RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK5R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176749

Ensembl transcript IDs: ENST00000313401.4, ENST00000584716.1, ENST00000584792.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACCAGGGGCCTCCCACCTCTGGTCGCACGCGGCAGCAGGATCTaGAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTGCTGTGT +
Preference number: 1 (lower is better)
Translates to: ATRGLPPLVARGSRI*RQAVWKPSREEVLC
Trigger: ACACAGCACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTGGGAGGCCCCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp GGCACTGACCCTCCCTCTTCCATGCCACCAGGGGCCTCCCACCTCTaGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAAC +
Preference number: 1 (lower is better)
Translates to: GTDPPSSMPPGASHL*SHAAAGSEDRLCGN
Trigger: GTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTGGGAGGCCCCTGGTGGCATGGAAGAGGGAGGGTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp ACCGATTATCTGACAGTCCCAGGAACGGCTCTGCTGGGCCTCAGGTaGAGCAAGGCAGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: TDYLTVPGTALLGLR*SKADVLRPGRLSSP
Trigger: TGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCTGCCTTGCTGCACCTGAGGCCCAGCAGAGCCGTTCCTGGGACTGTCAGATAATCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp TGCTGTGTGAAGTCTGTGCCAGCAGCCGCAGGCTCCTTCCACCGCTaGACCGATTATCTGACAGTCCCAGGAACGGCTCTGCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: CCVKSVPAAAGSFHR*TDYLTVPGTALLGL
Trigger: GAGGCCCAGCAGAGCCGTTCCTGGGACTGTCAGATAATCGGTGCAGCGGTGGAAGGAGCCTGCGGCTGCTGGCACAGACTTCACACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp GCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTaGTGTGTGAAGTCTGTGCCAGCAGCCGCAGGCTCCTTCCACCGC +
Preference number: 1 (lower is better)
Translates to: AGSEDRLCGNPAERR*CVKSVPAAAGSFHR
Trigger: GCGGTGGAAGGAGCCTGCGGCTGCTGGCACAGACTTCACACAGCACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp GCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATaGGCCCTCCTCCTGAGACTTGGCACTGACCCTCCCTCTTCCATG +
Preference number: 1 (lower is better)
Translates to: AQFAARFRQLRVIHT*ALLLRLGTDPPSSM
Trigger: CATGGAAGAGGGAGGGTCAGTGCCAAGTCTCAGGAGGAGGGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp TGGCGGGGATCTTGCCTCACGACCCCACTGGCAGCTCAGTTAGGGTaGCTGGCTCCAGGAGCCTCTGGGAGAGTGAATAACTCCACACAG +
Preference number: 1 (lower is better)
Translates to: WRGSCLTTPLAAQLG*LAPGASGRVNNSTQ
Trigger: CTGTGTGGAGTTATTCACTCTCCCAGAGGCTCCTGGAGCCAGCCACCCTAACTGAGCTGCCAGTGGGGTCGTGAGGCAAGATCCCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp CATGTGCACCAGCAAGAGGCCTTAGCCCTTAGGTGGGCACCGGCTTaGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCG +
Preference number: 1 (lower is better)
Translates to: HVHQQEALALRWAPA*SQGMASLTLPRRQA
Trigger: CGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGCCTCTTGCTGGTGCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR GCA 90 bp CAGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATaGCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAATTGGGAC +
Preference number: 1 (lower is better)
Translates to: QMFSGRAGSLPHLWE*LQPPGSASGLLNWD
Trigger: GTCCCAATTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp GGGCACAGGCGGCAGGGGCAGGTCAGTCCTTTGAGTTCCCCAAAGTaGGAGGTCAGTGGCCTGGGTGGCTCTGAATACATCTTCTGGGTT +
Preference number: 1 (lower is better)
Translates to: GHRRQGQVSPLSSPK*EVSGLGGSEYIFWV
Trigger: AACCCAGAAGATGTATTCAGAGCCACCCAGGCCACTGACCTCCCACTTTGGGGAACTCAAAGGACTGACCTGCCCCTGCCGCCTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp GCAAGGCAGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTaGGAATGCCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAAT +
Preference number: 1 (lower is better)
Translates to: ARQMFSGRAGSLPHL*ECLQPPGSASGLLN
Trigger: ATTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp CAGGACAAATGTCATGTGCACCAGCAAGAGGCCTTAGCCCTTAGGTaGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCC +
Preference number: 1 (lower is better)
Translates to: QDKCHVHQQEALALR*APAWSQGMASLTLP
Trigger: GGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGCCTCTTGCTGGTGCACATGACATTTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR GCA 90 bp GCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTaGAGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTAT +
Preference number: 1 (lower is better)
Translates to: ASLTLPRRQALLMGT*SCPGICHRVTALHY
Trigger: ATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR GCA 90 bp GGGAGGTCAGTGGCCTGGGTGGCTCTGAATACATCTTCTGGGTTTTaGGCAAGGCTCGTGAGTTCAAAAGTGCCCAGAGTTCTTGGCAGG +
Preference number: 1 (lower is better)
Translates to: GRSVAWVALNTSSGF*ARLVSSKVPRVLGR
Trigger: CCTGCCAAGAACTCTGGGCACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCACCCAGGCCACTGACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 90 bp TGTCTTCACATTGGTCTTTGTTCTCCACAGCCGAGTGATGGGCCATaGAGGAAGGCTTGCTCCCTCTCCCAAGTCCCAAGCCACCAATGC +
Preference number: 1 (lower is better)
Translates to: CLHIGLCSPQPSDGP*RKACSLSQVPSHQC
Trigger: GCATTGGTGGCTTGGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCACTCGGCTGTGGAGAACAAAGACCAATGTGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR TCA 90 bp TCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCGAGTaGTGGGCCATGGAGGAAGGCTTGCTCCCTCTCCCAAGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: SSVVSSHWSLFSTAE*WAMEEGLLPLPSPK
Trigger: CTTGGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCACTCGGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp GAAGGAAACAGACACGCAACTGGAATCCTGTGGATGCAACGTAACTaGACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACAC +
Preference number: 1 (lower is better)
Translates to: EGNRHATGILWMQRN*TVRSQVPPAEGDTH
Trigger: GTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGTTACGTTGCATCCACAGGATTCCAGTTGCGTGTCTGTTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR TCA 90 bp TGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: CPPGRSRSSGRRRPV*SSVGRHLSAASLSS
Trigger: TGAGCTCAAAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
3UTR CCA 90 bp CTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTCCTaGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: LAQKAGVANGHLQLS*HLPQGDCTTLFKRK
Trigger: TTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR CCA 90 bp CTCACTCCCCGTCTTGTAATTGTCTCCAAGATCCGGCTGTCTCACTaGTCCTTGCTGGGCAAGGCTTCCTCTTTAGAAGAAACTCAACTG +
Preference number: 1 (lower is better)
Translates to: LTPRLVIVSKIRLSH*SLLGKASSLEETQL
Trigger: CAGTTGAGTTTCTTCTAAAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGATCTTGGAGACAATTACAAGACGGGGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp GCTAATGGGCACCTGCAGCTGTCCTGGCATTTGCCACAGGGTGACTaGACTACATTATTCAAAAGAAAAACTCACCCAGGAAAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: ANGHLQLSWHLPQGD*TTLFKRKTHPGKLS
Trigger: GGACAGCTTTCCTGGGTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR GCA 90 bp AGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTTaGCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACC +
Preference number: 1 (lower is better)
Translates to: RRQALLMGTCSCPGI*HRVTALHYSKEKLT
Trigger: GGTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR GCA 90 bp CACTCAAGTATATCAGTTGTTCCTTTACACAATACTGATGACCAGTaGAAGGGGAGAGAACACGACAGGCTTCACACTGAGGGAACTAGA +
Preference number: 1 (lower is better)
Translates to: HSSISVVPLHNTDDQ*KGREHDRLHTEGTR
Trigger: TCTAGTTCCCTCAGTGTGAAGCCTGTCGTGTTCTCTCCCCTTGCACTGGTCATCAGTATTGTGTAAAGGAACAACTGATATACTTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 90 bp AGAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTaGATGGGTGTAATTTTCACAGCCATCTGTTCTAAGATTATTTTT +
Preference number: 1 (lower is better)
Translates to: REKPNPELLFLWLVL*MGVIFTAICSKIIF
Trigger: AAAAATAATCTTAGAACAGATGGCTGTGAAAATTACACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp AGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACTCCCCAGTGGACTaGGCCTGGAAGACAGAATCC +
Preference number: 2 (lower is better)
Translates to: RCSPAGQALFPTSGNASSHSPVD*AWKTES
Trigger: GGATTCTGTCTTCCAGGCCCAGTCCACTGGGGAGTG...GCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp GCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTaGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGT +
Preference number: 2 (lower is better)
Translates to: AGYSAHRSRPRRSRF*SSWPLSFFRSEKTC
Trigger: ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
3UTR-3UTR TCA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGAGACTGTGGGAAAGGTaGGGCCCTTGGTGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGRLWER*GPWWLC
Trigger: GCAAAGCCACCAAGGGCCTCACCTTTCCCACAGTCT...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp TCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAAGGGTGGCGGGGATCTTaGCTCACGACCCCACTGGCA +
Preference number: 2 (lower is better)
Translates to: SPPLGMPPATRFCLRTLKGWRGS*LTTPLA
Trigger: TGCCAGTGGGGTCGTGAGGCAAGATCCCCGCCACCC...TTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp AGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCTTGAGTTCCCCAAAGTaGGAGGTCAGTGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RCSPAGQALFPTSGNASSLSSPK*EVSGLG
Trigger: ACCCAGGCCACTGACCTCCCACTTTGGGGAACTCAA...GCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp AGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGGCAGCTCAGTTAGGGTaGCTGGCTCCAGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: RWAPAWSQGMASLTLPRRAAQLG*LAPGAS
Trigger: AGAGGCTCCTGGAGCCAGCCACCCTAACTGAGCTGC...CCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp CTTAGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTaGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LRWAPAWSQGMASLT*PRRQALLMGTCSCP
Trigger: AGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR-3UTR CCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAAGGTGGGCACCGGCTTaGTCTCAAGGTATGGCATCC +
Preference number: 2 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPRWAPA*SQGMAS
Trigger: GGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp GCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTCGCTTCTTGTCCTCCTaGCCGCTCTCGTTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: ASLTLPRRQALLMGTCSCRFLSS*PLSFFR
Trigger: CCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCG...ACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584716.1
3UTR CAA 90 bp TGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTaGCTAATGGGCACCTGCAGCTGTCCTGGCATTTGCCACAGGGTG +
Preference number: 2 (lower is better)
Translates to: WSQGMASLTLPRRQA*LMGTCSCPGICHRV
Trigger: CACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR-3UTR TCA 90 bp CACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTGAGCCTCTGGGAGAGTaGATAACTCCACACAGGAGC +
Preference number: 2 (lower is better)
Translates to: HRLGLKVWHPSPCPEGRREPLGE*ITPHRS
Trigger: GCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTC...ACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp TCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTCCCAAGCCACCAATaGGGGAGAATTAGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: SPAGQALFPTSGNASSHQVPSHQ*GRIRKK
Trigger: TTTCTTTCTAATTCTCCCGCATTGGTGGCTTGGGAC...CTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp GTGATGGGCCATGGAGGAAGGCTTGCTCCCTCTCCCAAGTCCCAAGCCACCAATATCCGGCTGTCTCACTaGTCCTTGCTGGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: VMGHGGRLAPSPKSQATNIRLSH*SLLGKA
Trigger: AGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGAT...ATTGGTGGCTTGGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp AAAGAAAAGCCCTTCTCCCGATCCAGGCCTAGGAGGAGCCGCTTCTaGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGT +
Preference number: 2 (lower is better)
Translates to: KEKPFSRSRPRRSRF*SSWPLSFFRSEKTC
Trigger: ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGGAGAAGGGCTTTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584716.1
3UTR-3UTR CCA 90 bp CCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCGTAGTGTCTTCACATTaGTCTTTGTTCTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: PGRLSSPPLGMPPATRFCVVSSH*SLFSTA
Trigger: GGCTGTGGAGAACAAAGACCAATGTGAAGACACTAC...GCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp AGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGCAGGTCAGTCCTTTaGGTTCCCCAAAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SQTSSSANTTNVAGSSRQGRSVL*VPQSGR
Trigger: CCTCCCACTTTGGGGAACTCAAAGGACTGACCTGCC...TTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCGCCAGTAGGGTAAGGTaGAAACCAAAACCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: TAQFAARFRQLRVIHTCAASRVR*KPKPAA
Trigger: AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGC...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAAATGCATTGAATCCTTaGGCCATGACGCAGGCTACA +
Preference number: 2 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPNALNP*AMTQAT
Trigger: TGTAGCCTGCGTCATGGCTCAAGGATTCAATGCATT...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAACATCTTCTGGGTTTTaGGCAAGGCTCGTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPTSSGF*ARLVSS
Trigger: TGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGT...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp ACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTCCAGCCACCAGGTTCTaGCTCAGGACTCTTAAATTG +
Preference number: 2 (lower is better)
Translates to: TRQQDLKTGCVETQQRGGPATRF*LRTLKL
Trigger: CAATTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGG...ACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp CAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCTCCTGGGTCGGCATTTATCTaGAGCATCTTTGAGCTCATG +
Preference number: 2 (lower is better)
Translates to: QATVLTDPGLGGAASCPPGSAFI*SIFELM
Trigger: CATGAGCTCAAAGATGCTGCAGATAAATGCCGACCC...AGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
3UTR-3UTR CCA 90 bp TCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAACCAGTGGACTGGGCCTaGAAGACAGAATCCTCTGTA +
Preference number: 2 (lower is better)
Translates to: SPPLGMPPATRFCLRTLKPVDWA*KTESSV
Trigger: TACAGAGGATTCTGTCTTCCAGGCCCAGTCCACTGG...TTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp TGGGAGGTCAGTGGCCTGGGTGGCTCTGAATACATCTTCTGGGTTTaGCGCAAGGCTCGTGAGTTCAAAAGTGCCCAGAGTTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: WEVSGLGGSEYIFWV*RKAREFKSAQSSWQ
Trigger: CTGCCAAGAACTCTGGGCACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCACCCAGGCCACTGACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp GTTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGAATGCATTGAATCCTTaGGCCATGACGCAGGCTACA +
Preference number: 2 (lower is better)
Translates to: VDDREATVPKGLLAALHQNALNP*AMTQAT
Trigger: TGTAGCCTGCGTCATGGCTCAAGGATTCAATGCATT...CTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584792.5
3UTR-3UTR CCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACACCCCAATTCCTCCCTaGGCCAGGCAGCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHTPIPP*ARQPEA
Trigger: GGCCTCTGGCTGCCTGGCCCAGGGAGGAATTGGGGT...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp GAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTGCATGGGTGGAAGATGTCCCCGGGTaGCGGGGATCTTGCCTCACG +
Preference number: 2 (lower is better)
Translates to: EKNQILNYYSCGLFCAWVEDVPG*RGSCLT
Trigger: CGTGAGGCAAGATCCCCGCCACCCGGGGACATCTTC...CACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCATTAACGGGTGGGGGTaGGGTCACCACATCGCCTTC +
Preference number: 2 (lower is better)
Translates to: WKTESSVVSSHWSLFSTAINGWG*GHHIAF
Trigger: GAAGGCGATGTGGTGACCCCACCCCCACCCGTTAAT...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp CAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTaGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCAC +
Preference number: 2 (lower is better)
Translates to: QKAGVANGHLQLSWH*PQGDCTTLFKRKTH
Trigger: GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR-3UTR TCA 90 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTTTCTCCACAGCCGAGTaGTGGGCCATGGAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: KVVFIAAWQMGSLLAHSSFSTAE*WAMEEG
Trigger: GCCTTCCTCCATGGCCCATCACTCGGCTGTGGAGAA...ACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp GAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTGCATGGGTGCCGAGTGATGGGCCATaGAGGAAGGCTTGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: EKNQILNYYSCGLFCAWVPSDGP*RKACSL
Trigger: GAGGGAGCAAGCCTTCCTCCATGGCCCATCACTCGG...CACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp CCCCGTCTTGTAATTGTCTCCAAGATCCGGCTGTCTCACTGGTCCTaGCTGGGCAAGGCTTCCTCTTTAGAAGAAACTCAACTGTTTAGA +
Preference number: 2 (lower is better)
Translates to: PRLVIVSKIRLSHWS*LGKASSLEETQLFR
Trigger: TCTAAACAGTTGAGTTTCTTCTAAAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGATCTTGGAGACAATTACAAGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp AAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGCGCGGCAGCAGGATCTaGAGACAGGCTGTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: KSSLHSSMANGFFACTLKRGSRI*RQAVWK
Trigger: TTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCG...CTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp GGACCCAAATTGAGAGAAATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCAT +
Preference number: 2 (lower is better)
Translates to: GPKLREINESNQLIGQYHRRRPV*SSVGRH
Trigger: ATGCCGACCCACACTACTTCACACAGGTCTTCTCCG...GTGGTATTGGCCGATGAGCTGGTTTGACTCATTAATTTCTCTCAATTTGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584716.1
3UTR-3UTR GCA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCTGTCTCACTGGTCCTTaGTGGGCAAGGCTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: WKTESSVVSSHWSLFSTACLTGP*WARLPL
Trigger: AAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACA...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR GCA 90 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTCTGCTGGGCCTCAGGTaGAGCAAGGCAGATGTTCTC +
Preference number: 2 (lower is better)
Translates to: KVVFIAAWQMGSLLAHSSLLGLR*SKADVL
Trigger: GAGAACATCTGCCTTGCTGCACCTGAGGCCCAGCAG...ACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCCTTGGTCTCAAGGTATaGCATCCCTCACCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: WKTESSVVSSHWSLFSTALGLKV*HPSPCP
Trigger: TGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAG...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACGGGAGGTCAGTGGCCTaGGTGGCTCTGAATACATCT +
Preference number: 2 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHGRSVA*VALNTS
Trigger: AGATGTATTCAGAGCCACCCAGGCCACTGACCTCCC...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp CAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTaGTTCCTTTACACAATACTGATGACCAGTGCAAGGGGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: QHGKWVLCLHTQVYQ*FLYTILMTSARGEN
Trigger: GTTCTCTCCCCTTGCACTGGTCATCAGTATTGTGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAAGCCTTAGCCCTTAGGTaGGCACCGGCTTGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKALALR*APAWSQ
Trigger: TTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGC...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CCA 90 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTTCTGAATACATCTTCTaGGTTTTGCGCAAGGCTCGT +
Preference number: 2 (lower is better)
Translates to: KVVFIAAWQMGSLLAHSSSEYIF*VLRKAR
Trigger: ACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGA...ACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAATTTGCGCAAGGCTCGTaGGTTCAAAAGTGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKFAQGS*VQKCPE
Trigger: CTCTGGGCACTTTTGAACTCACGAGCCTTGCGCAAA...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp GAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTGCATGGGTGAGCTGGGACCCAAATTaGGAGAAATTAATGAGTCAA +
Preference number: 2 (lower is better)
Translates to: EKNQILNYYSCGLFCAWVSWDPN*EKLMSQ
Trigger: TTGACTCATTAATTTCTCTCAATTTGGGTCCCAGCT...CACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR TCA 90 bp ATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACAACCAGCAGCTGCAAATaGTCAGTTGTAGAAATCAGC +
Preference number: 2 (lower is better)
Translates to: MANGFFACTLKYISCSFTTSSCK*SVVEIS
Trigger: GCTGATTTCTACAACTGATCATTTGCAGCTGCTGGT...TGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 90 bp GTTGATCTAAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTaGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACACAATACT +
Preference number: 2 (lower is better)
Translates to: VDLKVVFIAAWQMGS*LAHSSISVVPLHNT
Trigger: AGTATTGTGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTTAGATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 72 bp CCTCCCTCTTCCATGCCACCAGGGGCCTCCCACCTCTaGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: PPSSMPPGASHL*SHAAAGSEDRL
Trigger: CAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTGGGAGGCCCCTGGTGGCATGGAAGAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCCGGGTGGCGGGGATCTaGCCTCACGACCCCACTGGC +
Preference number: 3 (lower is better)
Translates to: TAQFAARFRQLRVIHTCARVAGI*PHDPTG
Trigger: GCCAGTGGGGTCGTGAGGCAAGATCCCCGCCACCCG...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGAGGAGGAGCCGCTTCTaGTCCTCCTGGCCGCTCTCG +
Preference number: 3 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGRRSRF*SSWPLS
Trigger: CGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCT...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584716.1
3UTR TCA 72 bp GGCCTCCCACCTCTGGTCGCACGCGGCAGCAGGATCTaGAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAG +
Preference number: 3 (lower is better)
Translates to: GLPPLVARGSRI*RQAVWKPSREE
Trigger: CTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTGGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp TCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATaGCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTA +
Preference number: 3 (lower is better)
Translates to: SGRAGSLPHLWE*LQPPGSASGLL
Trigger: TAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp GCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATaGGCCCTCCTCCTGAGACTTGGCACTGACCCTCCC +
Preference number: 3 (lower is better)
Translates to: AARFRQLRVIHT*ALLLRLGTDPP
Trigger: GGGAGGGTCAGTGCCAAGTCTCAGGAGGAGGGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGTCCCAAAAGGCCTCCTaGCAGCTCTCCACCAGGAAG +
Preference number: 3 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGSQKAS*QLSTRK
Trigger: CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGA...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000584716.1
3UTR GCA 72 bp GAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTaGTGTGTGAAGTCTGTGCCAGCAGCCGCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: EDRLCGNPAERR*CVKSVPAAAGS
Trigger: GGAGCCTGCGGCTGCTGGCACAGACTTCACACAGCACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 72 bp CGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCTCCTaGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGT +
Preference number: 3 (lower is better)
Translates to: RSRPRRSRFLSS*PLSFFRSEKTC
Trigger: ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
3UTR-3UTR CAA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCACAGCTGTCCTGGCATTaGCCACAGGGTGACTGCACT +
Preference number: 3 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPQLSWH*PQGDCT
Trigger: AGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTG...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 72 bp TGTCATGTGCACCAGCAAGAGGCCTTAGCCCTTAGGTaGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTC +
Preference number: 3 (lower is better)
Translates to: CHVHQQEALALR*APAWSQGMASL
Trigger: GAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGCCTCTTGCTGGTGCACATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR-3UTR CAA 90 bp GGCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTTGCCACAGGGTGACTGCAGGCCCTTGGTGGCTTaGCTAGACACATACTGTACA +
Preference number: 3 (lower is better)
Translates to: GVANGHLQLSWHLPQGDCRPLVA*LDTYCT
Trigger: TGTACAGTATGTGTCTAGCAAAGCCACCAAGGGCCT...GCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp AGACACGCAACTGGAATCCTGTGGATGCAACGTAACTaGACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGT +
Preference number: 3 (lower is better)
Translates to: RHATGILWMQRN*TVRSQVPPAEG
Trigger: ACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGTTACGTTGCATCCACAGGATTCCAGTTGCGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp AGGAGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCAAATGCATTGAATCCTaGAGCCATGACGCAGGCTAC +
Preference number: 3 (lower is better)
Translates to: RSRFLSSWPLSFFRSEKTKCIES*SHDAGY
Trigger: GTAGCCTGCGTCATGGCTCAAGGATTCAATGCATTT...GGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
3UTR TCA 72 bp GTGTCTTCACATTGGTCTTTGTTCTCCACAGCCGAGTaGTGGGCCATGGAGGAAGGCTTGCTCCCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: VSSHWSLFSTAE*WAMEEGLLPLP
Trigger: TGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCACTCGGCTGTGGAGAACAAAGACCAATGTGAAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 72 bp AGGTCCCCATTCCAGCACTCCCCAGTGGACTGGGCCTaGAAGACAGAATCCTCTGTAGTGTCTTCACATTGG +
Preference number: 3 (lower is better)
Translates to: RSPFQHSPVDWA*KTESSVVSSHW
Trigger: CCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGCCCAGTCCACTGGGGAGTGCTGGAATGGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR TCA 72 bp GGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCATTTATCTGCAGCATCT +
Preference number: 3 (lower is better)
Translates to: GRSRSSGRRRPV*SSVGRHLSAAS
Trigger: AGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
3UTR CCA 72 bp GAGGTCAGTGGCCTGGGTGGCTCTGAATACATCTTCTaGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: EVSGLGGSEYIF*VLRKAREFKSA
Trigger: GGCACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCACCCAGGCCACTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp GGAGCCTCTGGGAGAGTGAATAACTCCACACAGGAGCCAGAAAAGGGCCTCCAAAAATGCATTGAATCCTaGAGCCATGACGCAGGCTAC +
Preference number: 3 (lower is better)
Translates to: GASGRVNNSTQEPEKGLQKCIES*SHDAGY
Trigger: GTAGCCTGCGTCATGGCTCAAGGATTCAATGCATTT...TTGGAGGCCCTTTTCTGGCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp AAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGCCCAGAAGGCAGGCGTaGCTAATGGGCACCTGCAGC +
Preference number: 3 (lower is better)
Translates to: KSSLHSSMANGFFACTLKPRRQA*LMGTCS
Trigger: GCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGG...CTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTATGGCATCCCTCACCTaGCCCAGAAGGCAGGCGTTG +
Preference number: 3 (lower is better)
Translates to: HICVFTASRVRWKPKPAAMASLT*PRRQAL
Trigger: CAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCAT...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp GCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTTaGCACAGGGTGACTGCACTACATTATTCAAAAGAA +
Preference number: 3 (lower is better)
Translates to: ALLMGTCSCPGI*HRVTALHYSKE
Trigger: TTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR CCA 72 bp CGTCTTGTAATTGTCTCCAAGATCCGGCTGTCTCACTaGTCCTTGCTGGGCAAGGCTTCCTCTTTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: RLVIVSKIRLSH*SLLGKASSLEE
Trigger: TTCTTCTAAAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGATCTTGGAGACAATTACAAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR-3UTR CAA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCTACATCTTCTGGGTTTaGCGCAAGGCTCGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: WKTESSVVSSHWSLFSTAYIFWV*RKAREF
Trigger: GAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTA...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp ATATCAGTTGTTCCTTTACACAATACTGATGACCAGTaGAAGGGGAGAGAACACGACAGGCTTCACACTGAG +
Preference number: 3 (lower is better)
Translates to: ISVVPLHNTDDQ*KGREHDRLHTE
Trigger: CTCAGTGTGAAGCCTGTCGTGTTCTCTCCCCTTGCACTGGTCATCAGTATTGTGTAAAGGAACAACTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CCA 72 bp GTACACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTaGAAACCAAAACCAGCAGCTGCAAATGATCAGTTG +
Preference number: 3 (lower is better)
Translates to: VHICVFTASRVR*KPKPAAANDQL
Trigger: CAACTGATCATTTGCAGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp CCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTaGATGGGTGTAATTTTCACAGCCATCTGTTCTAAG +
Preference number: 3 (lower is better)
Translates to: PNPELLFLWLVL*MGVIFTAICSK
Trigger: CTTAGAACAGATGGCTGTGAAAATTACACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR GCA 72 bp AGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTaGACACTCAAGTATATCAGTTGTTCCTTTACACAA +
Preference number: 3 (lower is better)
Translates to: SLHSSMANGFFA*TLKYISCSFTQ
Trigger: TTGTGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp TCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGCCCCACCTCTGGGAATaGCTCCAGCCACCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SPAGQALFPTSGNASSHQPHLWE*LQPPGS
Trigger: AGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGG...CTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCTGGGCCGGTGGGGGCTaGGCGAATGTGGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: RCSPAGQALFPTSGNASSWAGGG*ANVDRL
Trigger: CAACCTGTCCACATTCGCCCAGCCCCCACCGGCCCA...GCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GGCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTTGCCACAGGGTGACTGCAACCCGAGAGCTGGCTaGCCGGGGGTGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GVANGHLQLSWHLPQGDCNPRAG*PGVQAA
Trigger: AGCCGCCTGCACCCCCGGCCAGCCAGCTCTCGGGTT...GCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp CAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGGGCTAACCCGAGAGCTGGCTaGCCGGGGGTGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QRGNGPKRPPCSSPPGRANPRAG*PGVQAA
Trigger: AGCCGCCTGCACCCCCGGCCAGCCAGCTCTCGGGTT...AGCCCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp AGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCACCCCAATTCCTCCCTaGGCCAGGCAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RCSPAGQALFPTSGNASSTPIPP*ARQPEA
Trigger: GGCCTCTGGCTGCCTGGCCCAGGGAGGAATTGGGGT...GCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AGGAGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCACGGCCTGGAGCTCGTaGTCCGAGCCCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RSRFLSSWPLSFFRSEKTTAWSS*SEPTSE
Trigger: CTCCGAGGTGGGCTCGGATCACGAGCTCCAGGCCGT...GGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp CACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTCCGTTTGGGCGTCCCTaGGGAGGTGACGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HRLGLKVWHPSPCPEGRRPFGRP*GGDGRV
Trigger: CACCCTGCCGTCACCTCCGCAGGGACGCCCAAACGG...ACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp GACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCTGGGCCGGTGGGGGCTaGGCGAATGTGGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: DAGYSAHRSRPRRSRFLSWAGGG*ANVDRL
Trigger: CAACCTGTCCACATTCGCCCAGCCCCCACCGGCCCA...GGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR CCA 90 bp CACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTGAGGAGCCCCCGGTCTaGGAACCCGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HRLGLKVWHPSPCPEGRREEPPV*EPESWL
Trigger: CAGCCAGCTCTCGGGTTCCCAGACCGGGGGCTCCTC...ACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
3UTR CAA 72 bp CAGCAAGGGCACAGGCGGCAGGGGCAGGTCAGTCCTTaGAGTTCCCCAAAGTGGGAGGTCAGTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QQGHRRQGQVSP*SSPKWEVSGLG
Trigger: ACCCAGGCCACTGACCTCCCACTTTGGGGAACTCAAAGGACTGACCTGCCCCTGCCGCCTGTGCCCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp GTTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGCGTCCCTGCGGAGGTaGCGGCAGGGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VDDREATVPKGLLAALHQASLRR*RQGEGL
Trigger: AAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGC...CTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp GCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTGGGTGGCGGGGATCTTaGCTCACGACCCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ASLTLPRRQALLMGTCSCGWRGS*LTTPLA
Trigger: TGCCAGTGGGGTCGTGAGGCAAGATCCCCGCCACCC...ACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGAGGAGCCCCCGGTCTaGGAACCCGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRFLSSWPLSFFRSEKTCEEPPV*EPESWL
Trigger: CAGCCAGCTCTCGGGTTCCCAGACCGGGGGCTCCTC...ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp AGATGTTCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCTCACTGGTGGACGCCTaGACGATGACCCGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RCSPAGQALFPTSGNASSSLVDA*TMTRLG
Trigger: GCCCAAACGGGTCATCGTCCAGGCGTCCACCAGTGA...GCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGAACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AGGAGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCAGGGGCTTTCTTGACTaGGGAGGAGCCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RSRFLSSWPLSFFRSEKTRGFLD*GGAPGL
Trigger: CAGACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCT...GGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR TCA 90 bp GTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCATCGCCTCGCCTAGATTaGAGATGTCCCCGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VGTGLVSRYGIPHLAQKASPRLD*RCPRVA
Trigger: CGCCACCCGGGGACATCTTCAATCTAGGCGAGGCGA...TGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGTTCTCCACAGCCGAGTaGTGGGCCATGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGFSTAE*WAMEEG
Trigger: GCCTTCCTCCATGGCCCATCACTCGGCTGTGGAGAA...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GTGATGGGCCATGGAGGAAGGCTTGCTCCCTCTCCCAAGTCCCAAGCCACCAATACAGGGACAGCACCGTaGCCATGGTGCTGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: VMGHGGRLAPSPKSQATNTGTAP*PWCCCA
Trigger: CGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGT...ATTGGTGGCTTGGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACGAGGAGCCCCCGGTCTaGGAACCCGAGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHEEPPV*EPESWL
Trigger: CAGCCAGCTCTCGGGTTCCCAGACCGGGGGCTCCTC...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp TCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAATGGACGCCTGGACGATaGCCCGTTTGGGCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPPLGMPPATRFCLRTLKWTPGR*PVWASL
Trigger: CAGGGACGCCCAAACGGGTCATCGTCCAGGCGTCCA...TTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACTGGACGCCTGGACGATaGCCCGTTTGGGCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHWTPGR*PVWASL
Trigger: CAGGGACGCCCAAACGGGTCATCGTCCAGGCGTCCA...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp TTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGTGGACGCCTGGACGATaGCCCGTTTGGGCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LMTERQRSQKASLQLSTRWTPGR*PVWASL
Trigger: CAGGGACGCCCAAACGGGTCATCGTCCAGGCGTCCA...CCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp AGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAACCGTTTGGGCGTCCCTaGGGAGGTGACGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQTSSSANTTNVAGSSRQPFGRP*GGDGRV
Trigger: CACCCTGCCGTCACCTCCGCAGGGACGCCCAAACGG...TTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCACAGCACCGTGCCCATaGTGCTGCTGCGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSTAPCP*CCCAPG
Trigger: GCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGT...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCTGGAGTTCTTCTTCTTaGCCGACACGGCCACGATTC +
Preference number: 4 (lower is better)
Translates to: PGRLSSPPLGMPPATRFCWSSSS*PTRPRF
Trigger: GAATCGTGGCCGTGTCGGCCAAGAAGAAGAACTCCA...GCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCTGGGCCGGTGGGGGCTaGGCGAATGTGGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LAALVLQVGEDLCEVVWVWAGGG*ANVDRL
Trigger: CAACCTGTCCACATTCGCCCAGCCCCCACCGGCCCA...GACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCGGGGCCTCCCACCTCTaGTCGCACGCGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSGASHL*SHAAAG
Trigger: TCCTGCTGCCGCGTGCGACCAGAGGTGGGAGGCCCC...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp GCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTaGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: APAWSQGMASLT*PRRQALLMGTC
Trigger: GCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp CTTCAGGTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGGCGTCCCTGCGGAGGTaGCGGCAGGGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQVGEDLCEVVWVGIYLQASLRR*RQGEGL
Trigger: AAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGC...CTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCCGCTCCCGGGAAGCGTaGTGCCCCCTTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSRSREA*CPLGSA
Trigger: GGCAGATCCAAGGGGGCAGCACGCTTCCCGGGAGCG...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp CAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGGGCTCCCAAAAGGCCTCCTTaGAGCTCTCCACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRGNGPKRPPCSSPPGRAPKRPP*SSPPGR
Trigger: CCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGG...AGCCCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGCGAATGTGGACAGGTTaGCGCACGACAGCGACTTCT +
Preference number: 4 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGRMWTG*RTTATS
Trigger: AGAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCG...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp ATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGGGGGCTGGGCGAATGTaGACAGGTTGGCGCACGACA +
Preference number: 4 (lower is better)
Translates to: MTERQRSQKASLQLSTRKGAGRM*TGWRTT
Trigger: TGTCGTGCGCCAACCTGTCCACATTCGCCCAGCCCC...CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCACGCTTCTTGTCCTCCTaGCCGCTCTCGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPRFLSS*PLSFFR
Trigger: CCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCG...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp TTTCCACTAGACCCGCTCAGCTTCGCCTCGCCTAGATaGAAGATGTCCCCGGGTGGCGGGGATCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FPLDPLSFASPR*KMSPGGGDLAS
Trigger: TGAGGCAAGATCCCCGCCACCCGGGGACATCTTCAATCTAGGCGAGGCGAAGCTGAGCGGGTCTAGTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAAGGGGCTTTCTTGACTaGGGAGGAGCCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: SQTSSSANTTNVAGSSRQRGFLD*GGAPGL
Trigger: CAGACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCT...TTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGACGGCCTGGAGCTCGTaGTCCGAGCCCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQTAWSS*SEPTSE
Trigger: CTCCGAGGTGGGCTCGGATCACGAGCTCCAGGCCGT...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp TCCTTGAGCCATGACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SLSHDAGYSAHRSRPRRSRRRPV*SSVGRH
Trigger: ATGCCGACCCACACTACTTCACACAGGTCTTCTCCG...GCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTCATGGCTCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR GCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGTCCCGGGAAGCGTGCTaGCCCCTTGGATCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQSREAC*PLGSAR
Trigger: CCGGGCAGATCCAAGGGGGCAGCACGCTTCCCGGGA...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACTGGCATCCCTCACCTTaGCCAGAAGGCAGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHWHPSP*PEGRRC
Trigger: GCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCA...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR GCA 90 bp TGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGTCCCAGGAACGGCTCTaGTGGGCCTCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSQGMASLTLPRRQALLMSQERL*WASGAA
Trigger: TGCTGCACCTGAGGCCCAGCAGAGCCGTTCCTGGGA...CATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp AGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGGGCTCCTTCCACCGCTaGACCGATTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: RWAPAWSQGMASLTLPRRGSFHR*TDYLTV
Trigger: GACTGTCAGATAATCGGTGCAGCGGTGGAAGGAGCC...CCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCCCAGCAGAGAGGAGGTaGTGTGTGAAGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TAQFAARFRQLRVIHTCAPAERR*CVKSVP
Trigger: TGGCACAGACTTCACACAGCACCTCCTCTCTGCTGG...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGTCACTGGTGGACGCCTaGACGATGACCCGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LMTERQRSQKASLQLSTRSLVDA*TMTRLG
Trigger: GCCCAAACGGGTCATCGTCCAGGCGTCCACCAGTGA...CCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp ATGACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCGCTTCTTGTCCTCCTaGCCGCTCTCGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MTQATVLTDPGLGGAASCRFLSS*PLSFFR
Trigger: CCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCG...ACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTCAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR CCA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCGGGAGGTCAGTGGCCTaGGTGGCTCTGAATACATCT +
Preference number: 4 (lower is better)
Translates to: TAQFAARFRQLRVIHTCAGRSVA*VALNTS
Trigger: AGATGTATTCAGAGCCACCCAGGCCACTGACCTCCC...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTCACCTGCAGCTGTCCTaGCATTTGCCACAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRFLSSWPLSFFRSEKTCHLQLS*HLPQGD
Trigger: GTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTG...ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS-3UTR TCA 90 bp AGAAATCAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGCGTCCCTGCGGAGGTaGCGGCAGGGTGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RNQQASRAIRSLTPRLVIASLRR*RQGEGL
Trigger: AAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGC...AATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTGATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp ACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TRQQDLKTGCVETQQRGGRRRPV*SSVGRH
Trigger: ATGCCGACCCACACTACTTCACACAGGTCTTCTCCG...ACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCGCGGCAGCAGGATCTaGAGACAGGCTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHRGSRI*RQAVWK
Trigger: TTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCG...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTCCGTTTGGGCGTCCCTaGGGAGGTGACGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGEDLCEVVWVGIYLQHLPFGRP*GGDGRV
Trigger: CACCCTGCCGTCACCTCCGCAGGGACGCCCAAACGG...AAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp ATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGCCCAAAAGGCCTCCTTaGAGCTCTCCACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MTERQRSQKASLQLSTRKPKRPP*SSPPGR
Trigger: CCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGG...CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp GGAGCCTCTGGGAGAGTGAATAACTCCACACAGGAGCCAGAAAAGGGCCTCCAATGTAAAGTGACCCTCTaGCTCCCCACCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GASGRVNNSTQEPEKGLQCKVTL*LPTPGP
Trigger: GGGACCTGGGGTGGGGAGGCAGAGGGTCACTTTACA...TTGGAGGCCCTTTTCTGGCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCGGGGCTGGGCGAATGTaGACAGGTTGGCGCACGACA +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSGAGRM*TGWRTT
Trigger: TGTCGTGCGCCAACCTGTCCACATTCGCCCAGCCCC...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TTTATCTGCAGCATCTTTGAGCTCATGAGGTTGATGACAGAGAGGCAACGGTCCAACCCGAGAGCTGGCTaGCCGGGGGTGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FICSIFELMRLMTERQRSNPRAG*PGVQAA
Trigger: AGCCGCCTGCACCCCCGGCCAGCCAGCTCTCGGGTT...GGACCGTTGCCTCTCTGTCATCAACCTCATGAGCTCAAAGATGCTGCAGATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGAGAGCACGGGGTCCGTaGGGGACAGGTGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQRARGP*GTGASG
Trigger: GCCTGAAGCACCTGTCCCCCACGGACCCCGTGCTCT...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGTTGAGTTCCCCAAAGTaGGAGGTCAGTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTSSSANTTNVAGSSRQGLSSPK*EVSGLG
Trigger: ACCCAGGCCACTGACCTCCCACTTTGGGGAACTCAA...CCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCGAAGATGTCCCCGGGTaGCGGGGATCTTGCCTCACG +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSEDVPG*RGSCLT
Trigger: CGTGAGGCAAGATCCCCGCCACCCGGGGACATCTTC...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCCTCAGGACTCTTAAACACCTGCAGCTGTCCTaGCATTTGCCACAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SPPLGMPPATRFCLRTLKHLQLS*HLPQGD
Trigger: GTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTG...TTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp ATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGGCCTTAGCCCTTAGGTaGGCACCGGCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: MTERQRSQKASLQLSTRKALALR*APAWSQ
Trigger: TTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGC...CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS-3UTR CCA 90 bp GTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGATTAACGGGTGGGGGTaGGGTCACCACATCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VSRYGIPHLAQKAGVANGINGWG*GHHIAF
Trigger: GAAGGCGATGTGGTGACCCCACCCCCACCCGTTAAT...CCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GGCGTTGCTAATGGGCACCTGCAGCTGTCCTGGCATTTGCCACAGGGTGACTGCCCAGCCACCAGGTTCTaGCTCAGGACTCTTAAATTG +
Preference number: 4 (lower is better)
Translates to: GVANGHLQLSWHLPQGDCPATRF*LRTLKL
Trigger: CAATTTAAGAGTCCTGAGGCAGAACCTGGTGGCTGG...GCAGTCACCCTGTGGCAAATGCCAGGACAGCTGCAGGTGCCCATTAGCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp ACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTAGGGTGATACACACATaGGCCCTCCTCCTGAGACTT +
Preference number: 4 (lower is better)
Translates to: TRQQDLKTGCVETQQRGGRVIHT*ALLLRL
Trigger: AAGTCTCAGGAGGAGGGCGCATGTGTGTATCACCCT...ACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCTGGATGCAACGTAACTaGACAGTTCGCAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TAQFAARFRQLRVIHTCAWMQRN*TVRSQV
Trigger: AACCTGGCTGCGAACTGTGCAGTTACGTTGCATCCA...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGCGAATGTGGACAGGTTaGCGCACGACAGCGACTTCT +
Preference number: 4 (lower is better)
Translates to: LMTERQRSQKASLQLSTRRMWTG*RTTATS
Trigger: AGAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCG...CCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp TGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGCGCTTCTTGTCCTCCTaGCCGCTCTCGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WSQGMASLTLPRRQALLMRFLSS*PLSFFR
Trigger: CCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCG...CATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp AGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGGCCAGTAGGGTAAGGTaGAAACCAAAACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RWAPAWSQGMASLTLPRRASRVR*KPKPAA
Trigger: AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGC...CCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAACACTCCCCAGTGGACTaGGCCTGGAAGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: SQTSSSANTTNVAGSSRQHSPVD*AWKTES
Trigger: GGATTCTGTCTTCCAGGCCCAGTCCACTGGGGAGTG...TTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp ACGACAGGCTTCACACTGAGGGAACTAGAGAGTTCTTCCCTTAGTCCCCACCACAAGGCAGCACGGAGATaGTGGAGTGGCGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TTGFTLRELESSSLSPHHKAARR*WSGASG
Trigger: ACCTGAAGCGCCACTCCATCATCTCCGTGCTGCCTT...GTGGTGGGGACTAAGGGAAGAACTCTCTAGTTCCCTCAGTGTGAAGCCTGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp GTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTAGGGGCTTTCTTGACTaGGGAGGAGCCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGEDLCEVVWVGIYLQHLRGFLD*GGAPGL
Trigger: CAGACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCT...AAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR GCA 90 bp TCCTTGAGCCATGACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCGGGTCGGCATTTATCTaGAGCATCTTTGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SLSHDAGYSAHRSRPRRSGSAFI*SIFELM
Trigger: CATGAGCTCAAAGATGCTGCAGATAAATGCCGACCC...GCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTCATGGCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR GCA 90 bp ATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGAGCTGTCCTGGCATTTaGCACAGGGTGACTGCACTA +
Preference number: 4 (lower is better)
Translates to: MTERQRSQKASLQLSTRKSCPGI*HRVTAL
Trigger: TAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT...CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS-3UTR GCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAAATACTGATGACCAGTaGAAGGGGAGAGAACACGAC +
Preference number: 4 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPNTDDQ*KGREHD
Trigger: GTCGTGTTCTCTCCCCTTGCACTGGTCATCAGTATT...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACACGGAGATGATGGAGTaGCGCTTCAGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHTEMME*RFRFLS
Trigger: GGACAAGAACCTGAAGCGCCACTCCATCATCTCCGT...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGGTTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCTCTGGTAGCTGCTGTTaGGCTGCACCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RLMTERQRSQKASLQLSTSGSCC*AAPSWS
Trigger: ACTCCAAGAAGGTGCAGCCCAACAGCAGCTACCAGA...GGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp GTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTGGGGCTGGGCGAATGTaGACAGGTTGGCGCACGACA +
Preference number: 4 (lower is better)
Translates to: VGEDLCEVVWVGIYLQHLGAGRM*TGWRTT
Trigger: TGTCGTGCGCCAACCTGTCCACATTCGCCCAGCCCC...AAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp AGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAACCAATACCACCAACGTaGCTGGGAGCAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SQTSSSANTTNVAGSSRQPIPPT*LGAADK
Trigger: CTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGG...TTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp ACTAAAGAAAAGCCCTTCTCCCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCCCAATACCACCAACGTaGCTGGGAGCAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: TKEKPFSRSRPRRSRFLSPIPPT*LGAADK
Trigger: CTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGG...GGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGGAGAAGGGCTTTTCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCTCTCTTCCCCACCTCTaGGAATGCCTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSSLPHL*ECLQPP
Trigger: TGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGA...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp ACTGCACAGTTCGCAGCCAGGTTCCGCCAGCTGAGGGTGATACACACATGCGCCTATCTGCAGCATCTTTaGGCTCATGAGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: TAQFAARFRQLRVIHTCAYLQHL*AHEVDD
Trigger: GTCATCAACCTCATGAGCTCAAAGATGCTGCAGATA...GGCGCATGTGTGTATCACCCTCAGCTGGCGGAACCTGGCTGCGAACTGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCTCCTTATCTGCAGCATCTTTaGGCTCATGAGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: QATVLTDPGLGGAASCPPYLQHL*AHEVDD
Trigger: GTCATCAACCTCATGAGCTCAAAGATGCTGCAGATA...AGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR GCA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAAGCGAGCGGTCCACGCTaGGCAGCCAGAGCACGGGGT +
Preference number: 4 (lower is better)
Translates to: SCPGICHRVTALHYSKEKASGPR*AARARG
Trigger: ACCCCGTGCTCTGGCTGCGCAGCGTGGACCGCTCGC...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GTGATGGGCCATGGAGGAAGGCTTGCTCCCTCTCCCAAGTCCCAAGCCACCAATGGGTCGGCATTTATCTaGAGCATCTTTGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: VMGHGGRLAPSPKSQATNGSAFI*SIFELM
Trigger: CATGAGCTCAAAGATGCTGCAGATAAATGCCGACCC...ATTGGTGGCTTGGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGCCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GGAGCCTCTGGGAGAGTGAATAACTCCACACAGGAGCCAGAAAAGGGCCTCCAATGTCTCACTGGTCCTTaGTGGGCAAGGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GASGRVNNSTQEPEKGLQCLTGP*WARLPL
Trigger: AAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACA...TTGGAGGCCCTTTTCTGGCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCCGAATGTGGACAGGTTaGCGCACGACAGCGACTTCT +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSRMWTG*RTTATS
Trigger: AGAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCG...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTTCACTGGTGGACGCCTaGACGATGACCCGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGEDLCEVVWVGIYLQHLSLVDA*TMTRLG
Trigger: GCCCAAACGGGTCATCGTCCAGGCGTCCACCAGTGA...AAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp ACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGCAGAGAGGAGGTGCAACTGGAATCCTGTaGATGCAACGTAACTGCACA +
Preference number: 4 (lower is better)
Translates to: TRQQDLKTGCVETQQRGGATGIL*MQRNCT
Trigger: TGTGCAGTTACGTTGCATCCACAGGATTCCAGTTGC...ACCTCCTCTCTGCTGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp GAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTGCATGGGTGACGGCCTGGAGCTCGTaGTCCGAGCCCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: EKNQILNYYSCGLFCAWVTAWSS*SEPTSE
Trigger: CTCCGAGGTGGGCTCGGATCACGAGCTCCAGGCCGT...CACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CTTCAGGTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCGGAGAAGACCTGTGTaGAGTAGTGTGGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LQVGEDLCEVVWVGIYLQRRRPV*SSVGRH
Trigger: ATGCCGACCCACACTACTTCACACAGGTCTTCTCCG...CTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR TCA 90 bp ACGACAGGCTTCACACTGAGGGAACTAGAGAGTTCTTCCCTTAGTCCCCACCACTTTGCGCAAGGCTCGTaGGTTCAAAAGTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TTGFTLRELESSSLSPHHFAQGS*VQKCPE
Trigger: CTCTGGGCACTTTTGAACTCACGAGCCTTGCGCAAA...GTGGTGGGGACTAAGGGAAGAACTCTCTAGTTCCCTCAGTGTGAAGCCTGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGCATTTGCCACAGGGTaGCTGCACTACATTATTCAA +
Preference number: 4 (lower is better)
Translates to: QTSSSANTTNVAGSSRQGAFATG*LHYIIQ
Trigger: TTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGC...CCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp CTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCCTGTGTGAAGTAGTGTaGGTCGGCATTTATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAALVLQVGEDLCEVVWVLCEVV*VGIYLQ
Trigger: CTGCAGATAAATGCCGACCCACACTACTTCACACAG...GACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp CAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTGTCTCCCTTGGTCTCAAGGTATaGCATCCCTCACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QQASRAIRSLTPRLVIVSLGLKV*HPSPCP
Trigger: TGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAG...GGAGACAATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGAACTATTATTCCTGTaGCTTGTTCTGTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPELLFL*LVLCMG
Trigger: ACCCATGCACAGAACAAGCCACAGGAATAATAGTTC...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp AGTGGCCTGGGTGGCTCTGAATACATCTTCTGGGTTTaGCGCAAGGCTCGTGAGTTCAAAAGTGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGLGGSEYIFWV*RKAREFKSAQS
Trigger: ACTCTGGGCACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCACCCAGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACTATCTGCAGCATCTTTaGGCTCATGAGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHYLQHL*AHEVDD
Trigger: GTCATCAACCTCATGAGCTCAAAGATGCTGCAGATA...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR TCA 90 bp CACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTAGCTGGGACCCAAATTaGGAGAAATTAATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: HRLGLKVWHPSPCPEGRRSWDPN*EKLMSQ
Trigger: TTGACTCATTAATTTCTCTCAATTTGGGTCCCAGCT...ACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR GCA 90 bp GTGGCTCTGAATACATCTTCTGGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGCTGCTGGGCCTCAGGTaGAGCAAGGCAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: VALNTSSGFCARLVSSKVLLGLR*SKADVL
Trigger: GAGAACATCTGCCTTGCTGCACCTGAGGCCCAGCAG...CACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAGGCAAATGGGTTCTTTaGTTGCACACTCAAGTATAT +
Preference number: 4 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPGKWVL*LHTQVY
Trigger: ATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCC...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAAAAATGCTCCTGGTTTaGATGCACAATATCACCGTA +
Preference number: 4 (lower is better)
Translates to: VGTGLVSRYGIPHLAQKAKMLLV*MHNITV
Trigger: TACGGTGATATTGTGCATGCAAACCAGGAGCATTTT...TGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp ATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACAAGCGTGCTGCCCCCTTaGATCTGCCCGGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: MANGFFACTLKYISCSFTSVLPP*ICPAGG
Trigger: GCCGCCTGCCGGGCAGATCCAAGGGGGCAGCACGCT...TGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GTGGCTCTGAATACATCTTCTGGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGTATAGTGGCCCACGGTaGCCGCGCCATCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: VALNTSSGFCARLVSSKVYSGPR*PRHPQT
Trigger: TGTTTGAGGATGGCGCGGCCACCGTGGGCCACTATA...CACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTGAACTGTGTGAAGTAGTGTaGGTCGGCATTTATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLVLLAALVLQVGEDLCELCEVV*VGIYLQ
Trigger: CTGCAGATAAATGCCGACCCACACTACTTCACACAG...TTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCTTGGTCTCAAGGTATaGCATCCCTCACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQLGLKV*HPSPCP
Trigger: TGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAG...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp GCCTGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACACCGAGTGATGGGCCATaGAGGAAGGCTTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AWKTESSVVSSHWSLFSTPSDGP*RKACSL
Trigger: GAGGGAGCAAGCCTTCCTCCATGGCCCATCACTCGG...TGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTGAGGTGACGGCAGGGTaGGGGGCTTTCTTGACTGAG +
Preference number: 4 (lower is better)
Translates to: HICVFTASRVRWKPKPAAEVTAG*GAFLTE
Trigger: CTCAGTCAAGAAAGCCCCTCACCCTGCCGTCACCTC...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp GTGGCTCTGAATACATCTTCTGGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGGAGCCTCTGGGAGAGTaGATAACTCCACACAGGAGC +
Preference number: 4 (lower is better)
Translates to: VALNTSSGFCARLVSSKVEPLGE*ITPHRS
Trigger: GCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTC...CACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp GCCTGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCTGCACCGATTATCTaGCAGTCCCAGGAACGGCTC +
Preference number: 4 (lower is better)
Translates to: AWKTESSVVSSHWSLFSTAAPII*QSQERL
Trigger: GAGCCGTTCCTGGGACTGTCAGATAATCGGTGCAGC...TGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACATGCGCCCTCCTCCTaGGACTTGGCACTGACCCTC +
Preference number: 4 (lower is better)
Translates to: SCPGICHRVTALHYSKEKHAPSS*DLALTL
Trigger: GAGGGTCAGTGCCAAGTCTCAGGAGGAGGGCGCATG...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGCATCTTTGGGCTGCACCTTCTTaGAGTTCTTCTTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGEDLCEVVWVGIYLQHLWAAPS*SSSSWP
Trigger: CGGCCAAGAAGAAGAACTCCAAGAAGGTGCAGCCCA...AAGATGCTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCAGGTGGGCACCGGCTTaGTCTCAAGGTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: WKTESSVVSSHWSLFSTARWAPA*SQGMAS
Trigger: GGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACCTGCAGCTGTTCAGGACTCTTAAATTaGGACTTCAATTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: ASLTLPRRQALLMGTCSCSGLLN*DFNFTA
Trigger: AGCTGTGAAATTGAAGTCCCAATTTAAGAGTCCTGA...ACAGCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCAACAATACCCACAGTTTaGTCAAAGAATAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPTIPTV*SKNSYR
Trigger: TCTGTAGCTATTCTTTGACCAAACTGTGGGTATTGT...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGAATGCATTGAATCCTTaGGCCATGACGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQNALNP*AMTQAT
Trigger: TGTAGCCTGCGTCATGGCTCAAGGATTCAATGCATT...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CTTCAGGTCGGAGAAGACCTGTGTGAAGTAGTGTGGGTCGGCATTTATCTGCAGAATGCATTGAATCCTTaGGCCATGACGCAGGCTACA +
Preference number: 4 (lower is better)
Translates to: LQVGEDLCEVVWVGIYLQNALNP*AMTQAT
Trigger: TGTAGCCTGCGTCATGGCTCAAGGATTCAATGCATT...CTGCAGATAAATGCCGACCCACACTACTTCACACAGGTCTTCTCCGACCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR TCA 90 bp GGACCCAAATTGAGAGAAATTAATGAGTCAAACCAGCTCATCGGCCAATACCACAGACTGTGGGAAAGGTaGGGCCCTTGGTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GPKLREINESNQLIGQYHRLWER*GPWWLC
Trigger: GCAAAGCCACCAAGGGCCTCACCTTTCCCACAGTCT...GTGGTATTGGCCGATGAGCTGGTTTGACTCATTAATTTCTCTCAATTTGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp CAGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAGGCAGGTCAGTCCTTTaGGTTCCCCAAAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QLSWHLPQGDCTTLFKRKGRSVL*VPQSGR
Trigger: CCTCCCACTTTGGGGAACTCAAAGGACTGACCTGCC...TTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACCCTGAGACTTGGCACTaGCCCTCCCTCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHPETWH*PSLFHA
Trigger: GGCATGGAAGAGGGAGGGTCAGTGCCAAGTCTCAGG...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTTGGCATCCCTCACCTTaGCCAGAAGGCAGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: KVVFIAAWQMGSLLAHSSWHPSP*PEGRRC
Trigger: GCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCA...ACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCCATCCTCAAACAGCGTaGCCTTCCGGTAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSMANGFFACTLKYISCSHPQTA*PSGSWE
Trigger: CTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATG...GGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGAAATCAGCAGGCTTCCAGAGCAATCAGGAGTCTCACTCCCCGTCTTGTAATTTGGGCTGCACCTTCTTaGAGTTCTTCTTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RNQQASRAIRSLTPRLVIWAAPS*SSSSWP
Trigger: CGGCCAAGAAGAAGAACTCCAAGAAGGTGCAGCCCA...AATTACAAGACGGGGAGTGAGACTCCTGATTGCTCTGGAAGCCTGCTGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TTTATCTGCAGCATCTTTGAGCTCATGAGGTTGATGACAGAGAGGCAACGGTCCTGGGCTGCACCTTCTTaGAGTTCTTCTTCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: FICSIFELMRLMTERQRSWAAPS*SSSSWP
Trigger: CGGCCAAGAAGAAGAACTCCAAGAAGGTGCAGCCCA...GGACCGTTGCCTCTCTGTCATCAACCTCATGAGCTCAAAGATGCTGCAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACGCAGCTCAGTTAGGGTaGCTGGCTCCAGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHAAQLG*LAPGAS
Trigger: AGAGGCTCCTGGAGCCAGCCACCCTAACTGAGCTGC...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp CAGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAAGGTGGGCACCGGCTTaGTCTCAAGGTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: QLSWHLPQGDCTTLFKRKRWAPA*SQGMAS
Trigger: GGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT...TTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp GGACCCAAATTGAGAGAAATTAATGAGTCAAACCAGCTCATCGGCCAATACCACATCCGGCTGTCTCACTaGTCCTTGCTGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GPKLREINESNQLIGQYHIRLSH*SLLGKA
Trigger: AGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGAT...GTGGTATTGGCCGATGAGCTGGTTTGACTCATTAATTTCTCTCAATTTGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp ATTAATGAGTCAAACCAGCTCATCGGCCAATACCACCAACGTGGCTGGGAGCAGGCATTTGCCACAGGGTaGCTGCACTACATTATTCAA +
Preference number: 4 (lower is better)
Translates to: INESNQLIGQYHQRGWEQAFATG*LHYIIQ
Trigger: TTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGC...CTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGAGCTGGTTTGACTCATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR GCA 90 bp GTGGCTCTGAATACATCTTCTGGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGTGTCCTTGGCGTTCTTaGTGTTCTGTACGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: VALNTSSGFCARLVSSKVCPWRS*CSVRPY
Trigger: ATACGGCCGTACAGAACAGCAAGAACGCCAAGGACA...CACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GAGAAAAACCAAATCCTGAACTATTATTCCTGTGGCTTGTTCTGTGCATGGGTGGCCTTAGCCCTTAGGTaGGCACCGGCTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EKNQILNYYSCGLFCAWVALALR*APAWSQ
Trigger: TTGAGACCAAGCCGGTGCCCACCTAAGGGCTAAGGC...CACCCATGCACAGAACAAGCCACAGGAATAATAGTTCAGGATTTGGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp GTAATTGTCTCCAAGATCCGGCTGTCTCACTGGTCCTaGCTGGGCAAGGCTTCCTCTTTAGAAGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: VIVSKIRLSHWS*LGKASSLEETQ
Trigger: TTGAGTTTCTTCTAAAGAGGAAGCCTTGCCCAGCAAGGACCAGTGAGACAGCCGGATCTTGGAGACAATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GTGGCTCTGAATACATCTTCTGGGTTTTGCGCAAGGCTCGTGAGTTCAAAAGTGCTGTGTGAAGTAGTGTaGGTCGGCATTTATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VALNTSSGFCARLVSSKVLCEVV*VGIYLQ
Trigger: CTGCAGATAAATGCCGACCCACACTACTTCACACAG...CACTTTTGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp ATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACACCCAAAAGGCCTCCTTaGAGCTCTCCACCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MANGFFACTLKYISCSFTPKRPP*SSPPGR
Trigger: CCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGG...TGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp GCCTGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAACATCTTCTGGGTTTTaGGCAAGGCTCGTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AWKTESSVVSSHWSLFSTTSSGF*ARLVSS
Trigger: TGAACTCACGAGCCTTGCGCAAAACCCAGAAGATGT...TGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAAAGCTGTCCTGGCATTTaGCACAGGGTGACTGCACTA +
Preference number: 4 (lower is better)
Translates to: SCPGICHRVTALHYSKEKSCPGI*HRVTAL
Trigger: TAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAATGGCCTTCCGGTAGCTaGGAGACAGGGACAGCACCG +
Preference number: 4 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKWPSGS*ETGTAP
Trigger: CGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCA...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAATCTGGTAGCTGCTGTTaGGCTGCACCTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SCPGICHRVTALHYSKEKSGSCC*AAPSWS
Trigger: ACTCCAAGAAGGTGCAGCCCAACAGCAGCTACCAGA...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CCA 90 bp AGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCAATCAGGGCGGTGTGTaGTCAAACGACCAGACACAA +
Preference number: 4 (lower is better)
Translates to: SSMANGFFACTLKYISCSNQGGV*SNDQTQ
Trigger: TTGTGTCTGGTCGTTTGACCACACACCGCCCTGATT...GGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACCCAGTGGACTGGGCCTaGAAGACAGAATCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHPVDWA*KTESSV
Trigger: TACAGAGGATTCTGTCTTCCAGGCCCAGTCCACTGG...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAACAGGAACGGCTCTGCTaGGCCTCAGGTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKQERLC*ASGAAR
Trigger: CCTTGCTGCACCTGAGGCCCAGCAGAGCCGTTCCTG...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GCCTGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACATCTGAATACATCTTCTaGGTTTTGCGCAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: AWKTESSVVSSHWSLFSTSEYIF*VLRKAR
Trigger: ACGAGCCTTGCGCAAAACCCAGAAGATGTATTCAGA...TGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp TGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGCCGTAGTGTCTTCACATTaGTCTTTGTTCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: WKTESSVVSSHWSLFSTAVVSSH*SLFSTA
Trigger: GGCTGTGGAGAACAAAGACCAATGTGAAGACACTAC...GGCTGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GGACCCAAATTGAGAGAAATTAATGAGTCAAACCAGCTCATCGGCCAATACCACAAACAGACACGCAACTaGAATCCTGTGGATGCAACG +
Preference number: 4 (lower is better)
Translates to: GPKLREINESNQLIGQYHKQTRN*NPVDAT
Trigger: CGTTGCATCCACAGGATTCCAGTTGCGTGTCTGTTT...GTGGTATTGGCCGATGAGCTGGTTTGACTCATTAATTTCTCTCAATTTGGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCACCAGCAGCTGCAAATaGTCAGTTGTAGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SSMANGFFACTLKYISCSTSSCK*SVVEIS
Trigger: GCTGATTTCTACAACTGATCATTTGCAGCTGCTGGT...GGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACGGGTCGGCATTTATCTaGAGCATCTTTGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHGSAFI*SIFELM
Trigger: CATGAGCTCAAAGATGCTGCAGATAAATGCCGACCC...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR GCA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTGTCCCAAGCCACCAATaGGGGAGAATTAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HICVFTASRVRWKPKPAAVPSHQ*GRIRKK
Trigger: TTTCTTTCTAATTCTCCCGCATTGGTGGCTTGGGAC...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp GCCTGGAAGACAGAATCCTCTGTAGTGTCTTCACATTGGTCTTTGTTCTCCACAGTCTTCATAGCAGCATaGCAAATGGGTTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AWKTESSVVSSHWSLFSTVFIAA*QMGSLL
Trigger: AAGCAAAGAACCCATTTGCCATGCTGCTATGAAGAC...TGTGGAGAACAAAGACCAATGTGAAGACACTACAGAGGATTCTGTCTTCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTCTGTGGCTTGTTCTGTaGATGGGTGTAATTTTCACA +
Preference number: 4 (lower is better)
Translates to: HICVFTASRVRWKPKPAALWLVL*MGVIFT
Trigger: TGTGAAAATTACACCCATGCACAGAACAAGCCACAG...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTCAGGTTCTTGTCCTTaGCGTTCTTGCTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KSSLHSSMANGFFACTLKSGSCP*RSCCSV
Trigger: TACAGAACAGCAAGAACGCCAAGGACAAGAACCTGA...CTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR TCA 90 bp AAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGAGCTGGGACCCAAATTaGGAGAAATTAATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: KSSLHSSMANGFFACTLKSWDPN*EKLMSQ
Trigger: TTGACTCATTAATTTCTCTCAATTTGGGTCCCAGCT...CTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAATGTTGTTCTGGTAGCTaGTGTTGGGCTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKCCSGS*CWAAPS
Trigger: AGAAGGTGCAGCCCAACAGCAGCTACCAGAACAACA...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CCA 90 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTGACACAAAATGCTCCTaGTTTGCATGCACAATATCA +
Preference number: 4 (lower is better)
Translates to: KVVFIAAWQMGSLLAHSSDTKCS*FACTIS
Trigger: TGATATTGTGCATGCAAACCAGGAGCATTTTGTGTC...ACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp AAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTaGTTCCTTTACACAATACTGATGACCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KWVLCLHTQVYQ*FLYTILMTSAR
Trigger: CCTTGCACTGGTCATCAGTATTGTGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
3UTR CAA 72 bp AAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTaGCTTGCACACTCAAGTATATCAGTTGTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KVVFIAAWQMGS*LAHSSISVVPL
Trigger: TAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR GCA 90 bp ATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACAAATGGGTTCTTTGCTTaGACACTCAAGTATATCAGT +
Preference number: 4 (lower is better)
Translates to: MANGFFACTLKYISCSFTNGFFA*TLKYIS
Trigger: ACTGATATACTTGAGTGTGCAAGCAAAGAACCCATT...TGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 90 bp GCGTGGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTGCCCATaGTGCTGCTGCGCGCCGGGCGGGGGCTCGCGCCCCTGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: AWPSGSWETGTAPCP*CCCAPGGGSRPCAP
Trigger: GGGCGCGCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 90 bp CCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTGCCCATGGTGCTaGTGCGCGCCGGGCGGGGGCTCGCGCCCCTGCGCGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PSGSWETGTAPCPWC*CAPGGGSRPCAPSL
Trigger: CAGGCTGGGCGCGCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 90 bp TGGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTGCCCATGGTaGTGCTGCGCGCCGGGCGGGGGCTCGCGCCCCTGCGCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: WPSGSWETGTAPCPW*CCAPGGGSRPCAPS
Trigger: GCTGGGCGCGCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 90 bp CAAACAGCGTGGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTaGCCATGGTGCTGCTGCGCGCCGGGCGGGGGCTCGCGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: QTAWPSGSWETGTAP*PWCCCAPGGGSRPC
Trigger: GCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGCTGTTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS TCA 90 bp GGGCGTCCCTGCGGAGGTGACGGCAGGGTGAGGGGCTTTCTTGACTaGGGAGGAGCCCCCGGTCTGGGAACCCGAGAGCTGGCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GRPCGGDGRVRGFLD*GGAPGLGTRELAGR
Trigger: CCGGCCAGCCAGCTCTCGGGTTCCCAGACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313401.4
ENST00000584716.1
ENST00000584792.5
CDS CCA 90 bp CCACGGTGGCCGCGCCATCCTCAAACAGCGTGGCCTTCCGGTAGCTaGGAGACAGGGACAGCACCGTGCCCATGGTGCTGCTGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: PRWPRHPQTAWPSGS*ETGTAPCPWCCCAP
Trigger: CGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACCGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 90 bp CGGCCGTATAGTGGCCCACGGTGGCCGCGCCATCCTCAAACAGCGTaGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTGCCCATGG +
Preference number: 5 (lower is better)
Translates to: RPYSGPRWPRHPQTA*PSGSWETGTAPCPW
Trigger: CCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACCGTGGGCCACTATACGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TCTCCGGCCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGTGGACGATGACCCGTTaGGGCGTCCCTGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SPAGQALFPTSGNASSHQWTMTR*GVPAEV
Trigger: CACCTCCGCAGGGACGCCCAAACGGGTCATCGTCCA...CTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGGCCGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS TCA 90 bp TGGACGATGACCCGTTTGGGCGTCCCTGCGGAGGTGACGGCAGGGTaGGGGGCTTTCTTGACTGAGGAGGAGCCCCCGGTCTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: WTMTRLGVPAEVTAG*GAFLTEEEPPVWEP
Trigger: GGGTTCCCAGACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGCCCAAACGGGTCATCGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313401.4
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp GACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCAGGAGGAGCCGCTTCTaGTCCTCCTGGCCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: DAGYSAHRSRPRRSRFLSRRSRF*SSWPLS
Trigger: CGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCT...GGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS CCA 90 bp CCTTGGCGTTCTTGCTGTTCTGTACGGCCGTATAGTGGCCCACGGTaGCCGCGCCATCCTCAAACAGCGTGGCCTTCCGGTAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PWRSCCSVRPYSGPR*PRHPQTAWPSGSWE
Trigger: CTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACCGTGGGCCACTATACGGCCGTACAGAACAGCAAGAACGCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp CCGGGCAGGCTCTCTTCCCCACCTCTGGGAATGCCTCCAGCCACCAGGTTCTGCTGGCGCTTCAGGTTCTaGTCCTTGGCGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGRLSSPPLGMPPATRFCWRFRF*SLAFLL
Trigger: CAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCA...GCAGAACCTGGTGGCTGGAGGCATTCCCAGAGGTGGGGAAGAGAGCCTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TTGAGCCATGACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCGCGAATGTGGACAGGTaGGCGCACGACAGCGACTTC +
Preference number: 5 (lower is better)
Translates to: LSHDAGYSAHRSRPRRSRANVDR*AHDSDF
Trigger: GAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCGC...GCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTCATGGCTCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR CAA 90 bp GTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGTGGACGATGACCCGTTaGGGCGTCCCTGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: VSRYGIPHLAQKAGVANGWTMTR*GVPAEV
Trigger: CACCTCCGCAGGGACGCCCAAACGGGTCATCGTCCA...CCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp AGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGATGGCATCCCTCACCTaGCCCAGAAGGCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: RWAPAWSQGMASLTLPRRMASLT*PRRQAL
Trigger: CAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCAT...CCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp AGCCGCTTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGCGAATGTGGACAGGTaGGCGCACGACAGCGACTTC +
Preference number: 5 (lower is better)
Translates to: SRFLSSWPLSFFRSEKTCANVDR*AHDSDF
Trigger: GAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCGC...ACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAAGCGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp GTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCATCCCAAAAGGCCTCCTaGCAGCTCTCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VGTGLVSRYGIPHLAQKASQKAS*QLSTRK
Trigger: CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGA...TGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp CAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGAAGGGCTTCCCAAAAGGCCTCCTaGCAGCTCTCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QRGNGPKRPPCSSPPGRASQKAS*QLSTRK
Trigger: CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGA...AGCCCTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACGCCATGGAGGAAGGCTaGCTCCCTCTCCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHAMEEG*LPLPSP
Trigger: GGGACTTGGGAGAGGGAGCAAGCCTTCCTCCATGGC...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp GGAGCCTCTGGGAGAGTGAATAACTCCACACAGGAGCCAGAAAAGGGCCTCCAACCCAGAAGGCAGGCGTaGCTAATGGGCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GASGRVNNSTQEPEKGLQPRRQA*LMGTCS
Trigger: GCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGG...TTGGAGGCCCTTTTCTGGCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TTCTTGTCCTCCTGGCCGCTCTCGTTCTTCAGGTCGGAGAAGACCTGTGTGAAGCCCAGAAGGCAGGCGTaGCTAATGGGCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FLSSWPLSFFRSEKTCVKPRRQA*LMGTCS
Trigger: GCTGCAGGTGCCCATTAGCAACGCCTGCCTTCTGGG...CTTCACACAGGTCTTCTCCGACCTGAAGAACGAGAGCGGCCAGGAGGACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS-3UTR CAA 90 bp TGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGCGAATGTGGACAGGTaGGCGCACGACAGCGACTTC +
Preference number: 5 (lower is better)
Translates to: WSQGMASLTLPRRQALLMANVDR*AHDSDF
Trigger: GAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCGC...CATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS TCA 90 bp TCTTGGCCGACACGGCCACGATTCTCTTCCAAGGCAGCACGGAGATaGTGGAGTGGCGCTTCAGGTTCTTGTCCTTGGCGTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: SWPTRPRFSSKAARR*WSGASGSCPWRSCC
Trigger: ACAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCACTCCATCATCTCCGTGCTGCCTTGGAAGAGAATCGTGGCCGTGTCGGCCAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp ATCTGCAGCATCTTTGAGCTCATGAGGTTGATGACAGAGAGGCAACGGTCCCAATGGACGATGACCCGTTaGGGCGTCCCTGCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ICSIFELMRLMTERQRSQWTMTR*GVPAEV
Trigger: CACCTCCGCAGGGACGCCCAAACGGGTCATCGTCCA...TTGGGACCGTTGCCTCTCTGTCATCAACCTCATGAGCTCAAAGATGCTGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp GACGCAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCAAATGCATTGAATCCTaGAGCCATGACGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: DAGYSAHRSRPRRSRFLSKCIES*SHDAGY
Trigger: GTAGCCTGCGTCATGGCTCAAGGATTCAATGCATTT...GGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR CAA 90 bp ACTAAAGAAAAGCCCTTCTCCCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCCAGCTGTCCTGGCATTaGCCACAGGGTGACTGCACT +
Preference number: 5 (lower is better)
Translates to: TKEKPFSRSRPRRSRFLSQLSWH*PQGDCT
Trigger: AGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCTG...GGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGGAGAAGGGCTTTTCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584716.1
CDS CCA 90 bp GACACGGCCACGATTCTCTTCCAAGGCAGCACGGAGATGATGGAGTaGCGCTTCAGGTTCTTGTCCTTGGCGTTCTTGCTGTTCTGTACG +
Preference number: 5 (lower is better)
Translates to: DTATILFQGSTEMME*RFRFLSLAFLLFCT
Trigger: CGTACAGAACAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCACTCCATCATCTCCGTGCTGCCTTGGAAGAGAATCGTGGCCGTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACTTGGAGTTCTTCTTCTaGGCCGACACGGCCACGATT +
Preference number: 5 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHLEFFF*ADTATI
Trigger: AATCGTGGCCGTGTCGGCCAAGAAGAAGAACTCCAA...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGCACTTGGGCTGCACCTTCTaGGAGTTCTTCTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SRYGIPHLAQKAGVANGHLGCTF*EFFFLA
Trigger: GGCCAAGAAGAAGAACTCCAAGAAGGTGCAGCCCAA...GTGCCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp TCATCGGCCAATACCACCAACGTGGCTGGGAGCAGCAGACAAGGGGGTAGGGGGTTCTTCAGGTTCTCATaGTTGAGGTGCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SSANTTNVAGSSRQGGRGFFRFS*LRCVML
Trigger: CAACATCACGCACCTCAACAATGAGAACCTGAAGAA...CCCCCTACCCCCTTGTCTGCTGCTCCCAGCCACGTTGGTGGTATTGGCCGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTCGGGTGGCGGGGATCTaGCCTCACGACCCCACTGGC +
Preference number: 5 (lower is better)
Translates to: HICVFTASRVRWKPKPAARVAGI*PHDPTG
Trigger: GCCAGTGGGGTCGTGAGGCAAGATCCCCGCCACCCG...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp CACCTCTGGTCGCACGCGGCAGCAGGATCTGAAGACAGGCTGTGTGGAAACCCATTCAGGTTCTCATTGTaGAGGTGCGTGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: HLWSHAAAGSEDRLCGNPFRFSL*RCVMLF
Trigger: GAACAACATCACGCACCTCAACAATGAGAACCTGAA...TGGGTTTCCACACAGCCTGTCTTCAGATCCTGCTGCCGCGTGCGACCAGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp CAGGCTACAGTGCTCACCGATCCAGGCCTAGGAGGAGCCGCTTCTTGTCCTCCTTTCTTCAGGTTCTCATaGTTGAGGTGCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: QATVLTDPGLGGAASCPPFFRFS*LRCVML
Trigger: CAACATCACGCACCTCAACAATGAGAACCTGAAGAA...AGGAGGACAAGAAGCGGCTCCTCCTAGGCCTGGATCGGTGAGCACTGTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584792.5
CDS-3UTR CAA 90 bp GTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGCAGGCGTTGCTAATGGGAGGCCCTTGGTGGCTTaGCTAGACACATACTGTACA +
Preference number: 5 (lower is better)
Translates to: VSRYGIPHLAQKAGVANGRPLVA*LDTYCT
Trigger: TGTACAGTATGTGTCTAGCAAAGCCACCAAGGGCCT...CCCATTAGCAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCAGGTTCAGGTTCTCATTGTaGAGGTGCGTGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LMTERQRSQKASLQLSTRFRFSL*RCVMLF
Trigger: GAACAACATCACGCACCTCAACAATGAGAACCTGAA...CCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp AGGTTGATGACAGAGAGGCAACGGTCCCAAAAGGCCTCCTTGCAGCTCTCCACCTTCAGGTTCTCATTGTaGAGGTGCGTGATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RLMTERQRSQKASLQLSTFRFSL*RCVMLF
Trigger: GAACAACATCACGCACCTCAACAATGAGAACCTGAA...GGTGGAGAGCTGCAAGGAGGCCTTTTGGGACCGTTGCCTCTCTGTCATCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS-3UTR CAA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAAAGGAGGAGCCGCTTCTaGTCCTCCTGGCCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: SCPGICHRVTALHYSKEKRRSRF*SSWPLS
Trigger: CGAGAGCGGCCAGGAGGACAAGAAGCGGCTCCTCCT...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp ACGACAGGCTTCACACTGAGGGAACTAGAGAGTTCTTCCCTTAGTCCCCACCACTACATCTTCTGGGTTTaGCGCAAGGCTCGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: TTGFTLRELESSSLSPHHYIFWV*RKAREF
Trigger: GAACTCACGAGCCTTGCGCAAAACCCAGAAGATGTA...GTGGTGGGGACTAAGGGAAGAACTCTCTAGTTCCCTCAGTGTGAAGCCTGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp AGGTGGGCACCGGCTTGGTCTCAAGGTATGGCATCCCTCACCTTGCCCAGAAGGGGTCAGTGCATTTTATaGAATCAGCACAGTACAAAA +
Preference number: 5 (lower is better)
Translates to: RWAPAWSQGMASLTLPRRGQCIL*NQHSTK
Trigger: TTTTGTACTGTGCTGATTCAATAAAATGCACTGACC...CCTTCTGGGCAAGGTGAGGGATGCCATACCTTGAGACCAAGCCGGTGCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACTTCGCCTCGCCTAGATaGAAGATGTCCCCGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHFASPR*KMSPGG
Trigger: GCCACCCGGGGACATCTTCAATCTAGGCGAGGCGAA...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp AAAAGTAGTCTTCATAGCAGCATGGCAAATGGGTTCTTTGCTTGCACACTCAAGATGGCATCCCTCACCTaGCCCAGAAGGCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: KSSLHSSMANGFFACTLKMASLT*PRRQAL
Trigger: CAACGCCTGCCTTCTGGGCAAGGTGAGGGATGCCAT...CTTGAGTGTGCAAGCAAAGAACCCATTTGCCATGCTGCTATGAAGACTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp GGAGCCTCTGGGAGAGTGAATAACTCCACACAGGAGCCAGAAAAGGGCCTCCAATGGCAAATGGGTTCTTaGCTTGCACACTCAAGTATA +
Preference number: 5 (lower is better)
Translates to: GASGRVNNSTQEPEKGLQWQMGS*LAHSSI
Trigger: TATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCA...TTGGAGGCCCTTTTCTGGCTCCTGTGTGGAGTTATTCACTCTCCCAGAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp AGCTGTCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAATCCCAAAAGGCCTCCTaGCAGCTCTCCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SCPGICHRVTALHYSKEKSQKAS*QLSTRK
Trigger: CTTCCTGGTGGAGAGCTGCAAGGAGGCCTTTTGGGA...TTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp ATGGCAAATGGGTTCTTTGCTTGCACACTCAAGTATATCAGTTGTTCCTTTACATTGTCCTTGGCGTTCTaGCTGTTCTGTACGGCCGTA +
Preference number: 5 (lower is better)
Translates to: MANGFFACTLKYISCSFTLSLAF*LFCTAV
Trigger: TACGGCCGTACAGAACAGCAAGAACGCCAAGGACAA...TGTAAAGGAACAACTGATATACTTGAGTGTGCAAGCAAAGAACCCATTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TCCTGGCATTTGCCACAGGGTGACTGCACTACATTATTCAAAAGAAAAACTCACTTCAGGTTCTTGTCCTaGGCGTTCTTGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SWHLPQGDCTTLFKRKTHFRFLS*AFLLFC
Trigger: ACAGAACAGCAAGAACGCCAAGGACAAGAACCTGAA...GTGAGTTTTTCTTTTGAATAATGTAGTGCAGTCACCCTGTGGCAAATGCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp GGACCCAAATTGAGAGAAATTAATGAGTCAAACCAGCTCATCGGCCAATACCACTTCTTCAGGTTCTCATaGTTGAGGTGCGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GPKLREINESNQLIGQYHFFRFS*LRCVML
Trigger: CAACATCACGCACCTCAACAATGAGAACCTGAAGAA...GTGGTATTGGCCGATGAGCTGGTTTGACTCATTAATTTCTCTCAATTTGGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313401.4
ENST00000584716.1
CDS-3UTR CAA 90 bp CACATTTGTGTTTTTACAGCCAGTAGGGTAAGGTGGAAACCAAAACCAGCAGCTCAAAATGCTCCTGGTTaGCATGCACAATATCACCGT +
Preference number: 5 (lower is better)
Translates to: HICVFTASRVRWKPKPAAQNAPG*HAQYHR
Trigger: ACGGTGATATTGTGCATGCAAACCAGGAGCATTTTG...AGCTGCTGGTTTTGGTTTCCACCTTACCCTACTGGCTGTAAAAACACAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS-3UTR CAA 90 bp TTTTTCTTAAGACACAAAATGCTCCTGGTTTGCATGCACAATATCACCGTAAAAAAATGCATTGAATCCTaGAGCCATGACGCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: FFLRHKMLLVCMHNITVKKCIES*SHDAGY
Trigger: GTAGCCTGCGTCATGGCTCAAGGATTCAATGCATTT...TTTTACGGTGATATTGTGCATGCAAACCAGGAGCATTTTGTGTCTTAAGAAAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 72 bp TGGGAGACAGGGACAGCACCGTGCCCATGGTGCTGCTaGGCGCCGGGCGGGGGCTCGCGCCCCTGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: WETGTAPCPWCC*APGGGSRPCAP
Trigger: GGGCGCGCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 72 bp AGCTGGGAGACAGGGACAGCACCGTGCCCATGGTGCTaGTGCGCGCCGGGCGGGGGCTCGCGCCCCTGCGCG +
Preference number: 6 (lower is better)
Translates to: SWETGTAPCPWC*CAPGGGSRPCA
Trigger: CGCGCAGGGGCGCGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 72 bp CCGGAGAGGAGGCGGGGGCGCTCCCGGGAAGCGTGCTaGCCCCTTGGATCTGCCCGGCAGGCGGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: PERRRGRSREAC*PLGSARQAAAP
Trigger: AGGAGCTGCCGCCTGCCGGGCAGATCCAAGGGGGCAGCACGCTTCCCGGGAGCGCCCCCGCCTCCTCTCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS GCA 72 bp TGGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCGTaGCCATGGTGCTGCTGCGCGCCGGGCGGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: WPSGSWETGTAP*PWCCCAPGGGS
Trigger: CGAGCCCCCGCCCGGCGCGCAGCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 72 bp AGCGGTCCACGCTGCGCAGCCAGAGCACGGGGTCCGTaGGGGACAGGTGCTTCAGGCGGTAGCACCGGCGGC +
Preference number: 6 (lower is better)
Translates to: SGPRCAARARGP*GTGASGGSTGG
Trigger: GCCGCCGGTGCTACCGCCTGAAGCACCTGTCCCCCACGGACCCCGTGCTCTGGCTGCGCAGCGTGGACCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS TCA 72 bp ACCCGTTTGGGCGTCCCTGCGGAGGTGACGGCAGGGTaGGGGGCTTTCTTGACTGAGGAGGAGCCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: TRLGVPAEVTAG*GAFLTEEEPPV
Trigger: GACCGGGGGCTCCTCCTCAGTCAAGAAAGCCCCTCACCCTGCCGTCACCTCCGCAGGGACGCCCAAACGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313401.4
ENST00000584716.1
ENST00000584792.5
CDS CCA 72 bp AGTGGCCCACGGTGGCCGCGCCATCCTCAAACAGCGTaGCCTTCCGGTAGCTGGGAGACAGGGACAGCACCG +
Preference number: 6 (lower is better)
Translates to: SGPRWPRHPQTA*PSGSWETGTAP
Trigger: CGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACCGTGGGCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 72 bp CCGCGCCATCCTCAAACAGCGTGGCCTTCCGGTAGCTaGGAGACAGGGACAGCACCGTGCCCATGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: PRHPQTAWPSGS*ETGTAPCPWCC
Trigger: GCAGCACCATGGGCACGGTGCTGTCCCTGTCTCCCAGCTACCGGAAGGCCACGCTGTTTGAGGATGGCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CAA 72 bp GGCTGGGCCGGTGGGGGCTGGGCGAATGTGGACAGGTaGGCGCACGACAGCGACTTCTTCAGGTTCTCATTG +
Preference number: 6 (lower is better)
Translates to: GWAGGGWANVDR*AHDSDFFRFSL
Trigger: CAATGAGAACCTGAAGAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCGCCCAGCCCCCACCGGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313401.4
ENST00000584716.1
ENST00000584792.5
CDS CCA 72 bp TCTTGCTGTTCTGTACGGCCGTATAGTGGCCCACGGTaGCCGCGCCATCCTCAAACAGCGTGGCCTTCCGGT +
Preference number: 6 (lower is better)
Translates to: SCCSVRPYSGPR*PRHPQTAWPSG
Trigger: ACCGGAAGGCCACGCTGTTTGAGGATGGCGCGGCCACCGTGGGCCACTATACGGCCGTACAGAACAGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 72 bp GCTGGGCCGGTGGGGGCTGGGCGAATGTGGACAGGTTaGCGCACGACAGCGACTTCTTCAGGTTCTCATTGT +
Preference number: 6 (lower is better)
Translates to: AGPVGAGRMWTG*RTTATSSGSHC
Trigger: ACAATGAGAACCTGAAGAAGTCGCTGTCGTGCGCCAACCTGTCCACATTCGCCCAGCCCCCACCGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313401.4
ENST00000584716.1
ENST00000584792.5
CDS TCA 72 bp AGGTACAGGCATGTCAGCAGGACGGCCTGGAGCTCGTaGTCCGAGCCCACCTCGGAGGAGATAACATCCCTG +
Preference number: 6 (lower is better)
Translates to: RYRHVSRTAWSS*SEPTSEEITSL
Trigger: CAGGGATGTTATCTCCTCCGAGGTGGGCTCGGATCACGAGCTCCAGGCCGTCCTGCTGACATGCCTGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS TCA 72 bp AGGTACAGGCATGTCAGCAGGACGGCCTGGAGCTCGTaGTCCGAGCCCACCTCGGAGGAGATAACATCCCCA +
Preference number: 6 (lower is better)
Translates to: RYRHVSRTAWSS*SEPTSEEITSP
Trigger: TGGGGATGTTATCTCCTCCGAGGTGGGCTCGGATCACGAGCTCCAGGCCGTCCTGCTGACATGCCTGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584716.1
ENST00000584792.5
CDS GCA 72 bp TGGAGTGGCGCTTCAGGTTCTTGTCCTTGGCGTTCTTaGTGTTCTGTACGGCCGTATAGTGGCCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: WSGASGSCPWRS*CSVRPYSGPRW
Trigger: CCACCGTGGGCCACTATACGGCCGTACAGAACAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS TCA 72 bp ACACGGCCACGATTCTCTTCCAAGGCAGCACGGAGATaGTGGAGTGGCGCTTCAGGTTCTTGTCCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: TRPRFSSKAARR*WSGASGSCPWR
Trigger: ACGCCAAGGACAAGAACCTGAAGCGCCACTCCATCATCTCCGTGCTGCCTTGGAAGAGAATCGTGGCCGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CAA 72 bp GGCAGCACGGAGATGATGGAGTGGCGCTTCAGGTTCTaGTCCTTGGCGTTCTTGCTGTTCTGTACGGCCGTA +
Preference number: 6 (lower is better)
Translates to: GSTEMMEWRFRF*SLAFLLFCTAV
Trigger: TACGGCCGTACAGAACAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCACTCCATCATCTCCGTGCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4
CDS CCA 72 bp ACGATTCTCTTCCAAGGCAGCACGGAGATGATGGAGTaGCGCTTCAGGTTCTTGTCCTTGGCGTTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: TILFQGSTEMME*RFRFLSLAFLL
Trigger: CAGCAAGAACGCCAAGGACAAGAACCTGAAGCGCCACTCCATCATCTCCGTGCTGCCTTGGAAGAGAATCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313401.4