Pregenerated sensors for CDK2AP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000167797Ensembl transcript IDs: ENST00000525402.5, ENST00000526447.1, ENST00000531178.1, ENST00000531506.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAGGCTTGGCTCAGGTGGCCTCCAGATGTCCTTCCTTCCCTCATaGAGGATAGTCCAGTGTCGGTTTCCTGAGCAGGGCGGCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SRLGSGGLQMSFLPS*RIVQCRFPEQGGLA Trigger: GGCCAGGCCGCCCTGCTCAGGAAACCGACACTGGACTATCCTTCATGAGGGAAGGAAGGACATCTGGAGGCCACCTGAGCCAAGCCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR CAA 90 bp | GATTCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCTAGGCTaGGCTCAGGTGGCCTCCAGATGTCCTTCCTTCCCTCATGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: DSKHLSGSNTGHPLG*AQVASRCPSFPHEG Trigger: TCCTTCATGAGGGAAGGAAGGACATCTGGAGGCCACCTGAGCCAAGCCTAGAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR-3UTR TCA 90 bp | ATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAATTTCAATTCGATTCAATCCTTCCTTCCCTCATaGAGGATAGTCCAGTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: IQIPMLFPGNGLNFNSIQSFLPS*RIVQCR Trigger: CCGACACTGGACTATCCTTCATGAGGGAAGGAAGGA...TTGAATCGAATTGAAATTGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR TCA 72 bp | GGCTCAGGTGGCCTCCAGATGTCCTTCCTTCCCTCATaGAGGATAGTCCAGTGTCGGTTTCCTGAGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GSGGLQMSFLPS*RIVQCRFPEQG Trigger: GCCCTGCTCAGGAAACCGACACTGGACTATCCTTCATGAGGGAAGGAAGGACATCTGGAGGCCACCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAATTTCAATGGACATCCTCTAGGCTaGGCTCAGGTGGCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PVEIQIPMLFPGNGLNFNGHPLG*AQVASR Trigger: TCTGGAGGCCACCTGAGCCAAGCCTAGAGGATGTCC...ATTGAAATTGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR TCA 90 bp | CTCTCTGGTAGTAATACTGGACATCCTCTAGGCTTGGCTCAGGTGGCCTCCAGACCAGTGTCGGTTTCCTaGGCAGGGCGGCCTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSGSNTGHPLGLAQVASRPVSVS*AGRPGL Trigger: GAGGCCAGGCCGCCCTGCTCAGGAAACCGACACTGG...TCTGGAGGCCACCTGAGCCAAGCCTAGAGGATGTCCAGTATTACTACCAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR CAA 72 bp | CACCTCTCTGGTAGTAATACTGGACATCCTCTAGGCTaGGCTCAGGTGGCCTCCAGATGTCCTTCCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HLSGSNTGHPLG*AQVASRCPSFP Trigger: AGGGAAGGAAGGACATCTGGAGGCCACCTGAGCCAAGCCTAGAGGATGTCCAGTATTACTACCAGAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR GCA 90 bp | CAATTCGATTCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCTAGGCTTGCCAGAGGAGGACCCCTaGCTCCCCACTCCCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QFDSKHLSGSNTGHPLGLPEEDP*LPTPFP Trigger: TGGAAAGGGAGTGGGGAGGCAGGGGTCCTCCTCTGG...CAAGCCTAGAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGAATCGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR CCA 90 bp | AAGGTTGCCCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCACTGAGCAGGGCGGCCTaGCCTCACTTACCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KVALLKYKFPCSSLEMDSLSRAA*PHLPLF Trigger: GAAGAGAGGTAAGTGAGGCCAGGCCGCCCTGCTCAG...TGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGGGCAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR TCA 90 bp | CCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAATTTCAATTCCTTCCTTCCCTCATaGAGGATAGTCCAGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PVEIQIPMLFPGNGLNFNSFLPS*RIVQCR Trigger: CCGACACTGGACTATCCTTCATGAGGGAAGGAAGGA...ATTGAAATTGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR CCA 90 bp | TCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCTAGGCTTGGCTCAGGTGATGAAATTAGAGGTTTaGTTAATCCTCAAGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SKHLSGSNTGHPLGLAQVMKLEV*LILKVA Trigger: GGCAACCTTGAGGATTAACCAAACCTCTAATTTCAT...CACCTGAGCCAAGCCTAGAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR GCA 90 bp | AAGGTTGCCCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAAAATACAAATTCCCATaGTCTTCCCTGGAAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: KVALLKYKFPCSSLEMDSKYKFP*SSLEMD Trigger: GTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTT...TGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGGGCAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR CCA 90 bp | AAGGTTGCCCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAGCTCTTCCCTGGAAATaGACTCAATTTCAATTCGAT | + |
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Preference number: 4 (lower is better) Translates to: KVALLKYKFPCSSLEMDSALPWK*TQFQFD Trigger: ATCGAATTGAAATTGAGTCCATTTCCAGGGAAGAGC...TGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGGGCAACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR CCA 90 bp | GTTGCCCTGTTGAAATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAATTTCCCATGCTCTTCCCTaGAAATGGACTCAATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: VALLKYKFPCSSLEMDSISHALP*KWTQFQ Trigger: TTGAAATTGAGTCCATTTCCAGGGAAGAGCATGGGA...AATTGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGGGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR TCA 90 bp | CTCAATTTCAATTCGATTCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCTCAAGGTTGCCCTGTTaGAATACAAATTCCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LNFNSIQNTSLVVILDILSRLPC*NTNSHA Trigger: AGCATGGGAATTTGTATTTCAACAGGGCAACCTTGA...GAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGAATCGAATTGAAATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| 3UTR CAA 72 bp | AAATTAGAGGTTTGGTTAATCCTCAAGGTTGCCCTGTaGAAATACAAATTCCCATGCTCTTCCCTGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: KLEVWLILKVAL*KYKFPCSSLEM Trigger: CATTTCCAGGGAAGAGCATGGGAATTTGTATTTCAACAGGGCAACCTTGAGGATTAACCAAACCTCTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR GCA 90 bp | CTCAATTTCAATTCGATTCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCGTTAATCCTCAAGGTTaGCCTGTTGAAATACAAATT | + |
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Preference number: 4 (lower is better) Translates to: LNFNSIQNTSLVVILDILVNPQG*PVEIQI Trigger: AATTTGTATTTCAACAGGGCAACCTTGAGGATTAAC...GAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGAATCGAATTGAAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS CCA 90 bp | CCTCCGCCTTCCGGACCTCGCACCTGTCTGCTCCGGATTGGGCGGTaGCCACCGCCCTCCGCAATTGGCGAGTTCGCGGCCCGGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PPPSGPRTCLLRIGR*PPPSAIGEFAARAG Trigger: GCCGGCCCGGGCCGCGAACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | GGGGTCTTCCCGGGCGCGGGCGCTACCCTCGCGCCTCACTCGCGCTaGTTCAGACGTCTGCTCCGCTCTGCCCAGTTTCGGCCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVFPGAGATLAPHSR*FRRLLRSAQFRPSR Trigger: CCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGCGCGAGGGTAGCGCCCGCGCCCGGGAAGACCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | CTCCGCTCTGCCCAGTTTCGGCCCAGCAGGGGTTGCTGTCGCAGCTaGCGTCGCCGCTGCCACCGGTGCCTTGCGCGCTTCTCCGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LRSAQFRPSRGCCRS*RRRCHRCLARFSAL Trigger: CAGAGCGGAGAAGCGCGCAAGGCACCGGTGGCAGCGGCGACGGCAGCTGCGACAGCAACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 90 bp | CGATTGGCCTCCGCCTTCCGGACCTCGCACCTGTCTGCTCCGGATTaGGCGGTGGCCACCGCCCTCCGCAATTGGCGAGTTCGCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: RLASAFRTSHLSAPD*AVATALRNWRVRGP Trigger: CGGGCCGCGAACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | GCGCGGGCGCTACCCTCGCGCCTCACTCGCGCTGCTTCAGACGTCTaGTCCGCTCTGCCCAGTTTCGGCCCAGCAGGGGTTGCTGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: ARALPSRLTRAASDV*SALPSFGPAGVAVA Trigger: TGCGACAGCAACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGCGCGAGGGTAGCGCCCGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | CAACCGCCGCCGATTGGCCTCCGCCTTCCGGACCTCGCACCTGTCTaGTCCGGATTGGGCGGTGGCCACCGCCCTCCGCAATTGGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: QPPPIGLRLPDLAPV*SGLGGGHRPPQLAS Trigger: ACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCGGCGGCGGTTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 90 bp | CACCTGTCTGCTCCGGATTGGGCGGTGGCCACCGCCCTCCGCAATTaGCGAGTTCGCGGCCCGGGCCGGCGCGCTCTCAATCCGATTAGT | + |
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Preference number: 5 (lower is better) Translates to: HLSAPDWAVATALRN*RVRGPGRRALNPIS Trigger: ACTAATCGGATTGAGAGCGCGCCGGCCCGGGCCGCGAACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | TACCCTCGCGCCTCACTCGCGCTGCTTCAGACGTCTGCTCCGCTCTaGCCAGTTTCGGCCCAGCAGGGGTTGCTGTCGCAGCTGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: YPRASLALLQTSAPL*PVSAQQGLLSQLPS Trigger: CGACGGCAGCTGCGACAGCAACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGCGCGAGGGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | TTGGTGCGCGAAGATGTCACTCGAGCCTCCTTATTGGCCGAGACCTaGCCCAGCAGGTCGCAACCGCCGCCGATTGGCCTCCGCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: LVREDVTRASLLAET*PSRSQPPPIGLRLP Trigger: CGGAAGGCGGAGGCCAATCGGCGGCGGTTGCGACCTGCTGGGGCAGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | GCCGGAAGGGCGAGCGGGCACGAATGCTCCCTCACTCCCGATTGGTaGGCGAAGATGTCACTCGAGCCTCCTTATTGGCCGAGACCTGCC | + |
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Preference number: 5 (lower is better) Translates to: AGRASGHECSLTPDW*AKMSLEPPYWPRPA Trigger: GGCAGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTTCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | GCCAGCAAACTGAGGCTCAGCGAGGGTAGGCGGCAGGCCCAGTATTaGAGAACTCAGGCCGTCTTCTCTTCGAGACCTCGACCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ASKLRLSEGRRQAQY*RTQAVFSSRPRPPG Trigger: GCCGGGCGGTCGAGGTCTCGAAGAGAAGACGGCCTGAGTTCTGCAATACTGGGCCTGCCGCCTACCCTCGCTGAGCCTCAGTTTGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000525402.5 ENST00000526447.1 ENST00000531178.1 |
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| CDS CCA 90 bp | CTCACTCCCGATTGGTGCGCGAAGATGTCACTCGAGCCTCCTTATTaGCCGAGACCTGCCCCAGCAGGTCGCAACCGCCGCCGATTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTPDWCAKMSLEPPY*PRPAPAGRNRRRLA Trigger: GGCCAATCGGCGGCGGTTGCGACCTGCTGGGGCAGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 90 bp | CTGGCCGGAAGGGCGAGCGGGCACGAATGCTCCCTCACTCCCGATTaGTGCGCGAAGATGTCACTCGAGCCTCCTTATTGGCCGAGACCT | + |
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Preference number: 5 (lower is better) Translates to: LAGRASGHECSLTPD*CAKMSLEPPYWPRP Trigger: AGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTTCCGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 90 bp | CCCCTGGTAAATAGAGGTCTGGCCGGAAGGGCGAGCGGGCACGAATaGTCCCTCACTCCCGATTGGTGCGCGAAGATGTCACTCGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PLVNRGLAGRASGHE*SLTPDWCAKMSLEP Trigger: AGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTTCCGGCCAGACCTCTATTTACCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS TCA 90 bp | GATGTCCTTCCTTCCCTCATGAAGGATAGTCCAGTGTCGGTTTCCTaGGCAGGGCGGCCTGGCCTCACTTACCTCTCTTCAGGCGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DVLPSLMKDSPVSVS*AGRPGLTYLSSGAP Trigger: TGGAGCGCCTGAAGAGAGGTAAGTGAGGCCAGGCCGCCCTGCTCAGGAAACCGACACTGGACTATCCTTCATGAGGGAAGGAAGGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526447.1 ENST00000531506.1 |
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| CDS TCA 90 bp | GACCGGGTTCGCCCGATTCCCTCCAAAGGATGCTTCATTCCATGCTaGTCAACTTCAGGGACAAATCCCTCCCACTGCGCTCCACCTACA | + |
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Preference number: 5 (lower is better) Translates to: DRVRPIPSKGCFIPC*STSGTNPSHCAPPT Trigger: TGTAGGTGGAGCGCAGTGGGAGGGATTTGTCCCTGAAGTTGATCAGCATGGAATGAAGCATCCTTTGGAGGGAATCGGGCGAACCCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000525402.5 ENST00000526447.1 |
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| CDS-3UTR CAA 90 bp | CTCAATTTCAATTCGATTCAAAACACCTCTCTGGTAGTAATACTGGACATCCTCGGACATCCTCTAGGCTaGGCTCAGGTGGCCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LNFNSIQNTSLVVILDILGHPLG*AQVASR Trigger: TCTGGAGGCCACCTGAGCCAAGCCTAGAGGATGTCC...GAGGATGTCCAGTATTACTACCAGAGAGGTGTTTTGAATCGAATTGAAATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS-3UTR CAA 90 bp | ATACAAATTCCCATGCTCTTCCCTGGAAATGGACTCAATTTCAATTCGATTCAAGATGAAATTAGAGGTTaGGTTAATCCTCAAGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: IQIPMLFPGNGLNFNSIQDEIRG*VNPQGC Trigger: GCAACCTTGAGGATTAACCAAACCTCTAATTTCATC...TTGAATCGAATTGAAATTGAGTCCATTTCCAGGGAAGAGCATGGGAATTTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531506.1 |
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| CDS GCA 72 bp | CCCAGCAGGGGTTGCTGTCGCAGCTGCCGTCGCCGCTaGCACCGGTGCCTTGCGCGCTTCTCCGCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRGCCRSCRRR*HRCLARFSALG Trigger: CCCCAGAGCGGAGAAGCGCGCAAGGCACCGGTGGCAGCGGCGACGGCAGCTGCGACAGCAACCCCTGCTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | CCGGGCGCGGGCGCTACCCTCGCGCCTCACTCGCGCTaGTTCAGACGTCTGCTCCGCTCTGCCCAGTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PGAGATLAPHSR*FRRLLRSAQFR Trigger: CCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGCGCGAGGGTAGCGCCCGCGCCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CAA 90 bp | CCGATTGGCCTCCGCCTTCCGGACCTCGCACCTGTCTGCTCCGGATaGGGCGGTGGCCACCGCCCTCCGCAATTGGCGAGTTCGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PIGLRLPDLAPVCSG*GGGHRPPQLASSRP Trigger: GGGCCGCGAACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | CCGATTGGCCTCCGCCTTCCGGACCTCGCACCTGTCTaGTCCGGATTGGGCGGTGGCCACCGCCCTCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: PIGLRLPDLAPV*SGLGGGHRPPQ Trigger: TTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 72 bp | TCCGGACCTCGCACCTGTCTGCTCCGGATTGGGCGGTaGCCACCGCCCTCCGCAATTGGCGAGTTCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SGPRTCLLRIGR*PPPSAIGEFAA Trigger: GGCCGCGAACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 72 bp | CGAGACCTGCCCCAGCAGGTCGCAACCGCCGCCGATTaGCCTCCGCCTTCCGGACCTCGCACCTGTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RDLPQQVATAAD*PPPSGPRTCLL Trigger: GAGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCGGCGGCGGTTGCGACCTGCTGGGGCAGGTCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CAA 72 bp | CCGAGACCTGCCCCAGCAGGTCGCAACCGCCGCCGATaGGCCTCCGCCTTCCGGACCTCGCACCTGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PRPAPAGRNRRR*ASAFRTSHLSA Trigger: AGCAGACAGGTGCGAGGTCCGGAAGGCGGAGGCCAATCGGCGGCGGTTGCGACCTGCTGGGGCAGGTCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CAA 72 bp | CTCCGCCTTCCGGACCTCGCACCTGTCTGCTCCGGATaGGGCGGTGGCCACCGCCCTCCGCAATTGGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: LRLPDLAPVCSG*GGGHRPPQLAS Trigger: ACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 72 bp | TCCGCCTTCCGGACCTCGCACCTGTCTGCTCCGGATTaGGCGGTGGCCACCGCCCTCCGCAATTGGCGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SAFRTSHLSAPD*AVATALRNWRV Trigger: AACTCGCCAATTGCGGAGGGCGGTGGCCACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | GCCTCACTCGCGCTGCTTCAGACGTCTGCTCCGCTCTaGCCAGTTTCGGCCCAGCAGGGGTTGCTGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASLALLQTSAPL*PVSAQQGLLSQ Trigger: CTGCGACAGCAACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | CTACCCTCGCGCCTCACTCGCGCTGCTTCAGACGTCTaGTCCGCTCTGCCCAGTTTCGGCCCAGCAGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LPSRLTRAASDV*SALPSFGPAGV Trigger: AACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGACGTCTGAAGCAGCGCGAGTGAGGCGCGAGGGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | GAAGATGTCACTCGAGCCTCCTTATTGGCCGAGACCTaGCCCAGCAGGTCGCAACCGCCGCCGATTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EDVTRASLLAET*PSRSQPPPIGL Trigger: GAGGCCAATCGGCGGCGGTTGCGACCTGCTGGGGCAGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CCA 72 bp | GATTGGTGCGCGAAGATGTCACTCGAGCCTCCTTATTaGCCGAGACCTGCCCCAGCAGGTCGCAACCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: DWCAKMSLEPPY*PRPAPAGRNRR Trigger: GCGGCGGTTGCGACCTGCTGGGGCAGGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CAA 90 bp | TCTGGCCGGAAGGGCGAGCGGGCACGAATGCTCCCTCACTCCCGATaGGTGCGCGAAGATGTCACTCGAGCCTCCTTATTGGCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: SGRKGERARMLPHSR*VREDVTRASLLAET Trigger: GGTCTCGGCCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTTCCGGCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | AATAGAGGTCTGGCCGGAAGGGCGAGCGGGCACGAATaGTCCCTCACTCCCGATTGGTGCGCGAAGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: NRGLAGRASGHE*SLTPDWCAKMS Trigger: TGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTTCCGGCCAGACCTCTATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS GCA 72 bp | CTGAGGCTCAGCGAGGGTAGGCGGCAGGCCCAGTATTaGAGAACTCAGGCCGTCTTCTCTTCGAGACCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LRLSEGRRQAQY*RTQAVFSSRPR Trigger: TCGAGGTCTCGAAGAGAAGACGGCCTGAGTTCTGCAATACTGGGCCTGCCGCCTACCCTCGCTGAGCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000525402.5 ENST00000526447.1 ENST00000531178.1 |
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| CDS CCA 72 bp | AGGGCGAGCGGGCACGAATGCTCCCTCACTCCCGATTaGTGCGCGAAGATGTCACTCGAGCCTCCTTATTGG | + |
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Preference number: 6 (lower is better) Translates to: RASGHECSLTPD*CAKMSLEPPYW Trigger: CCAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS CAA 72 bp | AAGGGCGAGCGGGCACGAATGCTCCCTCACTCCCGATaGGTGCGCGAAGATGTCACTCGAGCCTCCTTATTG | + |
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Preference number: 6 (lower is better) Translates to: KGERARMLPHSR*VREDVTRASLL Trigger: CAATAAGGAGGCTCGAGTGACATCTTCGCGCACCAATCGGGAGTGAGGGAGCATTCGTGCCCGCTCGCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525402.5 |
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| CDS TCA 72 bp | CGCCCGATTCCCTCCAAAGGATGCTTCATTCCATGCTaGTCAACTTCAGGGACAAATCCCTCCCACTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RPIPSKGCFIPC*STSGTNPSHCA Trigger: AGCGCAGTGGGAGGGATTTGTCCCTGAAGTTGATCAGCATGGAATGAAGCATCCTTTGGAGGGAATCGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000525402.5 ENST00000526447.1 |
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