RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK20 (Homo sapiens)

Ensembl gene IDs: ENSG00000156345

Ensembl transcript IDs: ENST00000325303.9, ENST00000336654.9, ENST00000375871.8, ENST00000375883.7, ENST00000459720.5, ENST00000486228.7, ENST00000603475.1, ENST00000604175.5, ENST00000605159.5, ENST00000605591.1

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGGGAGGCCTTGGAGGGTGAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: ASRPTLARAKGQGVV*AHCGHGEALEGEAR
Trigger: CCTGGCTTCACCCTCCAAGGCCTCCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR CCA 90 bp AGGGCCAACTTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTC +
Preference number: 1 (lower is better)
Translates to: RANFSPLQDEGPNQL*VQQRLLKRPVHVEV
Trigger: GACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAAGTTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR TCA 90 bp TCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: SPLLDWMFSYSWLGT*PLPRDQPSQGLRGR
Trigger: CCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 90 bp GAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACTGTCCTGATGGGTACGTCAGTAGCA +
Preference number: 1 (lower is better)
Translates to: EAAPRQASSFCICRP*LAAELTVLMGTSVA
Trigger: TGCTACTGACGTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 90 bp TACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: YVSSTQKVRLTEHRP*ISSARLDVLILLAG
Trigger: CCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR GCA 90 bp CACACAGAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTC +
Preference number: 1 (lower is better)
Translates to: HTEGKAHRAQAMNLL*STGCSHTLGWEHDL
Trigger: GAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 90 bp CCTAGACTTCTGTCTCCCTCACTTCTAAATGAGTGCTCAGTGATGTaGAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGT +
Preference number: 1 (lower is better)
Translates to: PRLLSPSLLNECSVM*STQESLRAKVAMPG
Trigger: ACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTTCACATCACTGAGCACTCATTTAGAAGTGAGGGAGACAGAAGTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 2 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR CCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 2 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 2 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR CCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 2 (lower is better)
Translates to: GNMTSASRPTLARAKGQGGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR TCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 2 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 2 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 2 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR GCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 2 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR TCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 2 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 2 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR GCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 2 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 2 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR CAA 90 bp GGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTaGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GSSTKAGIVILHMQA*TGSRAHCPDGYVSS
Trigger: GCTACTGACGTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 2 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: STGCSHTLGWEHDLCLETEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 2 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 2 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 2 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 2 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: AGIVILHMQALTGSRAHCCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCACTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 2 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: AGIVILHMQALTGSRAHCYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTATGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 2 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 2 (lower is better)
Translates to: IVILHMQALTGSRAHCPDTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 2 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR GCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCAGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCACCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 2 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 2 (lower is better)
Translates to: IVILHMQALTGSRAHCPDSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 2 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR GCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR GCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 2 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR CCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCATCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR GCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 2 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR CCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR TCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 2 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR GCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 2 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCATCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR TCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAACTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 2 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR GCA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: SPSIISSSASGSTSFHVSAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR GCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAATGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 2 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR-3UTR TCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAATCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 2 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
3UTR TCA 72 bp GGTGAAGCCAGGCAGGTGGCAGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGGCAGACGGGACCAGGG +
Preference number: 3 (lower is better)
Translates to: GEARQVAEEQVD*VVLRSRQTGPG
Trigger: CCCTGGTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 72 bp GGCAGGTGGCAGAGGAACAGGTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGACCAGGGCCAACTTCTC +
Preference number: 3 (lower is better)
Translates to: GRWQRNRWTEWS*GAGRRDQGQLL
Trigger: GAGAAGTTGGCCCTGGTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTCTGCCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR CCA 72 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCAC +
Preference number: 3 (lower is better)
Translates to: FSPLQDEGPNQL*VQQRLLKRPVH
Trigger: GTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
3UTR-3UTR CAA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCTCTGCACTTCTCCTaGACCAGGAGGCAGCACTCG +
Preference number: 3 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPSLHFS*TRRQHS
Trigger: CGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAGA...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 72 bp CCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACTGTCCTGATGGGTACG +
Preference number: 3 (lower is better)
Translates to: PRQASSFCICRP*LAAELTVLMGT
Trigger: CGTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR CCA 72 bp CTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTCGAGACCAACCCTCGC +
Preference number: 3 (lower is better)
Translates to: LLCSTGCSHTLG*EHDLCLETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 72 bp CTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAACCCTCGCAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: LDWMFSYSWLGT*PLPRDQPSQGL
Trigger: TAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 3 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR GCA 72 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCATACTCTTGGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: GKAHRAQAMNLL*STGCSHTLGWE
Trigger: TTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 3 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp CACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 3 (lower is better)
Translates to: HSGKQHQGRHRHSAYAGLDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...AAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 3 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR TCA 72 bp AGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTGGATGTTCTCATACTC +
Preference number: 3 (lower is better)
Translates to: STQKVRLTEHRP*ISSARLDVLIL
Trigger: GAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 3 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
3UTR-3UTR CAA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 3 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGGCCCTGGATGGGCCTTaGGGGCAGGTCCCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGALDGP*GQVPLD
Trigger: GTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGC...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGTGGGCTAGTGGCCTCTaGGCATGGCGCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGWASGL*AWRTTS
Trigger: CGAGGTGGTGCGCCATGCCCAGAGGCCACTAGCCCA...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGGAGCTCGCACGCTGTTaGCTAGCAACAGCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGELARC*LATARQ
Trigger: CTGCCGCGCTGTTGCTAGGCAACAGCGTGCGAGCTC...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR GCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCCGATGCGGCCCAGGATaGAGTACTGGTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPRCGPG*STGPSR
Trigger: GCGGGATGGACCAGTACTGCATCCTGGGCCGCATCG...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPEAAAV*GKDSSQ
Trigger: CTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTC...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGEAAAV*GKDSSQ
Trigger: CTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTC...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGTGCAGCCCACAGACCTaGTGGCCACCTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGCSPQT*WPPGVC
Trigger: ACACACACCAGGTGGCCACCAGGTCTGTGGGCTGCA...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGCACAGATCGACGCCCTaGTCATACTGGCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGHRSTP*SYWRAP
Trigger: TGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTG...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325303.9
CDS-3UTR TCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGGCGCCCTCCCCGATaGGGCCCAGGATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLGRPPR*GPGCST
Trigger: AGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTATCCCGCTGCAGTCGTaGGCCTGTGCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGIPLQS*ACAPVP
Trigger: GGGCACAGGGGCACAGGCCCACGACTGCAGCGGGAT...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGCAGAGGGTCTCCTGCTaGATCCCCAACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGQRVSC*IPNWSH
Trigger: ATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTG...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGCAGGCAGGGGAGCTGTaGAGAAGTACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGQAGEL*RSTDGG
Trigger: TCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTG...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGTCCCCCTAGACGCTaGGGAATCGGCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMGPPRR*GIGSSD
Trigger: ATCTGAGCTGCCGATTCCTCAGCGTCTAGGGGGACC...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGACCCAGCAGATCCAATaGCTGGGGAGAGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGTQQIQ*LGRDVR
Trigger: CCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGT...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGAGAGCCTTGGAAGCTaGGATGCGCTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMESLGS*DALVRR
Trigger: CCTCCTCACCAGCGCATCGCAGCTTCCAAGGCTCTC...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGCCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGTTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGLGPPS*GQLSRQ
Trigger: CTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAA...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTAGCTCCGGCCAGACTTaGGGGTTTGGGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGSSGQT*GFGVPK
Trigger: CTTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCT...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGGGGCGCCCTCCCCGATaGGGCCCAGGATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWGRPPR*GPGCST
Trigger: AGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCC...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR GCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCTCGCCAGTCTCCACGTaGTTGGCCTTGAAGACGATG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPSPVST*LALKTM
Trigger: CATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGA...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGGGGAGCTTGGAAGCTaGGATGCGCTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGGELGS*DALVRR
Trigger: CCTCCTCACCAGCGCATCGCAGCTTCCAAGCTCCCC...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCATCCCGCTGCAGTCGTaGGCCTGTGCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSIPLQS*ACAPVP
Trigger: GGGCACAGGGGCACAGGCCCACGACTGCAGCGGGAT...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLISRRA*LGKPSS
Trigger: GGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGAT...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGCCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGGGCTCGGTACCACCTaGTGGCCACCTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGGLGTT*WPPGVC
Trigger: ACACACACCAGGTGGCCACCAGGTGGTACCGAGCCC...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325303.9
CDS-3UTR TCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPPDPTA*TQRPAQ
Trigger: TTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGG...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGCAGGCAGGGGAGCTGTaGAGAAGTACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMQAGEL*RSTDGG
Trigger: TCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTG...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGAGTCCGGCAGCTCAGTaGGCTCCTGGTGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQSPAAQ*APGGHL
Trigger: CAGGTGGCCACCAGGAGCTCACTGAGCTGCCGGACT...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS-3UTR TCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTGCGTCGAGTCAGGGGTaGCAGCTCCGGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCASSQG*QLRAPL
Trigger: CAGTGGGGCCCGGAGCTGTCACCCCTGACTCGACGC...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375883.7
CDS-3UTR GCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGACTGGTCCATCCCGCTaGAGTCGTGGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWTGPSR*SRGPVP
Trigger: GGGCACAGGCCCACGACTGCAGCGGGATGGACCAGT...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR GCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACCATGCGCCGAGAGCGTaGCCGCAGCAGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYHAPRA*PQQGPR
Trigger: CCGTGGGCCCTGCTGCGGGCACGCTCTCGGCGCATG...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375883.7
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCGGCAGCTGACCACTaGGGCGGTTCCTGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQAAADH*GGSCRR
Trigger: TCGCCTACAGGAACCGCCCCAGTGGTCAGCTGCCGC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR CCA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGACAATGTTGTTGGCATaGCAGAAGGCGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGTMLLA*QKATPL
Trigger: CAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGT...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATGCCCTGGATGGGCCTTaGGGGCAGGTCCCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHALDGP*GQVPLD
Trigger: GTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGC...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGAGCTCCGGCCAGACTTaGGGGTTTGGGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRSSGQT*GFGVPK
Trigger: CTTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCT...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR TCA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 4 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCGATGCGGCCCAGGATaGAGTACTGGTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSRCGPG*STGPSR
Trigger: GCGGGATGGACCAGTACTGCATCCTGGGCCGCATCG...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTGGGCGCCCTCCCCGATaGGGCCCAGGATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCGRPPR*GPGCST
Trigger: AGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCC...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGACCCAGCAGATCCAATaGCTGGGGAGAGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLTQQIQ*LGRDVR
Trigger: CCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGT...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAGCGGCAGCTGACCACTaGGGCGGTTCCTGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPAAADH*GGSCRR
Trigger: TCGCCTACAGGAACCGCCCCAGTGGTCAGCTGCCGC...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR CCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTATCCCGCTGCAGTCGTaGGCCTGTGCCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCIPLQS*ACAPVP
Trigger: GGGCACAGGGGCACAGGCCCACGACTGCAGCGGGAT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSISRRA*LGKPSS
Trigger: GGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGAT...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMKASTV*EHSLQL
Trigger: CAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTT...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTGGGCTAGTGGCCTCTaGGCATGGCGCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSWASGL*AWRTTS
Trigger: CGAGGTGGTGCGCCATGCCCAGAGGCCACTAGCCCA...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGTCCGCTATCTTGAGCTaGCCTGAGGCGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGSAILS*PEALMS
Trigger: GCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGA...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAGCCCTGGATGGGCCTTaGGGGCAGGTCCCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSALDGP*GQVPLD
Trigger: GTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGC...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACGCCCTGGATGGGCCTTaGGGGCAGGTCCCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHALDGP*GQVPLD
Trigger: GTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGC...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTCAGAGGGTCTCCTGCTaGATCCCCAACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGQRVSC*IPNWSH
Trigger: ATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTG...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGATGTGGGCAGGCAGGGGAGCTTaGAAGCTGCGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GFNSDSSRGRSTWKSWMWAGRGA*KLRCAG
Trigger: ACCAGCGCATCGCAGCTTCCAAGCTCCCCTGCCTGC...CCACATCCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR TCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTTTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGLGPPS*GQLSRQ
Trigger: CTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAA...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGTATCTTGAGCTGGCCTaGGGCGCTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLYLELA*GADEQV
Trigger: AACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATA...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATAGCTCCGGCCAGACTTaGGGGTTTGGGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHSSGQT*GFGVPK
Trigger: CTTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCT...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCAGTCCGGCAGCTCAGTaGGCTCCGGCCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSSPAAQ*APARLE
Trigger: CTCAAGTCTGGCCGGAGCTCACTGAGCTGCCGGACT...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGATGTGGGGTCCCCCTAGACGCTaGGGAATCGGCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GFNSDSSRGRSTWKSWMWGPPRR*GIGSSD
Trigger: ATCTGAGCTGCCGATTCCTCAGCGTCTAGGGGGACC...CCACATCCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAGCAGTCGTGGGCCTGTaGCCCTGTGCCCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPAVVGL*PCAPEL
Trigger: AAGTTCAGGGGCACAGGGGCACAGGCCCACGACTGC...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGCAGTCGTGGGCCTGTaGCCCTGTGCCCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQAVVGL*PCAPEL
Trigger: AAGTTCAGGGGCACAGGGGCACAGGCCCACGACTGC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACACTGGTCCATCCCGCTaGAGTCGTGGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHTGPSR*SRGPVP
Trigger: GGGCACAGGCCCACGACTGCAGCGGGATGGACCAGT...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTACTGGTCCATCCCGCTaGAGTCGTGGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCTGPSR*SRGPVP
Trigger: GGGCACAGGCCCACGACTGCAGCGGGATGGACCAGT...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRMKGRISSGFNSDSSRISRRA*LGKPSS
Trigger: GGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGAT...TCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGCTCTTGACCTGTGCCTaGGCTAGTGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQLLTCA*ASGLWA
Trigger: TGCCCAGAGGCCACTAGCCCAGGCACAGGTCAAGAG...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSEAAAV*GKDSSQ
Trigger: CTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTC...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTGCAGCCCACAGACCTaGTGGCCACCTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQCSPQT*WPPGVC
Trigger: ACACACACCAGGTGGCCACCAGGTCTGTGGGCTGCA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCACGCCCTGGTCATACTaGCGGGCACCATACAGGAGC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSTPWSY*RAPYRS
Trigger: GCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGT...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325303.9
CDS-3UTR TCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCCACCCCACGCTGATCTaGGCTCGCACGCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSHPTLI*ARTLLP
Trigger: AGGCAACAGCGTGCGAGCTCAGATCAGCGTGGGGTG...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR TCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLPDPTA*TQRPAQ
Trigger: TTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGG...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGTCTGCAGGTAGCTCTTaGCCTGTGCCTGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWSAGSS*PVPGLV
Trigger: CACTAGCCCAGGCACAGGTCAAGAGCTACCTGCAGA...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCAGCTCCGGCCAGACTTaGGGGTTTGGGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSSSGQT*GFGVPK
Trigger: CTTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCT...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTAGTCCGGCAGCTCAGTaGGCTCCGGCCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCSPAAQ*APARLE
Trigger: CTCAAGTCTGGCCGGAGCTCACTGAGCTGCCGGACT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCGGTCCCCCTAGACGCTaGGGAATCGGCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPGPPRR*GIGSSD
Trigger: ATCTGAGCTGCCGATTCCTCAGCGTCTAGGGGGACC...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSGKQHQGRHRHSAYAGLLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...AAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTGGACTGAGTGGTCCTaGGGAGCAGGCAGACGGGAC +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCWTEWS*GAGRRD
Trigger: GTCCCGTCTGCCTGCTCCTCAGGACCACTCAGTCCA...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGACTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PSRMKGRISSGFNSDSSRLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...TCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR GCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCGCAGTCGTGGGCCTGTaGCCCTGTGCCCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSAVVGL*PCAPEL
Trigger: AAGTTCAGGGGCACAGGGGCACAGGCCCACGACTGC...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACGATGCGGCCCAGGATaGAGTACTGGTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSRCGPG*STGPSR
Trigger: GCGGGATGGACCAGTACTGCATCCTGGGCCGCATCG...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCGATGCGGCCCAGGATaGAGTACTGGTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSRCGPG*STGPSR
Trigger: GCGGGATGGACCAGTACTGCATCCTGGGCCGCATCG...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGATAGAAGGCAGACACTaGCAGCCCACCCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQIEGRH*QPTLGS
Trigger: GGAGCCGAGGGTGGGCTGGCAGTGTCTGCCTTCTAT...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336654.9
CDS-3UTR GCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSVCRGG*RLGKRL
Trigger: GAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACAC...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGAGGGGCATGGGCACCTaGTCCTTAAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLRGMGT*SLKEIL
Trigger: CAAGATCTCCTTTAAGGAGCAGGTGCCCATGCCCCT...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGCCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWPWKLR*AGEEGR
Trigger: TCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGG...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS-3UTR GCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGCCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLPRMQY*SIPLQS
Trigger: CGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPPRMQY*SIPLQS
Trigger: CGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTCCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HSGKQHQGRHRHSAYAGLPRMQY*SIPLQS
Trigger: CGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG...AAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCACCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPPRMQY*SIPLQS
Trigger: CGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSISRRA*LGKPSS
Trigger: GGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGAT...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHISRRA*LGKPSS
Trigger: GGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGAT...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCACTCTTGACCTGTGCCTaGGCTAGTGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPLLTCA*ASGLWA
Trigger: TGCCCAGAGGCCACTAGCCCAGGCACAGGTCAAGAG...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTCTCTTGACCTGTGCCTaGGCTAGTGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSGKQHQGRHRHSAYAGLLLTCA*ASGLWA
Trigger: TGCCCAGAGGCCACTAGCCCAGGCACAGGTCAAGAG...AAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCEAAAV*GKDSSQ
Trigger: CTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTC...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAAGCCCACAGACCTGGTaGCCACCTGGTGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPSPQTW*PPGVCR
Trigger: TCTACACACACCAGGTGGCCACCAGGTCTGTGGGCT...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGATGGAGGAGAGCCTTaGAAGCTGCGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQDGGEP*KLRCAG
Trigger: ACCAGCGCATCGCAGCTTCCAAGGCTCTCCTCCATC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGCCCTGGATGGGCCTTaGGGGCAGGTCCCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDALDGP*GQVPLD
Trigger: GTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGC...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGCAGGGTGTGGTGTaGGCCCACTGTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDGQGVV*AHCGHG
Trigger: CCCATGGCCACAGTGGGCCCACACCACACCCTGCCC...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAGGCAGCTCAGATGGATaGGCAGGCAGGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSGSSDG*AGRGAW
Trigger: CCAAGCTCCCCTGCCTGCCCATCCATCTGAGCTGCC...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR TCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPLGPPS*GQLSRQ
Trigger: CTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAA...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATCTGCAGGTAGCTCTTaGCCTGTGCCTGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPSAGSS*PVPGLV
Trigger: CACTAGCCCAGGCACAGGTCAAGAGCTACCTGCAGA...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTATCTTGAGCTGGCCTaGGGCGCTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQYLELA*GADEQV
Trigger: AACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGATGTGGTATCTTGAGCTGGCCTaGGGCGCTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GFNSDSSRGRSTWKSWMWYLELA*GADEQV
Trigger: AACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATA...CCACATCCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCACAGGCAGGGGAGCTGTaGAGAAGTACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPQAGEL*RSTDGG
Trigger: TCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTG...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTGGTCCCCCTAGACGCTaGGGAATCGGCAGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCGPPRR*GIGSSD
Trigger: ATCTGAGCTGCCGATTCCTCAGCGTCTAGGGGGACC...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTGAGGAACAGGTGGACTaGGTGGTCCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSEEQVD*VVLRSR
Trigger: CCTGCTCCTCAGGACCACTCAGTCCACCTGTTCCTC...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCTGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGCAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGGGGCGCCCTCCCCGATaGGGCCCAGGATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQGRPPR*GPGCST
Trigger: AGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCC...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGACCCTCGGCTCCACGTaGTTGGCCTTGAAGACGATG +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQTLGST*LALKTM
Trigger: CATCGTCTTCAAGGCCAAGCACGTGGAGCCGAGGGT...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336654.9
CDS-3UTR GCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTC +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPVCRGG*RLGKRL
Trigger: GAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACAC...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTC +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSVCRGG*RLGKRL
Trigger: GAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACAC...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTC +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQVCRGG*RLGKRL
Trigger: GAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACAC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAACCCAGCAGATCCAATaGCTGGGGAGAGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPTQQIQ*LGRDVR
Trigger: CCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGT...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCACCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPPWKLR*AGEEGR
Trigger: TCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGG...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTGAGAGCCTTGGAAGCTaGGATGCGCTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSESLGS*DALVRR
Trigger: CCTCCTCACCAGCGCATCGCAGCTTCCAAGGCTCTC...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCGAGAGCCTTGGAAGCTaGGATGCGCTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSESLGS*DALVRR
Trigger: CCTCCTCACCAGCGCATCGCAGCTTCCAAGGCTCTC...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGGGCCAACTTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAAGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RANFSPLQDEGPNQLWVQGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...TTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAAGTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR GCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCGCCAGTCTCCACGTaGTTGGCCTTGAAGACGATG +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPSPVST*LALKTM
Trigger: CATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGA...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATGCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHAWKLR*AGEEGR
Trigger: TCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGC...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR CCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATTGGGCTAGTGGCCTCTaGGCATGGCGCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDWASGL*AWRTTS
Trigger: CGAGGTGGTGCGCCATGCCCAGAGGCCACTAGCCCA...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCCGCTATCTTGAGCTaGCCTGAGGCGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSSAILS*PEALMS
Trigger: GCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGA...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCTCCGCTATCTTGAGCTaGCCTGAGGCGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPSAILS*PEALMS
Trigger: GCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGA...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCGCTATCTTGAGCTaGCCTGAGGCGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLSAILS*PEALMS
Trigger: GCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGA...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTAGCCCACAGACCTGGTaGCCACCTGGTGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HSGKQHQGRHRHSAYAGLSPQTW*PPGVCR
Trigger: TCTACACACACCAGGTGGCCACCAGGTCTGTGGGCT...AAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGAGCAGATCCAATGCCTaGGGAGAGACGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLSRSNA*GETSGS
Trigger: GCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCT...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCAGCAGATCCAATGCCTaGGGAGAGACGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPSRSNA*GETSGS
Trigger: GCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCT...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGGGCCAACTTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAAAGCAGATCCAATGCCTaGGGAGAGACGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RANFSPLQDEGPNQLWVQSRSNA*GETSGS
Trigger: GCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCT...TTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAAGTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTAGAGGCCGGTCCACGTaGAAGTCATGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSRGRST*KSWMWG
Trigger: CCCCCACATCCATGACTTCCACGTGGACCGGCCTCT...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGGTGAAGCCAGGCAGGTaGCAGAGGAACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLVKPGR*QRNRWT
Trigger: AGTCCACCTGTTCCTCTGCCACCTGCCTGGCTTCAC...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGCCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCAGAGGGTCTCCTGCTaGATCCCCAACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLQRVSC*IPNWSH
Trigger: ATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTG...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATAGCTCAGTGAGCTCCTaGTGGCCACCTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHSSVSS*WPPGVC
Trigger: ACACACACCAGGTGGCCACCAGGAGCTCACTGAGCT...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS-3UTR TCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTACAACAGCGCGGCAGCTaGCCACTGGGGCGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVQQRGS*PLGRFL
Trigger: CAGGAACCGCCCCAGTGGTCAGCTGCCGCGCTGTTG...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR TCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATCACCCCACGCTGATCTaGGCTCGCACGCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDHPTLI*ARTLLP
Trigger: AGGCAACAGCGTGCGAGCTCAGATCAGCGTGGGGTG...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR TCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLLGPPS*GQLSRQ
Trigger: CTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAA...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTTCTGCAGGTAGCTCTTaGCCTGTGCCTGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSSAGSS*PVPGLV
Trigger: CACTAGCCCAGGCACAGGTCAAGAGCTACCTGCAGA...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTTCTGCAGGTAGCTCTTaGCCTGTGCCTGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCSAGSS*PVPGLV
Trigger: CACTAGCCCAGGCACAGGTCAAGAGCTACCTGCAGA...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGACTGGTCCATCCCGCTaGAGTCGTGGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQTGPSR*SRGPVP
Trigger: GGGCACAGGCCCACGACTGCAGCGGGATGGACCAGT...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAAGGGGCATGGGCACCTaGTCCTTAAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPRGMGT*SLKEIL
Trigger: CAAGATCTCCTTTAAGGAGCAGGTGCCCATGCCCCT...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTACCCAGCAGATCCAATaGCTGGGGAGAGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCTQQIQ*LGRDVR
Trigger: CCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: AGIVILHMQALTGSRAHCWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCAGTGGCTATGCCTGGTaGTACCCTCCCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETSGYAW*YPPHDP
Trigger: GGGGTCATGGGGAGGGTAGCACCAGGCATAGCCACT...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAGGGCAAAAGTGGCTATaGCTGGTGCTACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSGQKWL*LVLPSP
Trigger: TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCC...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCATCGCCAGTCTCCACGTaGTTGGCCTTGAAGACGATG +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPSPVST*LALKTM
Trigger: CATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGA...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGTGGGCTAGTGGCCTCTaGGCATGGCGCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQWASGL*AWRTTS
Trigger: CGAGGTGGTGCGCCATGCCCAGAGGCCACTAGCCCA...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACCTCTTGACCTGTGCCTaGGCTAGTGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYLLTCA*ASGLWA
Trigger: TGCCCAGAGGCCACTAGCCCAGGCACAGGTCAAGAG...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTTCCGCTATCTTGAGCTaGCCTGAGGCGCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSSAILS*PEALMS
Trigger: GCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGA...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAAGCCCACAGACCTGGTaGCCACCTGGTGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSSPQTW*PPGVCR
Trigger: TCTACACACACCAGGTGGCCACCAGGTCTGTGGGCT...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAG +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHPDLRV*GAQDAK
Trigger: CTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGG...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTAGCAGATCCAATGCCTaGGGAGAGACGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCSRSNA*GETSGS
Trigger: GCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGCTAAGGGGCAGGGTGTaGTGTGGGCCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQLRGRV*CGPTVA
Trigger: GGCCACAGTGGGCCCACACCACACCCTGCCCCTTAG...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGCAACAGCGCGGCAGCTaGCCACTGGGGCGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQQQRGS*PLGRFL
Trigger: CAGGAACCGCCCCAGTGGTCAGCTGCCGCGCTGTTG...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR TCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTTTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSLGPPS*GQLSRQ
Trigger: CTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAA...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCACCAGATCCGACAGCATaGACTCAAAGGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPPDPTA*TQRPAQ
Trigger: TTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGG...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTATCTTGAGCTGGCCTaGGGCGCTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSYLELA*GADEQV
Trigger: AACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATA...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGAGTCCGGCAGCTCAGTaGGCTCCGGCCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQSPAAQ*APARLE
Trigger: CTCAAGTCTGGCCGGAGCTCACTGAGCTGCCGGACT...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCTGTGAAGAAGTACTaGTGGAGGAGAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQAVKKY*WRRALE
Trigger: TTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCAGGCAGGGGAGCTGTaGAGAAGTACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSQAGEL*RSTDGG
Trigger: TCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTG...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATCTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACTCTTGGCTGGGAACATaGCCTCTGCCTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHSWLGT*PLPRDQ
Trigger: TTGGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGA...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGTCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCCTTGAGGGTTTGGGGTaGCCAAGATGCGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSLEGLG*PRCEAH
Trigger: ATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAG...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGCTTGAGGGTTTGGGGTaGCCAAGATGCGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQLEGLG*PRCEAH
Trigger: ATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAG...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCAGGGGCATGGGCACCTaGTCCTTAAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPRGMGT*SLKEIL
Trigger: CAAGATCTCCTTTAAGGAGCAGGTGCCCATGCCCCT...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACAGAGAGCCTTGGAAGCTaGGATGCGCTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTESLGS*DALVRR
Trigger: CCTCCTCACCAGCGCATCGCAGCTTCCAAGGCTCTC...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACAGTGCAGAGGGTCTCCTaGTGGATCCCCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTVQRVS*WIPNWS
Trigger: GCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCAC...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCATCGCCAGTCTCCACGTaGTTGGCCTTGAAGACGATG +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSSPVST*LALKTM
Trigger: CATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGA...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSKASTV*EHSLQL
Trigger: CAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTT...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLKASTV*EHSLQL
Trigger: CAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTT...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: PSRMKGRISSGFNSDSSRKASTV*EHSLQL
Trigger: CAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTT...TCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAACAATGTTGTTGGCATaGCAGAAGGCGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPTMLLA*QKATPL
Trigger: CAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGT...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCATGCAGCCCACAGACCTaGTGGCCACCTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPCSPQT*WPPGVC
Trigger: ACACACACCAGGTGGCCACCAGGTCTGTGGGCTGCA...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACCAGAGGGTCTCCTGCTaGATCCCCAACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYQRVSC*IPNWSH
Trigger: ATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTG...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCAAGTTGTACCACATACTaGTTGTCCTCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VHRSPSGQKWLCLVLPSPSCTTY*LSSISC
Trigger: GCAGGAGATGGAGGACAATCAGTATGTGGTACAACT...TGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGAGTTGTACCACATACTaGTTGTCCTCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSGFNSDSSRGRSTWKSWSCTTY*LSSISC
Trigger: GCAGGAGATGGAGGACAATCAGTATGTGGTACAACT...CCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHPDPTA*TQRPAQ
Trigger: TTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGG...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCPDPTA*TQRPAQ
Trigger: TTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGG...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGCTGTGAAGAAGTACTaGTGGAGGAGAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQAVKKY*WRRALE
Trigger: TTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCAACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGAGCTCGCACGCTGTTaGCTAGCAACAGCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVELARC*LATARQ
Trigger: CTGCCGCGCTGTTGCTAGGCAACAGCGTGCGAGCTC...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR GCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTACGATGCGGCCCAGGATaGAGTACTGGTCCATCCCGC +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVRCGPG*STGPSR
Trigger: GCGGGATGGACCAGTACTGCATCCTGGGCCGCATCG...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACTTGTCCTCCATCTCCTaGAGAGCCTTAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHLSSIS*RALISR
Trigger: GCGGGAGATTAAGGCTCTGCAGGAGATGGAGGACAA...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCAGGGGCATGGGCACCTaGTCCTTAAAGGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: RHRHSAYAGLDWQQSSLSRGMGT*SLKEIL
Trigger: CAAGATCTCCTTTAAGGAGCAGGTGCCCATGCCCCT...GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATACCCAGCAGATCCAATaGCTGGGGAGAGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDTQQIQ*LGRDVR
Trigger: CCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGT...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCACCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPPWKLR*AGEEGR
Trigger: TCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGG...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATTGGGAACATGACCTCTaGCTCGAGACCAACCCTCGC +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDWEHDL*LETNPR
Trigger: GCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCCA...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCAGATGGAGGAGAGCCTTaGAAGCTGCGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPDGGEP*KLRCAG
Trigger: ACCAGCGCATCGCAGCTTCCAAGGCTCTCCTCCATC...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACAGATGGAGGAGAGCCTTaGAAGCTGCGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTDGGEP*KLRCAG
Trigger: ACCAGCGCATCGCAGCTTCCAAGGCTCTCCTCCATC...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACAGGGCCGAATCAGCTCTaGGTTCAACAGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTGPNQL*VQQRLL
Trigger: GAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCC...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGTCCTCCACCCCACGCTaGTCTGAGCTCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQSSTPR*SELARC
Trigger: ACAGCGTGCGAGCTCAGATCAGCGTGGGGTGGAGGA...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000375883.7
CDS-3UTR TCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGTCTGCAGGTAGCTCTTaGCCTGTGCCTGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQSAGSS*PVPGLV
Trigger: CACTAGCCCAGGCACAGGTCAAGAGCTACCTGCAGA...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTACTCACCCCTCCAGGATaGAGGGCCGAATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVLTPPG*RAESAL
Trigger: CAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAG...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCATGCATATGCAGGCCTTaGCTGGCAGCAGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPCICRP*LAAELT
Trigger: AGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCA...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAACCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCTCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: KPASCAEGLLLDPQLEPSSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...GGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTACTGGTCCATCCCGCTaGAGTCGTGGGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLTGPSR*SRGPVP
Trigger: GGGCACAGGCCCACGACTGCAGCGGGATGGACCAGT...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTGGGCTAGTGGCCTCTaGGCATGGCGCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: SPSIISSSASGSTSFHVSWASGL*AWRTTS
Trigger: CGAGGTGGTGCGCCATGCCCAGAGGCCACTAGCCCA...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTACTCTTGACCTGTGCCTaGGCTAGTGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVLLTCA*ASGLWA
Trigger: TGCCCAGAGGCCACTAGCCCAGGCACAGGTCAAGAG...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCACCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAG +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPPDLRV*GAQDAK
Trigger: CTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGG...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACACCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAG +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTPDLRV*GAQDAK
Trigger: CTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGG...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCTCTCCTCTGCTCGACTaGATGTTCTCATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLSPLLD*MFSYSW
Trigger: CCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGA...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGAAAAAGCACTAGCTaGGATTATATTGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMGKSTS*DYIGIY
Trigger: ATAAATCCCAATATAATCCCAGCTAGTGCTTTTTCC...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCGCTGTGAAGAAGTACTaGTGGAGGAGAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETAVKKY*WRRALE
Trigger: TTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGC...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAACCGAGCACAGGCCATaGATCTCCTCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVTEHRP*ISSARL
Trigger: CAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGT...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTCTCTGCACTTCTCCTTaGCCAGGAGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCLCTSP*PGGSTR
Trigger: CCGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAG...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACACTATCTCGCCAGTCTaGAGGATAGAAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYTISPV*RIEGRH
Trigger: GTGTCTGCCTTCTATCCTGCAGACTGGCGAGATAGT...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336654.9
CDS-3UTR GCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATTTGTCCTCCATCTCCTaGAGAGCCTTAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDLSSIS*RALISR
Trigger: GCGGGAGATTAAGGCTCTGCAGGAGATGGAGGACAA...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATTGTCCTCCATCTCCTaGAGAGCCTTAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTLSSIS*RALISR
Trigger: GCGGGAGATTAAGGCTCTGCAGGAGATGGAGGACAA...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACACTTGAGGGTTTGGGGTaGCCAAGATGCGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTLEGLG*PRCEAH
Trigger: ATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAG...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGCATCATTTCCTCTTCTaGATCTGGTTCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQHHFLF*IWFHFL
Trigger: AAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATG...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTCCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCPRMQY*SIPLQS
Trigger: CGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACAAAAAGTGGCTATGCCTaGTGCTACCCTCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTKSGYA*CYPPHD
Trigger: GTCATGGGGAGGGTAGCACCAGGCATAGCCACTTTT...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACAGTTGTACCACATACTaGTTGTCCTCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYSCTTY*LSSISC
Trigger: GCAGGAGATGGAGGACAATCAGTATGTGGTACAACT...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACACAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACTCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATACAATGTTGTTGGCATaGCAGAAGGCGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDTMLLA*QKATPL
Trigger: CAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGT...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTACCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAG +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVPDLRV*GAQDAK
Trigger: CTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGG...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCATCTCATACTCTTGGCTaGGAACATGACCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPSHTLG*EHDLCL
Trigger: GAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGA...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGCCCTCAGGGCAAAAGTaGCTATGCCTGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQPSGQK*LCLVLP
Trigger: GGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGG...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGGAAAAAGCACTAGCTaGGATTATATTGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: GNMTSASRPTLARAKGQGGKSTS*DYIGIY
Trigger: ATAAATCCCAATATAATCCCAGCTAGTGCTTTTTCC...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATAGTTGTACCACATACTaGTTGTCCTCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDSCTTY*LSSISC
Trigger: GCAGGAGATGGAGGACAATCAGTATGTGGTACAACT...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 4 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 4 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTATTGTCCTCCATCTCCTaGAGAGCCTTAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVLSSIS*RALISR
Trigger: GCGGGAGATTAAGGCTCTGCAGGAGATGGAGGACAA...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTC +
Preference number: 4 (lower is better)
Translates to: SPSIISSSASGSTSFHVSVCRGG*RLGKRL
Trigger: GAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACAC...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTCCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLPWKLR*AGEEGR
Trigger: TCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGG...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IVILHMQALTGSRAHCPDAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGACAATGTTGTTGGCATaGCAGAAGGCGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQTMLLA*QKATPL
Trigger: CAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGT...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTGATGGAGGAGAGCCTTaGAAGCTGCGATGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPSIISSSASGSTSFHVSDGGEP*KLRCAG
Trigger: ACCAGCGCATCGCAGCTTCCAAGGCTCTCCTCCATC...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGTATGCAGGCCTTGACTaGCAGCAGAGCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQYAGLD*QQSSLS
Trigger: GGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATA...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCAAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 4 (lower is better)
Translates to: QGRHRHSAYAGLDWQQSSNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...TGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp GGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCATACTCTTGGCTGGGAACATCCCTCACTTCTAAATaGGTGCTCAGTGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: GHESPLLDWMFSYSWLGTSLTSK*VLSDVK
Trigger: CTTCACATCACTGAGCACTCATTTAGAAGTGAGGGA...TGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR GCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAGGGCGCCCTCCCCGATaGGGCCCAGGATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKGRPPR*GPGCST
Trigger: AGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCC...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTCTTGAGGGTTTGGGGTaGCCAAGATGCGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCLEGLG*PRCEAH
Trigger: ATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAG...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
CDS-3UTR GCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCCATCATTTCCTCTTCTaGATCTGGTTCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETHHFLF*IWFHFL
Trigger: AAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATG...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTCAGTGAGCTCCTGGTaGCCACCTGGTGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLSVSSW*PPGVCR
Trigger: TCTACACACACCAGGTGGCCACCAGGAGCTCACTGA...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS-3UTR TCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTGCTGTGAAGAAGTACTaGTGGAGGAGAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCAVKKY*WRRALE
Trigger: TTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGC...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCAATCTTCCTTCCACTTaGGTTTCCAACATAAGGACA +
Preference number: 4 (lower is better)
Translates to: STGCSHTLGWEHDLCLETNLPST*VSNIRT
Trigger: TGTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATT...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR TCA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGCAAAAACGAGAGCCATaGGACAATGCCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQQKREP*DNATLA
Trigger: GGCTAAGGTGGCATTGTCTCATGGCTCTCGTTTTTG...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CCA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLKASTV*EHSLQL
Trigger: CAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTT...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCGGAAAAAGCACTAGCTaGGATTATATTGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSGKSTS*DYIGIY
Trigger: ATAAATCCCAATATAATCCCAGCTAGTGCTTTTTCC...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CCA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTGGAAAAAGCACTAGCTaGGATTATATTGGGATTTAT +
Preference number: 4 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCGKSTS*DYIGIY
Trigger: ATAAATCCCAATATAATCCCAGCTAGTGCTTTTTCC...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp CGTAAGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTCATCATTTCCTCTTCTaGATCTGGTTCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RKSFHHFLFCIWFHFLPCHHFLF*IWFHFL
Trigger: AAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATG...ACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAATATCTTGAGCTGGCCTaGGGCGCTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKYLELA*GADEQV
Trigger: AACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATA...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAATTGTCCTCCATCTCCTaGAGAGCCTTAATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKLSSIS*RALISR
Trigger: GCGGGAGATTAAGGCTCTGCAGGAGATGGAGGACAA...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR TCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAAGTTGTACCACATACTaGTTGTCCTCCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKSCTTY*LSSISC
Trigger: GCAGGAGATGGAGGACAATCAGTATGTGGTACAACT...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR GCA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAGCCATGAATCTCCTCTaGTCGACTGGATGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKAMNLL*STGCSH
Trigger: ATGAGAACATCCAGTCGAGCAGAGGAGATTCATGGC...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CAA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGPKSAI*SWPEAL
Trigger: CAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGG...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS CCA 90 bp GACCACCCACAGGGGTCTCACCACAGATCGACGCCCTGGTCATACTaGCGGGCACCATACAGGAGCTCGGGGGCTCGGTACCACCTGCGA +
Preference number: 5 (lower is better)
Translates to: DHPQGSHHRSTPWSY*RAPYRSSGARYHLR
Trigger: TCGCAGGTGGTACCGAGCCCCCGAGCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTGGTGAGACCCCTGTGGGTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459720.5
ENST00000603475.1
ENST00000604175.5
CDS-3UTR CAA 90 bp ACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: TLARAKGQGVVWAHCGHGPKSAI*SWPEAL
Trigger: CAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGG...CCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGGCCCTGGATGGGCCTaGGGGGCAGGTCCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQGPGWA*GAGPPR
Trigger: TCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGCC...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCTCTCTGCACTTCTCCTaGACCAGGAGGCAGCACTCG +
Preference number: 5 (lower is better)
Translates to: LPRDQPSQGLRGRVWCGPSLHFS*TRRQHS
Trigger: CGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAGA...GGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS GCA 90 bp CTGGCCCTCCCTACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCT +
Preference number: 5 (lower is better)
Translates to: LALPTWWPPGVCRGG*RLGKRLEPGQSPLS
Trigger: AGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTAGGGAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS GCA 90 bp CAGAAACCTGCACTCCCGGACACGCGCTCTCCTGAGAGTTGGGCATaGCCCTCGTATGGGCCACCCTCAGGGGAAGTCTGGGGATGTCCA +
Preference number: 5 (lower is better)
Translates to: QKPALPDTRSPESWA*PSYGPPSGEVWGCP
Trigger: TGGACATCCCCAGACTTCCCCTGAGGGTGGCCCATACGAGGGGCATGCCCAACTCTCAGGAGAGCGCGTGTCCGGGAGTGCAGGTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTTCCACGTGCTTGGCCTaGAAGACGATGCCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GNMTSASRPTLARAKGQGSTCLA*KTMPWA
Trigger: CGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGA...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGCTCGGCTCCACGTGCTaGGCCTTGAAGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGLGSTC*ALKTMP
Trigger: CGGCATCGTCTTCAAGGCCAAGCACGTGGAGCCGAG...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336654.9
CDS-3UTR CAA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGGCCCTGGATGGGCCTaGGGGGCAGGTCCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQGPGWA*GAGPPR
Trigger: TCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGCC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GTGGCCTCTGGGCATGGCGCACCACCTCGGCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAAAGCCTCCACCGTGTGGGAACACAG +
Preference number: 5 (lower is better)
Translates to: VASGHGAPPRPDPTA*TQRPAQSLHRVGTQ
Trigger: CTGTGTTCCCACACGGTGGAGGCTTTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGGCCGAGGTGGTGCGCCATGCCCAGAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS GCA 90 bp AGGGGACAGGGACCCCTGAGAGACACCCTGACACCTGTCAGCCCATaGTCCTGTGGTCATCGTCCTCCCAGGCCTACCAGCCATAACCAG +
Preference number: 5 (lower is better)
Translates to: RGQGPLRDTLTPVSP*SCGHRPPRPTSHNQ
Trigger: CTGGTTATGGCTGGTAGGCCTGGGAGGACGATGACCACAGGAGCATGGGCTGACAGGTGTCAGGGTGTCTCTCAGGGGTCCCTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 90 bp TTACCCTTTGACCACCCACAGGGGTCTCACCACAGATCGACGCCCTaGTCATACTGGCGGGCACCATACAGGAGCTCGGGGGCTCGGTAC +
Preference number: 5 (lower is better)
Translates to: LPFDHPQGSHHRSTP*SYWRAPYRSSGARY
Trigger: GTACCGAGCCCCCGAGCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTGGTGAGACCCCTGTGGGTGGTCAAAGGGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459720.5
ENST00000603475.1
ENST00000604175.5
CDS-3UTR CAA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMLRATF*RATISP
Trigger: TGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAG...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGCGCTGATGAGCAGGTaGGCAGGTTTCAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLALMSR*AGFRSR
Trigger: TCGGGACCTGAAACCTGCCAACCTGCTCATCAGCGC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTGGCCCTGGATGGGCCTaGGGGGCAGGTCCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: AGIVILHMQALTGSRAHCGPGWA*GAGPPR
Trigger: TCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGCC...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACGGCCCTGGATGGGCCTaGGGGGCAGGTCCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHGPGWA*GAGPPR
Trigger: TCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGCC...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGGCCAGTCTCCACGTGCTaGGCCTTGAAGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: SLMCRGSPAGSPTGAIPGPVSTC*ALKTMP
Trigger: CGGCATCGTCTTCAAGGCCAAGCACGTGGAGACTGG...CCCAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AAGTACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCGGCAGGCAGGGGAGCTaGGAAGCTGCGATGCGCTGG +
Preference number: 5 (lower is better)
Translates to: KYTGVPQGKSGYAWCYPPGRQGS*EAAMRW
Trigger: CCAGCGCATCGCAGCTTCCAAGCTCCCCTGCCTGCC...GGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS TCA 90 bp CCCCTGAACTTCCAAACTCCACTTCTCCTCCACCCCACGCTGATCTaGGCTCGCACGCTGTTGCCTAGCAACAGCGCGGCAGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: PLNFQTPLLLHPTLI*ARTLLPSNSAAADH
Trigger: GTGGTCAGCTGCCGCGCTGTTGCTAGGCAACAGCGTGCGAGCTCAGATCAGCGTGGGGTGGAGGAGAAGTGGAGTTTGGAAGTTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
CDS GCA 90 bp AGCTCAGTGAGCTCCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCT +
Preference number: 5 (lower is better)
Translates to: SSVSSWWPPGVCRGG*RLGKRLEPGQSPLS
Trigger: AGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGAGCTCACTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS CCA 90 bp CACAGACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: HRPGGHLVCVEAAAV*GKDSSQAKVRYLEL
Trigger: CAGCTCAAGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS CCA 90 bp GTACCACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: VPPGGHLVCVEAAAV*GKDSSQAKVRYLEL
Trigger: CAGCTCAAGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325303.9
CDS CCA 90 bp TCCCTACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLPGGHLVCVEAAAV*GKDSSQAKVRYLEL
Trigger: CAGCTCAAGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 90 bp AGGCCCAGAAGCATCTCTTCCCCATGGAGAAGACTGGAAGGGATCTaGCCCTCCCTACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RPRSISSPWRRLEGI*PSLPGGHLVCVEAA
Trigger: AGCCGCCTCTACACACACCAGGTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCTTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS-3UTR CAA 90 bp GGGAACATGACCTCTGCCTCGAGACCAACCCTCGCAAGGGCTAAGGGGCAGGGTGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAA +
Preference number: 5 (lower is better)
Translates to: GNMTSASRPTLARAKGQGARLEG*GCPRCE
Trigger: TTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGC...ACCCTGCCCCTTAGCCCTTGCGAGGGTTGGTCTCGAGGCAGAGGTCATGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGGGGGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 5 (lower is better)
Translates to: PSQGLRGRVWCGPTVAMGDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...CCCCATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS GCA 90 bp AACCGCCTTAGGGCCACCTTCTTGAGGGCAACTATCTCGCCAGTCTaGAGGATAGAAGGCAGACACTGCCAGCCCACCCTCGGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: NRLRATFLRATISPV*RIEGRHCQPTLGWE
Trigger: TTCCCAGCCGAGGGTGGGCTGGCAGTGTCTGCCTTCTATCCTGCAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGCGATGTACAATGTTGTaGGCATGGCAGAAGGCGACA +
Preference number: 5 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMRCTML*AWQKAT
Trigger: TGTCGCCTTCTGCCATGCCAACAACATTGTACATCG...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGGTTCAACAGCGACTCCTCAAGAGGCCGGTCCACGTGGAAGTCATGGATGTGGGCGCTGATGAGCAGGTaGGCAGGTTTCAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: GFNSDSSRGRSTWKSWMWALMSR*AGFRSR
Trigger: TCGGGACCTGAAACCTGCCAACCTGCTCATCAGCGC...CCACATCCATGACTTCCACGTGGACCGGCCTCTTGAGGAGTCGCTGTTGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CAA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATGAGCTCCGGCCAGACTaGAGGGTTTGGGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHELRPD*RVWGAQ
Trigger: TTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCTC...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGAGCTCCGGCCAGACTaGAGGGTTTGGGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: PSRMKGRISSGFNSDSSRELRPD*RVWGAQ
Trigger: TTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCTC...TCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS-3UTR CAA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCAGGCCCTGGATGGGCCTaGGGGGCAGGTCCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPGPGWA*GAGPPR
Trigger: TCTAGGGGGACCTGCCCCCAAGGCCCATCCAGGGCC...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GCTGAGGAATCGGCAGCTCAGATGGATGGGCAGGCAGGGGAGCTGTaGAGAAGTACTGATGGAGGAGAGCCTTGGAAGCTGCGATGCGCT +
Preference number: 5 (lower is better)
Translates to: AEESAAQMDGQAGEL*RSTDGGEPWKLRCA
Trigger: AGCGCATCGCAGCTTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTGCCCATCCATCTGAGCTGCCGATTCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
CDS TCA 90 bp AAGTCGGCCTTGCCTCTCTCCTGGGGCTCCCACAGCTGGAGAACATaGCCTCTTGTGACCTTTTGGACCTGGAGCTACCTCACCACCAGG +
Preference number: 5 (lower is better)
Translates to: KSALPLSWGSHSWRT*PLVTFWTWSYLTTR
Trigger: CCTGGTGGTGAGGTAGCTCCAGGTCCAAAAGGTCACAAGAGGTCATGTTCTCCAGCTGTGGGAGCCCCAGGAGAGAGGCAAGGCCGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 90 bp GTCTGGAGAAAAGGCCCAGAAGCATCTCTTCCCCATGGAGAAGACTaGAAGGGATCTGGCCCTCCCTACCTGGTGGCCACCTGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VWRKGPEASLPHGED*KGSGPPYLVATWCV
Trigger: CACACACCAGGTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCTTCTGGGCCTTTTCTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 90 bp GGGTCTACTCATGAGAGGCACACCTGCTCCAAGGCCCCTGTCCCCTaGGTTCCAGATGTCTGGTGCTGGTCCATGCCAATCACAGGTTCT +
Preference number: 5 (lower is better)
Translates to: GSTHERHTCSKAPVP*VPDVWCWSMPITGS
Trigger: AGAACCTGTGATTGGCATGGACCAGCACCAGACATCTGGAACCCAGGGGACAGGGGCCTTGGAGCAGGTGTGCCTCTCATGAGTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp CCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGCCAGCGCTGATGAGCAGGTaGGCAGGTTTCAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: PDGYVSSTQKVRLTEHRPALMSR*AGFRSR
Trigger: TCGGGACCTGAAACCTGCCAACCTGCTCATCAGCGC...TGGCCTGTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGTCTCTGCACTTCTCCTaGACCAGGAGGCAGCACTCG +
Preference number: 5 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQSLHFS*TRRQHS
Trigger: CGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAGA...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACGCGCTGATGAGCAGGTaGGCAGGTTTCAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHALMSR*AGFRSR
Trigger: TCGGGACCTGAAACCTGCCAACCTGCTCATCAGCGC...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSPKSAI*SWPEAL
Trigger: CAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGG...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAA +
Preference number: 5 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQARLEG*GCPRCE
Trigger: TTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGC...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GGGCTGGAGAGGAGTGAGCACAGGGCACAACAGCAGGCAGCGTCATaGGGTGATGGCACCCAAGCATACGACATCTGTGGGTCACAAAAA +
Preference number: 5 (lower is better)
Translates to: GLERSEHRAQQQAAS*GDGTQAYDICGSQK
Trigger: TTTTTGTGACCCACAGATGTCGTATGCTTGGGTGCCATCACCTCATGACGCTGCCTGCTGTTGTGCCCTGTGCTCACTCCTCTCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 90 bp AAGGAGCAGAGACTACAGCCTCTCCCCCTACCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGAGAAGGAATTGACCCAGCAGATCCA +
Preference number: 5 (lower is better)
Translates to: KEQRLQPLPLPWKLR*AGEEGREGIDPADP
Trigger: TGGATCTGCTGGGTCAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGGTAGGGGGAGAGGCTGTAGTCTCTGCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 90 bp TCCTCAAACATCTCATGCTTAAACCTGCCCTCCACCAGGAAGCTTTaGTTGACCCCAAAGTCGGCCTTGCCTCTCTCCTGGGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SSNISCLNLPSTRKL*LTPKSALPLSWGSH
Trigger: GTGGGAGCCCCAGGAGAGAGGCAAGGCCGACTTTGGGGTCAAGCAAAGCTTCCTGGTGGAGGGCAGGTTTAAGCATGAGATGTTTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 90 bp CACAAGCAATGTCTGGAGAAAAGGCCCAGAAGCATCTCTTCCCCATaGAGAAGACTGGAAGGGATCTGGCCCTCCCTACCTGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: HKQCLEKRPRSISSP*RRLEGIWPSLPGGH
Trigger: GTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCTTCTGGGCCTTTTCTCCAGACATTGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 90 bp CAGCTGTTCCAAGACTTCTCGGAGACTCCTGCTCTAGGACACTTCTaGGGCAGACCTGCAAACCTGCCCCAAATCTCAGACCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: QLFQDFSETPALGHF*GRPANLPQISDPWA
Trigger: TGCCCATGGGTCTGAGATTTGGGGCAGGTTTGCAGGTCTGCCCCAGAAGTGTCCTAGAGCAGGAGTCTCCGAGAAGTCTTGGAACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 90 bp AGCTGGCCTGAGGCGCTGATGAGCAGGTTGGCAGGTTTCAGGTCCTaGGAGTACCAAAAGAAGCATCAGTCCCTCCAAATCCCCCATAGG +
Preference number: 5 (lower is better)
Translates to: SWPEALMSRLAGFRS*EYQKKHQSLQIPHR
Trigger: CCTATGGGGGATTTGGAGGGACTGATGCTTCTTTTGGTACTCCCAGGACCTGAAACCTGCCAACCTGCTCATCAGCGCCTCAGGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603475.1
ENST00000604175.5
CDS-3UTR CAA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLLRATF*RATISP
Trigger: TGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAG...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGACTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: PSRMKGRISSGFNSDSSRLRATF*RATISP
Trigger: TGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAG...TCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CAA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAA +
Preference number: 5 (lower is better)
Translates to: AGIVILHMQALTGSRAHCARLEG*GCPRCE
Trigger: TTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGC...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CCAGCCTCATGTGCAGAGGGTCTCCTGCTGGATCCCCAACTGGAGCCATCCCTGGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 5 (lower is better)
Translates to: PASCAEGLLLDPQLEPSLDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...CAGGGATGGCTCCAGTTGGGGATCCAGCAGGAGACCCTCTGCACATGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GAAGGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTCTGCACTTCTCCTaGACCAGGAGGCAGCACTCG +
Preference number: 5 (lower is better)
Translates to: EGKAHRAQAMNLLCSTGCSLHFS*TRRQHS
Trigger: CGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAGA...ACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GCATACGACATCTGTGGGTCACAAAAAGGACCCTGGCTTTTCCTCTaGGATGGAGCCACAGGAGGGCCCTGGCAGAGAAGGAATGTGTCC +
Preference number: 5 (lower is better)
Translates to: AYDICGSQKGPWLFL*DGATGGPWQRRNVS
Trigger: GGACACATTCCTTCTCTGCCAGGGCCCTCCTGTGGCTCCATCTCAGAGGAAAAGCCAGGGTCCTTTTTGTGACCCACAGATGTCGTATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 90 bp AGACTTCTCGGAGACTCCTGCTCTAGGACACTTCTGGGGCAGACCTaGAAACCTGCCCCAAATCTCAGACCCATGGGCACTGCCAACTAT +
Preference number: 5 (lower is better)
Translates to: RLLGDSCSRTLLGQT*KPAPNLRPMGTANY
Trigger: ATAGTTGGCAGTGCCCATGGGTCTGAGATTTGGGGCAGGTTTGCAGGTCTGCCCCAGAAGTGTCCTAGAGCAGGAGTCTCCGAGAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS GCA 90 bp GGCCCCTACAAACCGGCCAGACTTGAGGGTTTGGGGTGCCCAAGATaGGAAGCACATAGCAAAGCTGTTCAATATCGTTCTTGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: GPYKPARLEGLGCPR*EAHSKAVQYRSCPG
Trigger: TCCCGGGCAAGAACGATATTGAACAGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 90 bp CCCACCTCACCAAGGGCCCCTACAAACCGGCCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAGCACATAGCAAAGCTGTTCAATATC +
Preference number: 5 (lower is better)
Translates to: PTSPRAPTNRPDLRV*GAQDAKHIAKLFNI
Trigger: GATATTGAACAGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGGTGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 90 bp CGACATCTGTGGGTCACAAAAAGGACCCTGGCTTTTCCTCTGAGATaGAGCCACAGGAGGGCCCTGGCAGAGAAGGAATGTGTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RHLWVTKRTLAFPLR*SHRRALAEKECVLF
Trigger: GAACAGGACACATTCCTTCTCTGCCAGGGCCCTCCTGTGGCTCCATCTCAGAGGAAAAGCCAGGGTCCTTTTTGTGACCCACAGATGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp GTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAGGCAGTCCACGTGCTTGGCCTaGAAGACGATGCCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: VSNIRTPYSLHFSLTRRQSTCLA*KTMPWA
Trigger: CGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGA...CTGCCTCCTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: AGIVILHMQALTGSRAHCLRATF*RATISP
Trigger: TGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAG...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGCGATGTACAATGTTGTaGGCATGGCAGAAGGCGACA +
Preference number: 5 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQRCTML*AWQKAT
Trigger: TGTCGCCTTCTGCCATGCCAACAACATTGTACATCG...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCCCGATGTACAATGTaGTTGGCATGGCAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HQGRHRHSAYAGLDWQQSSRCTM*LAWQKA
Trigger: CGCCTTCTGCCATGCCAACAACATTGTACATCGGGA...GCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGTCCCGATGTACAATGTaGTTGGCATGGCAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: QHQGRHRHSAYAGLDWQQSRCTM*LAWQKA
Trigger: CGCCTTCTGCCATGCCAACAACATTGTACATCGGGA...CTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: IVILHMQALTGSRAHCPDPKSAI*SWPEAL
Trigger: CAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGG...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGCAGCACTCGGGGAAGCAGCACCAAGGCAGGCATCGTCATTCTGCATATGCAGAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: GSTRGSSTKAGIVILHMQRVEKE*TQQIQC
Trigger: GCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCT...CTGCATATGCAGAATGACGATGCCTGCCTTGGTGCTGCTTCCCCGAGTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CAACCCTCGCAAGGGCTAAGGGGCAGGGTGTGGTGTGGGCCCACTGTGGCCATGAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 5 (lower is better)
Translates to: QPSQGLRGRVWCGPTVAMKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...CATGGCCACAGTGGGCCCACACCACACCCTGCCCCTTAGCCCTTGCGAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp ACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGATGTTGGTAAACCACCAGTCTCCACGTGCTaGGCCTTGAAGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: TQLLLAHAHPEGVDVGKPPVSTC*ALKTMP
Trigger: CGGCATCGTCTTCAAGGCCAAGCACGTGGAGACTGG...TGGTTTACCAACATCTACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GATGTCTGGTGCTGGTCCATGCCAATCACAGGTTCTGAGGGTCGCTaGTGTGATGGGGTCACATGGCTACCAAGTACAGAGTACCAGGGT +
Preference number: 5 (lower is better)
Translates to: DVWCWSMPITGSEGR*CDGVTWLPSTEYQG
Trigger: ACCCTGGTACTCTGTACTTGGTAGCCATGTGACCCCATCACATCAGCGACCCTCAGAACCTGTGATTGGCATGGACCAGCACCAGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 90 bp GCCAGGGAGAAGGAACAGGGTACAATGAGAGTAGTTCCCGACCCTTaGCATGCTCTCTGCTGTCAACTCTCAGCCCCTAACACACACTCA +
Preference number: 5 (lower is better)
Translates to: AREKEQGTMRVVPDP*HALCCQLSAPNTHS
Trigger: TGAGTGTGTGTTAGGGGCTGAGAGTTGACAGCAGAGAGCATGGCAAGGGTCGGGAACTACTCTCATTGTACCCTGTTCCTTCTCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS-3UTR CAA 90 bp AGGGCCAACTTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACGATGTACAATGTTGTaGGCATGGCAGAAGGCGACA +
Preference number: 5 (lower is better)
Translates to: RANFSPLQDEGPNQLWVQRCTML*AWQKAT
Trigger: TGTCGCCTTCTGCCATGCCAACAACATTGTACATCG...TTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAAGTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CAA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACTCCCGATGTACAATGTaGTTGGCATGGCAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHSRCTM*LAWQKA
Trigger: CGCCTTCTGCCATGCCAACAACATTGTACATCGGGA...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCCTCAAGAGGCCGGGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 5 (lower is better)
Translates to: RMKGRISSGFNSDSSRGRDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...CCGGCCTCTTGAGGAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CAA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATTCTCTGCACTTCTCCTaGACCAGGAGGCAGCACTCG +
Preference number: 5 (lower is better)
Translates to: IVILHMQALTGSRAHCPDSLHFS*TRRQHS
Trigger: CGAGTGCTGCCTCCTGGTCAAGGAGAAGTGCAGAGA...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp AGACCACCAAACAGCTCAGAGACCTCAGAGCCTAGCAGAAATCCATaGGCCATGTTACCCTTTGACCACCCACAGGGGTCTCACCACAGA +
Preference number: 5 (lower is better)
Translates to: RPPNSSETSEPSRNP*AMLPFDHPQGSHHR
Trigger: TCTGTGGTGAGACCCCTGTGGGTGGTCAAAGGGTAACATGGCTCATGGATTTCTGCTAGGCTCTGAGGTCTCTGAGCTGTTTGGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459720.5
ENST00000603475.1
ENST00000604175.5
CDS GCA 90 bp CTCACCAAGGGCCCCTACAAACCGGCCAGACTTGAGGGTTTGGGGTaGCCAAGATGCGAAGCACATAGCAAAGCTGTTCAATATCGTTCT +
Preference number: 5 (lower is better)
Translates to: LTKGPYKPARLEGLG*PRCEAHSKAVQYRS
Trigger: AGAACGATATTGAACAGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 90 bp CCAGGTGGAGAAGAGATTAAATGGGATGAGGGGAGACCCAGATTCTaGGAGGCAACCCAAGAGATAAGGGTCACACGGCTTGGGTACACT +
Preference number: 5 (lower is better)
Translates to: PGGEEIKWDEGRPRF*EATQEIRVTRLGYT
Trigger: AGTGTACCCAAGCCGTGTGACCCTTATCTCTTGGGTTGCCTCCCAGAATCTGGGTCTCCCCTCATCCCATTTAATCTCTTCTCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGTCCACGTGCTTGGCCTaGAAGACGATGCCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQSTCLA*KTMPWA
Trigger: CGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGA...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACTCCCGATGTACAATGTaGTTGGCATGGCAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYSRCTM*LAWQKA
Trigger: CGCCTTCTGCCATGCCAACAACATTGTACATCGGGA...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CACTGTCCTGATGGGTACGTCAGTAGCACACAGAAGGTAAGGCTCACCGAGCACAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: HCPDGYVSSTQKVRLTEHRVEKE*TQQIQC
Trigger: GCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCT...GTGCTCGGTGAGCCTTACCTTCTGTGTGCTACTGACGTACCCATCAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 5 (lower is better)
Translates to: GRHRHSAYAGLDWQQSSLDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...CAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS GCA 90 bp CTTGCCCTCTCAGATGACGACTCTGTGCACAGCTTGCTGAGACACTaGACATGTGTGTACTGGGGTGAAAAGGGACAAAGGACAGGATCT +
Preference number: 5 (lower is better)
Translates to: LALSDDDSVHSLLRH*TCVYWGEKGQRTGS
Trigger: AGATCCTGTCCTTTGTCCCTTTTCACCCCAGTACACACATGTGCAGTGTCTCAGCAAGCTGTGCACAGAGTCGTCATCTGAGAGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS-3UTR CAA 90 bp TACACAGGAGTCCCTCAGGGCAAAAGTGGCTATGCCTGGTGCTACCCTCCCCATGAACACAGCCTTCAGTaGTACCACATACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: YTGVPQGKSGYAWCYPPHEHSLQ*YHILIV
Trigger: GACAATCAGTATGTGGTACAACTGAAGGCTGTGTTC...ATGGGGAGGGTAGCACCAGGCATAGCCACTTTTGCCCTGAGGGACTCCTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQPKSAI*SWPEAL
Trigger: CAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGG...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTGAGCTCCGGCCAGACTaGAGGGTTTGGGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SPSIISSSASGSTSFHVSELRPD*RVWGAQ
Trigger: TTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCTC...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
CDS-3UTR CAA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: STGCSHTLGWEHDLCLETRVEKE*TQQIQC
Trigger: GCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCT...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GGTAAGGCTCACCGAGCACAGGCCATGAATCTCCTCTGCTCGACTGGATGTTCTGATGTTCTCATACTCTaGGCTGGGAACATGACCTCT +
Preference number: 5 (lower is better)
Translates to: GKAHRAQAMNLLCSTGCSDVLIL*AGNMTS
Trigger: AGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATC...AGAACATCCAGTCGAGCAGAGGAGATTCATGGCCTGTGCTCGGTGAGCCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS GCA 90 bp TGCCCCAAATCTCAGACCCATGGGCACTGCCAACTATCTTCTTGCTaGAAAACAAGCTCAGAGCTTTCATGTCCAAGGACACAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: CPKSQTHGHCQLSSC*KTSSELSCPRTQAS
Trigger: AGAGGCCTGTGTCCTTGGACATGAAAGCTCTGAGCTTGTTTTGCAGCAAGAAGATAGTTGGCAGTGCCCATGGGTCTGAGATTTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 90 bp ATCCGACAGCATGAACTCAAAGGCCAGCACAAAGCCTCCACCGTGTaGGAACACAGCCTTCAGTTGTACCACATACTGATTGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: IRQHELKGQHKASTV*EHSLQLYHILIVLH
Trigger: ATGGAGGACAATCAGTATGTGGTACAACTGAAGGCTGTGTTCCCACACGGTGGAGGCTTTGTGCTGGCCTTTGAGTTCATGCTGTCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS-3UTR CAA 90 bp GCAGGCATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTGAACACAGCCTTCAGTaGTACCACATACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: AGIVILHMQALTGSRAHCEHSLQ*YHILIV
Trigger: GACAATCAGTATGTGGTACAACTGAAGGCTGTGTTC...ACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGATGCCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp ATCGTCATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: IVILHMQALTGSRAHCPDRVEKE*TQQIQC
Trigger: GCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCT...ATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAATGACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTCCAGTCTCCACGTGCTaGGCCTTGAAGACGATGCCG +
Preference number: 5 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLPVSTC*ALKTMP
Trigger: CGGCATCGTCTTCAAGGCCAAGCACGTGGAGACTGG...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
CDS TCA 90 bp CTGCAAAACAAGCTCAGAGCTTTCATGTCCAAGGACACAGGCCTCTaGCCAGCTCAGAGATGCCATATCCTAGGATCTAACTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: LQNKLRAFMSKDTGL*PAQRCHILGSNSST
Trigger: TGTGCTGGAGTTAGATCCTAGGATATGGCATCTCTGAGCTGGTCAGAGGCCTGTGTCCTTGGACATGAAAGCTCTGAGCTTGTTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS-3UTR CAA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQLRATF*RATISP
Trigger: TGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAG...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp ATTCTGCATATGCAGGCCTTGACTGGCAGCAGAGCTCACTGTCCTGATGGGTACGAACACAGCCTTCAGTaGTACCACATACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: ILHMQALTGSRAHCPDGYEHSLQ*YHILIV
Trigger: GACAATCAGTATGTGGTACAACTGAAGGCTGTGTTC...GTACCCATCAGGACAGTGAGCTCTGCTGCCAGTCAAGGCCTGCATATGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp TTCTCACCCCTCCAGGATGAAGGGCCGAATCAGCTCTGGGTTCAACAGCGACTCAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 5 (lower is better)
Translates to: FSPLQDEGPNQLWVQQRLKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...GAGTCGCTGTTGAACCCAGAGCTGATTCGGCCCTTCATCCTGGAGGGGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375871.8
ENST00000605159.5
CDS-3UTR CAA 90 bp TCGACTGGATGTTCTCATACTCTTGGCTGGGAACATGACCTCTGCCTCGAGACCAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 5 (lower is better)
Translates to: STGCSHTLGWEHDLCLETKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...GGTCTCGAGGCAGAGGTCATGTTCCCAGCCAAGAGTATGAGAACATCCAGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS TCA 90 bp GAGGTTGCAGATCTGAAGAGTCATGAGGGAAGGCCATCTGAGAAGTaGCATTTAAGCCAAGACTTGAGACATAAGCAAGTGGGACATGAG +
Preference number: 5 (lower is better)
Translates to: EVADLKSHEGRPSEK*HLSQDLRHKQVGHE
Trigger: CTCATGTCCCACTTGCTTATGTCTCAAGTCTTGGCTTAAATGTCACTTCTCAGATGGCCTTCCCTCATGACTCTTCAGATCTGCAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS-3UTR CAA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAATCCACGTGCTTGGCCTaGAAGACGATGCCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKSTCLA*KTMPWA
Trigger: CGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGA...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CAA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAGAACACAGCCTTCAGTaGTACCACATACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVEHSLQ*YHILIV
Trigger: GACAATCAGTATGTGGTACAACTGAAGGCTGTGTTC...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp GTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTCGATGTACAATGTTGTaGGCATGGCAGAAGGCGACA +
Preference number: 5 (lower is better)
Translates to: VLPSFPLLHLVPLPSMYLRCTML*AWQKAT
Trigger: TGTCGCCTTCTGCCATGCCAACAACATTGTACATCG...AAGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CAA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAGAGCTCCGGCCAGACTaGAGGGTTTGGGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKELRPD*RVWGAQ
Trigger: TTGGGCACCCCAAACCCTCAAGTCTGGCCGGAGCTC...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
CDS-3UTR CAA 90 bp CACTTGAGTTTCCAACATAAGGACACCTTACTCTCTGCACTTCTCCTTGACCAGGAACACAGCCTTCAGTaGTACCACATACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: HLSFQHKDTLLSALLLDQEHSLQ*YHILIV
Trigger: GACAATCAGTATGTGGTACAACTGAAGGCTGTGTTC...CTGGTCAAGGAGAAGTGCAGAGAGTAAGGTGTCCTTATGTTGGAAACTCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAA +
Preference number: 5 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKARLEG*GCPRCE
Trigger: TTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGC...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
CDS-3UTR CAA 90 bp CTTGTTTCCTTAAATACACAGCTGCTTCTGGCTCACGCTCATCCTGAGGGAGTAAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 5 (lower is better)
Translates to: LVSLNTQLLLAHAHPEGVKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...TACTCCCTCAGGATGAGCGTGAGCCAGAAGCAGCTGTGTATTTAAGGAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000605159.5
CDS-3UTR CAA 90 bp AGTCCTTCCATCATTTCCTCTTCTGCATCTGGTTCCACTTCCTTCCATGTATCTAAATCTTCCTTCCACTaGAGTTTCCAACATAAGGAC +
Preference number: 5 (lower is better)
Translates to: SPSIISSSASGSTSFHVSKSSFH*SFQHKD
Trigger: GTCCTTATGTTGGAAACTCAAGTGGAAGGAAGATTT...AGATACATGGAAGGAAGTGGAACCAGATGCAGAAGAGGAAATGATGGAAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS-3UTR CAA 90 bp TTCTGCATCTGGTTCCACTTCCTTCCATGTATCTTTTATAATCACCTTATCAAAAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: FCIWFHFLPCIFYNHLIKRVEKE*TQQIQC
Trigger: GCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCT...TTTGATAAGGTGATTATAAAAGATACATGGAAGGAAGTGGAACCAGATGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
CDS TCA 72 bp ACTGCCAGCCCACCCTCGGCTCCACGTGCTTGGCCTTaGAGACGATGCCGTGGGCGCCCTCCCCGATGCGGC +
Preference number: 6 (lower is better)
Translates to: TASPPSAPRAWP*RRCRGRPPRCG
Trigger: GCCGCATCGGGGAGGGCGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGAGCCGAGGGTGGGCTGGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336654.9
CDS CCA 72 bp TGGGCGCCCTCCCCGATGCGGCCCAGGATGCAGTACTaGTCCATCCCGCTGCAGTCGTGGGCCTGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: WAPSPMRPRMQY*SIPLQSWACAP
Trigger: AGGGGCACAGGCCCACGACTGCAGCGGGATGGACCAGTACTGCATCCTGGGCCGCATCGGGGAGGGCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS CCA 72 bp AGGGAACCGAAACAGTTTAGAGCGTTAGCCGGAGGGTaGCGGGGGCACACCCCCGCCAGGCTGCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: REPKQFRALAGG*RGHTPARLPAA
Trigger: CGCGGCCGGCAGCCTGGCGGGGGTGTGCCCCCGCCACCCTCCGGCTAACGCTCTAAACTGTTTCGGTTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp CACTGCACTCCAGGGCAAGGCCCCACAAGCCAGCCCTaGAGCCTCACGTCCAGAGGCCCAGTCCCTGAACCC +
Preference number: 6 (lower is better)
Translates to: HCTPGQGPTSQP*SLTSRGPVPEP
Trigger: GGGTTCAGGGACTGGGCCTCTGGACGTGAGGCTCCAGGGCTGGCTTGTGGGGCCTTGCCCTGGAGTGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS TCA 72 bp CCTGGATGGGCCTTGGGGGCAGGTCCCCCTAGACGCTaGGGAATCGGCAGCTCAGATGGATGGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGWALGAGPPRR*GIGSSDGWAGR
Trigger: CCTGCCTGCCCATCCATCTGAGCTGCCGATTCCTCAGCGTCTAGGGGGACCTGCCCCCAAGGCCCATCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000605159.5
CDS TCA 72 bp GGGCAACTATCTCGCCAGTCTCCACGTGCTTGGCCTTaGAGACGATGCCGTGGGCGCCCTCCCCGATGCGGC +
Preference number: 6 (lower is better)
Translates to: GQLSRQSPRAWP*RRCRGRPPRCG
Trigger: GCCGCATCGGGGAGGGCGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGAGATAGTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS GCA 72 bp GCACTCCCGGACACGCGCTCTCCTGAGAGTTGGGCATaGCCCTCGTATGGGCCACCCTCAGGGGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: ALPDTRSPESWA*PSYGPPSGEVW
Trigger: CCAGACTTCCCCTGAGGGTGGCCCATACGAGGGGCATGCCCAACTCTCAGGAGAGCGCGTGTCCGGGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp CAGCCCACAGACCACAGATCGACGCCCTGGTCATACTaGCGGGCACCATACAGGAGCTCGGGGGCTCGGTAC +
Preference number: 6 (lower is better)
Translates to: QPTDHRSTPWSY*RAPYRSSGARY
Trigger: GTACCGAGCCCCCGAGCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTGGTCTGTGGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325303.9
ENST00000486228.7
CDS CCA 72 bp CAGGGGTCTCACCACAGATCGACGCCCTGGTCATACTaGCGGGCACCATACAGGAGCTCGGGGGCTCGGTAC +
Preference number: 6 (lower is better)
Translates to: QGSHHRSTPWSY*RAPYRSSGARY
Trigger: GTACCGAGCCCCCGAGCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTGGTGAGACCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459720.5
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp GACCACCCACAGGGGTCTCACCACAGATCGACGCCCTaGTCATACTGGCGGGCACCATACAGGAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: DHPQGSHHRSTP*SYWRAPYRSSG
Trigger: CCCCGAGCTCCTGTATGGTGCCCGCCAGTATGACCAGGGCGTCGATCTGTGGTGAGACCCCTGTGGGTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459720.5
ENST00000603475.1
ENST00000604175.5
CDS CAA 72 bp AGGGCAACTATCTCGCCAGTCTCCACGTGCTTGGCCTaGAAGACGATGCCGTGGGCGCCCTCCCCGATGCGG +
Preference number: 6 (lower is better)
Translates to: RATISPVSTCLA*KTMPWAPSPMR
Trigger: CCGCATCGGGGAGGGCGCCCACGGCATCGTCTTCAAGGCCAAGCACGTGGAGACTGGCGAGATAGTTGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS GCA 72 bp GGACCCCTGAGAGACACCCTGACACCTGTCAGCCCATaGTCCTGTGGTCATCGTCCTCCCAGGCCTACCAGC +
Preference number: 6 (lower is better)
Translates to: GPLRDTLTPVSP*SCGHRPPRPTS
Trigger: GCTGGTAGGCCTGGGAGGACGATGACCACAGGAGCATGGGCTGACAGGTGTCAGGGTGTCTCTCAGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp ACGCTGTTGCCTAGCAACAGCGCGGCAGCTGACCACTaGGGCGGTTCCTGTAGGCGACGTCACCAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: TLLPSNSAAADH*GGSCRRRHQEN
Trigger: GTTCTCCTGGTGACGTCGCCTACAGGAACCGCCCCAGTGGTCAGCTGCCGCGCTGTTGCTAGGCAACAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
CDS CCA 72 bp GAGAAGACTGGAAGGGATCTGGCCCTCCCTACCTGGTaGCCACCTGGTGTGTGTAGAGGCGGCTGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: EKTGRDLALPTW*PPGVCRGGCRL
Trigger: CAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp AAACCTGCACTCCCGGACACGCGCTCTCCTGAGAGTTaGGCATGCCCCTCGTATGGGCCACCCTCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: KPALPDTRSPES*ACPSYGPPSGE
Trigger: TTCCCCTGAGGGTGGCCCATACGAGGGGCATGCCCAACTCTCAGGAGAGCGCGTGTCCGGGAGTGCAGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS TCA 72 bp GGGCATGGCGCACCACCTCGGCCAGATCCGACAGCATaGACTCAAAGGCCAGCACAAAGCCTCCACCGTGTG +
Preference number: 6 (lower is better)
Translates to: GHGAPPRPDPTA*TQRPAQSLHRV
Trigger: CACACGGTGGAGGCTTTGTGCTGGCCTTTGAGTTCATGCTGTCGGATCTGGCCGAGGTGGTGCGCCATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS GCA 72 bp CAGACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGT +
Preference number: 6 (lower is better)
Translates to: QTWWPPGVCRGG*RLGKRLEPGQS
Trigger: ACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336654.9
ENST00000375883.7
ENST00000605159.5
CDS GCA 72 bp ACCACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGT +
Preference number: 6 (lower is better)
Translates to: TTWWPPGVCRGG*RLGKRLEPGQS
Trigger: ACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325303.9
CDS GCA 72 bp AGCTCCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGT +
Preference number: 6 (lower is better)
Translates to: SSWWPPGVCRGG*RLGKRLEPGQS
Trigger: ACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375871.8
CDS GCA 72 bp CCTACCTGGTGGCCACCTGGTGTGTGTAGAGGCGGCTaGCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGT +
Preference number: 6 (lower is better)
Translates to: PTWWPPGVCRGG*RLGKRLEPGQS
Trigger: ACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACCAGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp CCCAGGATGCAGTACTGGTCCATCCCGCTGCAGTCGTaGGCCTGTGCCCCTGTGCCCCTGAACTTCCAAACT +
Preference number: 6 (lower is better)
Translates to: PRMQYWSIPLQS*ACAPVPLNFQT
Trigger: AGTTTGGAAGTTCAGGGGCACAGGGGCACAGGCCCACGACTGCAGCGGGATGGACCAGTACTGCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS CCA 72 bp TCCATCTCCTGCAGAGCCTTAATCTCCCGCAGGGCCTaGTTAGGGAAGCCGTCCTCCAACCGCCTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: SISCRALISRRA*LGKPSSNRLRA
Trigger: GGCCCTAAGGCGGTTGGAGGACGGCTTCCCTAACCAGGCCCTGCGGGAGATTAAGGCTCTGCAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS CCA 72 bp GGTGGCCACCTGGTGTGTGTAGAGGCGGCTGCCGTCTaGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTAT +
Preference number: 6 (lower is better)
Translates to: GGHLVCVEAAAV*GKDSSQAKVRY
Trigger: ATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAGCCGCCTCTACACACACCAGGTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
CDS CCA 72 bp GAGGCTCCAGGCCAGGGACAAAAGTGTACTGACCCCTaGGGCTGGAGAGGAGTGAGCACAGGGCACAACAGC +
Preference number: 6 (lower is better)
Translates to: EAPGQGQKCTDP*GWRGVSTGHNS
Trigger: GCTGTTGTGCCCTGTGCTCACTCCTCTCCAGCCCCAGGGGTCAGTACACTTTTGTCCCTGGCCTGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS TCA 72 bp GGAAGCCGTCCTCCAACCGCCTTAGGGCCACCTTCTTaGGGGCAACTATCTCGCCAGTCTCCACGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: GSRPPTALGPPS*GQLSRQSPRAW
Trigger: CCAAGCACGTGGAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTTGGAGGACGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS CCA 72 bp CATGAGAGGCACACCTGCTCCAAGGCCCCTGTCCCCTaGGTTCCAGATGTCTGGTGCTGGTCCATGCCAATC +
Preference number: 6 (lower is better)
Translates to: HERHTCSKAPVP*VPDVWCWSMPI
Trigger: GATTGGCATGGACCAGCACCAGACATCTGGAACCCAGGGGACAGGGGCCTTGGAGCAGGTGTGCCTCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp ATGGGCCACCCTCAGGGGAAGTCTGGGGATGTCCAGTaGGGTCTACTCATGAGAGGCACACCTGCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: MGHPQGKSGDVQ*GLLMRGTPAPR
Trigger: CCTTGGAGCAGGTGTGCCTCTCATGAGTAGACCCCACTGGACATCCCCAGACTTCCCCTGAGGGTGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CAA 72 bp GGGAAGCCGTCCTCCAACCGCCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCAGTCTCCACGTGCTTG +
Preference number: 6 (lower is better)
Translates to: GKPSSNRLRATF*RATISPVSTCL
Trigger: CAAGCACGTGGAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTTGGAGGACGGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS CAA 90 bp CTGCCGTCTGGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTGATGAGCAGGTTGGCAGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: LPSGEKTRARPKSAI*SWPEALMSRLAGFR
Trigger: CCTGAAACCTGCCAACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCCAGACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
CDS CAA 90 bp GCCTGGTTAGGGAAGCCGTCCTCCAACCGCCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCAGTCTCCACGTGCTTGGCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: AWLGKPSSNRLRATF*RATISPVSTCLALK
Trigger: CTTCAAGGCCAAGCACGTGGAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTTGGAGGACGGCTTCCCTAACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325303.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000604175.5
ENST00000605159.5
ENST00000605591.1
CDS TCA 72 bp GATGGATGGGCAGGCAGGGGAGCTGTGAAGAAGTACTaGTGGAGGAGAGCCTTGGAAGCTGCGATGCGCTGG +
Preference number: 6 (lower is better)
Translates to: DGWAGRGAVKKY*WRRALEAAMRW
Trigger: CCAGCGCATCGCAGCTTCCAAGGCTCTCCTCCATCAGTACTTCTTCACAGCTCCCCTGCCTGCCCATCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
CDS CCA 72 bp AAAGGCCCAGAAGCATCTCTTCCCCATGGAGAAGACTaGAAGGGATCTGGCCCTCCCTACCTGGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: KGPEASLPHGED*KGSGPPYLVAT
Trigger: GGTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCTTCTGGGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp CTGGGAGGCAACCCAAGAGATAAGGGTCACACGGCTTaGGTACACTGTGGACACAGAGCCCACAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: LGGNPRDKGHTA*VHCGHRAHRSC
Trigger: GCAGCTCCTGTGGGCTCTGTGTCCACAGTGTACCCAAGCCGTGTGACCCTTATCTCTTGGGTTGCCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CAA 72 bp GGGGAAAAGACTCGAGCCAGGCCAAAGTCCGCTATCTaGAGCTGGCCTGAGGCGCTGATGAGCAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: GEKTRARPKSAI*SWPEALMSRLA
Trigger: TGCCAACCTGCTCATCAGCGCCTCAGGCCAGCTCAAGATAGCGGACTTTGGCCTGGCTCGAGTCTTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
ENST00000605159.5
CDS CAA 72 bp CCCACCTCACCAAGGGCCCCTACAAACCGGCCAGACTaGAGGGTTTGGGGTGCCCAAGATGCGAAGCACATA +
Preference number: 6 (lower is better)
Translates to: PTSPRAPTNRPD*RVWGAQDAKHI
Trigger: TATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGGTGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CAA 90 bp GCCTGGTTAGGGAAGCCGTCCTCCAACCGCCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCAGTCTGCAGGATAGAAGGCAGACAC +
Preference number: 6 (lower is better)
Translates to: AWLGKPSSNRLRATF*RATISPVCRIEGRH
Trigger: GTGTCTGCCTTCTATCCTGCAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTTGGAGGACGGCTTCCCTAACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000603475.1
CDS CAA 90 bp AGCCTTGGAAGCTGCGATGCGCTGGTGAGGAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGCCTGGGGAGAGACGTCAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SLGSCDALVRRVEKE*TQQIQCLGRDVRQH
Trigger: GTGCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325303.9
ENST00000336654.9
ENST00000375871.8
ENST00000375883.7
ENST00000459720.5
ENST00000486228.7
CDS CAA 90 bp GAGCTTGGAAGCTGCGATGCGCTGGTGAGGAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGCCTGGGGAGAGACGTCAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: ELGSCDALVRRVEKE*TQQIQCLGRDVRQH
Trigger: GTGCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605159.5
CDS CAA 90 bp AGACCCCATGCCCGGCCTATGCTGAGACTGACCCGATGTACAATGTaGTTGGCATGGCAGAAGGCGACACCCTTGAGCAGCATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RPHARPMLRLTRCTM*LAWQKATPLSSICR
Trigger: CCTGCAGATGCTGCTCAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGTACATCGGGTCAGTCTCAGCATAGGCCGGGCATGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000603475.1
ENST00000604175.5
ENST00000605591.1
CDS CAA 90 bp TACCTTGGAAGCTGCGATGCGCTGGTGAGGAGGGTAGAGAAGGAATaGACCCAGCAGATCCAATGCCTGGGGAGAGACGTCAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: YLGSCDALVRRVEKE*TQQIQCLGRDVRQH
Trigger: GTGCTGCCTGACGTCTCTCCCCAGGCATTGGATCTGCTGGGTCAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS TCA 72 bp CCTGGGGCTCCCACAGCTGGAGAACATGACCTCTTGTaGCCTTTTGGACCTGGAGCTACCTCACCACCAGGA +
Preference number: 6 (lower is better)
Translates to: PGAPTAGEHDLL*PFGPGATSPPG
Trigger: TCCTGGTGGTGAGGTAGCTCCAGGTCCAAAAGGTCACAAGAGGTCATGTTCTCCAGCTGTGGGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp TGCCCCGCGGAGGTAGGACTGATTGTTTACCATCTGTaGAGGGCCCAGGACAATCCCTGCATGTGCCAGATG +
Preference number: 6 (lower is better)
Translates to: CPAEVGLIVYHL*RAQDNPCMCQM
Trigger: CATCTGGCACATGCAGGGATTGTCCTGGGCCCTGCACAGATGGTAAACAATCAGTCCTACCTCCGCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp AGCATCTCTTCCCCATGGAGAAGACTGGAAGGGATCTaGCCCTCCCTACCTGGTGGCCACCTGGTGTGTGTA +
Preference number: 6 (lower is better)
Translates to: SISSPWRRLEGI*PSLPGGHLVCV
Trigger: TACACACACCAGGTGGCCACCAGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp CCAAGGGCCCCTACAAACCGGCCAGACTTGAGGGTTTaGGGTGCCCAAGATGCGAAGCACATAGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PRAPTNRPDLRV*GAQDAKHIAKL
Trigger: CAGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CAA 72 bp GGGAAGCCGTCCTCCAACCGCCTTAGGGCCACCTTCTaGAGGGCAACTATCTCGCCAGTCTGCAGGATAGAA +
Preference number: 6 (lower is better)
Translates to: GKPSSNRLRATF*RATISPVCRIE
Trigger: TTCTATCCTGCAGACTGGCGAGATAGTTGCCCTCAAGAAGGTGGCCCTAAGGCGGTTGGAGGACGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336654.9
ENST00000603475.1
CDS CAA 72 bp GCCCGGCCTATGCTGAGACTGACCCGATGTACAATGTaGTTGGCATGGCAGAAGGCGACACCCTTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARPMLRLTRCTM*LAWQKATPLSS
Trigger: GCTGCTCAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGTACATCGGGTCAGTCTCAGCATAGGCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000603475.1
ENST00000604175.5
ENST00000605591.1
CDS CAA 72 bp CTCCCACAGCTGGAGAACATGACCTCTTGTGACCTTTaGGACCTGGAGCTACCTCACCACCAGGAGTGCCCC +
Preference number: 6 (lower is better)
Translates to: LPQLENMTSCDL*DLELPHHQECP
Trigger: GGGGCACTCCTGGTGGTGAGGTAGCTCCAGGTCCAAAAGGTCACAAGAGGTCATGTTCTCCAGCTGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS TCA 72 bp TTGCCTCTCTCCTGGGGCTCCCACAGCTGGAGAACATaGCCTCTTGTGACCTTTTGGACCTGGAGCTACCTC +
Preference number: 6 (lower is better)
Translates to: LPLSWGSHSWRT*PLVTFWTWSYL
Trigger: GAGGTAGCTCCAGGTCCAAAAGGTCACAAGAGGTCATGTTCTCCAGCTGTGGGAGCCCCAGGAGAGAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp AGACTACAGCCTCTCCCCCTACCTTGGAAGCTGCGATaGGCTGGTGAGGAGGGTAGAGAAGGAATTGACCCA +
Preference number: 6 (lower is better)
Translates to: RLQPLPLPWKLR*AGEEGREGIDP
Trigger: TGGGTCAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGGTAGGGGGAGAGGCTGTAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp AGCAGAGACTACAGCCTCTCCCCCTACCTTGGAAGCTaGGATGCGCTGGTGAGGAGGGTAGAGAAGGAATTG +
Preference number: 6 (lower is better)
Translates to: SRDYSLSPYLGS*DALVRRVEKEL
Trigger: CAATTCCTTCTCTACCCTCCTCACCAGCGCATCGCAGCTTCCAAGGTAGGGGGAGAGGCTGTAGTCTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp CTGTCCCCTGGGTTCCAGATGTCTGGTGCTGGTCCATaGCAATCACAGGTTCTGAGGGTCGCTGATGTGATG +
Preference number: 6 (lower is better)
Translates to: LSPGFQMSGAGP*QSQVLRVADVM
Trigger: CATCACATCAGCGACCCTCAGAACCTGTGATTGGCATGGACCAGCACCAGACATCTGGAACCCAGGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp GACCTTTTGGACCTGGAGCTACCTCACCACCAGGAGTaGCCCGCGGAGGTAGGACTGATTGTTTACCATCTG +
Preference number: 6 (lower is better)
Translates to: DLLDLELPHHQE*PAEVGLIVYHL
Trigger: CAGATGGTAAACAATCAGTCCTACCTCCGCGGGGCACTCCTGGTGGTGAGGTAGCTCCAGGTCCAAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CAA 72 bp ACCAAGGGCCCCTACAAACCGGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAAGCACATAGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: TKGPYKPARLEG*GCPRCEAHSKA
Trigger: AGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS TCA 72 bp TCCAGGGCCATGCCCTGGCCACTTACCTGGAGGCCTTaGCCAGCTCTGTCCCAACTTCTTATCACACCTTTT +
Preference number: 6 (lower is better)
Translates to: SRAMPWPLTWRP*PALSQLLITPF
Trigger: AAAAGGTGTGATAAGAAGTTGGGACAGAGCTGGTCAAGGCCTCCAGGTAAGTGGCCAGGGCATGGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603475.1
ENST00000604175.5
CDS GCA 72 bp ATCTCATGCTTAAACCTGCCCTCCACCAGGAAGCTTTaGTTGACCCCAAAGTCGGCCTTGCCTCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ISCLNLPSTRKL*LTPKSALPLSW
Trigger: CCAGGAGAGAGGCAAGGCCGACTTTGGGGTCAAGCAAAGCTTCCTGGTGGAGGGCAGGTTTAAGCATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp TGTCTGGAGAAAAGGCCCAGAAGCATCTCTTCCCCATaGAGAAGACTGGAAGGGATCTGGCCCTCCCTACCT +
Preference number: 6 (lower is better)
Translates to: CLEKRPRSISSP*RRLEGIWPSLP
Trigger: AGGTAGGGAGGGCCAGATCCCTTCCAGTCTTCTCCATGGGGAAGAGATGCTTCTGGGCCTTTTCTCCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000459720.5
ENST00000486228.7
ENST00000603475.1
ENST00000604175.5
CDS CCA 72 bp CAAGACTTCTCGGAGACTCCTGCTCTAGGACACTTCTaGGGCAGACCTGCAAACCTGCCCCAAATCTCAGAC +
Preference number: 6 (lower is better)
Translates to: QDFSETPALGHF*GRPANLPQISD
Trigger: GTCTGAGATTTGGGGCAGGTTTGCAGGTCTGCCCCAGAAGTGTCCTAGAGCAGGAGTCTCCGAGAAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 72 bp AGAAGCATCAGTCCCTCCAAATCCCCCATAGGACCTTaGGACAAGCGGGCTTGGCAGTCTAACCACTCAGGT +
Preference number: 6 (lower is better)
Translates to: RSISPSKSPIGP*DKRAWQSNHSG
Trigger: ACCTGAGTGGTTAGACTGCCAAGCCCGCTTGTCCCAAGGTCCTATGGGGGATTTGGAGGGACTGATGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603475.1
ENST00000604175.5
CDS CAA 72 bp CCCCTTGCCCTCTCAGATGACGACTCTGTGCACAGCTaGCTGAGACACTGCACATGTGTGTACTGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: PLALSDDDSVHS*LRHCTCVYWGE
Trigger: TTCACCCCAGTACACACATGTGCAGTGTCTCAGCAAGCTGTGCACAGAGTCGTCATCTGAGAGGGCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CAA 72 bp CGGCCTATGCTGAGACTGACCCGATGTACAATGTTGTaGGCATGGCAGAAGGCGACACCCTTGAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: RPMLRLTRCTML*AWQKATPLSSI
Trigger: GATGCTGCTCAAGGGTGTCGCCTTCTGCCATGCCAACAACATTGTACATCGGGTCAGTCTCAGCATAGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000603475.1
ENST00000604175.5
ENST00000605591.1
CDS CAA 90 bp ACCCACCTCACCAAGGGCCCCTACAAACCGGCCAGACTTGAGGGTTaGGGGTGCCCAAGATGCGAAGCACATAGCAAAGCTGTTCAATAT +
Preference number: 6 (lower is better)
Translates to: THLTKGPYKPARLEG*GCPRCEAHSKAVQY
Trigger: ATATTGAACAGCTTTGCTATGTGCTTCGCATCTTGGGCACCCCAAACCCTCAAGTCTGGCCGGTTTGTAGGGGCCCTTGGTGAGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS TCA 72 bp TGCTGGTCCATGCCAATCACAGGTTCTGAGGGTCGCTaGTGTGATGGGGTCACATGGCTACCAAGTACAGAG +
Preference number: 6 (lower is better)
Translates to: CWSMPITGSEGR*CDGVTWLPSTE
Trigger: CTCTGTACTTGGTAGCCATGTGACCCCATCACATCAGCGACCCTCAGAACCTGTGATTGGCATGGACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CCA 72 bp GAGGCGCTGATGAGCAGGTTGGCAGGTTTCAGGTCCTaGGAGTACCAAAAGAAGCATCAGTCCCTCCAAATC +
Preference number: 6 (lower is better)
Translates to: EALMSRLAGFRS*EYQKKHQSLQI
Trigger: GATTTGGAGGGACTGATGCTTCTTTTGGTACTCCCAGGACCTGAAACCTGCCAACCTGCTCATCAGCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603475.1
ENST00000604175.5
CDS GCA 72 bp AAGGAACAGGGTACAATGAGAGTAGTTCCCGACCCTTaGCATGCTCTCTGCTGTCAACTCTCAGCCCCTAAC +
Preference number: 6 (lower is better)
Translates to: KEQGTMRVVPDP*HALCCQLSAPN
Trigger: GTTAGGGGCTGAGAGTTGACAGCAGAGAGCATGGCAAGGGTCGGGAACTACTCTCATTGTACCCTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CAA 90 bp AACCTGCCCCAAATCTCAGACCCATGGGCACTGCCAACTATCTTCTaGCTGCAAAACAAGCTCAGAGCTTTCATGTCCAAGGACACAGGC +
Preference number: 6 (lower is better)
Translates to: NLPQISDPWALPTIF*LQNKLRAFMSKDTG
Trigger: GCCTGTGTCCTTGGACATGAAAGCTCTGAGCTTGTTTTGCAGCAAGAAGATAGTTGGCAGTGCCCATGGGTCTGAGATTTGGGGCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS GCA 72 bp CTGCAAACCTGCCCCAAATCTCAGACCCATGGGCACTaGCAACTATCTTCTTGCTGCAAAACAAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: LQTCPKSQTHGH*QLSSCCKTSSE
Trigger: CTCTGAGCTTGTTTTGCAGCAAGAAGATAGTTGGCAGTGCCCATGGGTCTGAGATTTGGGGCAGGTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS GCA 72 bp ACAATGAGAGTAGTTCCCGACCCTTGCCATGCTCTCTaGTGTCAACTCTCAGCCCCTAACACACACTCACAT +
Preference number: 6 (lower is better)
Translates to: TMRVVPDPCHAL*CQLSAPNTHSH
Trigger: ATGTGAGTGTGTGTTAGGGGCTGAGAGTTGACAGCAGAGAGCATGGCAAGGGTCGGGAACTACTCTCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS CCA 72 bp GAAGAGATTAAATGGGATGAGGGGAGACCCAGATTCTaGGAGGCAACCCAAGAGATAAGGGTCACACGGCTT +
Preference number: 6 (lower is better)
Translates to: EEIKWDEGRPRF*EATQEIRVTRL
Trigger: AAGCCGTGTGACCCTTATCTCTTGGGTTGCCTCCCAGAATCTGGGTCTCCCCTCATCCCATTTAATCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS TCA 72 bp AGAGGAATGAGGAATCCTGGAGAGAGGTTGCAGATCTaGAGAGTCATGAGGGAAGGCCATCTGAGAAGTGAC +
Preference number: 6 (lower is better)
Translates to: RGMRNPGERLQI*RVMREGHLRSD
Trigger: GTCACTTCTCAGATGGCCTTCCCTCATGACTCTTCAGATCTGCAACCTCTCTCCAGGATTCCTCATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp TTTCTCTCTTCAGCGAACACCTCCTCAAACATCTCATaGTTAAACCTGCCCTCCACCAGGAAGCTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: FLSSANTSSNIS*LNLPSTRKLCL
Trigger: CAAGCAAAGCTTCCTGGTGGAGGGCAGGTTTAAGCATGAGATGTTTGAGGAGGTGTTCGCTGAAGAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS GCA 72 bp ATTGTTTACCATCTGTGCAGGGCCCAGGACAATCCCTaGATGTGCCAGATGTGCAGAAAATACTTGCTAATG +
Preference number: 6 (lower is better)
Translates to: IVYHLCRAQDNP*MCQMCRKYLLM
Trigger: CATTAGCAAGTATTTTCTGCACATCTGGCACATGCAGGGATTGTCCTGGGCCCTGCACAGATGGTAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1
CDS CAA 72 bp CAAATCTCAGACCCATGGGCACTGCCAACTATCTTCTaGCTGCAAAACAAGCTCAGAGCTTTCATGTCCAAG +
Preference number: 6 (lower is better)
Translates to: QISDPWALPTIF*LQNKLRAFMSK
Trigger: CTTGGACATGAAAGCTCTGAGCTTGTTTTGCAGCAAGAAGATAGTTGGCAGTGCCCATGGGTCTGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459720.5
ENST00000603475.1
CDS TCA 72 bp AGTGTGTCTGGGTGTTTTCTGAGTGTCTACTATGTCTaGAGCACTATTCCAGAAGCTGGGAACATAGCCGTT +
Preference number: 6 (lower is better)
Translates to: SVSGCFLSVYYV*STIPEAGNIAV
Trigger: AACGGCTATGTTCCCAGCTTCTGGAATAGTGCTTCAGACATAGTAGACACTCAGAAAACACCCAGACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603475.1