RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK17 (Homo sapiens)

Ensembl gene IDs: ENSG00000059758

Ensembl transcript IDs: ENST00000261211.8, ENST00000542666.5, ENST00000543119.6, ENST00000548422.1, ENST00000548734.1, ENST00000549899.1, ENST00000550971.5, ENST00000551484.1, ENST00000551816.5, ENST00000552262.1, ENST00000552496.5, ENST00000553042.1

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTTCAGGATCCCTGACTTaGCTGAGTCAGATTTTTCTC +
Preference number: 2 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCSGSLT*LSQIFL
Trigger: GAGAAAAATCTGACTCAGTCAAGTCAGGGATCCTGA...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543119.6
3UTR-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATCAGTTCTGAGTCCTTaGTTGGTAAGAAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQSVLSP*LVRKAG
Trigger: CCCAGCCTTTCTTACCAATCAAGGACTCAGAACTGA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
3UTR-3UTR GCA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCGAAGATTTACTGAGCTaGCCACATCATACAGAAAAG +
Preference number: 2 (lower is better)
Translates to: VMNLMTREAQDVSSASGTEDLLS*PHHTEK
Trigger: CTTTTCTGTATGATGTGGGCAGCTCAGTAAATCTTC...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
3UTR-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAAAAAAGACTCCACTGTaGAGAGGACAGTGTAGACAA +
Preference number: 2 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQKKTPL*RGQCRQ
Trigger: TTGTCTACACTGTCCTCTTCACAGTGGAGTCTTTTT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000261211.8
3UTR-3UTR TCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATCATCATACAGAAAAGTaGGTACGTGCAATGCTAAAC +
Preference number: 2 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDHHTEK*VRAMLN
Trigger: GTTTAGCATTGCACGTACTCACTTTTCTGTATGATG...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
3UTR-3UTR GCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGAGAAAAGTGAGTACGTaGAATGCTAAACATAAACAG +
Preference number: 2 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVRKVST*NAKHKQ
Trigger: CTGTTTATGTTTAGCATTGCACGTACTCACTTTTCT...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
3UTR-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATGTGTTTCTCAGTCCTaGACAAAAATTGCAGCTATA +
Preference number: 2 (lower is better)
Translates to: CITCLSKRNVLVNLLATLCVSQS*TKIAAI
Trigger: TATAGCTGCAATTTTTGTGCAGGACTGAGAAACACA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261211.8
3UTR GCA 72 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTaGAATGCTAAACATAAACAGTTGTGGAATGCACTG +
Preference number: 3 (lower is better)
Translates to: TELPTSYRKVST*NAKHKQLWNAL
Trigger: CAGTGCATTCCACAACTGTTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
3UTR TCA 72 bp GAAGATTTACTGAGCTGCCCACATCATACAGAAAAGTaGGTACGTGCAATGCTAAACATAAACAGTTGTGGA +
Preference number: 3 (lower is better)
Translates to: EDLLSCPHHTEK*VRAMLNINSCG
Trigger: TCCACAACTGTTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
3UTR TCA 72 bp TGGCACAAACAGAAAACAATAACACCTCTAGCACAGTaGGACTTCATTATCTTAAGAACGACCCATAAAAGA +
Preference number: 3 (lower is better)
Translates to: WHKQKTITPLAQ*DFIILRTTHKR
Trigger: TCTTTTATGGGTCGTTCTTAAGATAATGAAGTCTCACTGTGCTAGAGGTGTTATTGTTTTCTGTTTGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCTCGGCGGCTGCGGATTaGCGCCTCCGCCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGSAAAD*RLRLFP
Trigger: GGGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGA...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTAGCGGCCGGCAGACGTaGGGCGCTTCCGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCSGRQT*GASERR
Trigger: CCTGCGCTCGGAAGCGCCTCACGTCTGCCGGCCGCT...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCCGGGCTGAGACTGTCTaGCCGGGCGCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGRAETV*PGAGSF
Trigger: GAAGGAGCCAGCGCCCGGCCAGACAGTCTCAGCCCG...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCCCCGCGGCGACCGGATaGAAGTCCGGGTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: VMNLMTREAQDVSSASGTPAATG*KSGSQR
Trigger: CCGCTGAGACCCGGACTTGCATCCGGTCGCCGCGGG...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACCCGCGGCGACCGGATaGAAGTCCGGGTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQPAATG*KSGSQR
Trigger: CCGCTGAGACCCGGACTTGCATCCGGTCGCCGCGGG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTTGTCTGGCCGGGCGCTaGCTCCTTCTCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSCLAGR*LLLRGS
Trigger: AGAGCCGCGGAGAAGGAGCCAGCGCCCGGCCAGACA...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCATTCACACTCGGCGGCTaGGGATTGACGCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREAFTLGG*GLTPPP
Trigger: AGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAA...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGCGGCCGGCAGACGTaGGGCGCTTCCGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSGRQT*GASERR
Trigger: CCTGCGCTCGGAAGCGCCTCACGTCTGCCGGCCGCT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCAGCCGCGTTCGCTCCTTaGGTGTGCGTCGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREAAAFAP*VCVAFT
Trigger: TGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGC...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAAGGAATGCATACTGTaGGACGTTGGAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VMNLMTREAQDVSSASGTKECIL*DVGGLP
Trigger: TGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTT...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGGGAGCTCAGGAGACTaGGGGCGGCCGCGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLGSSGD*GRPRSL
Trigger: GAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCCC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCAGGGTGTCTCACGCGTTaGCAAGTCCCTCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREAGCLTR*QVPRST
Trigger: TGTTGACCGAGGGACTTGGCAACGCGTGAGACACCC...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCCAATTGAATGTGGCTTaGAAAATCCAGCAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGQLNVA*KIQQER
Trigger: CCGCTCTTGCTGGATTTTTCAAGCCACATTCAATTG...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCATCCATCAGGTATTCTaGTGTCTGCAGGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGIHQVF*CLQAVI
Trigger: TATCACTGCCTGCAGACATCAGAATACCTGATGGAT...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCCATGGCCTCTTCAGCTaGAACCCTTTTCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGHGLFS*NPFLRF
Trigger: GAATCTAAGAAAAGGGTTTCAGCTGAAGAGGCCATG...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATTTCGCTCCTTGCGTGTaGGTCGCTTTCACACTCGGC +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDFAPCV*VAFTLG
Trigger: GCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAA...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGGGTGTCTCACGCGTTaGCAAGTCCCTCGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQGCLTR*QVPRST
Trigger: TGTTGACCGAGGGACTTGGCAACGCGTGAGACACCC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATGTCTGGCCGGGCGCTaGCTCCTTCTCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLCLAGR*LLLRGS
Trigger: AGAGCCGCGGAGAAGGAGCCAGCGCCCGGCCAGACA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACGGGCTGAGACTGTCTaGCCGGGCGCTGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLRAETV*PGAGSF
Trigger: GAAGGAGCCAGCGCCCGGCCAGACAGTCTCAGCCCG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGTCCCTCGGTCAACATaGCTCCCGCGCCGACGAGCC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLVPRST*LPRRRA
Trigger: GGCTCGTCGGCGCGGGAGCCATGTTGACCGAGGGAC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGCCTGGCCAAGTTTCCTaGGATGGAGTTCCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVPGQVS*DGVPSS
Trigger: ACTGCTAGGAACTCCATCTCAGGAAACTTGGCCAGG...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGGATGGCGTGTGCAGTaGTCAAGCCAGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDGWRVQ*SSQVTC
Trigger: ACAAGTGACCTGGCTTGATCACTGCACACGCCATCC...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCAGTGTGGTCTCCGCAATaGGGGCTTCTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREAVWSPQ*GLLERS
Trigger: GGATCTTTCAAGAAGCCCCCATTGCGGAGACCACAC...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGCTGGGGGCTGGGCTTaGAACCATGTTATCAGACTT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQAGGWA*NHVIRL
Trigger: AAGTCTGATAACATGGTTTCAAGCCCAGCCCCCAGC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCGGTTTCAAGTCTCGATaGAATACCTTTCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: LMTREAQDVSSASGTRDGGFKSR*NTFLLW
Trigger: CCATAGAAGAAAGGTATTGCATCGAGACTTGAAACC...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGTGTGGTCTCCGCAATaGGGGCTTCTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQVWSPQ*GLLERS
Trigger: GGATCTTTCAAGAAGCCCCCATTGCGGAGACCACAC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGCAATGGGGGCTTCTTaGAAGATCCTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQAMGAS*KILCTG
Trigger: ACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACTGGACTTCATCAGATaGTGTCCCAGAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQLDFIR*CPRSLV
Trigger: GACCAAGCTTCTGGGACATCATCTGATGAAGTCCAG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTTGTGACAACTTCATTTaGGTAGGTCTTTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCCDNFI*VGLCGN
Trigger: GTTCCCACAAAGACCTACTCAAATGAAGTTGTCACA...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGCCGCGTTCGCTCCTTaGGTGTGCGTCGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLAAFAP*VCVAFT
Trigger: TGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTTCCATTTCTGGGCATTaGCATGAAGGAGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSSISGH*HEGAKA
Trigger: AGCCTTGGCTCCTTCATGGCAATGCCCAGAAATGGA...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAACCAGGGATGGCGTGTaGAGTGATCAAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKTRDGV*SDQARS
Trigger: TGACCTGGCTTGATCACTGCACACGCCATCCCTGGT...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATCATACTGTGAGACGTTaGAGGCCTGCCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDHTVRR*RPAILH
Trigger: GTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATG...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATTCCAATAACACTGTGTaGTCTCCGCAATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDSNNTV*SPQWGL
Trigger: AAGCCCCCATTGCGGAGACCACACAGTGTTATTGGA...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTCTTCGACTCATTGGTTaGTCAAATGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCLRLIG*SNGGLF
Trigger: AAACAGTCCACCATTTGACCAACCAATGAGTCGAAG...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCATTGTGGGAACTGACTTaGCTCGGGCTAGTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREALWELT*LGLVQN
Trigger: ATTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAA...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAGGAATGCATACTGTaGGACGTTGGAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHKECIL*DVGGLP
Trigger: TGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCGGTACCATAGTGTaGCAACTTCATTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSAGTIV*QLHLSR
Trigger: CCTACTCAAATGAAGTTGTCACACTATGGTACCGGC...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACATGTCAATCTGTGTTaGGTACTCCGAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQHVNLC*VLRGTK
Trigger: CTTGGTTCCTCGGAGTACTCAACACAGATTGACATG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACCTGGCCAAGTTTCCTaGGATGGAGTTCCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKPGQVS*DGVPSS
Trigger: ACTGCTAGGAACTCCATCTCAGGAAACTTGGCCAGG...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCCATCATACAGAAAAGTaGGTACGTGCAATGCTAAAC +
Preference number: 4 (lower is better)
Translates to: VMNLMTREAQDVSSASGTHHTEK*VRAMLN
Trigger: GTTTAGCATTGCACGTACTCACTTTTCTGTATGATG...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATTCGCTCCTTGCGTGTaGGTCGCTTTCACACTCGGC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLFAPCV*VAFTLG
Trigger: GCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp AGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATCCTGTGTACTGGTaGAGGAAGGAATGCATACTG +
Preference number: 4 (lower is better)
Translates to: SLQLLCFEVMNLMTREAQDPVYW*RKECIL
Trigger: CAGTATGCATTCCTTCCTCCACCAGTACACAGGATC...TTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAGTGTGGTCTCCGCAATaGGGGCTTCTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKVWSPQ*GLLERS
Trigger: GGATCTTTCAAGAAGCCCCCATTGCGGAGACCACAC...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATCTAACCTGGGTGCGTaGTTAATTAGAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQSNLGA*LIRGCG
Trigger: ACCACAGCCTCTAATTAACCACGCACCCAGGTTAGA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTTCTAACCTGGGTGCGTaGTTAATTAGAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSSNLGA*LIRGCG
Trigger: ACCACAGCCTCTAATTAACCACGCACCCAGGTTAGA...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAGCAATGGGGGCTTCTTaGAAGATCCTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKAMGAS*KILCTG
Trigger: ACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGC...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGCAATGGGGGCTTCTTaGAAGATCCTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHAMGAS*KILCTG
Trigger: ACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATCTGGACTTCATCAGATaGTGTCCCAGAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHLDFIR*CPRSLV
Trigger: GACCAAGCTTCTGGGACATCATCTGATGAAGTCCAG...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACTGGACTTCATCAGATaGTGTCCCAGAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKLDFIR*CPRSLV
Trigger: GACCAAGCTTCTGGGACATCATCTGATGAAGTCCAG...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAATCCATCAGGTATTCTaGTGTCTGCAGGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQIHQVF*CLQAVI
Trigger: TATCACTGCCTGCAGACATCAGAATACCTGATGGAT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACATGGCCTCTTCAGCTaGAACCCTTTTCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQHGLFS*NPFLRF
Trigger: GAATCTAAGAAAAGGGTTTCAGCTGAAGAGGCCATG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAATCAGGATCCCTGACTTaGCTGAGTCAGATTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLQLLCFEVMNLMTREAQSGSLT*LSQIFL
Trigger: GAGAAAAATCTGACTCAGTCAAGTCAGGGATCCTGA...TTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATTCCATTTCTGGGCATTaGCATGAAGGAGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHSISGH*HEGAKA
Trigger: AGCCTTGGCTCCTTCATGGCAATGCCCAGAAATGGA...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTTCCTTTATATACTGTTaGATATGTACCCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCSFIYC*ICTLSK
Trigger: CTTGGAGAGGGTACATATGCAACAGTATATAAAGGA...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTGTAAAAGGTCTTTGTaGCATCTGCAGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVCKRSL*HLQLSG
Trigger: TCCTGAAAGCTGCAGATGGCACAAAGACCTTTTACA...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAACAAGATGTGTCTTCTaGCTCAGGTACCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKTRCVF*LRYQGW
Trigger: CCATCCCTGGTACCTGAGGCAGAAGACACATCTTGT...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATACTGTGAGACGTTaGAGGCCTGCCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKHTVRR*RPAILH
Trigger: GTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATG...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGAAAGATCCTGTGTACTaGTGGAGGAAGGAATGCATA +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVKDPVY*WRKECI
Trigger: TATGCATTCCTTCCTCCACCAGTACACAGGATCTTT...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATCCAATAACACTGTGTaGTCTCCGCAATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKSNNTV*SPQWGL
Trigger: AAGCCCCCATTGCGGAGACCACACAGTGTTATTGGA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTACACCTGTAGGTGACTaGACTTCATCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSTPVGD*TSSDDV
Trigger: GACATCATCTGATGAAGTCCAGTCACCTACAGGTGT...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTAGACCTTCGACTCATTaGTTGGTCAAATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSRPSTH*LVKWWT
Trigger: AGTCCACCATTTGACCAACCAATGAGTCGAAGGTCT...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCAAATGAGGAGGTTCTGTaGTTTCAAGTCTCGATGCAA +
Preference number: 4 (lower is better)
Translates to: VSLQLLCFEVMNLMTREANEEVL*FQVSMQ
Trigger: TTGCATCGAGACTTGAAACCACAGAACCTCCTCATT...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATAGTACACATGTTTCATaGCCTCTTCAGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDSTHVS*PLQLKP
Trigger: GGGTTTCAGCTGAAGAGGCCATGAAACATGTGTACT...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAAGGAATGCATACTGTaGGACGTTGGAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLKECIL*DVGGLP
Trigger: TGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATGTGACAACTTCATTTaGGTAGGTCTTTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQCDNFI*VGLCGN
Trigger: GTTCCCACAAAGACCTACTCAAATGAAGTTGTCACA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGCCGGTACCATAGTGTaGCAACTTCATTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHAGTIV*QLHLSR
Trigger: CCTACTCAAATGAAGTTGTCACACTATGGTACCGGC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATCATGTCAATCTGTGTTaGGTACTCCGAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHHVNLC*VLRGTK
Trigger: CTTGGTTCCTCGGAGTACTCAACACAGATTGACATG...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACCTGGCCAAGTTTCCTaGGATGGAGTTCCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLPGQVS*DGVPSS
Trigger: ACTGCTAGGAACTCCATCTCAGGAAACTTGGCCAGG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACACATAGCCCCCAAATaGAAGAAACTATTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQHIAPK*KKLFPN
Trigger: ATTGGGGAATAGTTTCTTTCATTTGGGGGCTATGTG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATCCACGCAAAAATTCATaGTCGACACGTGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDPRKNS*STREMV
Trigger: AACCATTTCACGTGTCGATCATGAATTTTTGCGTGG...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAAGTCTACAGCTTCTATaGTTCGAAGTGATGAACCTG +
Preference number: 4 (lower is better)
Translates to: SLQLLCFEVMNLMTREAQSLQLL*FEVMNL
Trigger: CAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT...TTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGATCCTGTGTACTGGTaGAGGAAGGAATGCATACTG +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHDPVYW*RKECIL
Trigger: CAGTATGCATTCCTTCCTCCACCAGTACACAGGATC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTGGTTGGTCAAATGGTaGACTGTTTATCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVWLVKW*TVYLQL
Trigger: AAGTTGCAGATAAACAGTCCACCATTTGACCAACCA...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGCATTGGTTGGTCAAATaGTGGACTGTTTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVHWLVK*WTVYLQ
Trigger: TTGCAGATAAACAGTCCACCATTTGACCAACCAATG...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACTTCGACTCATTGGTTaGTCAAATGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQLRLIG*SNGGLF
Trigger: AAACAGTCCACCATTTGACCAACCAATGAGTCGAAG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATTGTGGGAACTGACTTaGCTCGGGCTAGTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKLWELT*LGLVQN
Trigger: ATTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATCTAACCTGGGTGCGTaGTTAATTAGAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKSNLGA*LIRGCG
Trigger: ACCACAGCCTCTAATTAACCACGCACCCAGGTTAGA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAATCCATCAGGTATTCTaGTGTCTGCAGGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKIHQVF*CLQAVI
Trigger: TATCACTGCCTGCAGACATCAGAATACCTGATGGAT...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATCATGGCCTCTTCAGCTaGAACCCTTTTCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHHGLFS*NPFLRF
Trigger: GAATCTAAGAAAAGGGTTTCAGCTGAAGAGGCCATG...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAACACCTCTAGCACAGTaGGACTTCATTATCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQTPLAQ*DFIILR
Trigger: TCTTAAGATAATGAAGTCTCACTGTGCTAGAGGTGT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATCAGGATCCCTGACTTaGCTGAGTCAGATTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKSGSLT*LSQIFL
Trigger: GAGAAAAATCTGACTCAGTCAAGTCAGGGATCCTGA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATCCATTTCTGGGCATTaGCATGAAGGAGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSISGH*HEGAKA
Trigger: AGCCTTGGCTCCTTCATGGCAATGCCCAGAAATGGA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGGTTTCAAGTCTCGATaGAATACCTTTCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQGFKSR*NTFLLW
Trigger: CCATAGAAGAAAGGTATTGCATCGAGACTTGAAACC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTAGTCGGAAAATTAAGTaGAGTTCATCTTCCACGGTT +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSSRKIK*SSSSTV
Trigger: AACCGTGGAAGATGAACTGCACTTAATTTTCCGACT...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATGTCAGGGATTCACTTaGTTGAATCAACTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQCQGFT*LNQLLH
Trigger: ATGCAGAAGTTGATTCAAGCAAGTGAATCCCTGACA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACATACTGTGAGACGTTaGAGGCCTGCCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLHTVRR*RPAILH
Trigger: GTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATCCAATAACACTGTGTaGTCTCCGCAATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSNNTV*SPQWGL
Trigger: AAGCCCCCATTGCGGAGACCACACAGTGTTATTGGA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATACACCTGTAGGTGACTaGACTTCATCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHTPVGD*TSSDDV
Trigger: GACATCATCTGATGAAGTCCAGTCACCTACAGGTGT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACATTGGTTGGTCAAATaGTGGACTGTTTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQHWLVK*WTVYLQ
Trigger: TTGCAGATAAACAGTCCACCATTTGACCAACCAATG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAGACCTTCGACTCATTaGTTGGTCAAATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHRPSTH*LVKWWT
Trigger: AGTCCACCATTTGACCAACCAATGAGTCGAAGGTCT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAAGTACACATGTTTCATaGCCTCTTCAGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKSTHVS*PLQLKP
Trigger: GGGTTTCAGCTGAAGAGGCCATGAAACATGTGTACT...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGATCGACACGTGAAATaGTTTATGACAAACACACCT +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDDRHVK*FMTNTP
Trigger: AGGTGTGTTTGTCATAAACCATTTCACGTGTCGATC...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATGTGACAACTTCATTTaGGTAGGTCTTTGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKCDNFI*VGLCGN
Trigger: GTTCCCACAAAGACCTACTCAAATGAAGTTGTCACA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGCCGGTACCATAGTGTaGCAACTTCATTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLAGTIV*QLHLSR
Trigger: CCTACTCAAATGAAGTTGTCACACTATGGTACCGGC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACCACGCAAAAATTCATaGTCGACACGTGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKPRKNS*STREMV
Trigger: AACCATTTCACGTGTCGATCATGAATTTTTGCGTGG...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGGTGGACTGTTTATCTaGAACTTTTCAAGATATCCA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQGGLFI*NFSRYP
Trigger: TGGATATCTTGAAAAGTTGCAGATAAACAGTCCACC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATGTGTTTCTCAGTCCTaGACAAAAATTGCAGCTATA +
Preference number: 4 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQCVSQS*TKIAAI
Trigger: TATAGCTGCAATTTTTGTGCAGGACTGAGAAACACA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAATGTAAAAGGTCTTTGTaGCATCTGCAGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKCKRSL*HLQLSG
Trigger: TCCTGAAAGCTGCAGATGGCACAAAGACCTTTTACA...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGATCCTGTGTACTGGTaGAGGAAGGAATGCATACTG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLDPVYW*RKECIL
Trigger: CAGTATGCATTCCTTCCTCCACCAGTACACAGGATC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAAAAGATCCTGTGTACTaGTGGAGGAAGGAATGCATA +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKKDPVY*WRKECI
Trigger: TATGCATTCCTTCCTCCACCAGTACACAGGATCTTT...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACTTCGACTCATTGGTTaGTCAAATGGTGGACTGTTT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKLRLIG*SNGGLF
Trigger: AAACAGTCCACCATTTGACCAACCAATGAGTCGAAG...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATAAACCACGTAGAATTTaGTACAGAAACAGCTTTACG +
Preference number: 4 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDKPRRI*YRNSFT
Trigger: CGTAAAGCTGTTTCTGTACCAAATTCTACGTGGTTT...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAATGAGGAGGTTCTGTaGTTTCAAGTCTCGATGCAA +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHNEEVL*FQVSMQ
Trigger: TTGCATCGAGACTTGAAACCACAGAACCTCCTCATT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATTGTGGGAACTGACTTaGCTCGGGCTAGTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLLWELT*LGLVQN
Trigger: ATTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGAAACATAAACAGTTGTaGAATGCACTGTACATTGGT +
Preference number: 4 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVKHKQL*NALYIG
Trigger: ACCAATGTACAGTGCATTCCACAACTGTTTATGTTT...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACAATTGAATGTGGCTTaGAAAATCCAGCAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLQLNVA*KIQQER
Trigger: CCGCTCTTGCTGGATTTTTCAAGCCACATTCAATTG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATCATACAGAAAAGTaGGTACGTGCAATGCTAAAC +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKHHTEK*VRAMLN
Trigger: GTTTAGCATTGCACGTACTCACTTTTCTGTATGATG...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAGGTTTCAAGTCTCGATaGAATACCTTTCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKGFKSR*NTFLLW
Trigger: CCATAGAAGAAAGGTATTGCATCGAGACTTGAAACC...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAAGTCGGAAAATTAAGTaGAGTTCATCTTCCACGGTT +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKSRKIK*SSSSTV
Trigger: AACCGTGGAAGATGAACTGCACTTAATTTTCCGACT...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAGAAGATTTACTGAGCTaGCCACATCATACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKEDLLS*PHHTEK
Trigger: CTTTTCTGTATGATGTGGGCAGCTCAGTAAATCTTC...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAACACCTGTAGGTGACTaGACTTCATCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLTPVGD*TSSDDV
Trigger: GACATCATCTGATGAAGTCCAGTCACCTACAGGTGT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATTGGTTGGTCAAATGGTaGACTGTTTATCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHWLVKW*TVYLQL
Trigger: AAGTTGCAGATAAACAGTCCACCATTTGACCAACCA...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATTGGTTGGTCAAATaGTGGACTGTTTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKHWLVK*WTVYLQ
Trigger: TTGCAGATAAACAGTCCACCATTTGACCAACCAATG...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGACCTTCGACTCATTaGTTGGTCAAATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLRPSTH*LVKWWT
Trigger: AGTCCACCATTTGACCAACCAATGAGTCGAAGGTCT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGTACACATGTTTCATaGCCTCTTCAGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSTHVS*PLQLKP
Trigger: GGGTTTCAGCTGAAGAGGCCATGAAACATGTGTACT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp CTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTAAACACACCTGTCTCTaGATAAGAAGAATTTCGAAA +
Preference number: 4 (lower is better)
Translates to: LCFEVMNLMTREAQDVSSKHTCL*IRRISK
Trigger: TTTCGAAATTCTTCTTATCCAGAGACAGGTGTGTTT...AGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGATCGACACGTGAAATaGTTTATGACAAACACACCT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHDRHVK*FMTNTP
Trigger: AGGTGTGTTTGTCATAAACCATTTCACGTGTCGATC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAAAAAGACTCCACTGTaGAGAGGACAGTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLKKTPL*RGQCRQ
Trigger: TTGTCTACACTGTCCTCTTCACAGTGGAGTCTTTTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGGGATTCACTTGCTTaGATCAACTTCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLRDSLA*INFCIT
Trigger: TGTGATGCAGAAGTTGATTCAAGCAAGTGAATCCCT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATGTTGGTGTCTAATGTaGGATCCTCAAAATGTCAGG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLCWCLM*DPQNVR
Trigger: CCTGACATTTTGAGGATCTCACATTAGACACCAACA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAGAACAATATCTAATCTaGTTCCATTTCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKEQYLI*FHFWAL
Trigger: CAATGCCCAGAAATGGAAGCAGATTAGATATTGTTC...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAGAACAATATCTAATCTaGTTCCATTTCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKEQYLI*FHFWAL
Trigger: CAATGCCCAGAAATGGAAGCAGATTAGATATTGTTC...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAGGTGGACTGTTTATCTaGAACTTTTCAAGATATCCA +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKGGLFI*NFSRYP
Trigger: TGGATATCTTGAAAAGTTGCAGATAAACAGTCCACC...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAATCCTTTATATACTGTTaGATATGTACCCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKSFIYC*ICTLSK
Trigger: CTTGGAGAGGGTACATATGCAACAGTATATAAAGGA...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAAACAGCTTTACGTTGTaGATACTCATGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKNSFTL*ILMMFP
Trigger: TGGAAACATCATGAGTATGCACAACGTAAAGCTGTT...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR GCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAACAGCTTTACGTTGTaGATACTCATGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHNSFTL*ILMMFP
Trigger: TGGAAACATCATGAGTATGCACAACGTAAAGCTGTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAAAGATCCTGTGTACTaGTGGAGGAAGGAATGCATA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLKDPVY*WRKECI
Trigger: TATGCATTCCTTCCTCCACCAGTACACAGGATCTTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACCACGTAGAATTTaGTACAGAAACAGCTTTACG +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHKPRRI*YRNSFT
Trigger: CGTAAAGCTGTTTCTGTACCAAATTCTACGTGGTTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAATGAGGAGGTTCTGTaGTTTCAAGTCTCGATGCAA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLNEEVL*FQVSMQ
Trigger: TTGCATCGAGACTTGAAACCACAGAACCTCCTCATT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGTCGGAAAATTAAGTaGAGTTCATCTTCCACGGTT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSRKIK*SSSSTV
Trigger: AACCGTGGAAGATGAACTGCACTTAATTTTCCGACT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAAGAAAAGTGAGTACGTaGAATGCTAAACATAAACAG +
Preference number: 4 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKRKVST*NAKHKQ
Trigger: CTGTTTATGTTTAGCATTGCACGTACTCACTTTTCT...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATGGTTGGTCAAATGGTaGACTGTTTATCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLWLVKW*TVYLQL
Trigger: AAGTTGCAGATAAACAGTCCACCATTTGACCAACCA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACCCATGTCCTGTCTCTaGATAAGAAGAATTTCGAAA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLPMSCL*IRRISK
Trigger: TTTCGAAATTCTTCTTATCCAGAGACAGGACATGGG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACACACCTGTCTCTaGATAAGAAGAATTTCGAAA +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHKHTCL*IRRISK
Trigger: TTTCGAAATTCTTCTTATCCAGAGACAGGTGTGTTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CCA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAACATAAACAGTTGTaGAATGCACTGTACATTGGT +
Preference number: 4 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHKHKQL*NALYIG
Trigger: ACCAATGTACAGTGCATTCCACAACTGTTTATGTTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAGCCAATTCAGACAATaGTTCATCAATAGTCTGACT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSQFRQ*FINSLT
Trigger: AGTCAGACTATTGATGAATCATTGTCTGAATTGGCT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR TCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACCCAAGAAAGAACTGTaGCTCAATAAAACCACATTT +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLPKKEL*LNKTTF
Trigger: AAATGTGGTTTTATTGAGTCACAGTTCTTTCTTGGG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGAACAATATCTAATCTaGTTCCATTTCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLEQYLI*FHFWAL
Trigger: CAATGCCCAGAAATGGAAGCAGATTAGATATTGTTC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATCCTTTATATACTGTTaGATATGTACCCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLSFIYC*ICTLSK
Trigger: CTTGGAGAGGGTACATATGCAACAGTATATAAAGGA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAACAGCTTTACGTTGTaGATACTCATGATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLNSFTL*ILMMFP
Trigger: TGGAAACATCATGAGTATGCACAACGTAAAGCTGTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAAACCACGTAGAATTTaGTACAGAAACAGCTTTACG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLKPRRI*YRNSFT
Trigger: CGTAAAGCTGTTTCTGTACCAAATTCTACGTGGTTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR GCA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAAACTTCTGCATCACATaGTTATCTAAACGTAATGTG +
Preference number: 4 (lower is better)
Translates to: CITCLSKRNVLVNLLATLNFCIT*LSKRNV
Trigger: CACATTACGTTTAGATAAGCATGTGATGCAGAAGTT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS GCA 90 bp GGGCTGAGACTGTCTGGCCGGGCGCTGGCTCCTTCTCCGCGGCTCTaGGGCGGCCCGCGGGGAGCTCAGGAGACTGCGGGCGGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: GLRLSGRALAPSPRL*GGPRGAQETAGGRV
Trigger: AACGCGGCCGCCCGCAGTCTCCTGAGCTCCCCGCGGGCCGCCGCAGAGCCGCGGAGAAGGAGCCAGCGCCCGGCCAGACAGTCTCAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS GCA 90 bp CCGCGGGTCCGGAGCCTCGGGAGGGGCCGCGGGTGTCTCACGCGTTaGCAAGTCCCTCGGTCAACATGGCTCCCGCGCCGACGAGCCGCG +
Preference number: 5 (lower is better)
Translates to: PRVRSLGRGRGCLTR*QVPRSTWLPRRRAA
Trigger: CGCGGCTCGTCGGCGCGGGAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCCGCGGCCCCTCCCGAGGCTCCGGACCCGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS GCA 90 bp TCCTTCTCCGCGGCTCTGCGGCGGCCCGCGGGGAGCTCAGGAGACTaGGGGCGGCCGCGTTCGCTCCTTGCGTGTGCGTCGCTTTCACAC +
Preference number: 5 (lower is better)
Translates to: SFSAALRRPAGSSGD*GRPRSLLACASLSH
Trigger: GTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCCCCGCGGGCCGCCGCAGAGCCGCGGAGAAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS GCA 90 bp GCCCGCGGGGAGCTCAGGAGACTGCGGGCGGCCGCGTTCGCTCCTTaGGTGTGCGTCGCTTTCACACTCGGCGGCTGCGGATTGACGCCT +
Preference number: 5 (lower is better)
Translates to: ARGELRRLRAAAFAP*VCVAFTLGGCGLTP
Trigger: AGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCCCCGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 90 bp GGGGAGCTCAGGAGACTGCGGGCGGCCGCGTTCGCTCCTTGCGTGTaGGTCGCTTTCACACTCGGCGGCTGCGGATTGACGCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: GELRRLRAAAFAPCV*VAFTLGGCGLTPPP
Trigger: AGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 90 bp GCCGCGTTCGCTCCTTGCGTGTGCGTCGCTTTCACACTCGGCGGCTaGGGATTGACGCCTCCGCCTGTTCCCCGGAGGAGAGCGAGTGCA +
Preference number: 5 (lower is better)
Translates to: AAFAPCVCVAFTLGG*GLTPPPVPRRRASA
Trigger: TGCACTCGCTCTCCTCCGGGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCCGGGTGTCTCACGCGTaGCCAAGTCCCTCGGTCAAC +
Preference number: 5 (lower is better)
Translates to: LMTREAQDVSSASGTRDGRVSHA*PSPSVN
Trigger: GTTGACCGAGGGACTTGGCAACGCGTGAGACACCCG...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCGGCCGCGTTCGCTCCTaGCGTGTGCGTCGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VMNLMTREAQDVSSASGTGRVRS*RVRRFH
Trigger: GTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCC...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS CCA 90 bp GGGCATTGCCATGAAGGAGCCAAGGCTCCCTCCAATAACACTGTGTaGTCTCCGCAATGGGGGCTTCTTGAAAGATCCTGTGTACTGGTG +
Preference number: 5 (lower is better)
Translates to: GHCHEGAKAPSNNTV*SPQWGLLERSCVLV
Trigger: CACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCGGAGACCACACAGTGTTATTGGAGGGAGCCTTGGCTCCTTCATGGCAATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS CCA 90 bp GAAGGAGCCAAGGCTCCCTCCAATAACACTGTGTGGTCTCCGCAATaGGGGCTTCTTGAAAGATCCTGTGTACTGGTGGAGGAAGGAATG +
Preference number: 5 (lower is better)
Translates to: EGAKAPSNNTVWSPQ*GLLERSCVLVEEGM
Trigger: CATTCCTTCCTCCACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCGGAGACCACACAGTGTTATTGGAGGGAGCCTTGGCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS CCA 90 bp AGATCCTGTGTACTGGTGGAGGAAGGAATGCATACTGTGAGACGTTaGAGGCCTGCCATTCTTCACAATAGGCTCAGCAAGAGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: RSCVLVEEGMHTVRR*RPAILHNRLSKSGD
Trigger: GTCCCCGCTCTTGCTGAGCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTACACAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542666.5
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGGCCGCGTTCGCTCCTaGCGTGTGCGTCGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQGRVRS*RVRRFH
Trigger: GTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATCTCGGCGGCTGCGGATaGACGCCTCCGCCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHLGGCG*TPPPVP
Trigger: GGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGAG...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACGGGTGTCTCACGCGTaGCCAAGTCCCTCGGTCAAC +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQRVSHA*PSPSVN
Trigger: GTTGACCGAGGGACTTGGCAACGCGTGAGACACCCG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCGTTCATCTTCCACGGTaGATCCTGGAAATAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LMTREAQDVSSASGTRDGVHLPR*ILEIKV
Trigger: GACCTTTATTTCCAGGATCAACCGTGGAAGATGAAC...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS CCA 90 bp AGATCCTGTGTACTGGTGGAGGAAGGAATGCATACTGTGAGACGTTaGAGGCCTGCCATTCTTCACAATAGGCTCATTATCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RSCVLVEEGMHTVRR*RPAILHNRLIILAA
Trigger: AGCAGCAAGGATAATGAGCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTACACAGGATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261211.8
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS-3UTR CAA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGCGCAATGGGGGCTTCTaGAAAGATCCTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVRNGGF*KDPVYW
Trigger: CCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCG...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS TCA 90 bp TTCTTGAAAGATCCTGTGTACTGGTGGAGGAAGGAATGCATACTGTaGGACGTTGGAGGCCTGCCATTCTTCACAATAGGCTCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: FLKDPVYWWRKECIL*DVGGLPFFTIGSAR
Trigger: TCTTGCTGAGCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTACACAGGATCTTTCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542666.5
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGCATACTGTGAGACGTaGGAGGCCTGCCATTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQAYCET*EACHSS
Trigger: TGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGCATACTGTGAGACGTaGGAGGCCTGCCATTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLQLLCFEVMNLMTREAQAYCET*EACHSS
Trigger: TGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGC...TTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTTTGTGGGAACTGACTaGGCTCGGGCTAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVFVGTD*ARASPK
Trigger: TTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAAA...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGAGACCTTCGACTCATaGGTTGGTCAAATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQETFDS*VGQMVD
Trigger: GTCCACCATTTGACCAACCAATGAGTCGAAGGTCTC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp CTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGGGATGGCTTCCTTTATATACTGTaGCATATGTACCCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LMTREAQDVSSASGTRDGFLYIL*HMYPLQ
Trigger: TTGGAGAGGGTACATATGCAACAGTATATAAAGGAA...GCCATCCCTGGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATTTGTGGGAACTGACTaGGCTCGGGCTAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQFVGTD*ARASPK
Trigger: TTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAAA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp ACCAGGGATGGCGTGTGCAGTGATCAAGCCAGGTCACTTGTAAAAGGTCTTTGTAAAACCCGGGTCCTTTaGCAACTGAATCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: TRDGVCSDQARSLVKGLCKTRVL*QLNLFQ
Trigger: TTGAAAGAGATTCAGTTGCAAAAGGACCCGGGTTTT...ACAAAGACCTTTTACAAGTGACCTGGCTTGATCACTGCACACGCCATCCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCTTCAGGATCCCTGACTaGACTGAGTCAGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: VMNLMTREAQDVSSASGTFRIPD*TESDFS
Trigger: AGAAAAATCTGACTCAGTCAAGTCAGGGATCCTGAA...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCACTTGTAAAAGGTCTTaGTGCCATCTGCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: VMNLMTREAQDVSSASGTTCKRS*CHLQLS
Trigger: TGAAAGCTGCAGATGGCACAAAGACCTTTTACAAGT...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAAGCATACTGTGAGACGTaGGAGGCCTGCCATTCTTCA +
Preference number: 5 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKAYCET*EACHSS
Trigger: TGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGC...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACGCAATGGGGGCTTCTaGAAAGATCCTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKRNGGF*KDPVYW
Trigger: CCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCG...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp CTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATCCTTCGACTCATTGGTaGGTCAAATGGTGGACTGTT +
Preference number: 5 (lower is better)
Translates to: LQLLCFEVMNLMTREAQDPSTHW*VKWWTV
Trigger: AACAGTCCACCATTTGACCAACCAATGAGTCGAAGG...ATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp CAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAGATGTGACATGTCAATCTGTGTaGAGTACTCCGAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: QLLCFEVMNLMTREAQDVTCQSV*STPRNQ
Trigger: TTGGTTCCTCGGAGTACTCAACACAGATTGACATGT...CACATCTTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 90 bp CGAGACCTTCGACTCATTGGTTGGTCAAATGGTGGACTGTTTATCTaGAACTTTTCAAGATATCCATCAGGTATTCTGATGTCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RDLRLIGWSNGGLFI*NFSRYPSGILMSAG
Trigger: GCCTGCAGACATCAGAATACCTGATGGATATCTTGAAAAGTTGCAGATAAACAGTCCACCATTTGACCAACCAATGAGTCGAAGGTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000551816.5
CDS-3UTR CAA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAGAGACCTTCGACTCATaGGTTGGTCAAATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKETFDS*VGQMVD
Trigger: GTCCACCATTTGACCAACCAATGAGTCGAAGGTCTC...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp GTGATGAACCTGATGACTAGGGAAGCACAAGATGTGTCTTCTGCCTCAGGTACCAGAAACAGCTTTACGTaGTGCATACTCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: VMNLMTREAQDVSSASGTRNSFT*CILMMF
Trigger: AAACATCATGAGTATGCACAACGTAAAGCTGTTTCT...GGTACCTGAGGCAGAAGACACATCTTGTGCTTCCCTAGTCATCAGGTTCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATTTTGTGGGAACTGACTaGGCTCGGGCTAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHFVGTD*ARASPK
Trigger: TTTTGGACTAGCCCGAGCCAAGTCAGTTCCCACAAA...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAACATGTCAATCTGTGTaGAGTACTCCGAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQTCQSV*STPRNQ
Trigger: TTGGTTCCTCGGAGTACTCAACACAGATTGACATGT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGTTCATCTTCCACGGTaGATCCTGGAAATAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQVHLPR*ILEIKV
Trigger: GACCTTTATTTCCAGGATCAACCGTGGAAGATGAAC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp GTCAGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCAGTAAAGCATGTATTCTaGGTCCCAGACTTCGAAAGT +
Preference number: 5 (lower is better)
Translates to: VSLQLLCFEVMNLMTREAVKHVF*VPDFES
Trigger: ACTTTCGAAGTCTGGGACCAAGAATACATGCTTTAC...TGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAGGCTGGGGGCTGGGCTaGAAACCATGTTATCAGACT +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLGWGLG*KPCYQT
Trigger: AGTCTGATAACATGGTTTCAAGCCCAGCCCCCAGCC...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAACAGGGATTCACTTGCTaGAATCAACTTCTGCATCAC +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQQGFTC*NQLLHH
Trigger: GTGATGCAGAAGTTGATTCAAGCAAGTGAATCCCTG...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATCAATTGAATGTGGCTaGAAAAATCCAGCAAGAGCG +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQSIECG*KNPARA
Trigger: CGCTCTTGCTGGATTTTTCAAGCCACATTCAATTGA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACGCAATGGGGGCTTCTaGAAAGATCCTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLRNGGF*KDPVYW
Trigger: CCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACCTTCGACTCATTGGTaGGTCAAATGGTGGACTGTT +
Preference number: 5 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKPSTHW*VKWWTV
Trigger: AACAGTCCACCATTTGACCAACCAATGAGTCGAAGG...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAGTAAAGCATGTATTCTaGGTCCCAGACTTCGAAAGT +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQVKHVF*VPDFES
Trigger: ACTTTCGAAGTCTGGGACCAAGAATACATGCTTTAC...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAAAAACCCGGGTCCTTTaGCAACTGAATCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQKTRVL*QLNLFQ
Trigger: TTGAAAGAGATTCAGTTGCAAAAGGACCCGGGTTTT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATACATGTCAATCTGTGTaGAGTACTCCGAGGAACCAA +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHTCQSV*STPRNQ
Trigger: TTGGTTCCTCGGAGTACTCAACACAGATTGACATGT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGTTCATCTTCCACGGTaGATCCTGGAAATAAAGGTC +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHVHLPR*ILEIKV
Trigger: GACCTTTATTTCCAGGATCAACCGTGGAAGATGAAC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS CCA 90 bp CCAATTTCTGATAAGGAAGCTCTACGAGACCTTCGACTCATTGGTTaGTCAAATGGTGGACTGTTTATCTGCAACTTTTCAAGATATCCA +
Preference number: 5 (lower is better)
Translates to: PISDKEALRDLRLIG*SNGGLFICNFSRYP
Trigger: TGGATATCTTGAAAAGTTGCAGATAAACAGTCCACCATTTGACCAACCAATGAGTCGAAGGTCTCGTAGAGCTTCCTTATCAGAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp AGTCTACAGCTTCTATGCTTCGAAGTGATGAACCTGATGACTAGGGAAGCACAAATAGGCTCATTATCCTaGCTGCTGTTTTCTTCAATA +
Preference number: 5 (lower is better)
Translates to: SLQLLCFEVMNLMTREAQIGSLS*LLFSSI
Trigger: TATTGAAGAAAACAGCAGCAAGGATAATGAGCCTAT...TTGTGCTTCCCTAGTCATCAGGTTCATCACTTCGAAGCATAGAAGCTGTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACCTTCGACTCATTGGTaGGTCAAATGGTGGACTGTT +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLPSTHW*VKWWTV
Trigger: AACAGTCCACCATTTGACCAACCAATGAGTCGAAGG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAATTCCTTTATATACTGTaGCATATGTACCCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQFLYIL*HMYPLQ
Trigger: TTGGAGAGGGTACATATGCAACAGTATATAAAGGAA...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGCTGTAACCTACTGGCTCTAATGGCAGAGAAGACCTTAAAACCGACTGTACAAAGAAACAGCTTTACGTaGTGCATACTCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: SCNLLALMAEKTLKPTVQRNSFT*CILMMF
Trigger: AAACATCATGAGTATGCACAACGTAAAGCTGTTTCT...TTGTACAGTCGGTTTTAAGGTCTTCTCTGCCATTAGAGCCAGTAGGTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATGTAAAGCATGTATTCTaGGTCCCAGACTTCGAAAGT +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHVKHVF*VPDFES
Trigger: ACTTTCGAAGTCTGGGACCAAGAATACATGCTTTAC...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAACCCGGGTCCTTTaGCAACTGAATCTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHKTRVL*QLNLFQ
Trigger: TTGAAAGAGATTCAGTTGCAAAAGGACCCGGGTTTT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAATTCAGGATCCCTGACTaGACTGAGTCAGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKFRIPD*TESDFS
Trigger: AGAAAAATCTGACTCAGTCAAGTCAGGGATCCTGAA...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp TTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATACTTGTAAAAGGTCTTaGTGCCATCTGCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: FTELPTSYRKVSTCNAKHTCKRS*CHLQLS
Trigger: TGAAAGCTGCAGATGGCACAAAGACCTTTTACAAGT...ATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTACAAGACCTTTCGCGTTaGAACAGACTTCTACGGTTA +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLQDLSR*NRLLRL
Trigger: TAACCGTAGAAGTCTGTTCAAACGCGAAAGGTCTTG...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp AGATTTACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAATTCCTTTATATACTGTaGCATATGTACCCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: RFTELPTSYRKVSTCNAKFLYIL*HMYPLQ
Trigger: TTGGAGAGGGTACATATGCAACAGTATATAAAGGAA...TTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGTAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp ACTGAGCTGCCCACATCATACAGAAAAGTGAGTACGTGCAATGCTAAACATAAAAGAAACAGCTTTACGTaGTGCATACTCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: TELPTSYRKVSTCNAKHKRNSFT*CILMMF
Trigger: AAACATCATGAGTATGCACAACGTAAAGCTGTTTCT...TTTATGTTTAGCATTGCACGTACTCACTTTTCTGTATGATGTGGGCAGCTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAATGTCAGGGATTCACTaGCTTGAATCAACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLMSGIH*LESTSA
Trigger: TGCAGAAGTTGATTCAAGCAAGTGAATCCCTGACAT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS TCA 90 bp TGGTCCCAGACTTCGAAAGTACACATGTTTCATGGCCTCTTCAGCTaGAACCCTTTTCTTAGATTCATACTGAAGAAATTTTGTTATCAA +
Preference number: 5 (lower is better)
Translates to: WSQTSKVHMFHGLFS*NPFLRFILKKFCYQ
Trigger: TTGATAACAAAATTTCTTCAGTATGAATCTAAGAAAAGGGTTTCAGCTGAAGAGGCCATGAAACATGTGTACTTTCGAAGTCTGGGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548422.1
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTATGGAGCTTTAATTTGTaGGTGTCTAATGTGAGATCC +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLWSFNL*VSNVRS
Trigger: GGATCTCACATTAGACACCAACAAATTAAAGCTCCA...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS-3UTR CAA 90 bp TGCATCACATGCTTATCTAAACGTAATGTGCTTGTCAATCTCTTAGCTACTCTAATAGGCTCATTATCCTaGCTGCTGTTTTCTTCAATA +
Preference number: 5 (lower is better)
Translates to: CITCLSKRNVLVNLLATLIGSLS*LLFSSI
Trigger: TATTGAAGAAAACAGCAGCAAGGATAATGAGCCTAT...TAGAGTAGCTAAGAGATTGACAAGCACATTACGTTTAGATAAGCATGTGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261211.8
CDS CAA 90 bp GCCGCGGGTCCGGAGCCTCGGGAGGGGCCGCGGGTGTCTCACGCGTaGCCAAGTCCCTCGGTCAACATGGCTCCCGCGCCGACGAGCCGC +
Preference number: 6 (lower is better)
Translates to: AAGPEPREGPRVSHA*PSPSVNMAPAPTSR
Trigger: GCGGCTCGTCGGCGCGGGAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCCGCGGCCCCTCCCGAGGCTCCGGACCCGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS GCA 72 bp GGGGAAGCTGCTCCGCGGACGCCCGCGGCGACCGGATaGAAGTCCGGGTCTCAGCGGCCGGCAGACGTGAGG +
Preference number: 6 (lower is better)
Translates to: GEAAPRTPAATG*KSGSQRPADVR
Trigger: CCTCACGTCTGCCGGCCGCTGAGACCCGGACTTGCATCCGGTCGCCGCGGGCGTCCGCGGAGCAGCTTCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS TCA 72 bp CCGGATGCAAGTCCGGGTCTCAGCGGCCGGCAGACGTaGGGCGCTTCCGAGCGCAGGCCTCCGCCGCCACAG +
Preference number: 6 (lower is better)
Translates to: PDASPGLSGRQT*GASERRPPPPQ
Trigger: CTGTGGCGGCGGAGGCCTGCGCTCGGAAGCGCCTCACGTCTGCCGGCCGCTGAGACCCGGACTTGCATCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS CAA 72 bp CCGGAGCCTCGGGAGGGGCCGCGGGTGTCTCACGCGTaGCCAAGTCCCTCGGTCAACATGGCTCCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: PEPREGPRVSHA*PSPSVNMAPAP
Trigger: CGGCGCGGGAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCCGCGGCCCCTCCCGAGGCTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS CAA 90 bp GGCCCGCGGGGAGCTCAGGAGACTGCGGGCGGCCGCGTTCGCTCCTaGCGTGTGCGTCGCTTTCACACTCGGCGGCTGCGGATTGACGCC +
Preference number: 6 (lower is better)
Translates to: GPRGAQETAGGRVRS*RVRRFHTRRLRIDA
Trigger: GGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCCCCGCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 72 bp CGGAGCCTCGGGAGGGGCCGCGGGTGTCTCACGCGTTaGCAAGTCCCTCGGTCAACATGGCTCCCGCGCCGA +
Preference number: 6 (lower is better)
Translates to: RSLGRGRGCLTR*QVPRSTWLPRR
Trigger: TCGGCGCGGGAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCCGCGGCCCCTCCCGAGGCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS CCA 72 bp GGGTGTCTCACGCGTTGCCAAGTCCCTCGGTCAACATaGCTCCCGCGCCGACGAGCCGCGCGGACGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GCLTRCQVPRST*LPRRRAARTAH
Trigger: GTGGGCCGTCCGCGCGGCTCGTCGGCGCGGGAGCCATGTTGACCGAGGGACTTGGCAACGCGTGAGACACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS CAA 72 bp GGAGCTCAGGAGACTGCGGGCGGCCGCGTTCGCTCCTaGCGTGTGCGTCGCTTTCACACTCGGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GAQETAGGRVRS*RVRRFHTRRLR
Trigger: CCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS GCA 72 bp GAGCTCAGGAGACTGCGGGCGGCCGCGTTCGCTCCTTaGGTGTGCGTCGCTTTCACACTCGGCGGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: ELRRLRAAAFAP*VCVAFTLGGCG
Trigger: TCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCTGAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261211.8
ENST00000543119.6
CDS TCA 72 bp GCGTGTGCGTCGCTTTCACACTCGGCGGCTGCGGATTaGCGCCTCCGCCTGTTCCCCGGAGGAGAGCGAGTG +
Preference number: 6 (lower is better)
Translates to: ACASLSHSAAAD*RLRLFPGGERV
Trigger: CACTCGCTCTCCTCCGGGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 72 bp AGGAGACTGCGGGCGGCCGCGTTCGCTCCTTGCGTGTaGGTCGCTTTCACACTCGGCGGCTGCGGATTGACG +
Preference number: 6 (lower is better)
Translates to: RRLRAAAFAPCV*VAFTLGGCGLT
Trigger: CGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGCGAACGCGGCCGCCCGCAGTCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS GCA 72 bp GCTCCTTGCGTGTGCGTCGCTTTCACACTCGGCGGCTaGGGATTGACGCCTCCGCCTGTTCCCCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: APCVCVAFTLGG*GLTPPPVPRRR
Trigger: TCTCCTCCGGGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCAAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS CAA 72 bp TGCGTGTGCGTCGCTTTCACACTCGGCGGCTGCGGATaGACGCCTCCGCCTGTTCCCCGGAGGAGAGCGAGT +
Preference number: 6 (lower is better)
Translates to: CVCVAFTLGGCG*TPPPVPRRRAS
Trigger: ACTCGCTCTCCTCCGGGGAACAGGCGGAGGCGTCAATCCGCAGCCGCCGAGTGTGAAAGCGACGCACACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543119.6
CDS TCA 72 bp TGTGGCTTGAAAAATCCTTCCCTCTACCTCCGCTCTTaGCCAACACTCCGGGGTGTGACCCGCCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: CGLKNPSLYLRS*PTLRGVTRQQE
Trigger: CTCCTGCTGGCGGGTCACACCCCGGAGTGTTGGTCAAGAGCGGAGGTAGAGGGAAGGATTTTTCAAGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552496.5
CDS CAA 72 bp ATGTGGCTTGAAAAATCCTTCCCTCTACCTCCGCTCTaGACCAACACTCCGGGGTGTGACCCGCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: MWLEKSFPLPPL*TNTPGCDPPAG
Trigger: TCCTGCTGGCGGGTCACACCCCGGAGTGTTGGTCAAGAGCGGAGGTAGAGGGAAGGATTTTTCAAGCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552496.5
CDS CCA 72 bp AAGGCTCCCTCCAATAACACTGTGTGGTCTCCGCAATaGGGGCTTCTTGAAAGATCCTGTGTACTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: KAPSNNTVWSPQ*GLLERSCVLVE
Trigger: CTCCACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCGGAGACCACACAGTGTTATTGGAGGGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS CCA 72 bp CATGAAGGAGCCAAGGCTCCCTCCAATAACACTGTGTaGTCTCCGCAATGGGGGCTTCTTGAAAGATCCTGT +
Preference number: 6 (lower is better)
Translates to: HEGAKAPSNNTV*SPQWGLLERSC
Trigger: ACAGGATCTTTCAAGAAGCCCCCATTGCGGAGACCACACAGTGTTATTGGAGGGAGCCTTGGCTCCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS TCA 72 bp GATCCTGTGTACTGGTGGAGGAAGGAATGCATACTGTaGGACGTTGGAGGCCTGCCATTCTTCACAATAGGC +
Preference number: 6 (lower is better)
Translates to: DPVYWWRKECIL*DVGGLPFFTIG
Trigger: GCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTACACAGGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS CCA 72 bp GTACTGGTGGAGGAAGGAATGCATACTGTGAGACGTTaGAGGCCTGCCATTCTTCACAATAGGCTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: VLVEEGMHTVRR*RPAILHNRLSK
Trigger: CTTGCTGAGCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542666.5
CDS CCA 72 bp GTCTGGCCTGGGCGGAAGAGCGAGACTCTGGGTGCGTaGTTAATTAGAGGCTGTGGTTTATATTTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: VWPGRKSETLGA*LIRGCGLYFGK
Trigger: CTTTCCAAAATATAAACCACAGCCTCTAATTAACCACGCACCCAGAGTCTCGCTCTTCCGCCCAGGCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550971.5
CDS CAA 72 bp CCAATAACACTGTGTGGTCTCCGCAATGGGGGCTTCTaGAAAGATCCTGTGTACTGGTGGAGGAAGGAATGC +
Preference number: 6 (lower is better)
Translates to: PITLCGLRNGGF*KDPVYWWRKEC
Trigger: GCATTCCTTCCTCCACCAGTACACAGGATCTTTCAAGAAGCCCCCATTGCGGAGACCACACAGTGTTATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS TCA 72 bp GAAAATGCAACCAACACCCCACATGTCAATCTGTGTTaGGTACTCCGAGGAACCAAGAAGCACATCAGGTGG +
Preference number: 6 (lower is better)
Translates to: ENATNTPHVNLC*VLRGTKKHIRW
Trigger: CCACCTGATGTGCTTCTTGGTTCCTCGGAGTACTCAACACAGATTGACATGTGGGGTGTTGGTTGCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000550971.5
ENST00000551484.1
CDS CCA 72 bp GTACTGGTGGAGGAAGGAATGCATACTGTGAGACGTTaGAGGCCTGCCATTCTTCACAATAGGCTCATTATC +
Preference number: 6 (lower is better)
Translates to: VLVEEGMHTVRR*RPAILHNRLII
Trigger: GATAATGAGCCTATTGTGAAGAATGGCAGGCCTCCAACGTCTCACAGTATGCATTCCTTCCTCCACCAGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261211.8
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS CAA 72 bp AGAAAATGCAACCAACACCCCACATGTCAATCTGTGTaGAGTACTCCGAGGAACCAAGAAGCACATCAGGTG +
Preference number: 6 (lower is better)
Translates to: RKCNQHPTCQSV*STPRNQEAHQV
Trigger: CACCTGATGTGCTTCTTGGTTCCTCGGAGTACTCAACACAGATTGACATGTGGGGTGTTGGTTGCATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000550971.5
ENST00000551484.1
CDS CCA 72 bp TGTATACGATTTCTGAGACAAACACCTGTAGGTGACTaGACTTCATCAGATGATGTCCCAGAAGCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: CIRFLRQTPVGD*TSSDDVPEAWS
Trigger: TGACCAAGCTTCTGGGACATCATCTGATGAAGTCCAGTCACCTACAGGTGTTTGTCTCAGAAATCGTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000551816.5
ENST00000552496.5
CDS TCA 72 bp TGTTCAGCCAATTCAGACAATGATTCATCAATAGTCTaGCTTCCTCGGAGTGTGAGGGATAGCCTTCTCTTA +
Preference number: 6 (lower is better)
Translates to: CSANSDNDSSIV*LPRSVRDSLLL
Trigger: TAAGAGAAGGCTATCCCTCACACTCCGAGGAAGTCAGACTATTGATGAATCATTGTCTGAATTGGCTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261211.8
ENST00000543119.6
ENST00000548734.1
ENST00000551816.5
ENST00000552262.1
ENST00000552496.5
CDS TCA 72 bp AACTCCTCATTTGAAGAAATACCTGGCCAAGTTTCCTaGGATGGAGTTCCTAGCAGTCGGAAAATTAAGTGC +
Preference number: 6 (lower is better)
Translates to: NSSFEEIPGQVS*DGVPSSRKIKC
Trigger: GCACTTAATTTTCCGACTGCTAGGAACTCCATCTCAGGAAACTTGGCCAGGTATTTCTTCAAATGAGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000549899.1
ENST00000550971.5
CDS CCA 72 bp AGCTCTACGAGACCTTCGACTCATTGGTTGGTCAAATaGTGGACTGTTTATCTGCAACTTTTCAAGATATCC +
Preference number: 6 (lower is better)
Translates to: SSTRPSTHWLVK*WTVYLQLFKIS
Trigger: GGATATCTTGAAAAGTTGCAGATAAACAGTCCACCATTTGACCAACCAATGAGTCGAAGGTCTCGTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000551816.5
CDS CAA 72 bp TTTCTGATAAGGAAGCTCTACGAGACCTTCGACTCATaGGTTGGTCAAATGGTGGACTGTTTATCTGCAACT +
Preference number: 6 (lower is better)
Translates to: FLIRKLYETFDS*VGQMVDCLSAT
Trigger: AGTTGCAGATAAACAGTCCACCATTTGACCAACCAATGAGTCGAAGGTCTCGTAGAGCTTCCTTATCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
CDS CCA 72 bp ACACGTGAAATGGTTTATGACAAACACACCTGTCTCTaGATAAGAAGAATTTCGAAAACCCGGGTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: TREMVYDKHTCL*IRRISKTRVLL
Trigger: CAAAAGGACCCGGGTTTTCGAAATTCTTCTTATCCAGAGACAGGTGTGTTTGTCATAAACCATTTCACGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542666.5
ENST00000543119.6
CDS CAA 90 bp CAAAGCCAATTTCTGATAAGGAAGCTCTACGAGACCTTCGACTCATaGGTTGGTCAAATGGTGGACTGTTTATCTGCAACTTTTCAAGAT +
Preference number: 6 (lower is better)
Translates to: QSQFLIRKLYETFDS*VGQMVDCLSATFQD
Trigger: ATCTTGAAAAGTTGCAGATAAACAGTCCACCATTTGACCAACCAATGAGTCGAAGGTCTCGTAGAGCTTCCTTATCAGAAATTGGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
CDS CAA 90 bp GAGTTCCTAGCAGTCGGAAAATTAAGTGCAGTTCATCTTCCACGGTaGATCCTGGAAATAAAGGTCTTCCAGAAGCCATTTCAAAGAAAA +
Preference number: 6 (lower is better)
Translates to: EFLAVGKLSAVHLPR*ILEIKVFQKPFQRK
Trigger: TTTTCTTTGAAATGGCTTCTGGAAGACCTTTATTTCCAGGATCAACCGTGGAAGATGAACTGCACTTAATTTTCCGACTGCTAGGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000549899.1
ENST00000550971.5
CDS CCA 72 bp TTTCTTCTATGGCAATATGCCAAACCACGTAGAATTTaGTACAGAAACAGCTTTACGTTGTGCATACTCATG +
Preference number: 6 (lower is better)
Translates to: FLLWQYAKPRRI*YRNSFTLCILM
Trigger: CATGAGTATGCACAACGTAAAGCTGTTTCTGTACCAAATTCTACGTGGTTTGGCATATTGCCATAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000553042.1
CDS TCA 72 bp ACTTCGAAAGTACACATGTTTCATGGCCTCTTCAGCTaGAACCCTTTTCTTAGATTCATACTGAAGAAATTT +
Preference number: 6 (lower is better)
Translates to: TSKVHMFHGLFS*NPFLRFILKKF
Trigger: AAATTTCTTCAGTATGAATCTAAGAAAAGGGTTTCAGCTGAAGAGGCCATGAAACATGTGTACTTTCGAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261211.8
ENST00000542666.5
ENST00000543119.6
ENST00000548422.1