTTTGGTTGTGGAAGATGTCAGGGCTTCTCTTTGCACATGTCCTCAGAGGCGTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS TCA 72 bp ACCCCAGGGCCAAATAACGCATCAACAACACCTCTTTaGGGCCCCGCTAAGCCACCACCTGACAGTGATGCA +
Preference number: 6 (lower is better)
Translates to: TPGPNNASTTPL*GPAKPPPDSDA
Trigger: TGCATCACTGTCAGGTGGTGGCTTAGCGGGGCCTCAAAGAGGTGTTGTTGATGCGTTATTTGGCCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS GCA 72 bp AAGCCACCACCTGACAGTGATGCAGAGGCTACAGCATaGTATGCCGGTTCAGAGAACACCCTACAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: KPPPDSDAEATA*YAGSENTLQLC
Trigger: GCACAGCTGTAGGGTGTTCTCTGAACCGGCATAGCATGCTGTAGCCTCTGCATCACTGTCAGGTGGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 72 bp CCCTGCCCAACAGTGAGTCAATCTGTGTCGCAGATCTaGATCCGTCTCACCAGGGCAAAACCAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: PCPTVSQSVSQI*IRLTRAKPRTL
Trigger: CAGAGTCCTTGGTTTTGCCCTGGTGAGACGGATCCAGATCTGCGACACAGATTGACTCACTGTTGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482047.1
CDS CCA 72 bp AGTCTAACCATTTACTGGTTTGCTCCACACCCTGGGTaGGCGGGTGGTAGAGGTGTCTGGTCCTCTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SLTIYWFAPHPG*AGGRGVWSSFS
Trigger: CGAGAAAGAGGACCAGACACCTCTACCACCCGCCCACCCAGGGTGTGGAGCAAACCAGTAAATGGTTAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CAA 72 bp GGAAACAGAGTGAGACCACGGATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCTTCCTCCAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GNRVRPRMVQSP*LFSRWASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGGTCTCACTCTGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473282.6
CDS TCA 72 bp TGCTTCTACGCAGTCTGTGGTTCTCTGTACTCTTGGTaGGGTTTTGTGAGCGCAGCGCAGCCGAAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: CFYAVCGSLYSW*GFVSAAQPKGL
Trigger: AAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGAACCACAGACTGCGTAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000483412.5
CDS GCA 72 bp AAGGTGAGAAGGGCCTCAGTACCTCTCAGTCTCCTGTaGTCTTCATCCAGCTTCTCATACGCCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KVRRASVPLSLL*SSSSFSYAFSS
Trigger: GGAGCTGAAGGCGTATGAGAAGCTGGATGAAGAGCACAGGAGACTGAGAGGTACTGAGGCCCTTCTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CCA 72 bp GGCAGAAGACCCCAGATTCACAAGGATGACTCAAGCTaGTGCCTGCATTCCAGTAGCCCACAGTCTGATCAG +
Preference number: 6 (lower is better)
Translates to: GRRPQIHKDDSS*CLHSSSPQSDQ
Trigger: CTGATCAGACTGTGGGCTACTGGAATGCAGGCACCAGCTTGAGTCATCCTTGTGAATCTGGGGTCTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433194.6
ENST00000480467.5
ENST00000484546.1
CDS CCA 72 bp ATAATCCCAGGATACCCAACGCTCCAGAGAGTCCAGTaGGGTTTAGGAACAGCCCTGGACTCGAAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: IIPGYPTLQRVQ*GLGTALDSKLE
Trigger: TTCCAGCTTCGAGTCCAGGGCTGTTCCTAAACCCCACTGGACTCTCTGGAGCGTTGGGTATCCTGGGATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CAA 72 bp TCAGGTGGGCAAATCTCAGAGTCATTCAGCAACGTTTaGTCGGGCGTTGGCCTCCCCTCCATCACTGCTTCA +
Preference number: 6 (lower is better)
Translates to: SGGQISESFSNV*SGVGLPSITAS
Trigger: TGAAGCAGTGATGGAGGGGAGGCCAACGCCCGACAAAACGTTGCTGAATGACTCTGAGATTTGCCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425647.1
CDS CAA 90 bp TCTGACACATTTGGGAGCAGACCATTTCCCAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: SDTFGSRPFPNPALG*MPSRSSGTLGTRPL
Trigger: CAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAAATGTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000481266.1
CDS TCA 72 bp TTGGGAGCAGACCATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: LGADHFPTQHWG*CHPGHLVHWEQ
Trigger: TTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCTGCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000481266.1
CDS TCA 72 bp GAGATAGGTATGGGCTCAAAGGGTGAAGTGGCCTACTaGGGGTCACATAGCTGGGAACAAGTGAGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: EIGMGSKGEVAY*GSHSWEQVSGN
Trigger: GTTCCCACTCACTTGTTCCCAGCTATGTGACCCTCAGTAGGCCACTTCACCCTTTGAGCCCATACCTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS GCA 72 bp GACCCCAGATTCACAAGGATGACTCAAGCTGGTGCCTaGATTCCAGTAGCCCACAGTCTGATCAGAACACAG +
Preference number: 6 (lower is better)
Translates to: DPRFTRMTQAGA*IPVAHSLIRTQ
Trigger: CTGTGTTCTGATCAGACTGTGGGCTACTGGAATGCAGGCACCAGCTTGAGTCATCCTTGTGAATCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433194.6
ENST00000480467.5
ENST00000484546.1
CDS GCA 72 bp TCAGAAGTTCACATGTCACACACAGATGCTCAGAGCTaGATTCTCAGCAAGTGGGGAGAGGCAGGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: SEVHMSHTDAQS*ILSKWGEAGAV
Trigger: TACTGCCCCTGCCTCTCCCCACTTGCTGAGAATGCAGCTCTGAGCATCTGTGTGTGACATGTGAACTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CAA 90 bp TCTTCTGACACATTTGGGAGCACATTTCCCAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: SSDTFGSTFPNPALG*MPSRSSGTLGTRPL
Trigger: CAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGTGCTCCCAAATGTGTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS CAA 90 bp CCTGGTTTTGTGTACTTACGACCATTTCCCAACCCAGCATTGGGGTaGATGCCATCCAGGTCATCTGGTACACTGGGAACAAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: PGFVYLRPFPNPALG*MPSRSSGTLGTRPL
Trigger: CAGTGGCCTTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCGTAAGTACACAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491334.1
CDS TCA 72 bp CTTCAACTCCTCAATCAGTCTTGCCCTGCCCAACAGTaGGTCAATCTGTGTCGCAGATCTGGATCCGTCTCA +
Preference number: 6 (lower is better)
Translates to: LQLLNQSCPAQQ*VNLCRRSGSVS
Trigger: TGAGACGGATCCAGATCTGCGACACAGATTGACTCACTGTTGGGCAGGGCAAGACTGATTGAGGAGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482047.1
CDS TCA 72 bp CATTTGGGAGCACATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: HLGAHFPTQHWG*CHPGHLVHWEQ
Trigger: TTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGTGCTCCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS GCA 72 bp AAGCTCTCAACTGCTTTGGAGGCTTTGATGAGCAGCTaGTCTCTCTCCTGGAGTTCCCGCTTCAGACTTTCT +
Preference number: 6 (lower is better)
Translates to: KLSTALEALMSS*SLSWSSRFRLS
Trigger: AGAAAGTCTGAAGCGGGAACTCCAGGAGAGAGAGCAGCTGCTCATCAAAGCCTCCAAAGCAGTTGAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS GCA 72 bp TCATCCAGGACCAGAGCCATCGCCAAGTCCCCCTCGTaGATCTTCTTCATCTCTGAAAGCTTGCTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SSRTRAIAKSPS*IFFISESLLSK
Trigger: TTTGGAAAGCAAGCTTTCAGAGATGAAGAAGATGCACGAGGGGGACTTGGCGATGGCTCTGGTCCTGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000472883.1
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS GCA 72 bp AGAAGACCCCAGATTCACAAGGATGACTCAAGCTGGTaGCTGCATTCCAGTAGCCCACAGTCTGATCAGAAC +
Preference number: 6 (lower is better)
Translates to: RRPQIHKDDSSW*LHSSSPQSDQN
Trigger: GTTCTGATCAGACTGTGGGCTACTGGAATGCAGGCACCAGCTTGAGTCATCCTTGTGAATCTGGGGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433194.6
ENST00000480467.5
ENST00000484546.1
CDS CAA 72 bp TTAATGCTTCTACGCAGTCTGTGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGCAGCGCAGCCGAAAGG +
Preference number: 6 (lower is better)
Translates to: LMLLRSLWFSVL*VRFCERSAAER
Trigger: CCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGAACCACAGACTGCGTAGAAGCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000483412.5
CDS CAA 90 bp GTGATCTTCTTAATGCTTCTACGCAGTCTGTGGTTCTCTGTACTCTaGGTGAGGTTTTGTGAGCGCAGCGCAGCCGAAAGGGCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: VIFLMLLRSLWFSVL*VRFCERSAAERASF
Trigger: AAAGGAAGCCCTTTCGGCTGCGCTGCGCTCACAAAACCTCACCAAGAGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000483412.5
CDS TCA 72 bp CCTTGGAGCAGCACAAAGTCCTCGGAGCTCTCCAGATaGCACATTCTCATCAGGACATGCCATCTGAGATTT +
Preference number: 6 (lower is better)
Translates to: PWSSTKSSELSR*HILIRTCHLRF
Trigger: AAATCTCAGATGGCATGTCCTGATGAGAATGTGTCATCTGGAGAGCTCCGAGGACTTTGTGCTGCTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
ENST00000482047.1
ENST00000483412.5
CDS TCA 72 bp CATGTTCCGTGCTCTGGTGGGAGACACTGTTTCTTCTaGCACATTTGGGAGCACATTTCCCAACCCAGCATT +
Preference number: 6 (lower is better)
Translates to: HVPCSGGRHCFF*HIWEHISQPSI
Trigger: AATGCTGGGTTGGGAAATGTGCTCCCAAATGTGTCAGAAGAAACAGTGTCTCCCACCAGAGCACGGAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473282.6
ENST00000480112.5
CDS TCA 72 bp TGTACTTACGACCATTTCCCAACCCAGCATTGGGGTTaGTGCCATCCAGGTCATCTGGTACACTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: CTYDHFPTQHWG*CHPGHLVHWEQ
Trigger: TTGTTCCCAGTGTACCAGATGACCTGGATGGCATCAACCCCAATGCTGGGTTGGGAAATGGTCGTAAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491334.1
CDS GCA 72 bp TCCATGGGATATTTGTCACCATCTCTCAGTCTCCTGTaGTCTTCATCCAGCTTCTCATACGCCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SMGYLSPSLSLL*SSSSFSYAFSS
Trigger: GGAGCTGAAGGCGTATGAGAAGCTGGATGAAGAGCACAGGAGACTGAGAGATGGTGACAAATATCCCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360190.8
CDS CCA 72 bp AGCCTCCTCTGTTTGTTCTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAAACCCATGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SLLCLFCRRKSI*KPISLETHAGE
Trigger: CTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360822.7
CDS CAA 72 bp ACTTCATTTCTAAGATCACGGATGGTGCAGTCTCCTTaGCTCTTCTCTCGATGGGCTTCCTCCAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: TSFLRSRMVQSP*LFSRWASSRSF
Trigger: GAAGGACCTGGAGGAAGCCCATCGAGAGAAGAGCAAAGGAGACTGCACCATCCGTGATCTTAGAAATGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000480112.5
ENST00000483412.5
CDS CAA 72 bp CTAAGCTCCAGGTTTCCTCTGGCCTTCCGAAGGATTTaGTGGGTTACGACCACTGAGGAGAGAGCAAAGAAT +
Preference number: 6 (lower is better)
Translates to: LSSRFPLAFRRI*WVTTTEERAKN
Trigger: ATTCTTTGCTCTCTCCTCAGTGGTCGTAACCCACAAAATCCTTCGGAAGGCCAGAGGAAACCTGGAGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495406.1
CDS CCA 72 bp TCCTGGGTGATCTTCTTAATGCTTCTACGCAGTCTGTaGTTCTCTGTACTCTTGGTGAGGTTTTGTGAGCGC +
Preference number: 6 (lower is better)
Translates to: SWVIFLMLLRSL*FSVLLVRFCER
Trigger: GCGCTCACAAAACCTCACCAAGAGTACAGAGAACCACAGACTGCGTAGAAGCATTAAGAAGATCACCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000483412.5
CDS CCA 72 bp CAGAAGCTCTGTTTGTTCTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAAACCCATGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: QKLCLFCRRKSI*KPISLETHAGE
Trigger: CTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS CAA 90 bp AAATGCTGGTCACTCAGGAAATTAATCTCGTCATCCTCCCCAATTTaGATCGTGTCCTCGTCCTCCTTGCTAGCCAGAAGCTCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: KCWSLRKLISSSSPI*IVSSSSLLARSSVC
Trigger: ACAAACAGAGCTTCTGGCTAGCAAGGAGGACGAGGACACGATCAAAATTGGGGAGGATGACGAGATTAATTTCCTGAGTGACCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349780.9
ENST00000360190.8
CDS GCA 72 bp AGGAGTATTCTTTTAGTTAGGAGATCTTCCACCTGCTaGACCTTCTTTCGAGCATCTTCTTTCACCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RSILLVRRSSTC*TFFRASSFTRW
Trigger: CCAGCGGGTGAAAGAAGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS TCA 72 bp AAAGTGAAAATGATTCTTCCCGCCTCCGAATTTCGCTaGTCTGCTCCTCCAAGGTCTTCCGCAAATTCTGAT +
Preference number: 6 (lower is better)
Translates to: KVKMILPASEFR*SAPPRSSANSD
Trigger: ATCAGAATTTGCGGAAGACCTTGGAGGAGCAGATCAGCGAAATTCGGAGGCGGGAAGAATCATTTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360822.7
CDS CCA 72 bp CATAATCTCTGTTTGTTCTGTAGACGCAAGTCTATCTaGAAACCCATTTCCCTGGAAACCCATGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HNLCLFCRRKSI*KPISLETHAGE
Trigger: CTCTCCTGCATGGGTTTCCAGGGAAATGGGTTTCCAGATAGACTTGCGTCTACAGAACAAACAGAGATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416449.5
ENST00000483412.5
CDS CCA 72 bp GAACATCTTCAGGATTTTCTTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGCAAATCTCAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: EHLQDFLCMMAS*QGHQVGKSQSH
Trigger: ATGACTCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425647.1
CDS CCA 72 bp CAGGCAACCTTTCCAGGAATATCTCTGGCACCACTCTaGAGATTTCCTACAAAATTAACCATGATTCCCTGC +
Preference number: 6 (lower is better)
Translates to: QATFPGISLAPL*RFPTKLTMIPC
Trigger: GCAGGGAATCATGGTTAATTTTGTAGGAAATCTCCAGAGTGGTGCCAGAGATATTCCTGGAAAGGTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468989.1
CDS CCA 72 bp GAACATCTTCAGGATTTTCTTTGCATGATGGCAAGCTaGCAAGGTCATCAGGTGGGCAAATCTCAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: EHLQDFLCMMAS*QGHQVGKSQSL
Trigger: AAGACTCTGAGATTTGCCCACCTGATGACCTTGCCAGCTTGCCATCATGCAAAGAAAATCCTGAAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468989.1
CDS CCA 72 bp TACAGCATGTCAGCTATCAATGGAAAGACACCTCTGTaGGGCAAAGGCATCATTCAGAAGTTCACATGTCAC +
Preference number: 6 (lower is better)
Translates to: YSMSAINGKTPL*GKGIIQKFTCH
Trigger: GTGACATGTGAACTTCTGAATGATGCCTTTGCCCCACAGAGGTGTCTTTCCATTGATAGCTGACATGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS TCA 72 bp GCAAGTAGCAAGAATTACACGAATGATGAGTCATTCTaGCCAAGGACAGCAGCAAAGGCATGTCACAGAGAA +
Preference number: 6 (lower is better)
Translates to: ASSKNYTNDESF*PRTAAKACHRE
Trigger: TTCTCTGTGACATGCCTTTGCTGCTGTCCTTGGTCAGAATGACTCATCATTCGTGTAATTCTTGCTACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484546.1
CDS GCA 72 bp AAAAGGAGTATTCTTTTAGTTAGGAGATCTTCCACCTaGTGCACCTTCTTTCGAGCATCTTCTTTCACCCGC +
Preference number: 6 (lower is better)
Translates to: KRSILLVRRSST*CTFFRASSFTR
Trigger: GCGGGTGAAAGAAGATGCTCGAAAGAAGGTGCAGCAGGTGGAAGATCTCCTAACTAAAAGAATACTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349780.9
ENST00000360190.8
ENST00000360822.7
ENST00000472883.1
ENST00000473282.6
ENST00000480112.5
ENST00000481266.1
CDS GCA 72 bp CCTTTGTTTTTCATCTCTAGAGCAAAGAGGACAGGCTaGCTGATTGCTTGGAGTCTAACCATTTACTGGTTT +
Preference number: 6 (lower is better)
Translates to: PLFFISRAKRTG*LIAWSLTIYWF
Trigger: AAACCAGTAAATGGTTAGACTCCAAGCAATCAGGCAGCCTGTCCTCTTTGCTCTAGAGATGAAAAACAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS TCA 72 bp TTCAATTTTCAACACAATTCTCCACACAACAGGTGCTaGGAGACATGTTTTACAGAGATAGGTATGGGCTCA +
Preference number: 6 (lower is better)
Translates to: FNFQHNSPHNRC*ETCFTEIGMGS
Trigger: TGAGCCCATACCTATCTCTGTAAAACATGTCTCTCAGCACCTGTTGTGTGGAGAATTGTGTTGAAAATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483412.5
CDS CAA 72 bp GAAATCTTAGACTCCGTGTGCCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCT +
Preference number: 6 (lower is better)
Translates to: EILDSVCLKYPF*QPPLERSFIIS
Trigger: AGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416449.5
ENST00000483412.5
CDS CAA 90 bp TCACAATCTGAAATCTTAGACTCCGTGTGCCTTAAGTATCCATTTTaGCAGCCTCCTTTGGAAAGGTCTTTCATAATCTCTGTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SQSEILDSVCLKYPF*QPPLERSFIISVCS
Trigger: AGAACAAACAGAGATTATGAAAGACCTTTCCAAAGGAGGCTGCAAAAATGGATACTTAAGGCACACGGAGTCTAAGATTTCAGATTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416449.5
ENST00000483412.5