RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK19 (Homo sapiens)

Ensembl gene IDs: ENSG00000155111

Ensembl transcript IDs: ENST00000323817.7, ENST00000368911.8, ENST00000413605.6, ENST00000457688.5, ENST00000460913.1, ENST00000463016.1, ENST00000468997.5, ENST00000497709.1

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAGGAAACCCTCGCTCCAAAGCAGTAGCTCGTCCTGCACTCCATaGAGCAGGCCTCGCTGGGGTGCAGCGGCTCTGAGCACAAACCTC +
Preference number: 1 (lower is better)
Translates to: SRKPSLQSSSSSCTP*SRPRWGAAALSTNL
Trigger: GAGGTTTGTGCTCAGAGCCGCTGCACCCCAGCGAGGCCTGCTCCATGGAGTGCAGGACGAGCTACTGCTTTGGAGCGAGGGTTTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 90 bp AGAAGTGCTGGGATTAGATCAGACGCTTTATCAGAGAAGTCACAATaGAACACATGCAGGGAAGGGGTGCTGGGGAAACTTCACAAGAAT +
Preference number: 1 (lower is better)
Translates to: RSAGIRSDALSEKSQ*NTCREGVLGKLHKN
Trigger: ATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGATAAAGCGTCTGATCTAATCCCAGCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR GCA 90 bp ACAGCAGGAGACTATCAGAAACTCCTTCCAATGGAGCACGTAACCTaGTTCATCTTCAGTCTTGATGAGTGTCACTATGCAGACTTCATT +
Preference number: 1 (lower is better)
Translates to: TAGDYQKLLPMEHVT*FIFSLDECHYADFI
Trigger: AATGAAGTCTGCATAGTGACACTCATCAAGACTGAAGATGAAGCAGGTTACGTGCTCCATTGGAAGGAGTTTCTGATAGTCTCCTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 90 bp CTCCTTACAGAAATCCTAGTGCAGTTGTTACTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTGTACAAAGCTCTTGAAACCCTTTTT +
Preference number: 1 (lower is better)
Translates to: LLTEILVQLLLSSAF*CGPSRLYKALETLF
Trigger: AAAAAGGGTTTCAAGAGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTGCACTAGGATTTCTGTAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR GCA 90 bp ACGCTTTATCAGAGAAGTCACAATGGAACACATGCAGGGAAGGGGTaGTGGGGAAACTTCACAAGAATCTTCTTTAAGTCAATAAAGAAG +
Preference number: 1 (lower is better)
Translates to: TLYQRSHNGTHAGKG*WGNFTRIFFKSIKK
Trigger: CTTCTTTATTGACTTAAAGAAGATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGATAAAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 90 bp AGATTTCTGGCTATGTCCTGGAGGATATTGTATACTGGGAGCAACTaGCGAAATCCCCTTACAGTTTATATTTCAGTTCTGCCAGCAAAA +
Preference number: 1 (lower is better)
Translates to: RFLAMSWRILYTGSN*RNPLTVYISVLPAK
Trigger: TTTTGCTGGCAGAACTGAAATATAAACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATACAATATCCTCCAGGACATAGCCAGAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 90 bp TGTGGAATGGAGATTTCTGGCTATGTCCTGGAGGATATTGTATACTaGGAGCAACTGACGAAATCCCCTTACAGTTTATATTTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: CGMEISGYVLEDIVY*EQLTKSPYSLYFSS
Trigger: AGAACTGAAATATAAACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATACAATATCCTCCAGGACATAGCCAGAAATCTCCATTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 90 bp TGTTCTGCCTACAAGGACCACCCAGTTGTTGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTCAATGCCTTTTGTGATATTGAATCA +
Preference number: 1 (lower is better)
Translates to: CSAYKDHPVVVKRLL*TFQRYVNAFCDIES
Trigger: TGATTCAATATCACAAAAGGCATTGACGTATCTTTGAAATGTTCACAGCAGCCTTTTAACAACAACTGGGTGGTCCTTGTAGGCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 90 bp GTCCTGGCTGGCTACAGTATCACATCAATAGTGCAAAATGTATACTaGCTTCTGTCTAATCTTATTTTACTTGTGTATGGACCCACAGTA +
Preference number: 1 (lower is better)
Translates to: VLAGYSITSIVQNVY*LLSNLILLVYGPTV
Trigger: TACTGTGGGTCCATACACAAGTAAAATAAGATTAGACAGAAGCCAGTATACATTTTGCACTATTGATGTGATACTGTAGCCAGCCAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 90 bp AGTAACCTTGATTATGCAAGAAAGTTACTCACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTTAGAGAAGCCGACTTTATGTACAAT +
Preference number: 1 (lower is better)
Translates to: SNLDYARKLLTQTQM*RNQWFFREADFMYN
Trigger: ATTGTACATAAAGTCGGCTTCTCTAAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGTGAGTAACTTTCTTGCATAATCAAGGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 90 bp TTTTATACAAAATATTACTTGTACTTGAATCCTTCAAGCCTCTGTTaGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGA +
Preference number: 1 (lower is better)
Translates to: FYTKYYLYLNPSSLC*SNCHFTAFLYSLGR
Trigger: TCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACAGAGGCTTGAAGGATTCAAGTACAAGTAATATTTTGTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGG +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAACALG*AGLAQR
Trigger: CCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHACALG*AGLAQR
Trigger: CCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTATTGCTGGAGCCTGTaGTCTGGGCTGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAYCWSL*SGLGWP
Trigger: AGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTGCTCTGGGCTGGGCTaGCCTGGCCCAACGGGAGCT +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLCSGLG*PGPTGA
Trigger: AGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGCCAGACGTGGTGGTaGGTGCCCGTAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSQTWW*VPVVPA
Trigger: AGCTGGGACTACGGGCACGCACCACCACGTCTGGCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGG +
Preference number: 2 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYACALG*AGLAQR
Trigger: CCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTGCTCTGGGCTGGGCTaGCCTGGCCCAACGGGAGCT +
Preference number: 2 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYCSGLG*PGPTGA
Trigger: AGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTG +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYALSSAF*CGPSRL
Trigger: CAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCATGCAGGGAAGGGGTaGTGGGGAAACTTCACAAGA +
Preference number: 2 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAHAGKG*WGNFTR
Trigger: TCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGCATG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAGCCAGACGTGGTGGTaGGTGCCCGTAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSQTWW*VPVVPA
Trigger: AGCTGGGACTACGGGCACGCACCACCACGTCTGGCT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCAGGGAAGGGGTGCTaGGGAAACTTCACAAGAATC +
Preference number: 2 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAGKGC*GNFTRI
Trigger: GATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGGCTTTGTTCCCAACTaGGTGCGGTGGCTCACACCT +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHGFVPN*VRWLTP
Trigger: AGGTGTGAGCCACCGCACCCAGTTGGGAACAAAGCC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGCACCAGGCACATGGTaGGGGTGCAATAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLAPGTW*GCNKHL
Trigger: CAGATGCTTATTGCACCCTCACCATGTGCCTGGTGC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCACCAGGCACATGGTaGGGGTGCAATAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAPGTW*GCNKHL
Trigger: CAGATGCTTATTGCACCCTCACCATGTGCCTGGTGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGAGGTCCCACGGTTTaGGGGCCCTTACGTGTGTTA +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRGPTV*GPLRVL
Trigger: TAACACACGTAAGGGCCCTCAAACCGTGGGACCTCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTATTGCTGGAGCCTGTaGTCTGGGCTGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAYCWSL*SGLGWP
Trigger: AGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTGGAAGGTGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLEGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTCCAACCTCCACCTTCCAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCATGCAGGGAAGGGGTaGTGGGGAAACTTCACAAGA +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHHAGKG*WGNFTR
Trigger: TCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGCATG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCAGGGAAGGGGTGCTaGGGAAACTTCACAAGAATC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAGKGC*GNFTRI
Trigger: GATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGGTAAAGGGAATCAGTaGGTAGCACGAACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHGKGNQ*VARTLR
Trigger: CCTCAGGGTTCGTGCTACCCACTGATTCCCTTTACC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGGTAAAGGGAATCAGTaGGTAGCACGAACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLGKGNQ*VARTLR
Trigger: CCTCAGGGTTCGTGCTACCCACTGATTCCCTTTACC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCGGATGACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKADDLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCTCACCTCAGGTCATCCGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAGAGGTCCCACGGTTTaGGGGCCCTTACGTGTGTTA +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKRGPTV*GPLRVL
Trigger: TAACACACGTAAGGGCCCTCAAACCGTGGGACCTCT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTCAATGCAGACATATTaGTGGAGCCTGTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSMQTY*WSLCSG
Trigger: CCCAGAGCACAGGCTCCAGCAATATGTCTGCATTGA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCACAATGGAACACATaGAGGGAAGGGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASQWNT*REGVLG
Trigger: CCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAACAGCTCTGGACAGTaGGGCTTTAGGGCACAGGAT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKNSSGQ*GFRAQD
Trigger: ATCCTGTGCCCTAAAGCCTCACTGTCCAGAGCTGTT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAAAGCTACCTTACCTTaGGCTCATCTGTCCTGCAAC +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLKATLP*AHLSCN
Trigger: GTTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATATTGCTGGAGCCTGTaGTCTGGGCTGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSYCWSL*SGLGWP
Trigger: AGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTCACAATGGAACACATaGAGGGAAGGGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYSQWNT*REGVLG
Trigger: CCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGCAGGGAAGGGGTGCTaGGGAAACTTCACAAGAATC +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAAGKGC*GNFTRI
Trigger: GATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTACTTCAGTTCTTCGTaGCATAAAGCACATAACTGC +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAYFSSS*HKAHNC
Trigger: GCAGTTATGTGCTTTATGCCACGAAGAACTGAAGTA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTG +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSALSSAF*CGPSRL
Trigger: CAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTG +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLSSAF*CGPSRL
Trigger: CAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCCTTCAAAGAAATGCTaGAGGTTACAGAAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHPSKKC*RLQKCW
Trigger: CCAGCACTTCTGTAACCTTCAGCATTTCTTTGAAGG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLTQTQM*RNQWFF
Trigger: AAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTTTCAGGCTTCTACTTaGGTAACCTTGATTATGCAA +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAFQAST*VTLIMQ
Trigger: TTGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTATACTGGGAGCAACTaGCGAAATCCCCTTACAGTT +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLYTGSN*RNPLTV
Trigger: AACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTCAATGCAGACATATTaGTGGAGCCTGTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSMQTY*WSLCSG
Trigger: CCCAGAGCACAGGCTCCAGCAATATGTCTGCATTGA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCATAAACCATAGTGATTaGTACAGCATGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAINHSD*YSMRKV
Trigger: CACCTTTCTCATGCTGTAGCAATCACTATGGTTTAT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGAACAAGTAGCAGTTaGTTCACCAGGAATGAGGCA +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHRTSSS*FTRNEA
Trigger: TGCCTCATTCCTGGTGAAGCAACTGCTACTTGTTCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGATCAGTAAGGTCCTaGCTGGCTACAGTATCACAT +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHRSVRS*LATVSH
Trigger: ATGTGATACTGTAGCCAGCCAGGACCTTACTGATCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTTCCTCCCATGTGTATaGGTTTTAAATGGCATCATA +
Preference number: 2 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAFLPCV*VLNGII
Trigger: TATGATGCCATTTAAAACTCATACACATGGGAGGAA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTATTCAGAATAAGATaGTGCTGGGAACTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLFRIR*CWELSS
Trigger: GGAACTGAGTTCCCAGCATCATCTTATTCTGAATAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCACAATGGAACACATaGAGGGAAGGGGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSQWNT*REGVLG
Trigger: CCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTATAAACCATAGTGATTaGTACAGCATGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAINHSD*YSMRKV
Trigger: CACCTTTCTCATGCTGTAGCAATCACTATGGTTTAT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCATAAAGCACATAACTaGAAAGATCTAGGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAHKAHN*KDLGSF
Trigger: AAAACTGCCTAGATCTTTGCAGTTATGTGCTTTATG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGATGGAGCACGTAACCTaGTTCATCTTCAGTCTTGAT +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLMEHVT*FIFSLD
Trigger: ATCAAGACTGAAGATGAAGCAGGTTACGTGCTCCAT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTCAGCGTTTTGGTGTaGGCCATCGAGACTGTACAA +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFSVLV*AIETVQ
Trigger: TTGTACAGTCTCGATGGCCCACACCAAAACGCTGAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGTAAGTCAATCACATaGCACAGACATCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKCKSIT*HRHPRR
Trigger: CCTCCTGGGATGTCTGTGCCATGTGATTGACTTACA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGAGGATATTGTATACTaGGAGCAACTGACGAAATCC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHEDIVY*EQLTKS
Trigger: GGATTTCGTCAGTTGCTCCCAGTATACAATATCCTC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCAGAAAGCCTTCACTTaGATTCATTCCTTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHQKAFT*IHSFLS
Trigger: TGACAGGAAGGAATGAATCCAAGTGAAGGCTTTCTG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCCTTCAAAGAAATGCTaGAGGTTACAGAAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKPSKKC*RLQKCW
Trigger: CCAGCACTTCTGTAACCTTCAGCATTTCTTTGAAGG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSATQTQM*RNQWFF
Trigger: AAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKTQTQM*RNQWFF
Trigger: AAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHVKRLL*TFQRYV
Trigger: GACGTATCTTTGAAATGTTCACAGCAGCCTTTTAAC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAACAGGGTAGTTCTGTaGATGTATAAGCGTAAGAAC +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLNRVVL*MYKRKN
Trigger: GTTCTTACGCTTATACATTCACAGAACTACCCTGTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTTGTATGTCACTGCATaGTCTACTTCATCACAAGGA +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLYVTA*STSSQG
Trigger: TCCTTGTGATGAAGTAGATCATGCAGTGACATACAA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTTGGTTCTTTTCAATaGAGACATATTGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLFGSFQ*RHIAGA
Trigger: GGCTCCAGCAATATGTCTGCATTGAAAAGAACCAAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCAGTCATGTGTGGAATaGAGATTTCTGGCTATGTCC +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKQSCVE*RFLAMS
Trigger: GGACATAGCCAGAAATCTCCATTCCACACATGACTG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTCCTCCCATGTGTATaGGTTTTAAATGGCATCATA +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLFLPCV*VLNGII
Trigger: TATGATGCCATTTAAAACTCATACACATGGGAGGAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCTATTCAGAATAAGATaGTGCTGGGAACTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSALFRIR*CWELSS
Trigger: GGAACTGAGTTCCCAGCATCATCTTATTCTGAATAG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCTATTCAGAATAAGATaGTGCTGGGAACTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLFRIR*CWELSS
Trigger: GGAACTGAGTTCCCAGCATCATCTTATTCTGAATAG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGATAAACCATAGTGATTaGTACAGCATGAGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLINHSD*YSMRKV
Trigger: CACCTTTCTCATGCTGTAGCAATCACTATGGTTTAT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCATGGAGCACGTAACCTaGTTCATCTTCAGTCTTGAT +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAMEHVT*FIFSLD
Trigger: ATCAAGACTGAAGATGAAGCAGGTTACGTGCTCCAT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCACAAAGGTAAAGTTTaGCCTCAAAAAGCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHHKGKV*PQKASK
Trigger: CTTTGAAGCTTTTTGAGGGCAAACTTTACCTTTGTG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAATTTCAAAGAGAAATaGCATCATTTGGGGACCACA +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLNFKEK*HHLGTT
Trigger: TGTGGTCCCCAAATGATGGCATTTCTCTTTGAAATT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGGAATGGAGATTTCTaGCTATGTCCTGGAGGATAT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKWNGDF*LCPGGY
Trigger: ATATCCTCCAGGACATAGCCAGAAATCTCCATTCCA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTACCAAGCAAAAGTTCTaGAGCCCGATACCAAAATGT +
Preference number: 2 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGITKQKF*SPIPKC
Trigger: ACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGT...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463016.1
3UTR-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTTGGTTCTTTTCAATaGAGACATATTGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFGSFQ*RHIAGA
Trigger: GGCTCCAGCAATATGTCTGCATTGAAAAGAACCAAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCATAAAGCACATAACTaGAAAGATCTAGGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLHKAHN*KDLGSF
Trigger: AAAACTGCCTAGATCTTTGCAGTTATGTGCTTTATG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTATTTTACTTGTGTATaGACCCACAGTATCATAACC +
Preference number: 2 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHYFTCV*THSIIT
Trigger: GGTTATGATACTGTGGGTCCATACACAAGTAAAATA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTATTTTACTTGTGTATaGACCCACAGTATCATAACC +
Preference number: 2 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLYFTCV*THSIIT
Trigger: GGTTATGATACTGTGGGTCCATACACAAGTAAAATA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTCCTCCCATGTGTATaGGTTTTAAATGGCATCATA +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAFLPCV*VLNGII
Trigger: TATGATGCCATTTAAAACTCATACACATGGGAGGAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTTCAGGCTTCTACTTaGGTAACCTTGATTATGCAA +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAFQAST*VTLIMQ
Trigger: TTGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGATCAGTCCTGCACAATaGTCAGTATATAAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKISPAQ*SVYKVF
Trigger: GAAAACCTTATATACTGAGCATTGTGCAGGACTGAT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAGAACACAAATTTCTTaGCCCTTACATTACAATGGG +
Preference number: 2 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSARTQIS*PLHYNG
Trigger: CCCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGACCTTCTATTTTCCTTaGAATTTCCTACAACCACTT +
Preference number: 2 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKTFYFP*NFLQPL
Trigger: AAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTTGGTTCTTTTCAATaGAGACATATTGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSFGSFQ*RHIAGA
Trigger: GGCTCCAGCAATATGTCTGCATTGAAAAGAACCAAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATACTTCAGTTCTTCGTaGCATAAAGCACATAACTGC +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSYFSSS*HKAHNC
Trigger: GCAGTTATGTGCTTTATGCCACGAAGAACTGAAGTA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAATCAGTCCTGCACAATaGTCAGTATATAAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSISPAQ*SVYKVF
Trigger: GAAAACCTTATATACTGAGCATTGTGCAGGACTGAT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAGAACACAAATTTCTTaGCCCTTACATTACAATGGG +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSRTQIS*PLHYNG
Trigger: CCCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATATTTTACTTGTGTATaGACCCACAGTATCATAACC +
Preference number: 2 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSYFTCV*THSIIT
Trigger: GGTTATGATACTGTGGGTCCATACACAAGTAAAATA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 72 bp CCCTCGCTCCAAAGCAGTAGCTCGTCCTGCACTCCATaGAGCAGGCCTCGCTGGGGTGCAGCGGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: PSLQSSSSSCTP*SRPRWGAAALS
Trigger: GCTCAGAGCCGCTGCACCCCAGCGAGGCCTGCTCCATGGAGTGCAGGACGAGCTACTGCTTTGGAGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTTCAATGCAGACATATaGCTGGAGCCTGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAFNADI*LEPVLW
Trigger: CCAGAGCACAGGCTCCAGCAATATGTCTGCATTGAA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCTTCATCTTCAGTCTaGATGAGTGTCACTATGCAG +
Preference number: 3 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAASSSV*MSVTMQ
Trigger: CTGCATAGTGACACTCATCAAGACTGAAGATGAAGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGGCAGGAGAATCACTaGAACCTGGAAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRQENH*NLEGGG
Trigger: ACCTCCACCTTCCAGGTTCAAGTGATTCTCCTGCCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGAAATCCTAGTGCAGTaGTTACTCTCTTCAGCGTTT +
Preference number: 3 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAEILVQ*LLSSAF
Trigger: AAACGCTGAAGAGAGTAACAACTGCACTAGGATTTC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGACAAGGACCACCCAGTaGTTGTTAAAAGGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLTRTTQ*LLKGCC
Trigger: ACAGCAGCCTTTTAACAACAACTGGGTGGTCCTTGT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTGTGTTAAAAAGGCTTaGTTCCCAACTGGGTGCGGT +
Preference number: 3 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHCVKKA*FPTGCG
Trigger: ACCGCACCCAGTTGGGAACAAAGCCTTTTTAACACA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 72 bp GAAATCCTAGTGCAGTTGTTACTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTGTACAAAGCTCTTGAA +
Preference number: 3 (lower is better)
Translates to: EILVQLLLSSAF*CGPSRLYKALE
Trigger: TTCAAGAGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTGCACTAGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTCAATGCAGACATATaGCTGGAGCCTGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFNADI*LEPVLW
Trigger: CCAGAGCACAGGCTCCAGCAATATGTCTGCATTGAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGATCTAGGCAGTTTTaGGTTGTAGGTTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHRSRQF*VVGSLC
Trigger: ACAGAGGGAACCTACAACCAAAAACTGCCTAGATCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGATCTAGGCAGTTTTaGGTTGTAGGTTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRSRQF*VVGSLC
Trigger: ACAGAGGGAACCTACAACCAAAAACTGCCTAGATCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAAGAACACAAATTTCTaGCCCCTTACATTACAATGG +
Preference number: 3 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAKNTNF*PLTLQW
Trigger: CCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCTT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGAGAAATGCCATCATTaGGGGACCACAAAGGTAAAG +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLEKCHH*GTTKVK
Trigger: CTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR GCA 72 bp GACTATCAGAAACTCCTTCCAATGGAGCACGTAACCTaGTTCATCTTCAGTCTTGATGAGTGTCACTATGCA +
Preference number: 3 (lower is better)
Translates to: DYQKLLPMEHVT*FIFSLDECHYA
Trigger: TGCATAGTGACACTCATCAAGACTGAAGATGAAGCAGGTTACGTGCTCCATTGGAAGGAGTTTCTGATAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAGGACCACCCAGTTGTaGTTAAAAGGCTGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSARTTQL*LKGCCE
Trigger: TTCACAGCAGCCTTTTAACAACAACTGGGTGGTCCT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCACAAGGACCACCCAGTaGTTGTTAAAAGGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSATRTTQ*LLKGCC
Trigger: ACAGCAGCCTTTTAACAACAACTGGGTGGTCCTTGT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTTAAAGGTAACCTCCTaGAGAGCAAGAACAGACCTT +
Preference number: 3 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLKVTS*RARTDL
Trigger: AAGGTCTGTTCTTGCTCTCAAGGAGGTTACCTTTAA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCTGTCCTGCAACACTaGAATTCCTTTCACAAACAC +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSVLQH*NSFHKH
Trigger: GTGTTTGTGAAAGGAATTCAAGTGTTGCAGGACAGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAGATCTAGGCAGTTTTaGGTTGTAGGTTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKRSRQF*VVGSLC
Trigger: ACAGAGGGAACCTACAACCAAAAACTGCCTAGATCT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCTTCATCTTCAGTCTaGATGAGTGTCACTATGCAG +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKASSSV*MSVTMQ
Trigger: CTGCATAGTGACACTCATCAAGACTGAAGATGAAGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGCTTCATCTTCAGTCTaGATGAGTGTCACTATGCAG +
Preference number: 3 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAASSSV*MSVTMQ
Trigger: CTGCATAGTGACACTCATCAAGACTGAAGATGAAGC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATACTTCATCACAAGGATaGTTTCAGCCTCATAGTATC +
Preference number: 3 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHTSSQG*FQPHSI
Trigger: GATACTATGAGGCTGAAACAATCCTTGTGATGAAGT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 72 bp GATTATGCAAGAAAGTTACTCACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTTAGAGAAGCCGACTTT +
Preference number: 3 (lower is better)
Translates to: DYARKLLTQTQM*RNQWFFREADF
Trigger: AAAGTCGGCTTCTCTAAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGTGAGTAACTTTCTTGCATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 72 bp GCTATGTCCTGGAGGATATTGTATACTGGGAGCAACTaGCGAAATCCCCTTACAGTTTATATTTCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: AMSWRILYTGSN*RNPLTVYISVL
Trigger: CAGAACTGAAATATAAACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATACAATATCCTCCAGGACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 72 bp GAGATTTCTGGCTATGTCCTGGAGGATATTGTATACTaGGAGCAACTGACGAAATCCCCTTACAGTTTATAT +
Preference number: 3 (lower is better)
Translates to: EISGYVLEDIVY*EQLTKSPYSLY
Trigger: ATATAAACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATACAATATCCTCCAGGACATAGCCAGAAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTCAATGCAGACATATaGCTGGAGCCTGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSFNADI*LEPVLW
Trigger: CCAGAGCACAGGCTCCAGCAATATGTCTGCATTGAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGAAATCCTAGTGCAGTaGTTACTCTCTTCAGCGTTT +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKEILVQ*LLSSAF
Trigger: AAACGCTGAAGAGAGTAACAACTGCACTAGGATTTC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGATTTACAGAACAGATTaGGGGATAGTAACTACCCAA +
Preference number: 3 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLIYRTD*GIVTTQ
Trigger: TTGGGTAGTTACTATCCCCAAATCTGTTCTGTAAAT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTAAAGGTAACCTCCTaGAGAGCAAGAACAGACCTT +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLKVTS*RARTDL
Trigger: AAGGTCTGTTCTTGCTCTCAAGGAGGTTACCTTTAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR TCA 72 bp TACAAGGACCACCCAGTTGTTGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTCAATGCCTTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: YKDHPVVVKRLL*TFQRYVNAFCD
Trigger: ATCACAAAAGGCATTGACGTATCTTTGAAATGTTCACAGCAGCCTTTTAACAACAACTGGGTGGTCCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 72 bp AAATATTACTTGTACTTGAATCCTTCAAGCCTCTGTTaGTCTAACTGCCATTTCACTGCCTTTCTCTACTCC +
Preference number: 3 (lower is better)
Translates to: KYYLYLNPSSLC*SNCHFTAFLYS
Trigger: GGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACAGAGGCTTGAAGGATTCAAGTACAAGTAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCATTTTTACCTGTGTaGCTAAATCAGTTCATGAAG +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKAFLPV*LNQFMK
Trigger: CTTCATGAACTGATTTAGCAACACAGGTAAAAATGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGCATTTTTACCTGTGTaGCTAAATCAGTTCATGAAG +
Preference number: 3 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAAFLPV*LNQFMK
Trigger: CTTCATGAACTGATTTAGCAACACAGGTAAAAATGC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTTTCAGGCTTCTACTaGAGTAACCTTGATTATGCA +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFSGFY*SNLDYA
Trigger: TGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAAGAACACAAATTTCTaGCCCCTTACATTACAATGG +
Preference number: 3 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAKNTNF*PLTLQW
Trigger: CCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCTT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGATTTACAGAACAGATTaGGGGATAGTAACTACCCAA +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKIYRTD*GIVTTQ
Trigger: TTGGGTAGTTACTATCCCCAAATCTGTTCTGTAAAT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGATGCCTTTTGTGATATaGAATCACTGGCTTTCTCTA +
Preference number: 3 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKMPFVI*NHWLSL
Trigger: TAGAGAAAGCCAGTGATTCAATATCACAAAAGGCAT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CCA 72 bp GATTCTATAAAAATTACCACATACTTCAGTTCTTCGTaGCATAAAGCACATAACTGCAAAGATCTAGGCAGT +
Preference number: 3 (lower is better)
Translates to: DSIKITTYFSSS*HKAHNCKDLGS
Trigger: ACTGCCTAGATCTTTGCAGTTATGTGCTTTATGCCACGAAGAACTGAAGTATGTGGTAATTTTTATAGAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGGCCCCAGCCCCACCTaGGGTCCCGTTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAGPSPT*GPVGLG
Trigger: ACCCAGACCAACGGGACCGCAGGTGGGGCTGGGGCC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCTGTGCTGCAACCCTaGTCCGGTGCCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAVLQP*SGAPDP
Trigger: GGGGTCGGGGGCACCGGAGCAGGGTTGCAGCACAGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCGCCCCCACAAAGCATaGGCGCCTGCGTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKARPHKA*APAYQG
Trigger: GCCCTGGTACGCAGGCGCGCATGCTTTGTGGGGGCG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTGCTCTGGGCTGGGCTaGCCTGGCCCAACGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKACSGLG*PGPTGA
Trigger: AGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGGGGCTGTGGGCTGCTaGTGCTGGTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAGAVGC*CWFCCC
Trigger: ACAGCAGCAGAACCAGCATCAGCAGCCCACAGCCCC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGTCTGGGTGCTGTTCTaGTGTGGTGGGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAVWVLF*CGGGAC
Trigger: ACAGGCGCCCCCACCACAGCAGAACAGCACCCAGAC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCTGTGCTGCAACCCTaGTCCGGTGCCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAVLQP*SGAPDP
Trigger: GGGGTCGGGGGCACCGGAGCAGGGTTGCAGCACAGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLACALG*AGLAQR
Trigger: CCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTCGTCCTGCACTCCATaGAGCAGGCCTCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASSCTP*SRPRWG
Trigger: ACCCCAGCGAGGCCTGCTCCATGGAGTGCAGGACGA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGCCAGACGTGGTGGTaGGTGCCCGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKASQTWW*VPVVPA
Trigger: AGCTGGGACTACGGGCACGCACCACCACGTCTGGCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCAGGCCTCGCTGGGGTaGAGCGGCTCTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAQASLG*SGSEHK
Trigger: TTTGTGCTCAGAGCCGCTGCACCCCAGCGAGGCCTG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCTGTGGAGGGGCTGTaGGCTGCTGATGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAAVEGL*AADAGS
Trigger: AGAACCAGCATCAGCAGCCCACAGCCCCTCCACAGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCTGTTCTGCTGTGGTaGGGGCGCCTGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAVLLW*GRLWRG
Trigger: GCCCCTCCACAGGCGCCCCCACCACAGCAGAACAGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCGGTCCCGTTGGTCTaGGTGCTGTTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAAVPLV*VLFCCG
Trigger: ACCACAGCAGAACAGCACCCAGACCAACGGGACCGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCACCTGCGGTCCCGTTaGTCTGGGTGCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAHLRSR*SGCCSA
Trigger: AGCAGAACAGCACCCAGACCAACGGGACCGCAGGTG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTGGGCTGGGCTGGCCTaGCCCAACGGGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLWAGLA*PNGSWS
Trigger: TGACCAGCTCCCGTTGGGCCAGGCCAGCCCAGCCCA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCCTTGTTTTGGAACCTaGTGGGCCGCGCCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAPCFGT*WAAPWL
Trigger: AAGCCACGGCGCGGCCCACCAGGTTCCAAAACAAGG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTACCGGTGGGCCTGGTaGGATGGGTGGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAYRWAW*DGWYCE
Trigger: CTCACAGTACCACCCATCTCACCAGGCCCACCGGTA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAGCAGTAGCTCGTCCTaGACTCCATGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASSSSS*TPWSRP
Trigger: AGGCCTGCTCCATGGAGTGCAGGACGAGCTACTGCT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGACGTGACCGTAGGTaGCGCGTCCCACTTTGCACC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKARRDRR*RVPLCT
Trigger: GGTGCAAAGTGGGACGCGGCACCTACGGTCACGTCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCGGTCCCGTTGGTCTaGGTGCTGTTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAVPLV*VLFCCG
Trigger: ACCACAGCAGAACAGCACCCAGACCAACGGGACCGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCACCTGCGGTCCCGTTaGTCTGGGTGCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAHLRSR*SGCCSA
Trigger: AGCAGAACAGCACCCAGACCAACGGGACCGCAGGTG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGGCTTTGTTCCCAACTaGGTGCGGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAGFVPN*VRWLTP
Trigger: AGGTGTGAGCCACCGCACCCAGTTGGGAACAAAGCC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTGTTTTGGAACCTGGTaGGCCGCGCCGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKACFGTW*AAPWLP
Trigger: AGGAAGCCACGGCGCGGCCCACCAGGTTCCAAAACA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCGGATGACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAADDLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCTCACCTCAGGTCATCCGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAGAGGTCCCACGGTTTaGGGGCCCTTACGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYARGPTV*GPLRVL
Trigger: TAACACACGTAAGGGCCCTCAAACCGTGGGACCTCT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCTGGAGTCCTGGCTGTaGTGCAACCCTGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLLESWL*CNPAPV
Trigger: CACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTGGAGTCCTGGCTGTaGTGCAACCCTGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLESWL*CNPAPV
Trigger: CACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTCACAATGGAACACATaGAGGGAAGGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASQWNT*REGVLG
Trigger: CCCCAGCACCCCTTCCCTGCATGTGTTCCATTGTGA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGCCAGACGTGGTGGTaGGTGCCCGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSQTWW*VPVVPA
Trigger: AGCTGGGACTACGGGCACGCACCACCACGTCTGGCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCCGTGGCTTCTTGTTTaGAGGCACCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAPWLLV*RHLVQA
Trigger: AGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTGGGCTGGGCTGGCCTaGCCCAACGGGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAWAGLA*PNGSWS
Trigger: TGACCAGCTCCCGTTGGGCCAGGCCAGCCCAGCCCA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGCTCTGGGCTGGGCTaGCCTGGCCCAACGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKCSGLG*PGPTGA
Trigger: AGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTGCTCTGGGCTGGGCTaGCCTGGCCCAACGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSACSGLG*PGPTGA
Trigger: AGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCGTCCTGCACTCCATaGAGCAGGCCTCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSSCTP*SRPRWG
Trigger: ACCCCAGCGAGGCCTGCTCCATGGAGTGCAGGACGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTACCGGTGGGCCTGGTaGGATGGGTGGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHYRWAW*DGWYCE
Trigger: CTCACAGTACCACCCATCTCACCAGGCCCACCGGTA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCAAAGCATGCGCGCCTaGGTACCAGGGCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYQSMRA*VPGPPL
Trigger: GAGGGGCGGCCCTGGTACGCAGGCGCGCATGCTTTG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTCCCGTTGGTCTGGGTaGTGTTCTGCTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSRWSG*CSAVVG
Trigger: CCCCACCACAGCAGAACAGCACCCAGACCAACGGGA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGAGTCCTGGCTGTGCTaGAACCCTGCTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAESWLC*NPAPVP
Trigger: GGGCACCGGAGCAGGGTTGCAGCACAGCCAGGACTC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTATTGCTGGAGCCTGTaGTCTGGGCTGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLYCWSL*SGLGWP
Trigger: AGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCTGTGGAGGGGCTGTaGGCTGCTGATGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAVEGL*AADAGS
Trigger: AGAACCAGCATCAGCAGCCCACAGCCCCTCCACAGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCTGTTCTGCTGTGGTaGGGGCGCCTGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYAVLLW*GRLWRG
Trigger: GCCCCTCCACAGGCGCCCCCACCACAGCAGAACAGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGGTGCTGTTCTGCTGTaGTGGGGGCGCCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKGAVLL*WGRLWR
Trigger: CCTCCACAGGCGCCCCCACCACAGCAGAACAGCACC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGGTGCTGTTCTGCTGTaGTGGGGGCGCCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAGAVLL*WGRLWR
Trigger: CCTCCACAGGCGCCCCCACCACAGCAGAACAGCACC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGGCCCAACGGGAGCTaGTCAGTACCGGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKWPNGS*SVPVGL
Trigger: CAGGCCCACCGGTACTGACCAGCTCCCGTTGGGCCA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTGGCCCAACGGGAGCTaGTCAGTACCGGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAWPNGS*SVPVGL
Trigger: CAGGCCCACCGGTACTGACCAGCTCCCGTTGGGCCA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCAGGGAAGGGGTGCTaGGGAAACTTCACAAGAATC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAAGKGC*GNFTRI
Trigger: GATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCTGGAAGGTGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKALEGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTCCAACCTCCACCTTCCAG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGGATCCTGCAGAGCTTaGTCCGAGGTAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAGSCRA*SEVILL
Trigger: CAAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGTCTGGGTGCTGTTCTaGTGTGGTGGGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAVWVLF*CGGGAC
Trigger: ACAGGCGCCCCCACCACAGCAGAACAGCACCCAGAC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGTCTGGGTGCTGTTCTaGTGTGGTGGGGGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKVWVLF*CGGGAC
Trigger: ACAGGCGCCCCCACCACAGCAGAACAGCACCCAGAC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGCCCCAGCCCCACCTaGGGTCCCGTTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGPSPT*GPVGLG
Trigger: ACCCAGACCAACGGGACCGCAGGTGGGGCTGGGGCC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGAGTCCTGGCTGTGCTaGAACCCTGCTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYESWLC*NPAPVP
Trigger: GGGCACCGGAGCAGGGTTGCAGCACAGCCAGGACTC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTCAATGCAGACATATTaGTGGAGCCTGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASMQTY*WSLCSG
Trigger: CCCAGAGCACAGGCTCCAGCAATATGTCTGCATTGA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCAGGCCTCGCTGGGGTaGAGCGGCTCTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAQASLG*SGSEHK
Trigger: TTTGTGCTCAGAGCCGCTGCACCCCAGCGAGGCCTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGCAGTAGCTCGTCCTaGACTCCATGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSSSSS*TPWSRP
Trigger: AGGCCTGCTCCATGGAGTGCAGGACGAGCTACTGCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTGGCCCAACGGGAGCTaGTCAGTACCGGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYWPNGS*SVPVGL
Trigger: CAGGCCCACCGGTACTGACCAGCTCCCGTTGGGCCA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSACALG*AGLAQR
Trigger: CCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGGCTTTGTTCCCAACTaGGTGCGGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLGFVPN*VRWLTP
Trigger: AGGTGTGAGCCACCGCACCCAGTTGGGAACAAAGCC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCACAAACCTCGCAGTaGAGCACGAAAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAAQTSQ*STKSYS
Trigger: ACTGTAGCTTTTCGTGCTCCACTGCGAGGTTTGTGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCGTCCTGCACTCCATaGAGCAGGCCTCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASSCTP*SRPRWG
Trigger: ACCCCAGCGAGGCCTGCTCCATGGAGTGCAGGACGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTACCTTCCTGTCACTGTaGGAAAGGAACACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKATFLSL*ERNTFC
Trigger: GCAGAAGGTGTTCCTTTCTCACAGTGACAGGAAGGT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGGGGCTGTGGGCTGCTaGTGCTGGTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYGAVGC*CWFCCC
Trigger: ACAGCAGCAGAACCAGCATCAGCAGCCCACAGCCCC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCCCATATATCTATTTTaGCTCTCCCCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAPIYLF*LSPSQD
Trigger: GTCCTGAGAGGGGGAGAGTCAAAATAGATATATGGG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCCCGTTGGTCTGGGTaGTGTTCTGCTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASRWSG*CSAVVG
Trigger: CCCCACCACAGCAGAACAGCACCCAGACCAACGGGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCTGGAGTCCTGGCTGTaGTGCAACCCTGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYLESWL*CNPAPV
Trigger: CACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTATTGCTGGAGCCTGTaGTCTGGGCTGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKYCWSL*SGLGWP
Trigger: AGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAAGAGCCAGTACCAGTaGAGGGATAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAKSQYQ*RDRNSV
Trigger: GACTGAGTTCCTATCCCTGCACTGGTACTGGCTCTT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAGCCAGACGTGGTGGTaGGTGCCCGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYSQTWW*VPVVPA
Trigger: AGCTGGGACTACGGGCACGCACCACCACGTCTGGCT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCAGGCCTCGCTGGGGTaGAGCGGCTCTGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYQASLG*SGSEHK
Trigger: TTTGTGCTCAGAGCCGCTGCACCCCAGCGAGGCCTG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCTGTGGAGGGGCTGTaGGCTGCTGATGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKAVEGL*AADAGS
Trigger: AGAACCAGCATCAGCAGCCCACAGCCCCTCCACAGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCTGTTCTGCTGTGGTaGGGGCGCCTGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSAVLLW*GRLWRG
Trigger: GCCCCTCCACAGGCGCCCCCACCACAGCAGAACAGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTGTTTGGAGGCACCTaGTTCAGGCTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLLFGGT*FRLESW
Trigger: CCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCCGTGGCTTCTTGTTTaGAGGCACCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHPWLLV*RHLVQA
Trigger: AGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAATTCAGGCGAGAACTaGAGTGCTGATAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYANSGEN*SADNPR
Trigger: CCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCACAAACCTCGCAGTaGAGCACGAAAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAQTSQ*STKSYS
Trigger: ACTGTAGCTTTTCGTGCTCCACTGCGAGGTTTGTGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTACCGGTGGGCCTGGTaGGATGGGTGGTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYYRWAW*DGWYCE
Trigger: CTCACAGTACCACCCATCTCACCAGGCCCACCGGTA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAACAGCTCTGGACAGTaGGGCTTTAGGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLNSSGQ*GFRAQD
Trigger: ATCCTGTGCCCTAAAGCCTCACTGTCCAGAGCTGTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAACAGCTCTGGACAGTaGGGCTTTAGGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHNSSGQ*GFRAQD
Trigger: ATCCTGTGCCCTAAAGCCTCACTGTCCAGAGCTGTT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGAGTCCTGGCTGTGCTaGAACCCTGCTCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSESWLC*NPAPVP
Trigger: GGGCACCGGAGCAGGGTTGCAGCACAGCCAGGACTC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCATGCAGGGAAGGGGTaGTGGGGAAACTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLHAGKG*WGNFTR
Trigger: TCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGCATG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAGCAGTAGCTCGTCCTaGACTCCATGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSSSSS*TPWSRP
Trigger: AGGCCTGCTCCATGGAGTGCAGGACGAGCTACTGCT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHCRVPL*TLRTQT
Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAGACGTGACCGTAGGTaGCGCGTCCCACTTTGCACC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYRRDRR*RVPLCT
Trigger: GGTGCAAAGTGGGACGCGGCACCTACGGTCACGTCT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKASEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTTCAGCGTTTTGGTGTaGGCCATCGAGACTGTACAA +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAFSVLV*AIETVQ
Trigger: TTGTACAGTCTCGATGGCCCACACCAAAACGCTGAA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTCTCTTCAGCGTTTTaGTGTGGGCCATCGAGACTG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLSSAF*CGPSRL
Trigger: CAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAGATCAGTAAGGTCCTaGCTGGCTACAGTATCACAT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYARSVRS*LATVSH
Trigger: ATGTGATACTGTAGCCAGCCAGGACCTTACTGATCT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTCATTTCCTTGTTTTaGAACCTGGTGGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLFISLF*NLVGRA
Trigger: GGCGCGGCCCACCAGGTTCCAAAACAAGGAAATGAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCTACCTCCAACGCTTaGGGTCCATACACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYATSNA*GPYTKP
Trigger: GGGCTTCGTGTATGGACCTCAAGCGTTGGAGGTAGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCATCTTTTCTTCTGCTaGAAAGTCTGCTACCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAHLFFC*KVCYLQ
Trigger: TTGGAGGTAGCAGACTTTTCAGCAGAAGAAAAGATG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGACCTTCCTGTCACTGTaGGAAAGGAACACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLTFLSL*ERNTFC
Trigger: GCAGAAGGTGTTCCTTTCTCACAGTGACAGGAAGGT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTATGGTCAGGAGTTTCTaGAGCAAGAGGAACACTTTG +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAMVRSF*SKRNTL
Trigger: CAAAGTGTTCCTCTTGCTTCAGAAACTCCTGACCAT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGGGCTGTGGGCTGCTaGTGCTGGTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGAVGC*CWFCCC
Trigger: ACAGCAGCAGAACCAGCATCAGCAGCCCACAGCCCC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAGATGGGTGGTACTGTaGGCTCTGCTGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSARWVVL*ALLRRG
Trigger: TCCTCGTCTCAGCAGAGCTCACAGTACCACCCATCT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAGATGGGTGGTACTGTaGGCTCTGCTGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKRWVVL*ALLRRG
Trigger: TCCTCGTCTCAGCAGAGCTCACAGTACCACCCATCT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCTATTCAGAATAAGATaGTGCTGGGAACTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYALFRIR*CWELSS
Trigger: GGAACTGAGTTCCCAGCATCATCTTATTCTGAATAG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTACGCAGACCCAGATGTaGAGAAACCAATGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKATQTQM*RNQWFF
Trigger: AAAGAACCATTGGTTTCTTCACATCTGGGTCTGCGT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCACCAGGCACATGGTaGGGGTGCAATAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKAPGTW*GCNKHL
Trigger: CAGATGCTTATTGCACCCTCACCATGTGCCTGGTGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTATACTGGGAGCAACTaGCGAAATCCCCTTACAGTT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAYTGSN*RNPLTV
Trigger: AACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCAATTCTCGCAAAAGTaGAATCTCTCTACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAQFSQK*NLSTSR
Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGCGAGAATTG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGTGAAGCACCCAATTTaGATGGAGGTAATGGATACC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAVKHPI*MEVMDT
Trigger: GGTATCCATTACCTCCATGCAAATTGGGTGCTTCAC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAAGAGTAGCCAAGTGTaGTCTGGGACTGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLKSSQV*SGTERI
Trigger: GATCCTCTCAGTCCCAGAGCACACTTGGCTACTCTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCAATGCAGACATATTaGTGGAGCCTGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSMQTY*WSLCSG
Trigger: CCCAGAGCACAGGCTCCAGCAATATGTCTGCATTGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAAGAGCCAGTACCAGTaGAGGGATAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLKSQYQ*RDRNSV
Trigger: GACTGAGTTCCTATCCCTGCACTGGTACTGGCTCTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGAACAAGTAGCAGTTaGTTCACCAGGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKARTSSS*FTRNEA
Trigger: TGCCTCATTCCTGGTGAAGCAACTGCTACTTGTTCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTACACGAAGCCCTCCTaGAATCTCGGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYYTKPS*NLGPPQ
Trigger: CTGTGGTGGCCCGAGATTCCAGGAGGGCTTCGTGTA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTCTTGGTTGGATCCATaGTCAGGAGTTTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKASWLDP*SGVSEA
Trigger: TGCTTCAGAAACTCCTGACCATGGATCCAACCAAGA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTGTTTGGAGGCACCTaGTTCAGGCTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLFGGT*FRLESW
Trigger: CCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCCGTGGCTTCTTGTTTaGAGGCACCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAPWLLV*RHLVQA
Trigger: AGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGAGGATATTGTATACTaGGAGCAACTGACGAAATCC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAEDIVY*EQLTKS
Trigger: GGATTTCGTCAGTTGCTCCCAGTATACAATATCCTC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTTTCTGGCTATGTCCTaGAGGATATTGTATACTGGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAFLAMS*RILYTG
Trigger: CCCAGTATACAATATCCTCCAGGACATAGCCAGAAA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCTGGAAGGTGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSALEGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTCCAACCTCCACCTTCCAG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCAGAAAGCCTTCACTTaGATTCATTCCTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAQKAFT*IHSFLS
Trigger: TGACAGGAAGGAATGAATCCAAGTGAAGGCTTTCTG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCCTTCAAGCCTCTGTTaGTCTAACTGCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAPSSLC*SNCHFT
Trigger: AGTGAAATGGCAGTTAGACCAACAGAGGCTTGAAGG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCGCTTTTGATGCACGGTaGAACTTAATAATATGCCAC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAAFDAR*NLIICH
Trigger: GTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGGTTTCAAGTCTCTGTaGAGCACCCAATTTGCATGG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHGFKSL*STQFAW
Trigger: CCATGCAAATTGGGTGCTTCACAGAGACTTGAAACC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCCATGTCAGCTATTTTaGCTCTCCCCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAPCQLF*LSPSQD
Trigger: GTCCTGAGAGGGGGAGAGTCAAAATAGCTGACATGG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTTCTGCTGCTGTTGCTaGTTCTTGTCACCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAFCCCC*FLSPFS
Trigger: AGAAAAAGGTGACAAGAATCAGCAACAGCAGCAGAA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAAAGCTACCTTACCTTaGGCTCATCTGTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHKATLP*AHLSCN
Trigger: GTTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGCACCAAGCAAAAGTTCTGGAGCCCGATACCAAAATGTCACAACTACTGGATCGTGAAGCACCCAATTTaGATGGAGGTAATGGATACC +
Preference number: 4 (lower is better)
Translates to: CTKQKFWSPIPKCHNYWIVKHPI*MEVMDT
Trigger: GGTATCCATTACCTCCATGCAAATTGGGTGCTTCAC...GATCCAGTAGTTGTGACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCTTTGTATAATGCCTTaGACCAAGCAAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYALCIMP*TKQKFW
Trigger: CCAGAACTTTTGCTTGGTGCAAGGCATTATACAAAG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCCCGTTGGTCTGGGTaGTGTTCTGCTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSRWSG*CSAVVG
Trigger: CCCCACCACAGCAGAACAGCACCCAGACCAACGGGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTACATATCACCCCTTTaGAGTGATAGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAYISPL*SDSIEE
Trigger: CTCTTCTATGCTATCACTGCAAAGGGGTGATATGTA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCATGCAGACATATTGCTaGAGCCTGTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAMQTYC*SLCSGL
Trigger: CAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCAT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCAGGGAAGGGGTGCTaGGGAAACTTCACAAGAATC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKAGKGC*GNFTRI
Trigger: GATTCTTGTGAAGTTTCCCCAGCACCCCTTCCCTGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTGTAAGTCAATCACATaGCACAGACATCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHCKSIT*HRHPRR
Trigger: CCTCCTGGGATGTCTGTGCCATGTGATTGACTTACA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGAACTCAGTCATGTGTaGAATGGAGATTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAELSHV*NGDFWL
Trigger: TAGCCAGAAATCTCCATTCCACACATGACTGAGTTC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGACCTTCCTGTCACTGTaGGAAAGGAACACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKTFLSL*ERNTFC
Trigger: GCAGAAGGTGTTCCTTTCTCACAGTGACAGGAAGGT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCTTTTGATGCACGGTaGAACTTAATAATATGCCAC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAFDAR*NLIICH
Trigger: GTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCTCCATGTACTTTATaGGGCTACTGTTGGCATACG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSPCTL*GYCWHT
Trigger: CGTATGCCAACAGTAGCCTCATAAAGTACATGGAGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGATGGTCAGGAGTTTCTaGAGCAAGAGGAACACTTTG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLMVRSF*SKRNTL
Trigger: CAAAGTGTTCCTCTTGCTTCAGAAACTCCTGACCAT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCCTTCAAAGAAATGCTaGAGGTTACAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLPSKKC*RLQKCW
Trigger: CCAGCACTTCTGTAACCTTCAGCATTTCTTTGAAGG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAACAGGGTAGTTCTGTaGATGTATAAGCGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKANRVVL*MYKRKN
Trigger: GTTCTTACGCTTATACATTCACAGAACTACCCTGTT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCACATGGATATTCCTGTaGCTTCAATTTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYATWIFL*LQFASM
Trigger: CATTGAAGCAAATTGAAGGCACAGGAATATCCATGT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGCACCAAGCAAAAGTTCTGGAGCCCGATACCAAAATGTCACAACTACTGGATCCAATTCTCGCAAAAGTaGAATCTCTCTACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: CTKQKFWSPIPKCHNYWIQFSQK*NLSTSR
Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGCGAGAATTG...GATCCAGTAGTTGTGACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCAATCACATTAGGGTaGTTCAATTCTCGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAITLG*FNSRKS
Trigger: ACTTTTGCGAGAATTGAAGCACCCTAATGTGATTGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp GCCTTGCACCAAGCAAAAGTTCTGGAGCCCGATACCAAAATGTCACAACTACTGGCAATCACATTAGGGTaGTTCAATTCTCGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ALHQAKVLEPDTKMSQLLAITLG*FNSRKS
Trigger: ACTTTTGCGAGAATTGAAGCACCCTAATGTGATTGC...CAGTAGTTGTGACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGTGCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCCACAAGTCATGCTCTaGATAATCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHPQVML*IIKQQP
Trigger: TGGCTGCTGTTTGATTATGCAGAGCATGACTTGTGG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCCACAAGTCATGCTCTaGATAATCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLPQVML*IIKQQP
Trigger: TGGCTGCTGTTTGATTATGCAGAGCATGACTTGTGG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAAGAGTAGCCAAGTGTaGTCTGGGACTGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKKSSQV*SGTERI
Trigger: GATCCTCTCAGTCCCAGAGCACACTTGGCTACTCTT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTTTGGTTCTTTTCAATaGAGACATATTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAFGSFQ*RHIAGA
Trigger: GGCTCCAGCAATATGTCTGCATTGAAAAGAACCAAA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCATCAGTCCTGCACAATaGTCAGTATATAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAISPAQ*SVYKVF
Trigger: GAAAACCTTATATACTGAGCATTGTGCAGGACTGAT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAGAACACAAATTTCTTaGCCCTTACATTACAATGGG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYARTQIS*PLHYNG
Trigger: CCCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCACAAAGGTAAAGTTTaGCCTCAAAAAGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAHKGKV*PQKASK
Trigger: CTTTGAAGCTTTTTGAGGGCAAACTTTACCTTTGTG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAATTTCAAAGAGAAATaGCATCATTTGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYANFKEK*HHLGTT
Trigger: TGTGGTCCCCAAATGATGGCATTTCTCTTTGAAATT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGAACAAGTAGCAGTTaGTTCACCAGGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRTSSS*FTRNEA
Trigger: TGCCTCATTCCTGGTGAAGCAACTGCTACTTGTTCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCATCTTGGCAACTGCATaGGCTTTTTATTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAILATA*AFYLLL
Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTGCCAAGAT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTCTTGGTTGGATCCATaGTCAGGAGTTTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLSWLDP*SGVSEA
Trigger: TGCTTCAGAAACTCCTGACCATGGATCCAACCAAGA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTACTTCAGTTCTTCGTaGCATAAAGCACATAACTGC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAYFSSS*HKAHNC
Trigger: GCAGTTATGTGCTTTATGCCACGAAGAACTGAAGTA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCAGTCATGTGTGGAATaGAGATTTCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLQSCVE*RFLAMS
Trigger: GGACATAGCCAGAAATCTCCATTCCACACATGACTG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGGTAAAGGGAATCAGTaGGTAGCACGAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYGKGNQ*VARTLR
Trigger: CCTCAGGGTTCGTGCTACCCACTGATTCCCTTTACC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGGTTTCAAGTCTCTGTaGAGCACCCAATTTGCATGG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKGFKSL*STQFAW
Trigger: CCATGCAAATTGGGTGCTTCACAGAGACTTGAAACC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCGGATGACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSADDLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCTCACCTCAGGTCATCCGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAAAGCTACCTTACCTTaGGCTCATCTGTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKKATLP*AHLSCN
Trigger: GTTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCCGCCAGCTTCGCCTTaGAATCATAATCCATTGTCT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAPPASP*NHNPLS
Trigger: AGACAATGGATTATGATTTCAAGGCGAAGCTGGCGG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCAATTCTCGCAAAAGTaGAATCTCTCTACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHQFSQK*NLSTSR
Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGCGAGAATTG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGAAAGGAACACCTTCTaGAATGCAATCACATTAGGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLERNTF*NAITLG
Trigger: CCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTATAGATCTTGGCAACTaGATGGGCTTTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAIDLGN*MGFLFA
Trigger: AGCAAATAAAAAGCCCATGCAGTTGCCAAGATCTAT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAGGATCCCTGAACGCTaGTTTGGTAATTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYRIPER*FGNSGE
Trigger: CTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATATGGAGCACGTAACCTaGTTCATCTTCAGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHMEHVT*FIFSLD
Trigger: ATCAAGACTGAAGATGAAGCAGGTTACGTGCTCCAT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCACCTTCTATTTTCCTTaGAATTTCCTACAACCACTT +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYATFYFP*NFLQPL
Trigger: AAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAAGTGTGGGATATTCTaGCATCTTTCTAATATCTTC +
Preference number: 4 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAKCGIF*HLSNIF
Trigger: GAAGATATTAGAAAGATGCCAGAATATCCCACACTT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGGTAATTCTCTTGGTTaGATCCATGGTCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLGNSLG*IHGQEF
Trigger: AAACTCCTGACCATGGATCCAACCAAGAGAATTACC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGGTAATTCTCTTGGTTaGATCCATGGTCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHGNSLG*IHGQEF
Trigger: AAACTCCTGACCATGGATCCAACCAAGAGAATTACC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTGGGGTATGGAATCTaGCAGCCGGCAAATACATCT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSALGYGI*QPANTS
Trigger: AGATGTATTTGCCGGCTGCCAGATTCCATACCCCAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTGTTTGGAGGCACCTaGTTCAGGCTGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLFGGT*FRLESW
Trigger: CCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGAATTCAGGCGAGAACTaGAGTGCTGATAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKNSGEN*SADNPR
Trigger: CCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCAGAGAAGTCACAATaGAACACATGCAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASEKSQ*NTCREG
Trigger: CCCTTCCCTGCATGTGTTCCATTGTGACTTCTCTGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTGGAATGGAGATTTCTaGCTATGTCCTGGAGGATAT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHWNGDF*LCPGGY
Trigger: ATATCCTCCAGGACATAGCCAGAAATCTCCATTCCA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCACAAACCTCGCAGTaGAGCACGAAAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYAQTSQ*STKSYS
Trigger: ACTGTAGCTTTTCGTGCTCCACTGCGAGGTTTGTGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGGTTTCAAGTCTCTGTaGAGCACCCAATTTGCATGG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYGFKSL*STQFAW
Trigger: CCATGCAAATTGGGTGCTTCACAGAGACTTGAAACC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTTCTAAAGTCTTTTTaGAGTGTGGGATATTCTGGC +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLLKSF*SVGYSG
Trigger: GCCAGAATATCCCACACTTCAAAAAGACTTTAGAAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCTTCTAAAGTCTTTTTaGAGTGTGGGATATTCTGGC +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLLLKSF*SVGYSG
Trigger: GCCAGAATATCCCACACTTCAAAAAGACTTTAGAAG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGATGGTCAGGAGTTTCTaGAGCAAGAGGAACACTTTG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKMVRSF*SKRNTL
Trigger: CAAAGTGTTCCTCTTGCTTCAGAAACTCCTGACCAT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCCTTCAAAGAAATGCTaGAGGTTACAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAPSKKC*RLQKCW
Trigger: CCAGCACTTCTGTAACCTTCAGCATTTCTTTGAAGG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTATACTGGGAGCAACTaGCGAAATCCCCTTACAGTT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAYTGSN*RNPLTV
Trigger: AACTGTAAGGGGATTTCGTCAGTTGCTCCCAGTATA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTGTATGTCACTGCATaGTCTACTTCATCACAAGGA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLLYVTA*STSSQG
Trigger: TCCTTGTGATGAAGTAGATCATGCAGTGACATACAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTCCACAAGTCATGCTCTaGATAATCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGIPQVML*IIKQQP
Trigger: TGGCTGCTGTTTGATTATGCAGAGCATGACTTGTGG...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGTGAAGCACCCAATTTaGATGGAGGTAATGGATACC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKVKHPI*MEVMDT
Trigger: GGTATCCATTACCTCCATGCAAATTGGGTGCTTCAC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTACATATCACCCCTTTaGAGTGATAGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHYISPL*SDSIEE
Trigger: CTCTTCTATGCTATCACTGCAAAGGGGTGATATGTA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSCRVPL*TLRTQT
Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGCACCAAGCAAAAGTTCTGGAGCCCGATACCAAAATGTCACAACTACTGGATCATCTTGGCAACTGCATaGGCTTTTTATTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CTKQKFWSPIPKCHNYWIILATA*AFYLLL
Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTGCCAAGAT...GATCCAGTAGTTGTGACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR CCA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAAGTGTGGGATATTCTaGCATCTTTCTAATATCTTC +
Preference number: 4 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAKCGIF*HLSNIF
Trigger: GAAGATATTAGAAAGATGCCAGAATATCCCACACTT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTCTTGGTTGGATCCATaGTCAGGAGTTTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSWLDP*SGVSEA
Trigger: TGCTTCAGAAACTCCTGACCATGGATCCAACCAAGA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTTGGGGTATGGAATCTaGCAGCCGGCAAATACATCT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYLGYGI*QPANTS
Trigger: AGATGTATTTGCCGGCTGCCAGATTCCATACCCCAA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAATTCAGGCGAGAACTaGAGTGCTGATAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYNSGEN*SADNPR
Trigger: CCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTGTAAGTCAATCACATaGCACAGACATCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYCKSIT*HRHPRR
Trigger: CCTCCTGGGATGTCTGTGCCATGTGATTGACTTACA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCAGTCATGTGTGGAATaGAGATTTCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAQSCVE*RFLAMS
Trigger: GGACATAGCCAGAAATCTCCATTCCACACATGACTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGTAAAGGGAATCAGTaGGTAGCACGAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGKGNQ*VARTLR
Trigger: CCTCAGGGTTCGTGCTACCCACTGATTCCCTTTACC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTCTCCATGTACTTTATaGGGCTACTGTTGGCATACG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYSPCTL*GYCWHT
Trigger: CGTATGCCAACAGTAGCCTCATAAAGTACATGGAGA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTCTGCTGCTGTTGCTaGTTCTTGTCACCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFCCCC*FLSPFS
Trigger: AGAAAAAGGTGACAAGAATCAGCAACAGCAGCAGAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTTTCAGGCTTCTACTTaGGTAACCTTGATTATGCAA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLFQAST*VTLIMQ
Trigger: TTGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCCACAAGTCATGCTCTaGATAATCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYPQVML*IIKQQP
Trigger: TGGCTGCTGTTTGATTATGCAGAGCATGACTTGTGG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGATCCTGCAGAGCTTaGTCCGAGGTAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGSCRA*SEVILL
Trigger: CAAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAGGATCCCTGAACGCTaGTTTGGTAATTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSRIPER*FGNSGE
Trigger: CTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCAATGCAGACATATTaGTGGAGCCTGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSMQTY*WSLCSG
Trigger: CCCAGAGCACAGGCTCCAGCAATATGTCTGCATTGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGAACACAAATTTCTTaGCCCTTACATTACAATGGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRTQIS*PLHYNG
Trigger: CCCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAAGAGCCAGTACCAGTaGAGGGATAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSKSQYQ*RDRNSV
Trigger: GACTGAGTTCCTATCCCTGCACTGGTACTGGCTCTT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGTCTTTGTATGTCACTaGATGATCTACTTCATCACA +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLVFVCH*MIYFIT
Trigger: TGTGATGAAGTAGATCATGCAGTGACATACAAAGAC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGTCTTTGTATGTCACTaGATGATCTACTTCATCACA +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHVFVCH*MIYFIT
Trigger: TGTGATGAAGTAGATCATGCAGTGACATACAAAGAC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGGGGCATAGTATTTTaGTTTACATATCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHRGIVF*FTYLSG
Trigger: CCCAGATAGATATGTAAACCAAAATACTATGCCCCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAGGGGCATAGTATTTTaGTTTACATATCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLRGIVF*FTYLSG
Trigger: CCCAGATAGATATGTAAACCAAAATACTATGCCCCT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTTCTGGCTATGTCCTaGAGGATATTGTATACTGGG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAFLAMS*RILYTG
Trigger: CCCAGTATACAATATCCTCCAGGACATAGCCAGAAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTGGAATGGAGATTTCTaGCTATGTCCTGGAGGATAT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAWNGDF*LCPGGY
Trigger: ATATCCTCCAGGACATAGCCAGAAATCTCCATTCCA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTTCTGCTGCTGTTGCTaGTTCTTGTCACCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYFCCCC*FLSPFS
Trigger: AGAAAAAGGTGACAAGAATCAGCAACAGCAGCAGAA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTC +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKVKRLL*TFQRYV
Trigger: GACGTATCTTTGAAATGTTCACAGCAGCCTTTTAAC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAACAGGGTAGTTCTGTaGATGTATAAGCGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSANRVVL*MYKRKN
Trigger: GTTCTTACGCTTATACATTCACAGAACTACCCTGTT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAAAGCTACCTTACCTTaGGCTCATCTGTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSKATLP*AHLSCN
Trigger: GTTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCAATTCTCGCAAAAGTaGAATCTCTCTACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYQFSQK*NLSTSR
Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGCGAGAATTG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGCAATCACATTAGGGTaGTTCAATTCTCGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKAITLG*FNSRKS
Trigger: ACTTTTGCGAGAATTGAAGCACCCTAATGTGATTGC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGAAAGGAACACCTTCTaGAATGCAATCACATTAGGG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYERNTF*NAITLG
Trigger: CCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp CAGTTGATCATGATGAAAGGGATTGCTTGTTTTTATATCTTCCTGACGACAGTGGAAAGGAACACCTTCTaGAATGCAATCACATTAGGG +
Preference number: 4 (lower is better)
Translates to: QLIMMKGIACFYIFLTTVERNTF*NAITLG
Trigger: CCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTC...CACTGTCGTCAGGAAGATATAAAAACAAGCAATCCCTTTCATCATGATCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTCTTTGTATAATGCCTTaGACCAAGCAAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGILCIMP*TKQKFW
Trigger: CCAGAACTTTTGCTTGGTGCAAGGCATTATACAAAG...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGACCTTCTATTTTCCTTaGAATTTCCTACAACCACTT +
Preference number: 4 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLTFYFP*NFLQPL
Trigger: AAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATACCTTCTATTTTCCTTaGAATTTCCTACAACCACTT +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHTFYFP*NFLQPL
Trigger: AAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATACCAAGCAAAAGTTCTaGAGCCCGATACCAAAATGT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYTKQKF*SPIPKC
Trigger: ACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CCA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAAGTGTGGGATATTCTaGCATCTTTCTAATATCTTC +
Preference number: 4 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHKCGIF*HLSNIF
Trigger: GAAGATATTAGAAAGATGCCAGAATATCCCACACTT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTCAGCGTTTTGGTGTaGGCCATCGAGACTGTACAA +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSFSVLV*AIETVQ
Trigger: TTGTACAGTCTCGATGGCCCACACCAAAACGCTGAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGAGGATATTGTATACTaGGAGCAACTGACGAAATCC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYEDIVY*EQLTKS
Trigger: GGATTTCGTCAGTTGCTCCCAGTATACAATATCCTC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGAACTCAGTCATGTGTaGAATGGAGATTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYELSHV*NGDFWL
Trigger: TAGCCAGAAATCTCCATTCCACACATGACTGAGTTC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp CAGTTGATCATGATGAAAGGGATTGCTTGTTTTTATATCTTCCTGACGACAGTGGCTTTTGATGCACGGTaGAACTTAATAATATGCCAC +
Preference number: 4 (lower is better)
Translates to: QLIMMKGIACFYIFLTTVAFDAR*NLIICH
Trigger: GTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...CACTGTCGTCAGGAAGATATAAAAACAAGCAATCCCTTTCATCATGATCAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR TCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTTCAGGCTTCTACTTaGGTAACCTTGATTATGCAA +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFQAST*VTLIMQ
Trigger: TTGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYVKRLL*TFQRYV
Trigger: GACGTATCTTTGAAATGTTCACAGCAGCCTTTTAAC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTTGTATGTCACTGCATaGTCTACTTCATCACAAGGA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYLYVTA*STSSQG
Trigger: TCCTTGTGATGAAGTAGATCATGCAGTGACATACAA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGACATGGATATTCCTGTaGCTTCAATTTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKTWIFL*LQFASM
Trigger: CATTGAAGCAAATTGAAGGCACAGGAATATCCATGT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCATAGATCTTGGCAACTaGATGGGCTTTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAIDLGN*MGFLFA
Trigger: AGCAAATAAAAAGCCCATGCAGTTGCCAAGATCTAT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTATAGATCTTGGCAACTaGATGGGCTTTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGIIDLGN*MGFLFA
Trigger: AGCAAATAAAAAGCCCATGCAGTTGCCAAGATCTAT...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCATCAGTCCTGCACAATaGTCAGTATATAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAISPAQ*SVYKVF
Trigger: GAAAACCTTATATACTGAGCATTGTGCAGGACTGAT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCACAAAGGTAAAGTTTaGCCTCAAAAAGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAHKGKV*PQKASK
Trigger: CTTTGAAGCTTTTTGAGGGCAAACTTTACCTTTGTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAATTTCAAAGAGAAATaGCATCATTTGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSANFKEK*HHLGTT
Trigger: TGTGGTCCCCAAATGATGGCATTTCTCTTTGAAATT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTACATATCACCCCTTTaGAGTGATAGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYYISPL*SDSIEE
Trigger: CTCTTCTATGCTATCACTGCAAAGGGGTGATATGTA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGATCTTGGCAACTGCATaGGCTTTTTATTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKILATA*AFYLLL
Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTGCCAAGAT...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTACTTCAGTTCTTCGTaGCATAAAGCACATAACTGC +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYYFSSS*HKAHNC
Trigger: GCAGTTATGTGCTTTATGCCACGAAGAACTGAAGTA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAGATCAGTAAGGTCCTaGCTGGCTACAGTATCACAT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSRSVRS*LATVSH
Trigger: ATGTGATACTGTAGCCAGCCAGGACCTTACTGATCT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACCTTCAAGCCTCTGTTaGTCTAACTGCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSPSSLC*SNCHFT
Trigger: AGTGAAATGGCAGTTAGACCAACAGAGGCTTGAAGG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CAA 72 bp TGCAGGAAACCCCATGACACTAAATATCCGATCCAGTaGATCATGATGAAAGGGATTGCTTGTTTTTATATC +
Preference number: 4 (lower is better)
Translates to: CRKPHDTKYPIQ*IMMKGIACFYI
Trigger: GATATAAAAACAAGCAATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACTATTCAGAATAAGATaGTGCTGGGAACTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLFRIR*CWELSS
Trigger: GGAACTGAGTTCCCAGCATCATCTTATTCTGAATAG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATACATGGATATTCCTGTaGCTTCAATTTGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYTWIFL*LQFASM
Trigger: CATTGAAGCAAATTGAAGGCACAGGAATATCCATGT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGAAAGGAACACCTTCTaGAATGCAATCACATTAGGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSERNTF*NAITLG
Trigger: CCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCATAAAGCACATAACTaGAAAGATCTAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKHKAHN*KDLGSF
Trigger: AAAACTGCCTAGATCTTTGCAGTTATGTGCTTTATG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAATTTCAAAGAGAAATaGCATCATTTGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYNFKEK*HHLGTT
Trigger: TGTGGTCCCCAAATGATGGCATTTCTCTTTGAAATT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGTCTTTGTATGTCACTaGATGATCTACTTCATCACA +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYVFVCH*MIYFIT
Trigger: TGTGATGAAGTAGATCATGCAGTGACATACAAAGAC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGTAATTCTCTTGGTTaGATCCATGGTCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGNSLG*IHGQEF
Trigger: AAACTCCTGACCATGGATCCAACCAAGAGAATTACC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTATTTTACTTGTGTATaGACCCACAGTATCATAACC +
Preference number: 4 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAYFTCV*THSIIT
Trigger: GGTTATGATACTGTGGGTCCATACACAAGTAAAATA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACAGAAAGCCTTCACTTaGATTCATTCCTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSQKAFT*IHSFLS
Trigger: TGACAGGAAGGAATGAATCCAAGTGAAGGCTTTCTG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCTTTTGATGCACGGTaGAACTTAATAATATGCCAC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSAFDAR*NLIICH
Trigger: GTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACTTCTAAAGTCTTTTTaGAGTGTGGGATATTCTGGC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLLKSF*SVGYSG
Trigger: GCCAGAATATCCCACACTTCAAAAAGACTTTAGAAG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGTTAAAAGGCTGCTGTaGACATTTCAAAGATACGTC +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSVKRLL*TFQRYV
Trigger: GACGTATCTTTGAAATGTTCACAGCAGCCTTTTAAC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTGTATGTCACTGCATaGTCTACTTCATCACAAGGA +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLYVTA*STSSQG
Trigger: TCCTTGTGATGAAGTAGATCATGCAGTGACATACAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCAATCACATTAGGGTaGTTCAATTCTCGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSAITLG*FNSRKS
Trigger: ACTTTTGCGAGAATTGAAGCACCCTAATGTGATTGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACTTTGTATAATGCCTTaGACCAAGCAAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLCIMP*TKQKFW
Trigger: CCAGAACTTTTGCTTGGTGCAAGGCATTATACAAAG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR GCA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCATAAAGCACATAACTaGAAAGATCTAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYHKAHN*KDLGSF
Trigger: AAAACTGCCTAGATCTTTGCAGTTATGTGCTTTATG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR TCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTCCTCCCATGTGTATaGGTTTTAAATGGCATCATA +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSFLPCV*VLNGII
Trigger: TATGATGCCATTTAAAACTCATACACATGGGAGGAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAATAGATCTTGGCAACTaGATGGGCTTTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSIDLGN*MGFLFA
Trigger: AGCAAATAAAAAGCCCATGCAGTTGCCAAGATCTAT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAATAAACCATAGTGATTaGTACAGCATGAGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSINHSD*YSMRKV
Trigger: CACCTTTCTCATGCTGTAGCAATCACTATGGTTTAT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR GCA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACACAAAGGTAAAGTTTaGCCTCAAAAAGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSHKGKV*PQKASK
Trigger: CTTTGAAGCTTTTTGAGGGCAAACTTTACCTTTGTG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
3UTR CAA 72 bp AAAATGTATACTGGCTTCTGTCTAATCTTATTTTACTaGTGTATGGACCCACAGTATCATAACCAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: KMYTGFCLILFY*CMDPQYHNQVD
Trigger: ATCTACCTGGTTATGATACTGTGGGTCCATACACAAGTAAAATAAGATTAGACAGAAGCCAGTATACATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CCA 90 bp AAGGCCCTAGCCGTGGCTTCTTGTTTGGAGGCACCTGGTTCAGGCTaGAGTCCTGGCTGTGCTGCAACCCTGCTCCGGTGCCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: KALAVASCLEAPGSG*SPGCAATLLRCPRP
Trigger: GGGTCGGGGGCACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CCA 90 bp TTTGCGCCTGAAGGCCCTAGCCGTGGCTTCTTGTTTGGAGGCACCTaGTTCAGGCTGGAGTCCTGGCTGTGCTGCAACCCTGCTCCGGTG +
Preference number: 5 (lower is better)
Translates to: FAPEGPSRGFLFGGT*FRLESWLCCNPAPV
Trigger: CACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGCCTTCAGGCGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS TCA 90 bp GGGAGCTGGTCAGTACCGGTGGGCCTGGTGAGATGGGTGGTACTGTaGGCTCTGCTGAGACGAGGAAGAGTAGCCAAGTGTGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GSWSVPVGLVRWVVL*ALLRRGRVAKCALG
Trigger: TCCCAGAGCACACTTGGCTACTCTTCCTCGTCTCAGCAGAGCTCACAGTACCACCCATCTCACCAGGCCCACCGGTACTGACCAGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCCACCTGCGGTCCCGTaGGTCTGGGTGCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAPPAVP*VWVLFC
Trigger: GCAGAACAGCACCCAGACCAACGGGACCGCAGGTGG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCAGGTCCACCTGAGTTaGCGCCTGAAGGCCCTAGCC +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAQVHLS*RLKALA
Trigger: GGCTAGGGCCTTCAGGCGCAAACTCAGGTGGACCTG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS GCA 90 bp GGTGGTACTGTGAGCTCTGCTGAGACGAGGAAGAGTAGCCAAGTGTaGTCTGGGACTGAGAGGATCCCTGAACGCTGCTTTGGTAATTCA +
Preference number: 5 (lower is better)
Translates to: GGTVSSAETRKSSQV*SGTERIPERCFGNS
Trigger: TGAATTACCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACACTTGGCTACTCTTCCTCGTCTCAGCAGAGCTCACAGTACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCCTAGCCGTGGCTTCTaGTTTGGAGGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAPSRGF*FGGTWF
Trigger: GAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS GCA 90 bp AAGAGTAGCCAAGTGTGCTCTGGGACTGAGAGGATCCCTGAACGCTaGTTTGGTAATTCAGGCGAGAACTGGAGTGCTGATAATCCGAGG +
Preference number: 5 (lower is better)
Translates to: KSSQVCSGTERIPER*FGNSGENWSADNPR
Trigger: CCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACACTTGGCTACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAVPRPT*HPSYSN
Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCCACCTGCGGTCCCGTaGGTCTGGGTGCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAPPAVP*VWVLFC
Trigger: GCAGAACAGCACCCAGACCAACGGGACCGCAGGTGG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCCGTGGCTTCTTGTTaGGAGGCACCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAVASC*EAPGSG
Trigger: GCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCAGCAAGAGGAACACTTaGCTGTCAGGCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASKRNT*LSGLTL
Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCTTGCT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTCCGAGGTAATTCTCTaGGTTGGATCCATGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYASEVIL*VGSMVR
Trigger: CCTGACCATGGATCCAACCAAGAGAATTACCTCGGA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCCACCTGCGGTCCCGTaGGTCTGGGTGCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYPPAVP*VWVLFC
Trigger: GCAGAACAGCACCCAGACCAACGGGACCGCAGGTGG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCCTAGCCGTGGCTTCTaGTTTGGAGGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHPSRGF*FGGTWF
Trigger: GAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCCTAGCCGTGGCTTCTaGTTTGGAGGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLPSRGF*FGGTWF
Trigger: GAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCAGGTCCACCTGAGTTaGCGCCTGAAGGCCCTAGCC +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAQVHLS*RLKALA
Trigger: GGCTAGGGCCTTCAGGCGCAAACTCAGGTGGACCTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGCAAGAGGAACACTTaGCTGTCAGGCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKASKRNT*LSGLTL
Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCTTGCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTTCAATGCAGACATATaGCTGGAGCCTGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAFNADI*LEPVLW
Trigger: CCAGAGCACAGGCTCCAGCAATATGTCTGCATTGAA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCCCCTCCTGTACCCTaGGGGGACATAACAGTATCT +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAPPVP*GDITVS
Trigger: AGATACTGTTATGTCCCCCAAGGGTACAGGAGGGGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTGTGAAGCACCCAATTaGCATGGAGGTAATGGATAC +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYACEAPN*HGGNGY
Trigger: GTATCCATTACCTCCATGCAAATTGGGTGCTTCACA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCCCATGTCAGCTATTTaGACTCTCCCCCTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLPMSAI*TLPLSG
Trigger: TCCTGAGAGGGGGAGAGTCAAAATAGCTGACATGGG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCTGTCAGGCTTGACCTaGTGTTTCTCCATGTACTTT +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYALSGLT*CFSMYF
Trigger: AAAGTACATGGAGAAACACAAGGTCAAGCCTGACAG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGGGGATCCTGCAGAGCTaGCTCCGAGGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLGILQS*LRGNSL
Trigger: AAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCCC...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTTAAGGAATTCTCGTTaGGGGTATGGAATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYALRNSR*GYGIWQ
Trigger: CTGCCAGATTCCATACCCCAAACGAGAATTCCTTAA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCTGGTTCTGCTGCTGTaGCTGATTCTTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKALVLLL*LILVTF
Trigger: AAAGGTGACAAGAATCAGCAACAGCAGCAGAACCAG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGGACCACCCAGTTGTaGTTAAAAGGCTGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKARTTQL*LKGCCE
Trigger: TTCACAGCAGCCTTTTAACAACAACTGGGTGGTCCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTACAAGGACCACCCAGTaGTTGTTAAAAGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKATRTTQ*LLKGCC
Trigger: ACAGCAGCCTTTTAACAACAACTGGGTGGTCCTTGT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKVPRPT*HPSYSN
Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGCTACCTCCAACGCTaGAGGTCCATACACGAAGCC +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKCYLQR*RSIHEA
Trigger: GGCTTCGTGTATGGACCTCAAGCGTTGGAGGTAGCA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323817.7
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGCAAGAGGAACACTTaGCTGTCAGGCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSKRNT*LSGLTL
Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCTTGCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACAGGTCCACCTGAGTTaGCGCCTGAAGGCCCTAGCC +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSQVHLS*RLKALA
Trigger: GGCTAGGGCCTTCAGGCGCAAACTCAGGTGGACCTG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAGATCTAGGCAGTTTTaGGTTGTAGGTTCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKARSRQF*VVGSLC
Trigger: ACAGAGGGAACCTACAACCAAAAACTGCCTAGATCT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGAGAAATGCCATCATTaGGGGACCACAAAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAEKCHH*GTTKVK
Trigger: CTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCCATTACTAGGATATTaGCTGGTTTCAAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAPLLGY*LVSSLC
Trigger: ACAGAGACTTGAAACCAGCAAATATCCTAGTAATGG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCCTTTGTATAATGCCTaGCACCAAGCAAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAPLYNA*HQAKVL
Trigger: CAGAACTTTTGCTTGGTGCAAGGCATTATACAAAGG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGGGATCCTGCAGAGCTaGCTCCGAGGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKGILQS*LRGNSL
Trigger: AAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCCC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCCGTGGCTTCTTGTTaGGAGGCACCTGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSAVASC*EAPGSG
Trigger: GCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAGGACCACCCAGTTGTaGTTAAAAGGCTGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHRTTQL*LKGCCE
Trigger: TTCACAGCAGCCTTTTAACAACAACTGGGTGGTCCT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCCCCTCCTGTACCCTaGGGGGACATAACAGTATCT +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYAPPVP*GDITVS
Trigger: AGATACTGTTATGTCCCCCAAGGGTACAGGAGGGGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTTCTGTCCTGCAACACTaGAATTCCTTTCACAAACAC +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKASVLQH*NSFHKH
Trigger: GTGTTTGTGAAAGGAATTCAAGTGTTGCAGGACAGA...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCACTTCATCACAAGGATaGTTTCAGCCTCATAGTATC +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYATSSQG*FQPHSI
Trigger: GATACTATGAGGCTGAAACAATCCTTGTGATGAAGT...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCTTCATTTCCTTGTTTaGGAACCTGGTGGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYLHFLV*EPGGPR
Trigger: GCGCGGCCCACCAGGTTCCAAAACAAGGAAATGAAG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCCCTCCTTCATTTCCTaGTTTTGGAACCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKPSFIS*FWNLVG
Trigger: GCCCACCAGGTTCCAAAACAAGGAAATGAAGGAGGG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCCCATATATCTATTTaGACTCTCCCCCTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHAHISI*TLPLSG
Trigger: TCCTGAGAGGGGGAGAGTCAAAATAGATATATGGGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413605.6
CDS TCA 90 bp CACTTTATTCAGAAATGGTCCGTTACAATCCTCTTCCGTAGAGTTTaGCTCTCTTTAAAGTCTATGCTGGACAGGGCATCTTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HFIQKWSVTILFRRV*LSLKSMLDRASSWV
Trigger: GACCCAGGAAGATGCCCTGTCCAGCATAGACTTTAAAGAGAGTCAAACTCTACGGAAGAGGATTGTAACGGACCATTTCTGAATAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468997.5
ENST00000497709.1
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGTGTGAAGCACCCAATTaGCATGGAGGTAATGGATAC +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLCEAPN*HGGNGY
Trigger: GTATCCATTACCTCCATGCAAATTGGGTGCTTCACA...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCCCATGTCAGCTATTTaGACTCTCCCCCTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYPMSAI*TLPLSG
Trigger: TCCTGAGAGGGGGAGAGTCAAAATAGCTGACATGGG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCTGTCAGGCTTGACCTaGTGTTTCTCCATGTACTTT +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHLSGLT*CFSMYF
Trigger: AAAGTACATGGAGAAACACAAGGTCAAGCCTGACAG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCCGAGGTAATTCTCTaGGTTGGATCCATGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASEVIL*VGSMVR
Trigger: CCTGACCATGGATCCAACCAAGAGAATTACCTCGGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCCCTGAACGCTGCTTaGGTAATTCAGGCGAGAACT +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASLNAA*VIQART
Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCTTTTCAGGCTTCTACTaGAGTAACCTTGATTATGCA +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAFSGFY*SNLDYA
Trigger: TGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAAA...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGCTTCATCTTCAGTCTaGATGAGTGTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHASSSV*MSVTMQ
Trigger: CTGCATAGTGACACTCATCAAGACTGAAGATGAAGC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CCAGGAGGGCTTACTGTCACAGATCACAAGCTCCTTAAGGACAAGAAGTATGCCCAAAAGCACATCAAGTaGCATGTCTTATTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: PGGLTVTDHKLLKDKKYAQKHIK*HVLFSN
Trigger: GTTGGAAAATAAGACATGCAACTTGATGTGCTTTTG...GGCATACTTCTTGTCCTTAAGGAGCTTGTGATCTGTGACAGTAAGCCCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCCTTTGTATAATGCCTaGCACCAAGCAAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLPLYNA*HQAKVL
Trigger: CAGAACTTTTGCTTGGTGCAAGGCATTATACAAAGG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAAATATCCGATCCAGTaGATCATGATGAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAKYPIQ*IMMKGI
Trigger: AATCCCTTTCATCATGATCAACTGGATCGGATATTT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGCAAATACATCTAATGTaGGCAAAGGGTCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLQIHLM*AKGPPE
Trigger: TTCAGGAGGACCCTTTGCCAACATTAGATGTATTTG...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCTGGTTCTGCTGCTGTaGCTGATTCTTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLVLLL*LILVTF
Trigger: AAAGGTGACAAGAATCAGCAACAGCAGCAGAACCAG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTTCAATGCAGACATATaGCTGGAGCCTGTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYFNADI*LEPVLW
Trigger: CCAGAGCACAGGCTCCAGCAATATGTCTGCATTGAA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTGCATTTTTACCTGTGTaGCTAAATCAGTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAAFLPV*LNQFMK
Trigger: CTTCATGAACTGATTTAGCAACACAGGTAAAAATGC...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATGAAATCCTAGTGCAGTaGTTACTCTCTTCAGCGTTT +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHEILVQ*LLSSAF
Trigger: AAACGCTGAAGAGAGTAACAACTGCACTAGGATTTC...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTATGCCTTTTGTGATATaGAATCACTGGCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAMPFVI*NHWLSL
Trigger: TAGAGAAAGCCAGTGATTCAATATCACAAAAGGCAT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTAAGGGGCATAGTATTTaGGTTTACATATCTATCTGG +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAKGHSI*VYISIW
Trigger: CCAGATAGATATGTAAACCAAAATACTATGCCCCTT...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTGTGTTAAAAAGGCTTaGTTCCCAACTGGGTGCGGT +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKCVKKA*FPTGCG
Trigger: ACCGCACCCAGTTGGGAACAAAGCCTTTTTAACACA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTCTGTCCTGCAACACTaGAATTCCTTTCACAAACAC +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHSVLQH*NSFHKH
Trigger: GTGTTTGTGAAAGGAATTCAAGTGTTGCAGGACAGA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCAAAGCTACCTTACCTaGAGCTCATCTGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAQSYLT*SSSVLQ
Trigger: TTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGTTACTCTCTTCAGCGTTTTGGTGTGGGCCATCGAGACTGTACAAAGCTCCTTCAGTCCAGATTTaGTGTAATACTTTTAGTGTC +
Preference number: 5 (lower is better)
Translates to: QLLLSSAFWCGPSRLYKAPSVQI*CNTFSV
Trigger: GACACTAAAAGTATTACACAAAATCTGGACTGAAGG...AGCTTTGTACAGTCTCGATGGCCCACACCAAAACGCTGAAGAGAGTAACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCTGTCAGGCTTGACCTaGTGTTTCTCCATGTACTTT +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLSGLT*CFSMYF
Trigger: AAAGTACATGGAGAAACACAAGGTCAAGCCTGACAG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGGGATCCTGCAGAGCTaGCTCCGAGGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSGILQS*LRGNSL
Trigger: AAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCCC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTAAGGAATTCTCGTTaGGGGTATGGAATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKLRNSR*GYGIWQ
Trigger: CTGCCAGATTCCATACCCCAAACGAGAATTCCTTAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCAAAGCTACCTTACCTaGAGCTCATCTGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYQSYLT*SSSVLQ
Trigger: TTGCAGGACAGATGAGCTCAAGGTAAGGTAGCTTTG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGACTTCATCACAAGGATaGTTTCAGCCTCATAGTATC +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLTSSQG*FQPHSI
Trigger: GATACTATGAGGCTGAAACAATCCTTGTGATGAAGT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CAGTTGATCATGATGAAAGGGATTGCTTGTTTTTATATCTTCCTGACGACAGTGTGTGAAGCACCCAATTaGCATGGAGGTAATGGATAC +
Preference number: 5 (lower is better)
Translates to: QLIMMKGIACFYIFLTTVCEAPN*HGGNGY
Trigger: GTATCCATTACCTCCATGCAAATTGGGTGCTTCACA...CACTGTCGTCAGGAAGATATAAAAACAAGCAATCCCTTTCATCATGATCAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCGGCTTTAGAGGAGAATaGAATAATCTGGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAGFRGE*NNLAKP
Trigger: GGGTTTTGCCAGATTATTCAATTCTCCTCTAAAGCC...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGGGCTTTAGAGGAGAATaGAATAATCTGGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKGFRGE*NNLAKP
Trigger: GGGTTTTGCCAGATTATTCAATTCTCCTCTAAAGCC...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323817.7
ENST00000368911.8
CDS-3UTR CAA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTGGCTTTAGAGGAGAATaGAATAATCTGGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGIGFRGE*NNLAKP
Trigger: GGGTTTTGCCAGATTATTCAATTCTCCTCTAAAGCC...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR CAA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTCCTTTGTATAATGCCTaGCACCAAGCAAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGIPLYNA*HQAKVL
Trigger: CAGAACTTTTGCTTGGTGCAAGGCATTATACAAAGG...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCCGAGGTAATTCTCTaGGTTGGATCCATGGTCAGG +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSEVIL*VGSMVR
Trigger: CCTGACCATGGATCCAACCAAGAGAATTACCTCGGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCCAAATACATCTAATGTaGGCAAAGGGTCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAQIHLM*AKGPPE
Trigger: TTCAGGAGGACCCTTTGCCAACATTAGATGTATTTG...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATCCCTGAACGCTGCTTaGGTAATTCAGGCGAGAACT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSSLNAA*VIQART
Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATTTTTCAGGCTTCTACTaGAGTAACCTTGATTATGCA +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHFSGFY*SNLDYA
Trigger: TGCATAATCAAGGTTACTCAAGTAGAAGCCTGAAAA...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGAAGAACACAAATTTCTaGCCCCTTACATTACAATGG +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLKNTNF*PLTLQW
Trigger: CCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCTT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAAGAACACAAATTTCTaGCCCCTTACATTACAATGG +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHKNTNF*PLTLQW
Trigger: CCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCTT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATATTTACAGAACAGATTaGGGGATAGTAACTACCCAA +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHIYRTD*GIVTTQ
Trigger: TTGGGTAGTTACTATCCCCAAATCTGTTCTGTAAAT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp CATGATCTACTTCATCACAAGGATTGTTTCAGCCTCATAGTATCAGCCCTGCTGATGCCTTTTGTGATATaGAATCACTGGCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: HDLLHHKDCFSLIVSALLMPFVI*NHWLSL
Trigger: TAGAGAAAGCCAGTGATTCAATATCACAAAAGGCAT...CAGCAGGGCTGATACTATGAGGCTGAAACAATCCTTGTGATGAAGTAGATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTAAAGGTAACCTCCTaGAGAGCAAGAACAGACCTT +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSALKVTS*RARTDL
Trigger: AAGGTCTGTTCTTGCTCTCAAGGAGGTTACCTTTAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATAAGGGGCATAGTATTTaGGTTTACATATCTATCTGG +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHKGHSI*VYISIW
Trigger: CCAGATAGATATGTAAACCAAAATACTATGCCCCTT...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGAGAAATGCCATCATTaGGGGACCACAAAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYEKCHH*GTTKVK
Trigger: CTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TGTTGGTCTAACTGCCATTTCACTGCCTTTCTCTACTCCCTAGGAAGACATCATCCTTCAGTCCAGATTTaGTGTAATACTTTTAGTGTC +
Preference number: 5 (lower is better)
Translates to: CWSNCHFTAFLYSLGRHHPSVQI*CNTFSV
Trigger: GACACTAAAAGTATTACACAAAATCTGGACTGAAGG...ATGATGTCTTCCTAGGGAGTAGAGAAAGGCAGTGAAATGGCAGTTAGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTTTATGAGGCTACTGTaGGCATACGTTGTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKFMRLL*AYVVLL
Trigger: TAGAAGAACAACGTATGCCAACAGTAGCCTCATAAA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTTTATGAGGCTACTGTaGGCATACGTTGTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAFMRLL*AYVVLL
Trigger: TAGAAGAACAACGTATGCCAACAGTAGCCTCATAAA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACTGGTTCTGCTGCTGTaGCTGATTCTTGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLVLLL*LILVTF
Trigger: AAAGGTGACAAGAATCAGCAACAGCAGCAGAACCAG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTTAAAGGTAACCTCCTaGAGAGCAAGAACAGACCTT +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYLKVTS*RARTDL
Trigger: AAGGTCTGTTCTTGCTCTCAAGGAGGTTACCTTTAA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTCTGTCCTGCAACACTaGAATTCCTTTCACAAACAC +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYSVLQH*NSFHKH
Trigger: GTGTTTGTGAAAGGAATTCAAGTGTTGCAGGACAGA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATGTGAAGCACCCAATTaGCATGGAGGTAATGGATAC +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSCEAPN*HGGNGY
Trigger: GTATCCATTACCTCCATGCAAATTGGGTGCTTCACA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAAATATCCGATCCAGTaGATCATGATGAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAKYPIQ*IMMKGI
Trigger: AATCCCTTTCATCATGATCAACTGGATCGGATATTT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AGGAAACCCCATGACACTAAATATCCGATCCAGTTGATCATGATGAAAGGGATTAAATATCCGATCCAGTaGATCATGATGAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: RKPHDTKYPIQLIMMKGIKYPIQ*IMMKGI
Trigger: AATCCCTTTCATCATGATCAACTGGATCGGATATTT...AATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCTCTTCTAAAGTCTTTTaGAAGTGTGGGATATTCTGG +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSASSKVF*KCGIFW
Trigger: CCAGAATATCCCACACTTCAAAAAGACTTTAGAAGA...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGTCTTCTAAAGTCTTTTaGAAGTGTGGGATATTCTGG +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKSSKVF*KCGIFW
Trigger: CCAGAATATCCCACACTTCAAAAAGACTTTAGAAGA...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAAGATCTAGGCAGTTTTaGGTTGTAGGTTCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSRSRQF*VVGSLC
Trigger: ACAGAGGGAACCTACAACCAAAAACTGCCTAGATCT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGCTTCATCTTCAGTCTaGATGAGTGTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSASSSV*MSVTMQ
Trigger: CTGCATAGTGACACTCATCAAGACTGAAGATGAAGC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ACCTTCTATTTTCCTTGCAATTTCCTACAACCACTTAGGAGAGTATGTTCTGCCAAGGGGCATAGTATTTaGGTTTACATATCTATCTGG +
Preference number: 5 (lower is better)
Translates to: TFYFPCNFLQPLRRVCSAKGHSI*VYISIW
Trigger: CCAGATAGATATGTAAACCAAAATACTATGCCCCTT...GGCAGAACATACTCTCCTAAGTGGTTGTAGGAAATTGCAAGGAAAATAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp AAAGAGAAATGCCATCATTTGGGGACCACAAAGGTAAAGTTTGCCCTCAAAAAGCAAAAGCACATCAAGTaGCATGTCTTATTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: KEKCHHLGTTKVKFALKKQKHIK*HVLFSN
Trigger: GTTGGAAAATAAGACATGCAACTTGATGTGCTTTTG...CTTTTTGAGGGCAAACTTTACCTTTGTGGTCCCCAAATGATGGCATTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATTCTTCTAAAGTCTTTTaGAAGTGTGGGATATTCTGG +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYSSKVF*KCGIFW
Trigger: CCAGAATATCCCACACTTCAAAAAGACTTTAGAAGA...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATGCATTTTTACCTGTGTaGCTAAATCAGTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYAFLPV*LNQFMK
Trigger: CTTCATGAACTGATTTAGCAACACAGGTAAAAATGC...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAGAAATCCTAGTGCAGTaGTTACTCTCTTCAGCGTTT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSEILVQ*LLSSAF
Trigger: AAACGCTGAAGAGAGTAACAACTGCACTAGGATTTC...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATAAGAACACAAATTTCTaGCCCCTTACATTACAATGG +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYKNTNF*PLTLQW
Trigger: CCATTGTAATGTAAGGGGCAAGAAATTTGTGTTCTT...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTAAAGGTAACCTCCTaGAGAGCAAGAACAGACCTT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSLKVTS*RARTDL
Trigger: AAGGTCTGTTCTTGCTCTCAAGGAGGTTACCTTTAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp TTCAAAGAAATGCTGAAGGTTACAGAAGTGCTGGGATTAGATCAGACGCTTTATCCTTCAGTCCAGATTTaGTGTAATACTTTTAGTGTC +
Preference number: 5 (lower is better)
Translates to: FKEMLKVTEVLGLDQTLYPSVQI*CNTFSV
Trigger: GACACTAAAAGTATTACACAAAATCTGGACTGAAGG...ATAAAGCGTCTGATCTAATCCCAGCACTTCTGTAACCTTCAGCATTTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACCATTACTAGGATATTaGCTGGTTTCAAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSPLLGY*LVSSLC
Trigger: ACAGAGACTTGAAACCAGCAAATATCCTAGTAATGG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCATTTATGAGGCTACTGTaGGCATACGTTGTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSFMRLL*AYVVLL
Trigger: TAGAAGAACAACGTATGCCAACAGTAGCCTCATAAA...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCAACTTCATCACAAGGATaGTTTCAGCCTCATAGTATC +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSTSSQG*FQPHSI
Trigger: GATACTATGAGGCTGAAACAATCCTTGTGATGAAGT...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS-3UTR CAA 90 bp ATGAGTGTCACTATGCAGACTTCATTATTAGTGAGCATTATTATGCTGAGATCACAAAAGCACATCAAGTaGCATGTCTTATTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: MSVTMQTSLLVSIIMLRSQKHIK*HVLFSN
Trigger: GTTGGAAAATAAGACATGCAACTTGATGTGCTTTTG...TGATCTCAGCATAATAATGCTCACTAATAATGAAGTCTGCATAGTGACACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CCA 72 bp TGCGGTCCCGTTGGTCTGGGTGCTGTTCTGCTGTGGTaGGGGCGCCTGTGGAGGGGCTGCTGCCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: CGPVGLGAVLLW*GRLWRGCCLLW
Trigger: CCACAGCAGGCAGCAGCCCCTCCACAGGCGCCCCCACCACAGCAGAACAGCACCCAGACCAACGGGACCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CCA 72 bp GTGCTCTGGGCTGGGCTGGCCTGGCCCAACGGGAGCTaGTCAGTACCGGTGGGCCTGGTGAGATGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: VLWAGLAWPNGS*SVPVGLVRWVV
Trigger: TACCACCCATCTCACCAGGCCCACCGGTACTGACCAGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CCA 72 bp GCCGTGGCTTCTTGTTTGGAGGCACCTGGTTCAGGCTaGAGTCCTGGCTGTGCTGCAACCCTGCTCCGGTGC +
Preference number: 6 (lower is better)
Translates to: AVASCLEAPGSG*SPGCAATLLRC
Trigger: GCACCGGAGCAGGGTTGCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 72 bp ACCCCCAGTCCCGCCTCCCTCCTTCATTTCCTTGTTTaGGAACCTGGTGGGCCGCGCCGTGGCTTCCTCGAG +
Preference number: 6 (lower is better)
Translates to: TPSPASLLHFLV*EPGGPRRGFLE
Trigger: CTCGAGGAAGCCACGGCGCGGCCCACCAGGTTCCAAAACAAGGAAATGAAGGAGGGAGGCGGGACTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368911.8
CDS CCA 72 bp CAATGCAGACATATTGCTGGAGCCTGTGCTCTGGGCTaGGCTGGCCTGGCCCAACGGGAGCTGGTCAGTACC +
Preference number: 6 (lower is better)
Translates to: QCRHIAGACALG*AGLAQRELVST
Trigger: GGTACTGACCAGCTCCCGTTGGGCCAGGCCAGCCCAGCCCAGAGCACAGGCTCCAGCAATATGTCTGCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 90 bp GTCCACCTGAGTTTGCGCCTGAAGGCCCTAGCCGTGGCTTCTTGTTaGGAGGCACCTGGTTCAGGCTGGAGTCCTGGCTGTGCTGCAACC +
Preference number: 6 (lower is better)
Translates to: VHLSLRLKALAVASC*EAPGSGWSPGCAAT
Trigger: GGTTGCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGCCTTCAGGCGCAAACTCAGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 90 bp ACAGGTCCACCTGAGTTTGCGCCTGAAGGCCCTAGCCGTGGCTTCTaGTTTGGAGGCACCTGGTTCAGGCTGGAGTCCTGGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TGPPEFAPEGPSRGF*FGGTWFRLESWLCC
Trigger: GCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGCCTTCAGGCGCAAACTCAGGTGGACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 72 bp CCTGAGTTTGCGCCTGAAGGCCCTAGCCGTGGCTTCTaGTTTGGAGGCACCTGGTTCAGGCTGGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: PEFAPEGPSRGF*FGGTWFRLESW
Trigger: CCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGCCTTCAGGCGCAAACTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 90 bp GTAGCCAAGTGTGCTCTGGGACTGAGAGGATCCCTGAACGCTGCTTaGGTAATTCAGGCGAGAACTGGAGTGCTGATAATCCGAGGGCAT +
Preference number: 6 (lower is better)
Translates to: VAKCALGLRGSLNAA*VIQARTGVLIIRGH
Trigger: ATGCCCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACACTTGGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS GCA 72 bp CAAGTGTGCTCTGGGACTGAGAGGATCCCTGAACGCTaGTTTGGTAATTCAGGCGAGAACTGGAGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: QVCSGTERIPER*FGNSGENWSAD
Trigger: ATCAGCACTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 72 bp TGTGCTCTGGGACTGAGAGGATCCCTGAACGCTGCTTaGGTAATTCAGGCGAGAACTGGAGTGCTGATAATC +
Preference number: 6 (lower is better)
Translates to: CALGLRGSLNAA*VIQARTGVLII
Trigger: GATTATCAGCACTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 72 bp CAAAGGGTCCTCCTGAAAATAGGGATCCTGCAGAGCTaGCTCCGAGGTAATTCTCTTGGTTGGATCCATGGT +
Preference number: 6 (lower is better)
Translates to: QRVLLKIGILQS*LRGNSLGWIHG
Trigger: ACCATGGATCCAACCAAGAGAATTACCTCGGAGCAAGCTCTGCAGGATCCCTATTTTCAGGAGGACCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS TCA 72 bp CAGAAATGGTCCGTTACAATCCTCTTCCGTAGAGTTTaGCTCTCTTTAAAGTCTATGCTGGACAGGGCATCT +
Preference number: 6 (lower is better)
Translates to: QKWSVTILFRRV*LSLKSMLDRAS
Trigger: AGATGCCCTGTCCAGCATAGACTTTAAAGAGAGTCAAACTCTACGGAAGAGGATTGTAACGGACCATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468997.5
ENST00000497709.1
CDS GCA 72 bp AACCCATGTCAGCAAGTCTCTGTGAAGCACCCAATTTaGATGGAGGTAATGGATACCATCAAGAATCTGGTA +
Preference number: 6 (lower is better)
Translates to: NPCQQVSVKHPI*MEVMDTIKNLV
Trigger: TACCAGATTCTTGATGGTATCCATTACCTCCATGCAAATTGGGTGCTTCACAGAGACTTGCTGACATGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS CAA 72 bp AAACCCATGTCAGCAAGTCTCTGTGAAGCACCCAATTaGCATGGAGGTAATGGATACCATCAAGAATCTGGT +
Preference number: 6 (lower is better)
Translates to: KPMSASLCEAPN*HGGNGYHQESG
Trigger: ACCAGATTCTTGATGGTATCCATTACCTCCATGCAAATTGGGTGCTTCACAGAGACTTGCTGACATGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS CAA 90 bp AATCTGGCAAAACCCATGTCAGCAAGTCTCTGTGAAGCACCCAATTaGCATGGAGGTAATGGATACCATCAAGAATCTGGTAAAGTAAGG +
Preference number: 6 (lower is better)
Translates to: NLAKPMSASLCEAPN*HGGNGYHQESGKVR
Trigger: CCTTACTTTACCAGATTCTTGATGGTATCCATTACCTCCATGCAAATTGGGTGCTTCACAGAGACTTGCTGACATGGGTTTTGCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463016.1
CDS CAA 90 bp TTGTCACCTTTTTCTTCAGGATCATCTTCATTAAGGAATTCTCGTTaGGGGTATGGAATCTGGCAGCCGGCAAATACATCTAATGTTGGC +
Preference number: 6 (lower is better)
Translates to: LSPFSSGSSSLRNSR*GYGIWQPANTSNVG
Trigger: GCCAACATTAGATGTATTTGCCGGCTGCCAGATTCCATACCCCAAACGAGAATTCCTTAATGAAGATGATCCTGAAGAAAAAGGTGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS GCA 72 bp GAAAGGAACACCTTCTGCAATGCAATCACATTAGGGTaGTTCAATTCTCGCAAAAGTGCAATCTCTCTACAA +
Preference number: 6 (lower is better)
Translates to: ERNTFCNAITLG*FNSRKSAISLQ
Trigger: TTGTAGAGAGATTGCACTTTTGCGAGAATTGAAGCACCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
ENST00000457688.5
ENST00000463016.1
CDS GCA 72 bp ACGGTGAAACTTAATAATATGCCACAAGTCATGCTCTaGATAATCAAACAGCAGCCATACCTTCCTGTCACT +
Preference number: 6 (lower is better)
Translates to: TVKLNNMPQVML*IIKQQPYLPVT
Trigger: AGTGACAGGAAGGTATGGCTGCTGTTTGATTATGCAGAGCATGACTTGTGGCATATTATTAAGTTTCACCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
ENST00000457688.5
ENST00000460913.1
ENST00000463016.1
CDS CAA 72 bp TTTTCTTCAGGATCATCTTCATTAAGGAATTCTCGTTaGGGGTATGGAATCTGGCAGCCGGCAAATACATCT +
Preference number: 6 (lower is better)
Translates to: FSSGSSSLRNSR*GYGIWQPANTS
Trigger: AGATGTATTTGCCGGCTGCCAGATTCCATACCCCAAACGAGAATTCCTTAATGAAGATGATCCTGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
CDS CAA 90 bp GTCTTTATCTGCAGGAAACCCCATGACACTAAATATCCGATCCAGTaGATCATGATGAAAGGGATTGCTTGTTTTTATATCTTCCTGACG +
Preference number: 6 (lower is better)
Translates to: VFICRKPHDTKYPIQ*IMMKGIACFYIFLT
Trigger: CGTCAGGAAGATATAAAAACAAGCAATCCCTTTCATCATGATCAACTGGATCGGATATTTAGTGTCATGGGGTTTCCTGCAGATAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
ENST00000457688.5
CDS GCA 72 bp GTGCAATCTCTCTACAAGCCGACATGGATATTCCTGTaGCTTCAATTTGCTTCAATGCATATTCCTTTTCAT +
Preference number: 6 (lower is better)
Translates to: VQSLYKPTWIFL*LQFASMHIPFH
Trigger: ATGAAAAGGAATATGCATTGAAGCAAATTGAAGGCACAGGAATATCCATGTCGGCTTGTAGAGAGATTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
ENST00000457688.5
ENST00000463016.1
CDS CAA 72 bp GCTACTGTTGGCATACGTTGTTCTTCTAAAGTCTTTTaGAAGTGTGGGATATTCTGGCATCTTTCTAATATC +
Preference number: 6 (lower is better)
Translates to: ATVGIRCSSKVF*KCGIFWHLSNI
Trigger: GATATTAGAAAGATGCCAGAATATCCCACACTTCAAAAAGACTTTAGAAGAACAACGTATGCCAACAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323817.7
ENST00000368911.8
ENST00000413605.6
ENST00000457688.5