RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK5RAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101391

Ensembl transcript IDs: ENST00000339269.5, ENST00000346416.7, ENST00000357886.8, ENST00000427097.5, ENST00000460043.5, ENST00000461356.5, ENST00000461710.5, ENST00000471264.5, ENST00000473791.1, ENST00000473997.5, ENST00000477105.5, ENST00000481964.5, ENST00000482967.5, ENST00000488723.1, ENST00000496381.5, ENST00000498525.5

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRPQQQQ*PGSRSV
Trigger: TACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEPQQQQ*PGSRSV
Trigger: TACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIPQQQQ*PGSRSV
Trigger: TACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGAGCTCCATCCTCCTaGCTCTCTGGACTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQRAPSS*LSGLPQ
Trigger: CTGCGGGAGTCCAGAGAGGCAGGAGGATGGAGCTCG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQPQRKF*RQVGSP
Trigger: AGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCGAGCTCCATCCTCCTaGCTCTCTGGACTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRAPSS*LSGLGH
Trigger: GTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQPPTHG*FHSGLA
Trigger: TGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSPPTHG*FHSGLA
Trigger: TGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGACGTTGGCAGCTTGCTaGCCCGACTCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRTLAAC*PDSATA
Trigger: GGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGACGTTGGCAGCTTGCTaGCCCGACTCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQTLAAC*PDSATA
Trigger: GGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGAGAGAGCAGCACGTTaGCAGCTTGCTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQERAAR*QLAGPT
Trigger: AGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAGAGAGCAGCACGTTaGCAGCTTGCTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEERAAR*QLAGPT
Trigger: AGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAGGCAGACGTGGCACTaGCGCTTGTCTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQRQTWH*RLSGLA
Trigger: TGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGGCAGACGTGGCACTaGCGCTTGTCTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRQTWH*RLSGLA
Trigger: TGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAGGCAGACGTGGCACTaGCGCTTGTCTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQRQTWH*RLSGLA
Trigger: TGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAGGCAGACGTGGCACTaGCGCTTGTCTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRRQTWH*RLSGLA
Trigger: TGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRRLLPL*AGRWIC
Trigger: ACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQRLLPL*AGRWIC
Trigger: ACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCAGCCAGCCTGGAGCTaGAATCCTTCCGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSQPAWS*NPSELH
Trigger: ATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCAGCCAGCCTGGAGCTaGAATCCTTCCGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQQPAWS*NPSELH
Trigger: ATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCAGCCAGCCTGGAGCTaGAATCCTTCCGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRQPAWS*NPSELH
Trigger: ATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTCTCCCTGCCCCGGGTaGAAGGAACAATGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQSPCPG*KEQCSS
Trigger: GCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTGCCCAAGTCAGCTCTaGGGCCATCCTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSCPSQL*GHPLRS
Trigger: TGACCTGAGAGGATGGCCTCAGAGCTGACTTGGGCA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTGCCCAAGTCAGCTCTaGGGCCATCCTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQCPSQL*GHPLRS
Trigger: TGACCTGAGAGGATGGCCTCAGAGCTGACTTGGGCA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSPQRKF*RQVGSP
Trigger: AGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSPQRKF*RQVGSP
Trigger: AGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGG...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGAGCTCCATCCTCCTaGCTCTCTGGACTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIRAPSS*LSGLGH
Trigger: GTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCGAGCTCCATCCTCCTaGCTCTCTGGACTGGGACAC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSRAPSS*LSGLGH
Trigger: GTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGCACGTTGGCAGCTTaGTGGCCCGACTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSSTLAA*WPDSAT
Trigger: TGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAGCACGTTGGCAGCTTaGTGGCCCGACTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSESTLAA*WPDSAT
Trigger: TGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAGCACGTTGGCAGCTTaGTGGCCCGACTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQSTLAA*WPDSAT
Trigger: TGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSPPTHG*FHSGLA
Trigger: TGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGG...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGACACAGAGGCCAATaGTCCCCACCCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRHRGQ*SPPQRP
Trigger: AGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAGACACAGAGGCCAATaGTCCCCACCCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQRHRGQ*SPPQRP
Trigger: AGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCACGTTGGCAGCTTGCTaGCCCGACTCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAITLAAC*PDSATA
Trigger: GGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCACGTTGGCAGCTTGCTaGCCCGACTCAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSTLAAC*PDSATA
Trigger: GGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGAGAGAGCAGCACGTTaGCAGCTTGCTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSERAAR*QLAGPT
Trigger: AGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAGGCAGACGTGGCACTaGCGCTTGTCTGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIRQTWH*RLSGLA
Trigger: TGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIRLLPL*AGRWIC
Trigger: ACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAATATCCCCTCCGCATaGCCTCCAACACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSNIPSA*PPTHGC
Trigger: GCAGCCGTGTGTTGGAGGCCATGCGGAGGGGATATT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTTTGGGAGGCCGAGGTaGGAGGAACACCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQFGRPR*EEHLLR
Trigger: TCTGAGCAGGTGTTCCTCCCACCTCGGCCTCCCAAA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357886.8
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGATCCTCCTGCCTCTCTaGACTCCCGCAGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEILLPL*TPAAAT
Trigger: TGTTGCTGCTGCGGGAGTCCAGAGAGGCAGGAGGAT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTCTCCCTGCCCCGGGTaGAAGGAACAATGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAISPCPG*KEQCSS
Trigger: GCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTCTCCCTGCCCCGGGTaGAAGGAACAATGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSSPCPG*KEQCSS
Trigger: GCTACTGCATTGTTCCTTTCACCCGGGGCAGGGAGA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGAGACTGTCTGGACGTaGTCTTCCTCCGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRETVWT*SSSVSP
Trigger: TGGTGAGACGGAGGAAGATCACGTCCAGACAGTCTC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAGACTGTCTGGACGTaGTCTTCCTCCGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEETVWT*SSSVSP
Trigger: TGGTGAGACGGAGGAAGATCACGTCCAGACAGTCTC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTGCCCAAGTCAGCTCTaGGGCCATCCTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSCPSQL*GHPLRS
Trigger: TGACCTGAGAGGATGGCCTCAGAGCTGACTTGGGCA...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTGCCCAAGTCAGCTCTaGGGCCATCCTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSCPSQL*GHPLRS
Trigger: TGACCTGAGAGGATGGCCTCAGAGCTGACTTGGGCA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTCACAGGTCCGCCGCTaGGTTCATACACAAGCGACT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRSQVRR*VHTQAT
Trigger: AGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGA...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339269.5
ENST00000357886.8
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTCACAGGTCCGCCGCTaGGTTCATACACAAGCGACT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQSQVRR*VHTQAT
Trigger: AGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339269.5
ENST00000357886.8
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCACCCCAGAGACCTCTaGACTTGGAGGACACACTGT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEHPRDL*TWRTHC
Trigger: ACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCACCCCAGAGACCTCTaGACTTGGAGGACACACTGT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQHPRDL*TWRTHC
Trigger: ACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAGAGAGACTGCTGTGTaGCCTGCACATCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSERETAV*PAHPQR
Trigger: TCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAGCACGTTGGCAGCTTaGTGGCCCGACTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAISTLAA*WPDSAT
Trigger: TGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAGCACGTTGGCAGCTTaGTGGCCCGACTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSSTLAA*WPDSAT
Trigger: TGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCCTCTTGGAGGTTACTaGTCCGCAGGTAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSPLGGY*SAGSHS
Trigger: AGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCTCTTGGAGGTTACTaGTCCGCAGGTAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQPLGGY*SAGSHS
Trigger: AGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCTCTTGGAGGTTACTaGTCCGCAGGTAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRPLGGY*SAGSHS
Trigger: AGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGCACTGGCGCTTGTCTaGACTGGCATGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSALALV*TGMTSA
Trigger: TGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCACTGGCGCTTGTCTaGACTGGCATGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEALALV*TGMTSA
Trigger: TGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCACACAAAGGCAGACGTaGCACTGGCGCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSTQRQT*HWRLSG
Trigger: TCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGACACAAAGGCAGACGTaGCACTGGCGCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSETQRQT*HWRLSG
Trigger: TCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGACACAAAGGCAGACGTaGCACTGGCGCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRTQRQT*HWRLSG
Trigger: TCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAATATCCCCTCCGCATaGCCTCCAACACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAINIPSA*PPTHGC
Trigger: GCAGCCGTGTGTTGGAGGCCATGCGGAGGGGATATT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTAATATCCCCTCCGCATaGCCTCCAACACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSNIPSA*PPTHGC
Trigger: GCAGCCGTGTGTTGGAGGCCATGCGGAGGGGATATT...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTCCACTAGCACCAACTaGGTACAGCCCACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRSTSTN*VQPTEV
Trigger: GACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGA...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTCCACTAGCACCAACTaGGTACAGCCCACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQSTSTN*VQPTEV
Trigger: GACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCCACTAGCACCAACTaGGTACAGCCCACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSSTSTN*VQPTEV
Trigger: GACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTCTCCCCTTCCTGTTaGGGAGGATTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEVSPSC*GGLPKS
Trigger: TGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGAC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGTCTCCCCTTCCTGTTaGGGAGGATTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQVSPSC*GGLPKS
Trigger: TGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGAC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGTCTCCCCTTCCTGTTaGGGAGGATTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRVSPSC*GGLPKS
Trigger: TGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGAC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTGTCACAGCCTCGCATaGTTGACACAAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSCHSLA*LTQRQT
Trigger: CGTCTGCCTTTGTGTCAATCATGCGAGGCTGTGACA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTGTCACAGCCTCGCATaGTTGACACAAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQCHSLA*LTQRQT
Trigger: CGTCTGCCTTTGTGTCAATCATGCGAGGCTGTGACA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGAGACTGTCTGGACGTaGTCTTCCTCCGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSETVWT*SSSVSP
Trigger: TGGTGAGACGGAGGAAGATCACGTCCAGACAGTCTC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGACTGTCTGGACGTaGTCTTCCTCCGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSETVWT*SSSVSP
Trigger: TGGTGAGACGGAGGAAGATCACGTCCAGACAGTCTC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTGTCTGAGAACTGGCTaGGGTGATCTTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQCLRTG*GDLHQH
Trigger: GTGCTGGTGAAGATCACCTCAGCCAGTTCTCAGACA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTGTCTGAGAACTGGCTaGGGTGATCTTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSCLRTG*GDLHQH
Trigger: GTGCTGGTGAAGATCACCTCAGCCAGTTCTCAGACA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGTGTCCCCTAAGTGTCTaGGAACTGGCTGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSECPLSV*ELAEVI
Trigger: GATCACCTCAGCCAGTTCTCAGACACTTAGGGGACA...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAGAGAGACTGCTGTGTaGCCTGCACATCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIRETAV*PAHPQR
Trigger: TCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAGAGAGACTGCTGTGTaGCCTGCACATCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSRETAV*PAHPQR
Trigger: TCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCGGTTCCAGATGGTCTaGTCAGCCTTCTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSERFQMV*SAFSLI
Trigger: TATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCGGTTCCAGATGGTCTaGTCAGCCTTCTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQRFQMV*SAFSLI
Trigger: TATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGGTTTCCATCATTCCTaGCACACAGGTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRGFHHS*HTGQWQ
Trigger: CTGCCACTGACCTGTGTGGCAGGAATGATGGAAACC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGTTTCCATCATTCCTaGCACACAGGTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEGFHHS*HTGQWQ
Trigger: CTGCCACTGACCTGTGTGGCAGGAATGATGGAAACC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGGTTTCCATCATTCCTaGCACACAGGTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSGFHHS*HTGQWQ
Trigger: CTGCCACTGACCTGTGTGGCAGGAATGATGGAAACC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCTCTTGGAGGTTACTaGTCCGCAGGTAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIPLGGY*SAGSHS
Trigger: AGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGATCACATCTGCCTCTTaGAGGTTACTGGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQITSAS*RLLVRR
Trigger: CCTGCGGACCAGTAACCTCCAAGAGGCAGATGTGAT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGATCACATCTGCCTCTTaGAGGTTACTGGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEITSAS*RLLVRR
Trigger: CCTGCGGACCAGTAACCTCCAAGAGGCAGATGTGAT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTAAACGGTTCCAGATaGTCTGCTCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEVNGSR*SAQPSP
Trigger: GGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTAC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGTAAACGGTTCCAGATaGTCTGCTCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRVNGSR*SAQPSP
Trigger: GGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTAC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQGACLD*HDISIG
Trigger: ACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSGACLD*HDISIG
Trigger: ACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGCACTGGCGCTTGTCTaGACTGGCATGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIALALV*TGMTSA
Trigger: TGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGCACTGGCGCTTGTCTaGACTGGCATGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSALALV*TGMTSA
Trigger: TGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCACACAAAGGCAGACGTaGCACTGGCGCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSTQRQT*HWRLSG
Trigger: TCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGCTTCCACTCTGGGCTaGCAGGTGGATCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQASTLG*QVDLFT
Trigger: TGTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGCTTCCACTCTGGGCTaGCAGGTGGATCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQASTLG*QVDLFT
Trigger: TGTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTCCACTAGCACCAACTaGGTACAGCCCACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSSTSTN*VQPTEV
Trigger: GACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGTCTCCCCTTCCTGTTaGGGAGGATTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSVSPSC*GGLPKS
Trigger: TGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGAC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGTCTCCCCTTCCTGTTaGGGAGGATTGCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIVSPSC*GGLPKS
Trigger: TGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGAC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGACCTGTTTCCTCAGTaGCAGGCAATGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSDLFPQ*QAMSPL
Trigger: AAGGGGAGACATTGCCTGCCACTGAGGAAACAGGTC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGACCTGTTTCCTCAGTaGCAGGCAATGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEDLFPQ*QAMSPL
Trigger: AAGGGGAGACATTGCCTGCCACTGAGGAAACAGGTC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGACCTGTTTCCTCAGTaGCAGGCAATGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQDLFPQ*QAMSPL
Trigger: AAGGGGAGACATTGCCTGCCACTGAGGAAACAGGTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGATACAAAGGCAGACGTaGCACTGGCGCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEIQRQT*HWRLSG
Trigger: TCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTAT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427097.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGAAGACAGCTTCTCCTaGGGAGCTGAGGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQEDSFS*GAEALF
Trigger: AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRLSGLA*HQHRSR
Trigger: ACGAGACCTATGCTGATGTCATGCCAGTCCAGACAA...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSLSGLA*HQHRSR
Trigger: ACGAGACCTATGCTGATGTCATGCCAGTCCAGACAA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTGTCACAGCCTCGCATaGTTGACACAAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSCHSLA*LTQRQT
Trigger: CGTCTGCCTTTGTGTCAATCATGCGAGGCTGTGACA...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCACATAAGCTTCTCTTaGATATCCCCTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRHISFS*ISPPHG
Trigger: GCCATGCGGAGGGGATATTCAAGAGAAGCTTATGTG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCACATAAGCTTCTCTTaGATATCCCCTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQHISFS*ISPPHG
Trigger: GCCATGCGGAGGGGATATTCAAGAGAAGCTTATGTG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAAGCCCATGTTGTACTaGACTTCCCGGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRKPMLY*TSRSKE
Trigger: CTCTTTGCTCCGGGAAGTTCAGTACAACATGGGCTT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAAGCCCATGTTGTACTaGACTTCCCGGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQKPMLY*TSRSKE
Trigger: CTCTTTGCTCCGGGAAGTTCAGTACAACATGGGCTT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAAGCCCATGTTGTACTaGACTTCCCGGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQKPMLY*TSRSKE
Trigger: CTCTTTGCTCCGGGAAGTTCAGTACAACATGGGCTT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEQPTEV*LAFVAS
Trigger: AGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQQPTEV*LAFVAS
Trigger: AGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSQPTEV*LAFVAS
Trigger: AGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGAGAACTGGCTGAGGTaGTCTTCACCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQENWLR*SSPAHS
Trigger: ACTATGTGCTGGTGAAGATCACCTCAGCCAGTTCTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGAGAACTGGCTGAGGTaGTCTTCACCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSENWLR*SSPAHS
Trigger: ACTATGTGCTGGTGAAGATCACCTCAGCCAGTTCTC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTGTCTGAGAACTGGCTaGGGTGATCTTCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAICLRTG*GDLHQH
Trigger: GTGCTGGTGAAGATCACCTCAGCCAGTTCTCAGACA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTGTCCCCTAAGTGTCTaGGAACTGGCTGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSCPLSV*ELAEVI
Trigger: GATCACCTCAGCCAGTTCTCAGACACTTAGGGGACA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTGTCCCCTAAGTGTCTaGGAACTGGCTGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSCPLSV*ELAEVI
Trigger: GATCACCTCAGCCAGTTCTCAGACACTTAGGGGACA...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCGGTTCCAGATGGTCTaGTCAGCCTTCTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSRFQMV*SAFSLI
Trigger: TATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGGTTTCCATCATTCCTaGCACACAGGTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIGFHHS*HTGQWQ
Trigger: CTGCCACTGACCTGTGTGGCAGGAATGATGGAAACC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGGTTTCCATCATTCCTaGCACACAGGTCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSGFHHS*HTGQWQ
Trigger: CTGCCACTGACCTGTGTGGCAGGAATGATGGAAACC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGAGATTGGTAGGCACTaGACTGTTGAACTGGACCTC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQEIGRH*TVELDL
Trigger: GAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGGTGGGAGGAACACCTaGTCAGAAAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQGGRNT*SESFFT
Trigger: AGTGAAGAAGCTTTCTGAGCAGGTGTTCCTCCCACC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357886.8
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAGAGACCTCTGCACTTaGAGGACACACTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSERDLCT*RTHCKG
Trigger: CCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGAGACCTCTGCACTTaGAGGACACACTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRDLCT*RTHCKG
Trigger: CCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAGAGACCTCTGCACTTaGAGGACACACTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRRDLCT*RTHCKG
Trigger: CCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCATCCTCCTGCCTCTCTaGACTGGGACACATGGTACT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSILLPL*TGTHGT
Trigger: AGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGAT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCATCCTCCTGCCTCTCTaGACTGGGACACATGGTACT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIILLPL*TGTHGT
Trigger: AGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGAT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCATCACATCTGCCTCTTaGAGGTTACTGGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIITSAS*RLLVRR
Trigger: CCTGCGGACCAGTAACCTCCAAGAGGCAGATGTGAT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGTAAACGGTTCCAGATaGTCTGCTCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSVNGSR*SAQPSP
Trigger: GGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTAC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGTAAACGGTTCCAGATaGTCTGCTCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSVNGSR*SAQPSP
Trigger: GGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTAC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIGACLD*HDISIG
Trigger: ACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSGACLD*HDISIG
Trigger: ACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGCTTCCACTCTGGGCTaGCAGGTGGATCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSASTLG*QVDLFT
Trigger: TGTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAAGAGTCCCTCAGAGTaGTCCTGCAGAGAACATGTC +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEKSPSE*SCREHV
Trigger: GACATGTTCTCTGCAGGACCACTCTGAGGGACTCTT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAAGAGTCCCTCAGAGTaGTCCTGCAGAGAACATGTC +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQKSPSE*SCREHV
Trigger: GACATGTTCTCTGCAGGACCACTCTGAGGGACTCTT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAAGAGTCCCTCAGAGTaGTCCTGCAGAGAACATGTC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRKSPSE*SCREHV
Trigger: GACATGTTCTCTGCAGGACCACTCTGAGGGACTCTT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAAGAGTCCCTCAGAGTaGTCCTGCAGAGAACATGTC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSKSPSE*SCREHV
Trigger: GACATGTTCTCTGCAGGACCACTCTGAGGGACTCTT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGACCTGTTTCCTCAGTaGCAGGCAATGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSDLFPQ*QAMSPL
Trigger: AAGGGGAGACATTGCCTGCCACTGAGGAAACAGGTC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGACCTGTTTCCTCAGTaGCAGGCAATGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSDLFPQ*QAMSPL
Trigger: AAGGGGAGACATTGCCTGCCACTGAGGAAACAGGTC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGACTGCACTGTTGAACTaGACCTCCGAATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQTALLN*TSELSR
Trigger: TCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGACTGCACTGTTGAACTaGACCTCCGAATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQTALLN*TSELSR
Trigger: TCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGACTGCACTGTTGAACTaGACCTCCGAATTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSETALLN*TSELSR
Trigger: TCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAAGACAGCTTCTCCTaGGGAGCTGAGGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSEDSFS*GAEALF
Trigger: AAAAAGTGCCTCAGCTCCTCAGGAGAAGCTGTCTTC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQEVHPS*DREVGL
Trigger: AAGACCCACCTCCCTATCTCATGATGGATGAACTTC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQEVHPS*DREVGL
Trigger: AAGACCCACCTCCCTATCTCATGATGGATGAACTTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSEVHPS*DREVGL
Trigger: AAGACCCACCTCCCTATCTCATGATGGATGAACTTC...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAILSGLA*HQHRSR
Trigger: ACGAGACCTATGCTGATGTCATGCCAGTCCAGACAA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCACATAAGCTTCTCTTaGATATCCCCTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSHISFS*ISPPHG
Trigger: GCCATGCGGAGGGGATATTCAAGAGAAGCTTATGTG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAAGCCCATGTTGTACTaGACTTCCCGGAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSKPMLY*TSRSKE
Trigger: CTCTTTGCTCCGGGAAGTTCAGTACAACATGGGCTT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCATCCTTCAGCCTATaGTATGCCCGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSSSFSL*YARVFC
Trigger: ACAGAAGACACGGGCATATCATAGGCTGAAGGATGA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTCATCCTTCAGCCTATaGTATGCCCGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQSSFSL*YARVFC
Trigger: ACAGAAGACACGGGCATATCATAGGCTGAAGGATGA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSQPTEV*LAFVAS
Trigger: AGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAACTGGCTGAGGTaGTCTTCACCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSENWLR*SSPAHS
Trigger: ACTATGTGCTGGTGAAGATCACCTCAGCCAGTTCTC...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGAGAACTGGCTGAGGTaGTCTTCACCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIENWLR*SSPAHS
Trigger: ACTATGTGCTGGTGAAGATCACCTCAGCCAGTTCTC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTTATCTCCACCTTCATaGCCTGTTTCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSLSPPS*PVSSVA
Trigger: TGCCACTGAGGAAACAGGTCATGAAGGTGGAGATAA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTTATCTCCACCTTCATaGCCTGTTTCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQLSPPS*PVSSVA
Trigger: TGCCACTGAGGAAACAGGTCATGAAGGTGGAGATAA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTTATCTCCACCTTCATaGCCTGTTTCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQLSPPS*PVSSVA
Trigger: TGCCACTGAGGAAACAGGTCATGAAGGTGGAGATAA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGACACGTTTTCCACTaGCATAAAGTTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRHVFH*HKVASP
Trigger: GGGCGAAGCAACTTTATGTCAGTGGAAAACGTGTCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAGACACGTTTTCCACTaGCATAAAGTTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQRHVFH*HKVASP
Trigger: GGGCGAAGCAACTTTATGTCAGTGGAAAACGTGTCT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGACACACTGTAAAGGGTaGATGGCACTAAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSETHCKG*MALNSP
Trigger: TGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTCAACCTCTCAGCCATaGAGCCTAGAATTCCAATCC +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRSTSQP*SLEFQS
Trigger: GGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGA...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTCAACCTCTCAGCCATaGAGCCTAGAATTCCAATCC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQSTSQP*SLEFQS
Trigger: GGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGACATCCTCCATCTCTaGATCAGGGAAGATCACCTT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQDILHL*IREDHL
Trigger: AAGGTGATCTTCCCTGATGCAGAGATGGAGGATGTC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGACATCCTCCATCTCTaGATCAGGGAAGATCACCTT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEDILHL*IREDHL
Trigger: AAGGTGATCTTCCCTGATGCAGAGATGGAGGATGTC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGACATCCTCCATCTCTaGATCAGGGAAGATCACCTT +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQDILHL*IREDHL
Trigger: AAGGTGATCTTCCCTGATGCAGAGATGGAGGATGTC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGAGATTGGTAGGCACTaGACTGTTGAACTGGACCTC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSEIGRH*TVELDL
Trigger: GAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSEVHPS*DREVGL
Trigger: AAGACCCACCTCCCTATCTCATGATGGATGAACTTC...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCATTTTCTCTCTGTTaGGAATCTCCTCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQPFSLC*ESPPST
Trigger: GGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGATGTTATCTCTCTCATaGATCAGCTGCAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQMLSLS*ISCRTC
Trigger: GCAGGTTCTGCAGCTGATTCATGAGAGAGATAACAT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339269.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTCATCCTTCAGCCTATaGTATGCCCGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSSSFSL*YARVFC
Trigger: ACAGAAGACACGGGCATATCATAGGCTGAAGGATGA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTCATCCTTCAGCCTATaGTATGCCCGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAISSFSL*YARVFC
Trigger: ACAGAAGACACGGGCATATCATAGGCTGAAGGATGA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTTATCTCCACCTTCATaGCCTGTTTCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSLSPPS*PVSSVA
Trigger: TGCCACTGAGGAAACAGGTCATGAAGGTGGAGATAA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTTATCTCCACCTTCATaGCCTGTTTCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSLSPPS*PVSSVA
Trigger: TGCCACTGAGGAAACAGGTCATGAAGGTGGAGATAA...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAGACACGTTTTCCACTaGCATAAAGTTGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSRHVFH*HKVASP
Trigger: GGGCGAAGCAACTTTATGTCAGTGGAAAACGTGTCT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTACACACTGTAAAGGGTaGATGGCACTAAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSTHCKG*MALNSP
Trigger: TGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGT...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCACACACTGTAAAGGGTaGATGGCACTAAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAITHCKG*MALNSP
Trigger: TGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAAGGAGAATCACATCTaGCTCTTGGAGGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRKENHI*LLEVTG
Trigger: ACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAAGGAGAATCACATCTaGCTCTTGGAGGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQKENHI*LLEVTG
Trigger: ACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTCAACCTCTCAGCCATaGAGCCTAGAATTCCAATCC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSSTSQP*SLEFQS
Trigger: GGATTGGAATTCTAGGCTGCATGGCTGAGAGGTTGA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGACATCCTCCATCTCTaGATCAGGGAAGATCACCTT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIDILHL*IREDHL
Trigger: AAGGTGATCTTCCCTGATGCAGAGATGGAGGATGTC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGACTTCTTTCAGCCCCTaGTCAGAAAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSETSFSP*SESFFT
Trigger: AGTGAAGAAGCTTTCTGAGCAGGGGCTGAAAGAAGT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346416.7
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQHSSVR*TRLSLC
Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQFKALS*CKRFQM
Trigger: CATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQFKALS*CKRFQM
Trigger: CATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEFKALS*CKRFQM
Trigger: CATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAA...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTCCATTTTCTCTCTGTTaGGAATCTCCTCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSPFSLC*ESPPST
Trigger: GGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGG...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCCATTTTCTCTCTGTTaGGAATCTCCTCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSPFSLC*ESPPST
Trigger: GGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCATTTTCTCTCTGTTaGGAATCTCCTCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIPFSLC*ESPPST
Trigger: GGTTGAAGGAGGAGATTCTCAACAGAGAGAAAATGG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGATGTTATCTCTCTCATaGATCAGCTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEMLSLS*ISCRTS
Trigger: TGAGGTTCTGCAGCTGATTCATGAGAGAGATAACAT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTAAGGAGAATCACATCTaGCTCTTGGAGGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSKENHI*LLEVTG
Trigger: ACCAGTAACCTCCAAGAGGCAGATGTGATTCTCCTT...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCATCAGCTGCAGAACCTaGTCAGAAAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSISCRT*SESFFT
Trigger: AGTGAAGAAGCTTTCTGAGCAGGTTCTGCAGCTGAT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339269.5
CDS-3UTR GCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCACTTCTTTCAGCCCCTaGTCAGAAAGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAITSFSP*SESFFT
Trigger: AGTGAAGAAGCTTTCTGAGCAGGGGCTGAAAGAAGT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346416.7
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIHSSVR*TRLSLC
Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSHSSVR*TRLSLC
Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CCA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGGCTGAGGCTCACACCTaGAATAGATTCTCTAATATG +
Preference number: 4 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQAEAHT*NRFSNM
Trigger: CATATTAGAGAATCTATTCCAGGTGTGAGCCTCAGC...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGGCTGAGGCTCACACCTaGAATAGATTCTCTAATATG +
Preference number: 4 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQAEAHT*NRFSNM
Trigger: CATATTAGAGAATCTATTCCAGGTGTGAGCCTCAGC...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGCTGAGGCTCACACCTaGAATAGATTCTCTAATATG +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRAEAHT*NRFSNM
Trigger: CATATTAGAGAATCTATTCCAGGTGTGAGCCTCAGC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR TCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSFKALS*CKRFQM
Trigger: CATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAA...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTATGTTATCTCTCTCATaGATCAGCTGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSMLSLS*ISCRTS
Trigger: TGAGGTTCTGCAGCTGATTCATGAGAGAGATAACAT...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR TCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCACATAAGCTTCTCTTaGATATACAAAGGCAGACGT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRHISFS*IYKGRR
Trigger: ACGTCTGCCTTTGTATATTCAAGAGAAGCTTATGTG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427097.5
CDS-3UTR GCA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCTGATTGGCTTTTGTTaGTTCTTCTCGGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSELIGFC*FFSEDS
Trigger: ACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCTGATTGGCTTTTGTTaGTTCTTCTCGGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRLIGFC*FFSEDS
Trigger: ACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAG...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CCA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCGCTGAGGCTCACACCTaGAATAGATTCTCTAATATG +
Preference number: 4 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIAEAHT*NRFSNM
Trigger: CATATTAGAGAATCTATTCCAGGTGTGAGCCTCAGC...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTCTGATTGGCTTTTGTTaGTTCTTCTCGGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSLIGFC*FFSEDS
Trigger: ACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAG...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR GCA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCTGATTGGCTTTTGTTaGTTCTTCTCGGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSLIGFC*FFSEDS
Trigger: ACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS GCA 90 bp CCTCCCGCAGCAGCAACAGTGCCCGGGGTCCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCTCACAGGTCCGCCGCTGCGTTCATA +
Preference number: 5 (lower is better)
Translates to: PPAAATVPGVPQRKF*RQVGSPHRSAAAFI
Trigger: TATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488723.1
CDS GCA 90 bp TCTCCCGCAGCAGCAACAGTGCCCGGGGTCCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCTCACAGGTCCGCCGCTGCGTTCATA +
Preference number: 5 (lower is better)
Translates to: SPAAATVPGVPQRKF*RQVGSPHRSAAAFI
Trigger: TATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS GCA 90 bp ACTCCCGCAGCAGCAACAGTGCCCGGGGTCCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCTCACAGGTCCGCCGCTGCGTTCATA +
Preference number: 5 (lower is better)
Translates to: TPAAATVPGVPQRKF*RQVGSPHRSAAAFI
Trigger: TATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAGAGAGAGCAGCACGTaGGCAGCTTGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSERESST*AACWPD
Trigger: GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAGAGAGAGCAGCACGTaGGCAGCTTGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQRESST*AACWPD
Trigger: GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGAGAGAGCAGCACGTaGGCAGCTTGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRESST*AACWPD
Trigger: GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAGAGAGAGCAGCACGTaGGCAGCTTGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQRESST*AACWPD
Trigger: GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGAGAGAGAGCAGCACGTaGGCAGCTTGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRRESST*AACWPD
Trigger: GTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCT...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAGCACGTTGGCAGCTaGCTGGCCCGACTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIQHVGS*LARLSN
Trigger: GTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTG...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCAGCACGTTGGCAGCTaGCTGGCCCGACTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSQHVGS*LARLSN
Trigger: GTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS TCA 90 bp GGACTTCATGTGGAGCCTCTAGAGGAGAAGCCCCCAAAAGGAATCTaGTGGAGGCGACCGGCTGGCAGAGACCACATGGCTCCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLHVEPLEEKPPKGI*WRRPAGRDHMAPVC
Trigger: GCACACAGGAGCCATGTGGTCTCTGCCAGCCGGTCGCCTCCATCAGATTCCTTTTGGGGGCTTCTCCTCTAGAGGCTCCACATGAAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 90 bp AGAGGAACCCGGGAGCGGGGCCGCCTTGTCTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATGGTCTGCTCAGCCTTCTCCCTCCCG +
Preference number: 5 (lower is better)
Translates to: RGTRERGRLVFKALS*CKRFQMVCSAFSLP
Trigger: CGGGAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460043.5
ENST00000471264.5
ENST00000488723.1
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCCTGTTGGGGAGGATaGCCCAAGTCAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSSCWGG*PKSALR
Trigger: CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTCCTGTTGGGGAGGATaGCCCAAGTCAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQSCWGG*PKSALR
Trigger: CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGTCCTGTTGGGGAGGATaGCCCAAGTCAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSESCWGG*PKSALR
Trigger: CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGA...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGTGTCTCCCCTTCCTGTaGGGGAGGATTGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQCLPFL*GRIAQV
Trigger: GACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACA...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGTGTCTCCCCTTCCTGTaGGGGAGGATTGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSECLPFL*GRIAQV
Trigger: GACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACA...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTGTCTCCCCTTCCTGTaGGGGAGGATTGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSCLPFL*GRIAQV
Trigger: GACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS GCA 90 bp CTGCCTCTCTGGACTGGGACACATGGTACTAGAGAGACTGCTGTGTaGCCTGCACATCCTCAGCGACAGCCAAGACACAGAGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LPLWTGTHGTRETAV*PAHPQRQPRHRGQW
Trigger: CCATTGGCCTCTGTGTCTTGGCTGTCGCTGAGGATGTGCAGGGCACACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS GCA 90 bp CCAGCAGCCAGCCTGGAGCTGAAATCCTTCCGAGCTCCATCCTCCTaGCTCTCTGGACTGGGACACATGGTACTAGAGAGACTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: PAASLELKSFRAPSS*LSGLGHMVLERLLC
Trigger: ACACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS GCA 90 bp CTCCAAGCAAGCCTGACCCCCTCCGCATGGCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGTTTACAGATGTTAT +
Preference number: 5 (lower is better)
Translates to: LQASLTPSAWPPTHG*FHSGLAGGSVYRCY
Trigger: ATAACATCTGTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGGCCATGCGGAGGGGGTCAGGCTTGCTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473791.1
CDS CCA 90 bp CAGCCTGGAGCTGAAATCCTTCCGAGCTCCATCCTCCTGCCTCTCTaGACTGGGACACATGGTACTAGAGAGACTGCTGTGTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: QPGAEILPSSILLPL*TGTHGTRETAVCPA
Trigger: TGCAGGGCACACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGCTCCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTCCTGTTGGGGAGGATaGCCCAAGTCAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAISCWGG*PKSALR
Trigger: CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCTGTCTCCCCTTCCTGTaGGGGAGGATTGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAICLPFL*GRIAQV
Trigger: GACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACA...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS TCA 90 bp TTGACACAAAGGCAGACGTGGCACTGGCGCTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGTCCAGAGAGAGCAGCACGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LTQRQTWHWRLSGLA*HQHRSRPERAARWQ
Trigger: CTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS GCA 90 bp GACAGCCAAGACACAGAGGCCAATGGTCCCCACCCCAGAGACCTCTaGACTTGGAGGACACACTGTAAAGGGTGCATGGCACTAAACAGC +
Preference number: 5 (lower is better)
Translates to: DSQDTEANGPHPRDL*TWRTHCKGCMALNS
Trigger: GCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTCTTGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAATCACATCTGCCTCTaGGAGGTTACTGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQNHICL*EVTGPQ
Trigger: CTGCGGACCAGTAACCTCCAAGAGGCAGATGTGATT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAATCACATCTGCCTCTaGGAGGTTACTGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQNHICL*EVTGPQ
Trigger: CTGCGGACCAGTAACCTCCAAGAGGCAGATGTGATT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTGAGCCCAGGGTTATaGACATCCTCCATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQLSPGL*TSSISA
Trigger: TGCAGAGATGGAGGATGTCAATAACCCTGGGCTCAG...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGCTGAGCCCAGGGTTATaGACATCCTCCATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSELSPGL*TSSISA
Trigger: TGCAGAGATGGAGGATGTCAATAACCCTGGGCTCAG...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGGTAGGCACTGCACTGTaGAACTGGACCTCCGAATTG +
Preference number: 5 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRVGTAL*NWTSEL
Trigger: CAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTAC...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTAGGCACTGCACTGTaGAACTGGACCTCCGAATTG +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEVGTAL*NWTSEL
Trigger: CAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTAC...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 90 bp AGAGGAACCCGGGAGCGGGGCCGCCTTGTCTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATGGTCTGCTCAGCCTTCTCCCTGATA +
Preference number: 5 (lower is better)
Translates to: RGTRERGRLVFKALS*CKRFQMVCSAFSLI
Trigger: TATCAGGGAGAAGGCTGAGCAGACCATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCGGGTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAATCACATCTGCCTCTaGGAGGTTACTGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSNHICL*EVTGPQ
Trigger: CTGCGGACCAGTAACCTCCAAGAGGCAGATGTGATT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGCCACATAAGCTTCTCTaGAATATCCCCTCCGCATGG +
Preference number: 5 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQPHKLL*NIPSAW
Trigger: CCATGCGGAGGGGATATTCAAGAGAAGCTTATGTGG...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCCCACATAAGCTTCTCTaGAATATCCCCTCCGCATGG +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSPHKLL*NIPSAW
Trigger: CCATGCGGAGGGGATATTCAAGAGAAGCTTATGTGG...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCTGAGCCCAGGGTTATaGACATCCTCCATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSLSPGL*TSSISA
Trigger: TGCAGAGATGGAGGATGTCAATAACCCTGGGCTCAG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCCACTGACATAAAGTaGCTTCGCCCCTTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSSTDIK*LRPLQL
Trigger: AAGCTGCAAGGGGCGAAGCAACTTTATGTCAGTGGA...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGTCCACTGACATAAAGTaGCTTCGCCCCTTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQSTDIK*LRPLQL
Trigger: AAGCTGCAAGGGGCGAAGCAACTTTATGTCAGTGGA...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGTCCACTGACATAAAGTaGCTTCGCCCCTTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: AGNVSPSCWGGLPKSALRSTDIK*LRPLQL
Trigger: AAGCTGCAAGGGGCGAAGCAACTTTATGTCAGTGGA...CCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAAGCCACGACTGAGATaGGTAGGCACTGCACTGTTG +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSKPRLR*VGTALL
Trigger: CAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAAGCCACGACTGAGATaGGTAGGCACTGCACTGTTG +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIKPRLR*VGTALL
Trigger: CAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 90 bp AATATACAAAGGCAGACGTGGCACTGGCGCTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGTCCAGAGAGAGCAGCACGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: NIQRQTWHWRLSGLA*HQHRSRPERAARWQ
Trigger: CTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427097.5
CDS-3UTR CAA 90 bp AGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTTCCACTGACATAAAGTaGCTTCGCCCCTTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SGRQCLPFLLGRIAQVSSSTDIK*LRPLQL
Trigger: AAGCTGCAAGGGGCGAAGCAACTTTATGTCAGTGGA...AGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCAGGTCTGATTGGCTTTaGTTGCTTCTTCTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LSGRQCLPFLLGRIAQVSRSDWL*LLLLGR
Trigger: TCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCT...GCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAGGTCTGATTGGCTTTaGTTGCTTCTTCTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSERSDWL*LLLLGR
Trigger: TCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAGGTCTGATTGGCTTTaGTTGCTTCTTCTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQRSDWL*LLLLGR
Trigger: TCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000473997.5
CDS GCA 90 bp AAGCTTCTCTTGAATATCCCCTCCGCATGGCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGTTTACAGATGTTAT +
Preference number: 5 (lower is better)
Translates to: KLLLNIPSAWPPTHG*FHSGLAGGSVYRCY
Trigger: ATAACATCTGTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGGCCATGCGGAGGGGATATTCAAGAGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000471264.5
ENST00000473997.5
ENST00000481964.5
ENST00000496381.5
CDS GCA 90 bp CTGGGCTCTGACCCTGAGCCCAGGGTTATTGACATCCTCCATCTCTaGATCAGGGAAGATCACCTTAAGGTTTCCATCATTCCTGCCACA +
Preference number: 5 (lower is better)
Translates to: LGSDPEPRVIDILHL*IREDHLKVSIIPAT
Trigger: TGTGGCAGGAATGATGGAAACCTTAAGGTGATCTTCCCTGATGCAGAGATGGAGGATGTCAATAACCCTGGGCTCAGGGTCAGAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461710.5
ENST00000473997.5
ENST00000481964.5
ENST00000482967.5
ENST00000496381.5
CDS CCA 90 bp GGGTTTCACCATGTTGCCCAGGTGTGTGTTTGTGTGTGTAGAGACTaGGTTTCGCCATGTTGCCCAGGTGTGTGTGTGTGTAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: GFHHVAQVCVCVCRD*VSPCCPGVCVCKDW
Trigger: CCAGTCTTTACACACACACACACCTGGGCAACATGGCGAAACCCAGTCTCTACACACACAAACACACACCTGGGCAACATGGTGAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS-3UTR CAA 90 bp TCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCTCTCAGAACTGGACCTCCGAATaGTCCCGAAAACTATTAACA +
Preference number: 5 (lower is better)
Translates to: SPSCWGGLPKSALRPSSQNWTSE*SRKLLT
Trigger: TGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTT...CTGAGAGGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp CCTCAGTGGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGAACTGGACCTCCGAATaGTCCCGAAAACTATTAACA +
Preference number: 5 (lower is better)
Translates to: PQWQAMSPLPVGEDCPSQNWTSE*SRKLLT
Trigger: TGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTT...CTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 90 bp CTGAGCCCTTCCACTAGCACCAACTGGGTACAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCTTCTCGGAAGATAGTGATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LSPSTSTNWVQPTEV*LAFVASSRKIVMSS
Trigger: GGAACTCATCACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGAAGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461710.5
ENST00000473997.5
ENST00000481964.5
ENST00000482967.5
ENST00000496381.5
CDS CCA 90 bp CCTCTTGGAGGTTACTGGTCCGCAGGTAGCCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGTCATTCACATTCATCTGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PLGGYWSAGSHSSVR*TRLSLCHSHSSGSH
Trigger: ATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTGCGGACCAGTAACCTCCAAGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
ENST00000477105.5
CDS CCA 90 bp TCCAACAGGGAACACTCTCTACTCACTCGAAATCACTCCACCTCCTaGCCTCTCTGCAGCGAGAAACTACATGCCACTGCATACTCCAAA +
Preference number: 5 (lower is better)
Translates to: SNREHSLLTRNHSTS*PLCSEKLHATAYSK
Trigger: TTTGGAGTATGCAGTGGCATGTAGTTTCTCGCTGCAGAGAGGCCAGGAGGTGGAGTGATTTCGAGTGAGTAGAGAGTGTTCCCTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS CCA 90 bp CATGGCTCCTGTGTGCCCCCGATCCTGGCAGGAAGCGAGGTCTCATaGAATGGCAATGGATATAATTTAAGAAGTCAAAGCAGGTCAGTC +
Preference number: 5 (lower is better)
Translates to: HGSCVPPILAGSEVS*NGNGYNLRSQSRSV
Trigger: GACTGACCTGCTTTGACTTCTTAAATTATATCCATTGCCATTCCATGAGACCTCGCTTCCTGCCAGGATCGGGGGCACACAGGAGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAACTGGACCTCCGAATaGTCCCGAAAACTATTAACA +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAINWTSE*SRKLLT
Trigger: TGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp GGCAGGCAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGAAAACGAAGTCCTCCTaGCTTGGTTTTATAGTTGGT +
Preference number: 5 (lower is better)
Translates to: GRQCLPFLLGRIAQVSSEKTKSS*LGFIVG
Trigger: ACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTT...CTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCCCACATAAGCTTCTCTaGAATATACAAAGGCAGACG +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSPHKLL*NIQRQT
Trigger: CGTCTGCCTTTGTATATTCAAGAGAAGCTTATGTGG...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427097.5
CDS GCA 90 bp GAACACTCTCTACTCACTCGAAATCACTCCACCTCCTGGCCTCTCTaGAGCGAGAAACTACATGCCACTGCATACTCCAAACTCACCAAA +
Preference number: 5 (lower is better)
Translates to: EHSLLTRNHSTSWPL*SEKLHATAYSKLTK
Trigger: TTTGGTGAGTTTGGAGTATGCAGTGGCATGTAGTTTCTCGCTGCAGAGAGGCCAGGAGGTGGAGTGATTTCGAGTGAGTAGAGAGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS-3UTR CAA 90 bp AATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCCAAAACGAAGTCCTCCTaGCTTGGTTTTATAGTTGGT +
Preference number: 5 (lower is better)
Translates to: NVSPSCWGGLPKSALRPSKTKSS*LGFIVG
Trigger: ACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTT...GGATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS-3UTR CAA 90 bp CAATGTCTCCCCTTCCTGTTGGGGAGGATTGCCCAAGTCAGCTCTGAGGCCATCAAAACGAAGTCCTCCTaGCTTGGTTTTATAGTTGGT +
Preference number: 5 (lower is better)
Translates to: QCLPFLLGRIAQVSSEAIKTKSS*LGFIVG
Trigger: ACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTT...GATGGCCTCAGAGCTGACTTGGGCAATCCTCCCCAACAGGAAGGGGAGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 90 bp CTGTTGAACTGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTCCCGCAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: LLNWTSELSRKLLTF*PRSVTSFSPSRSSN
Trigger: GTTGCTGCTGCGGGAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496381.5
CDS GCA 90 bp CTTAAAGGAACTTCTGTGGATGCTCTAGGGCATCAGTCTGTGTCCTaGCAGCTTCTGGTTCTGAGGCGAAGCAGATATGAGAACAAGACA +
Preference number: 5 (lower is better)
Translates to: LKGTSVDALGHQSVS*QLLVLRRSRYENKT
Trigger: TGTCTTGTTCTCATATCTGCTTCGCCTCAGAACCAGAAGCTGGCAGGACACAGACTGATGCCCTAGAGCATCCACAGAAGTTCCTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 90 bp TCTCGAGGTAGACTTTTCTCTGCCTTCCAAGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTTCCACTTCTGAAGACAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SRGRLFSAFQEVHPS*DREVGLPLLKTASP
Trigger: AGGAGAAGCTGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCAGAGAAAAGTCTACCTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 90 bp CTGTTGAACTGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTGCTCAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLNWTSELSRKLLTF*PRSVTSFSPCSESF
Trigger: GAAGCTTTCTGAGCAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346416.7
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS TCA 90 bp GAGAAAGAAAGGGAGAGAAAATCCCACAGCCATATAGCTGATCTGTaGGTCCAGGGAAGAGACCCAAGAAACTCGAGCACATGTAAGTTA +
Preference number: 5 (lower is better)
Translates to: EKERERKSHSHIADL*VQGRDPRNSSTCKL
Trigger: TAACTTACATGTGCTCGAGTTTCTTGGGTCTCTTCCCTGGACTCACAGATCAGCTATATGGCTGTGGGATTTTCTCTCCCTTTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS GCA 90 bp GGTTTTATAGTTGGTGGTAAAGCCACGACTGAGATTGGTAGGCACTaGACTGTTGAACTGGACCTCCGAATTGTCCCGAAAACTATTAAC +
Preference number: 5 (lower is better)
Translates to: GFIVGGKATTEIGRH*TVELDLRIVPKTIN
Trigger: GTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTTTACCACCAACTATAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS TCA 90 bp CTGTTGAACTGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTGTAATCCCAACACT +
Preference number: 5 (lower is better)
Translates to: LLNWTSELSRKLLTF*PRSVTSFSPCNPNT
Trigger: AGTGTTGGGATTACAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357886.8
CDS TCA 90 bp TATTTACAGCCAACATTTGGTGAGAAATGTTCTCTCTCCTCCAATTaGGAGCTAAAAGAATGTGACCCCAAAGTTATCTGTGGTCACATG +
Preference number: 5 (lower is better)
Translates to: YLQPTFGEKCSLSSN*ELKECDPKVICGHM
Trigger: CATGTGACCACAGATAACTTTGGGGTCACATTCTTTTAGCTCTCAATTGGAGGAGAGAGAACATTTCTCACCAAATGTTGGCTGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS GCA 72 bp GCAGCAACAGTGCCCGGGGTCCCGCAGCGTAAGTTCTaGCGGCAAGTCGGATCCCCTCACAGGTCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: AATVPGVPQRKF*RQVGSPHRSAA
Trigger: AGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000460043.5
ENST00000473997.5
ENST00000488723.1
CDS GCA 72 bp GTCTGCTCAGCCTTCTCCCTCCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTAAGTTCTGCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: VCSAFSLPQQQQ*PGSRSVSSAGK
Trigger: CTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGGGAGAAGGCTGAGCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460043.5
ENST00000488723.1
CDS GCA 72 bp TCCTCCTGCCTCTCTGGACTCCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTAAGTTCTGCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: SSCLSGLPQQQQ*PGSRSVSSAGK
Trigger: CTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGTCCAGAGAGGCAGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473997.5
CDS CCA 72 bp GTCTCGTCCAGAGAGAGCAGCACGTTGGCAGCTTGCTaGCCCGACTCAGCAACAGCCAGCAGCCGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VSSRESSTLAAC*PDSATASSRGR
Trigger: CCTTCCCCGGCTGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS CCA 72 bp ATGCCCCCTCTCCAAGCAAGCCTGACCCCCTCCGCATaGCCTCCAACACACGGCTGCTTCCACTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: MPPLQASLTPSA*PPTHGCFHSGL
Trigger: CAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGGCCATGCGGAGGGGGTCAGGCTTGCTTGGAGAGGGGGCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473791.1
CDS GCA 72 bp CTGCCGGCAAGTCGGATCCCCTCACAGGTCCGCCGCTaGGTTCATACACAAGCGACTTCCGTTCCGCCGCTA +
Preference number: 6 (lower is better)
Translates to: LPASRIPSQVRR*VHTQATSVPPL
Trigger: TAGCGGCGGAACGGAAGTCGCTTGTGTATGAACGCAGCGGCGGACCTGTGAGGGGATCCGACTTGCCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339269.5
ENST00000357886.8
CDS GCA 72 bp CATAGGTCTCGAGGTAGACTCCCGCAGCAGCAACAGTaGCCGGGGTCCCGCAGCGTAAGTTCTGCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: HRSRGRLPQQQQ*PGSRSVSSAGK
Trigger: CTTGCCGGCAGAACTTACGCTGCGGGACCCCGGGCACTGTTGCTGCTGCGGGAGTCTACCTCGAGACCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477105.5
CDS CAA 72 bp ATAGGTCTCGTCCAGAGAGAGCAGCACGTTGGCAGCTaGCTGGCCCGACTCAGCAACAGCCAGCAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: IGLVQREQHVGS*LARLSNSQQPG
Trigger: CCCCGGCTGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS CAA 90 bp GACATCAGCATAGGTCTCGTCCAGAGAGAGCAGCACGTTGGCAGCTaGCTGGCCCGACTCAGCAACAGCCAGCAGCCGGGGAAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: DISIGLVQREQHVGS*LARLSNSQQPGKVP
Trigger: CGGGACCTTCCCCGGCTGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS GCA 72 bp AGCCTGACCCCCTCCGCATGGCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGTTTAC +
Preference number: 6 (lower is better)
Translates to: SLTPSAWPPTHG*FHSGLAGGSVY
Trigger: GTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGGCCATGCGGAGGGGGTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473791.1
CDS TCA 72 bp GTGGAGCCTCTAGAGGAGAAGCCCCCAAAAGGAATCTaGTGGAGGCGACCGGCTGGCAGAGACCACATGGCT +
Preference number: 6 (lower is better)
Translates to: VEPLEEKPPKGI*WRRPAGRDHMA
Trigger: AGCCATGTGGTCTCTGCCAGCCGGTCGCCTCCATCAGATTCCTTTTGGGGGCTTCTCCTCTAGAGGCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS CCA 72 bp CATCAGCATAGGTCTCGTCCAGAGAGAGCAGCACGTTaGCAGCTTGCTGGCCCGACTCAGCAACAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: HQHRSRPERAAR*QLAGPTQQQPA
Trigger: TGCTGGCTGTTGCTGAGTCGGGCCAGCAAGCTGCCAACGTGCTGCTCTCTCTGGACGAGACCTATGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS TCA 72 bp AGGCAGACGTGGCACTGGCGCTTGTCTGGACTGGCATaGCATCAGCATAGGTCTCGTCCAGAGAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RQTWHWRLSGLA*HQHRSRPERAA
Trigger: TGCTGCTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS GCA 72 bp GACACAGAGGCCAATGGTCCCCACCCCAGAGACCTCTaGACTTGGAGGACACACTGTAAAGGGTGCATGGCA +
Preference number: 6 (lower is better)
Translates to: DTEANGPHPRDL*TWRTHCKGCMA
Trigger: TGCCATGCACCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCTGGGGTGGGGACCATTGGCCTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS TCA 72 bp CGGGAGCGGGGCCGCCTTGTCTTCAAGGCTTTAAGCTaGTGTAAACGGTTCCAGATGGTCTGCTCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: RERGRLVFKALS*CKRFQMVCSAF
Trigger: GAAGGCTGAGCAGACCATCTGGAACCGTTTACATCAGCTTAAAGCCTTGAAGACAAGGCGGCCCCGCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000460043.5
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
CDS GCA 72 bp TTGAATATCCCCTCCGCATGGCCTCCAACACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGTTTAC +
Preference number: 6 (lower is better)
Translates to: LNIPSAWPPTHG*FHSGLAGGSVY
Trigger: GTAAACAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTGTTGGAGGCCATGCGGAGGGGATATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000471264.5
ENST00000473997.5
ENST00000481964.5
ENST00000496381.5
CDS CCA 72 bp CACAAAGGCAGACGTGGCACTGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGTCTCGTCCAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: HKGRRGTGACLD*HDISIGLVQRE
Trigger: CTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS GCA 72 bp AGAGACCTCTGCACTTGGAGGACACACTGTAAAGGGTaGATGGCACTAAACAGCCCACAGTCTCCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: RDLCTWRTHCKG*MALNSPQSPAA
Trigger: TGCTGCGGGAGACTGTGGGCTGTTTAGTGCCATGCACCCTTTACAGTGTGTCCTCCAAGTGCAGAGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS CCA 72 bp GCTGAAATCCTTCCGAGCTCCATCCTCCTGCCTCTCTaGACTGGGACACATGGTACTAGAGAGACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: AEILPSSILLPL*TGTHGTRETAV
Trigger: CACAGCAGTCTCTCTAGTACCATGTGTCCCAGTCCAGAGAGGCAGGAGGATGGAGCTCGGAAGGATTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
CDS CCA 72 bp TACAAAGGCAGACGTGGCACTGGCGCTTGTCTGGACTaGCATGACATCAGCATAGGTCTCGTCCAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: YKGRRGTGACLD*HDISIGLVQRE
Trigger: CTCTCTCTGGACGAGACCTATGCTGATGTCATGCCAGTCCAGACAAGCGCCAGTGCCACGTCTGCCTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427097.5
CDS CCA 72 bp GAACACTCTCTACTCACTCGAAATCACTCCACCTCCTaGCCTCTCTGCAGCGAGAAACTACATGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: EHSLLTRNHSTS*PLCSEKLHATA
Trigger: TGCAGTGGCATGTAGTTTCTCGCTGCAGAGAGGCCAGGAGGTGGAGTGATTTCGAGTGAGTAGAGAGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS GCA 72 bp GTTGGTGGTAAAGCCACGACTGAGATTGGTAGGCACTaGACTGTTGAACTGGACCTCCGAATTGTCCCGAAA +
Preference number: 6 (lower is better)
Translates to: VGGKATTEIGRH*TVELDLRIVPK
Trigger: TTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTTTACCACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS GCA 72 bp CTACTCACTCGAAATCACTCCACCTCCTGGCCTCTCTaGAGCGAGAAACTACATGCCACTGCATACTCCAAA +
Preference number: 6 (lower is better)
Translates to: LLTRNHSTSWPL*SEKLHATAYSK
Trigger: TTTGGAGTATGCAGTGGCATGTAGTTTCTCGCTGCAGAGAGGCCAGGAGGTGGAGTGATTTCGAGTGAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp TCCACTAGCACCAACTGGGTACAGCCCACAGAGGTCTaGTTGGCTTTTGTTGCTTCTTCTCGGAAGATAGTG +
Preference number: 6 (lower is better)
Translates to: STSTNWVQPTEV*LAFVASSRKIV
Trigger: CACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTGTACCCAGTTGGTGCTAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461710.5
ENST00000473997.5
ENST00000481964.5
ENST00000482967.5
ENST00000496381.5
CDS TCA 72 bp AGGGAGAGAAAATCCCACAGCCATATAGCTGATCTGTaGGTCCAGGGAAGAGACCCAAGAAACTCGAGCACA +
Preference number: 6 (lower is better)
Translates to: RERKSHSHIADL*VQGRDPRNSST
Trigger: TGTGCTCGAGTTTCTTGGGTCTCTTCCCTGGACTCACAGATCAGCTATATGGCTGTGGGATTTTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp GCAGAGAACATGTCCCCTAAGTGTCTGAGAACTGGCTaGGGTGATCTGAAAGAAAACCAGGCAGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: AENMSPKCLRTG*GDLKENQAEEG
Trigger: GCCTTCTTCTGCCTGGTTTTCTTTCAGATCACCTCAGCCAGTTCTCAGACACTTAGGGGACATGTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp TGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: WTSELSRKLLTF*PRSVTSFSPSR
Trigger: GCGGGAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496381.5
CDS GCA 72 bp CTGGGTACAGCCCACAGAGGTCTGATTGGCTTTTGTTaGTTCTTCTCGGAAGATAGTGATGAGTTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: LGTAHRGLIGFC*FFSEDSDEFLQ
Trigger: TTGGAGGAACTCATCACTATCTTCCGAGAAGAAGCAACAAAAGCCAATCAGACCTCTGTGGGCTGTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000427097.5
ENST00000461710.5
ENST00000473997.5
ENST00000481964.5
ENST00000482967.5
ENST00000496381.5
CDS CCA 72 bp GGTTACTGGTCCGCAGGTAGCCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGTCATTCACATTCATCT +
Preference number: 6 (lower is better)
Translates to: GYWSAGSHSSVR*TRLSLCHSHSS
Trigger: AGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTGCGGACCAGTAACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
ENST00000477105.5
CDS CCA 72 bp TGTGTGCCCCCGATCCTGGCAGGAAGCGAGGTCTCATaGAATGGCAATGGATATAATTTAAGAAGTCAAAGC +
Preference number: 6 (lower is better)
Translates to: CVPPILAGSEVS*NGNGYNLRSQS
Trigger: GCTTTGACTTCTTAAATTATATCCATTGCCATTCCATGAGACCTCGCTTCCTGCCAGGATCGGGGGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp GAAAGAAAGGGAGAGAAAATCCCACAGCCATATAGCTaGTCTGTGAGTCCAGGGAAGAGACCCAAGAAACTC +
Preference number: 6 (lower is better)
Translates to: ERKGEKIPQPYS*SVSPGKRPKKL
Trigger: GAGTTTCTTGGGTCTCTTCCCTGGACTCACAGATCAGCTATATGGCTGTGGGATTTTCTCTCCCTTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS CCA 72 bp CCACGACTGAGATTGGTAGGCACTGCACTGTTGAACTaGACCTCCGAATTGTCCCGAAAACTATTAACATTC +
Preference number: 6 (lower is better)
Translates to: PRLRLVGTALLN*TSELSRKLLTF
Trigger: GAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS CAA 72 bp GTAAAGCCACGACTGAGATTGGTAGGCACTGCACTGTaGAACTGGACCTCCGAATTGTCCCGAAAACTATTA +
Preference number: 6 (lower is better)
Translates to: VKPRLRLVGTAL*NWTSELSRKLL
Trigger: TAATAGTTTTCGGGACAATTCGGAGGTCCAGTTCAACAGTGCAGTGCCTACCAATCTCAGTCGTGGCTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS CAA 90 bp TACTCTGGAGACCTGATCCAGAAGATGAGCAAAACGAAGTCCTCCTaGCTTGGTTTTATAGTTGGTGGTAAAGCCACGACTGAGATTGGT +
Preference number: 6 (lower is better)
Translates to: YSGDLIQKMSKTKSS*LGFIVGGKATTEIG
Trigger: ACCAATCTCAGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTCTCCAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS TCA 72 bp AGACTTTTCTCTGCCTTCCAAGAAGTTCATCCATCATaGGATAGGGAGGTGGGTCTTCCACTTCTGAAGACA +
Preference number: 6 (lower is better)
Translates to: RLFSAFQEVHPS*DREVGLPLLKT
Trigger: TGTCTTCAGAAGTGGAAGACCCACCTCCCTATCTCATGATGGATGAACTTCTTGGAAGGCAGAGAAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339269.5
ENST00000346416.7
ENST00000357886.8
ENST00000473997.5
CDS TCA 72 bp TGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: WTSELSRKLLTF*PRSVTSFSPCS
Trigger: TGAGCAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346416.7
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000498525.5
CDS CAA 72 bp GACCTGATCCAGAAGATGAGCAAAACGAAGTCCTCCTaGCTTGGTTTTATAGTTGGTGGTAAAGCCACGACT +
Preference number: 6 (lower is better)
Translates to: DLIQKMSKTKSS*LGFIVGGKATT
Trigger: AGTCGTGGCTTTACCACCAACTATAAAACCAAGCAAGGAGGACTTCGTTTTGCTCATCTTCTGGATCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346416.7
ENST00000357886.8
ENST00000461356.5
ENST00000471264.5
ENST00000473997.5
ENST00000477105.5
ENST00000488723.1
ENST00000496381.5
ENST00000498525.5
CDS CAA 90 bp TGTAAGTTAAAGAGGCCTGAGCCGTCAGAGATCACAAAGAAAATGTaGATCTCCAACAGGGAACACTCTCTACTCACTCGAAATCACTCC +
Preference number: 6 (lower is better)
Translates to: CKLKRPEPSEITKKM*ISNREHSLLTRNHS
Trigger: GGAGTGATTTCGAGTGAGTAGAGAGTGTTCCCTGTTGGAGATCAACATTTTCTTTGTGATCTCTGACGGCTCAGGCCTCTTTAACTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp TGGACCTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTCAGCCCCTGTAAT +
Preference number: 6 (lower is better)
Translates to: WTSELSRKLLTF*PRSVTSFSPCN
Trigger: ATTACAGGGGCTGAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357886.8
CDS GCA 72 bp TTACCACAAATATCCAAACCAACACTCATTTCACAGTaGAAGCCAAAAGCCCAAAAGGACTCCTCACCTTCA +
Preference number: 6 (lower is better)
Translates to: LPQISKPTLISQ*KPKAQKDSSPS
Trigger: TGAAGGTGAGGAGTCCTTTTGGGCTTTTGGCTTGCACTGTGAAATGAGTGTTGGTTTGGATATTTGTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461710.5
CDS TCA 72 bp ATGTTCTCTCTCCTCCAATTGAGAGCTAAAAGAATGTaGCCCCAAAGTTATCTGTGGTCACATGTCTTATCA +
Preference number: 6 (lower is better)
Translates to: MFSLLQLRAKRM*PQSYLWSHVLS
Trigger: TGATAAGACATGTGACCACAGATAACTTTGGGGTCACATTCTTTTAGCTCTCAATTGGAGGAGAGAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461710.5