RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK16 (Homo sapiens)

Ensembl gene IDs: ENSG00000102225

Ensembl transcript IDs: ENST00000276052.10, ENST00000357227.9, ENST00000428400.5, ENST00000457458.6, ENST00000462483.1, ENST00000462827.2, ENST00000493213.1, ENST00000517426.5, ENST00000517479.1, ENST00000517997.5, ENST00000518022.5, ENST00000518391.5, ENST00000519758.5, ENST00000520141.5, ENST00000520295.5, ENST00000520893.5, ENST00000522234.5, ENST00000522883.1, ENST00000523034.1, ENST00000523344.5, ENST00000523543.1, ENST00000523699.5, ENST00000622098.4

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCCCCAACCCTGCTTGTGCACATATGCACATTATGGCTCCTCGCTaGGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACCGAG +
Preference number: 1 (lower is better)
Translates to: SPNPACAHMHIMAPR*AGQFLAGPLPNSTE
Trigger: CTCGGTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAATGTGCATATGTGCACAAGCAGGGTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GRATRRGWGPASLYTEILPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR GCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 2 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR GCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 2 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 2 (lower is better)
Translates to: TILSESRSPAWASSGPLAHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR TCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: WPQCGRLARPCCPPATTKGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: TQGIVTILSESRSPAWASTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR TCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACCAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 2 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
3UTR-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWRLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: GRATRRGWGPASLYTEILRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACTTGCACAAAATACTGTaGGAGGGCCACACGCAGGGG +
Preference number: 2 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHLHKIL*EGHTQG
Trigger: CCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAA...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR CAA 90 bp GGGGCAGGCAGGAAAGCAGGCAGAGGATGCCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: GAGRKAGRGCLRLKA*SPSCLSRDPQPGLA
Trigger: AGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTTCCTGCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR CAA 90 bp GAAAGCAGGCAGAGGATGCCTCAGACTCAAGGCATTGTCACCATCTaGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTG +
Preference number: 2 (lower is better)
Translates to: ESRQRMPQTQGIVTI*SESRSPAWASSGPL
Trigger: CAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR TCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 2 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGCAGCAGGGGACAAGTaGGCAGGTGAACATGGCTCA +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWAAGDK*AGEHGS
Trigger: TGAGCCATGTTCACCTGCCCACTTGTCCCCTGCTGC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: TQGIVTILSESRSPAWASGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
3UTR-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCGAGTGGCTGTGGCATaGTTTCCCATAGCCAATCCC +
Preference number: 2 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWRVAVA*FPIANP
Trigger: GGGATTGGCTATGGGAAAGCATGCCACAGCCACTCG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR GCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: TRRGWGPASLYTEILHLKDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CAA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
3UTR GCA 72 bp AGGCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCATCCCTCCAGCCGCTG +
Preference number: 3 (lower is better)
Translates to: RQRVSREDVVGG*PVRGVASLQPL
Trigger: CAGCGGCTGGAGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
3UTR CCA 72 bp TGCACATTATGGCTCCTCGCTGAGCTGGTCAGTTCCTaGCAGGGCCCCTACCCAACAGCACCGAGTGGGATG +
Preference number: 3 (lower is better)
Translates to: CTLWLLAELVSS*QGPYPTAPSGM
Trigger: CATCCCACTCGGTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAATGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR-3UTR CAA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR TCA 72 bp CCTGCTTGTGCACATATGCACATTATGGCTCCTCGCTaGGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAAC +
Preference number: 3 (lower is better)
Translates to: PACAHMHIMAPR*AGQFLAGPLPN
Trigger: GTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAATGTGCATATGTGCACAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
3UTR CCA 72 bp TGCACAAAATACTGTGGGAGGGCCACACGCAGGGGGTaGGGCCCAGCCAGTCTGTATACAGAGATATTGCAT +
Preference number: 3 (lower is better)
Translates to: CTKYCGRATRRG*GPASLYTEILH
Trigger: ATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
3UTR-3UTR CAA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVLRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
3UTR CCA 72 bp TTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTaGGAGCAGGGCTTCATTGCACAAAATACTGTGGGA +
Preference number: 3 (lower is better)
Translates to: FQIGAVSLSLKG*EQGFIAQNTVG
Trigger: TCCCACAGTATTTTGTGCAATGAAGCCCTGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCCGCTCAGCCGGCCATaGGCTTGGCCGCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDPLSRP*AWPLRA
Trigger: CGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACCGCTCAGCCGGCCATaGGCTTGGCCGCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTPLSRP*AWPLRA
Trigger: CGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAGGTCTGATCGCGGAGTaGCGGCGGATCCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRGLIAE*RRIPGP
Trigger: CGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACC...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTTCAGCCATGGTTGCTaGGCCCGGGCCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRFSHGC*ARAAAG
Trigger: GCCGGCGGCGGCCCGGGCCCAGCAACCATGGCTGAA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACATGAGCTTGGCCGCTaGGGGCGATGCCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRHELGR*GRCPRT
Trigger: AGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGCCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGACGGAGGCGGCGGCTaGGGGGCTTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCDGGGG*GACQRW
Trigger: CCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRTATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCTATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTCGTTGGCGCCGGCTTaGATCCGAGTGCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDSLAPA*IRVLTA
Trigger: CGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTCGTTGGCGCCGGCTTaGATCCGAGTGCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCSLAPA*IRVLTA
Trigger: CGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGA...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGCTTCCCGGATGGCGGTaGAGGGTGCCCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKLPGWR*RVPPLH
Trigger: ATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAG...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCATGAGCTTGGCCGCTaGGGGCGATGCCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWHELGR*GRCPRT
Trigger: AGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGTCTTCAGCCATGGTTaGTGGGCCCGGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIVFSHG*WARAAA
Trigger: GGCGGCGGCCCGGGCCCAGCAACCATGGCTGAAGAC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCTCTGGACCCCTGGCTaGCCGTGGGGTAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCLWTPG*PWGSGP
Trigger: AGGACCACTACCCCACGGCCAGCCAGGGGTCCAGAG...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACGCCACACGCAGGGGGTaGGGCCCAGCCAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHATRRG*GPASLY
Trigger: ATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGC...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGCCACACGCAGGGGGTaGGGCCCAGCCAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCATRRG*GPASLY
Trigger: ATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTGCCCCCGGACTCGTTaGCGCCGGCTTGAATCCGAG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDCPRTR*RRLESE
Trigger: CTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGTAGTCTTCAGCCATaGTTGCTGGGCCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDSSLQP*LLGPGR
Trigger: GCGGCCCGGGCCCAGCAACCATGGCTGAAGACTACT...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAATCCGAGGACGTGGCTaGAGCCTGGTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRIRGRG*SLVTLP
Trigger: GGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGAT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACATCCGAGGACGTGGCTaGAGCCTGGTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDIRGRG*SLVTLP
Trigger: GGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGAT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGACGGAGGCGGCGGCTaGGGGGCTTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGDGGGG*GACQRW
Trigger: CCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCAATCTCAGATAGGCTaGCACGACGGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRQSQIG*HDGGGG
Trigger: GCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCACCCATCCAGGGACTaGCCCTGGAGACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCHPSRD*PWRLSL
Trigger: CAGGGACAGTCTCCAGGGTCAGTCCCTGGATGGGTG...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDAEWAP*RTKFPR
Trigger: CCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGC...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHAEWAP*RTKFPR
Trigger: CCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGC...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCCTCCAGCCGCTGCCTaGTGGGGCCTCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPPPAAA*WGLGLW
Trigger: CCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGG...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGGCTGGCACGGCCATaGTGTCCACCGGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRRLARP*CPPATE
Trigger: CTCAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462827.2
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGCTGTTCCTCCACCGTaGAGCCCGGAAAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRAVPPP*SPERGD
Trigger: GTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACTCTGGACCCCTGGCTaGCCGTGGGGTAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTLWTPG*PWGSGP
Trigger: AGGACCACTACCCCACGGCCAGCCAGGGGTCCAGAG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAAGATCCCCCTGCAACTaGGGATGGCGGGCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTRSPCN*GWRAGV
Trigger: TACCCCCGCCCGCCATCCCCAGTTGCAGGGGGATCT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAGAGCTGGTCAGTTCCTaGCAGGGCCCCTACCCAACA +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRELVSS*QGPYPT
Trigger: TGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTC...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACATAGGGGGCAACACCTaGGCACAACCCCTCACACCC +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDIGGNT*AQPLTP
Trigger: GGGTGTGAGGGGTTGTGCCCAGGTGTTGCCCCCTAT...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTCTTCATCCGATCCATaGCGATCGGCGGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSSSDP*RSAGAR
Trigger: GCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCGAGGACGTGGCTaGAGCCTGGTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGIRGRG*SLVTLP
Trigger: GGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGAT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCAATCTCAGATAGGCTaGCACGACGGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGQSQIG*HDGGGG
Trigger: GCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPTATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCGGCACAGAGCGGTCTaGTCGCGGAGTGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASRHRAV*SRSGGG
Trigger: TCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGTCGGCCAGGGCGTGTaGCCAGAATTGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRVGQGV*PELKDG
Trigger: CCCATCCTTCAATTCTGGGCACACGCCCTGGCCGAC...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACGTGCACAATCTCTGGTaGAGAGCTGAGTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDVHNLW*RAEWAP
Trigger: CGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACCTCAGTGGAGATCTTaGGTGGGGGATGGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRPQWRS*VGDGCA
Trigger: TGCGCAACCATCCCCCACGCAAGATCTCCACTGAGG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCTTCCCGGATGGCGGTaGAGGGTGCCCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLPGWR*RVPPLH
Trigger: ATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGRGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLARGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLARLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGTGGTGCAGAGCTGAGTaGGCCCCGTGCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILWCRAE*APCRTK
Trigger: CTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCA...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTGGTGCAGAGCTGAGTaGGCCCCGTGCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRWCRAE*APCRTK
Trigger: CTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGCTGTTCCTCCACCGTaGAGCCCGGAAAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAAVPPP*SPERGD
Trigger: GTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGCTGTTCCTCCACCGTaGAGCCCGGAAAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWAVPPP*SPERGD
Trigger: GTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGCTGTTCCTCCACCGTaGAGCCCGGAAAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTAVPPP*SPERGD
Trigger: GTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTCAAGTCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCSSRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGA...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACTCAAGTCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHSSRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGA...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTCAAGTCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRSSRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGCCACACGCAGGGGGTaGGGCCCAGCCAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPATRRG*GPASLY
Trigger: ATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATTCAGCCATGGTTGCTaGGCCCGGGCCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAFSHGC*ARAAAG
Trigger: GCCGGCGGCGGCCCGGGCCCAGCAACCATGGCTGAA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCGCCTAGGTGAGCAGTaGCCAGTAACCTGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGRLGEQ*PVTWRV
Trigger: GACGCGCCAGGTTACTGGCCACTGCTCACCTAGGCG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGAATTGAAGGATGGGTaGCATGGTCTCGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKELKDG*HGLEHG
Trigger: GCCGTGCTCGAGACCATGTCACCCATCCTTCAATTC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTGTCTTTGTTGGGATTaGCTTGGCTCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRCLCWD*LGSGQA
Trigger: GGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTGTCTTTGTTGGGATTaGCTTGGCTCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDCLCWD*LGSGQA
Trigger: GGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGTGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCACCCATCCAGGGACTaGCCCTGGAGACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIHPSRD*PWRLSL
Trigger: CAGGGACAGTCTCCAGGGTCAGTCCCTGGATGGGTG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTTGCTAGCGCCTAGGTaGGCAGTGGCCAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDLLAPR*AVASNL
Trigger: CAGGTTACTGGCCACTGCTCACCTAGGCGCTAGCAA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGTCGGCCAGGGCGTGTaGCCAGAATTGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGVGQGV*PELKDG
Trigger: CCCATCCTTCAATTCTGGGCACACGCCCTGGCCGAC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPAEWAP*RTKFPR
Trigger: CCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTGCGTGGGGGATGGTTaGGCATACGCACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRCVGDG*AYALSL
Trigger: CAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACCCTCAGTGGAGATCTTaGGTGGGGGATGGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHPQWRS*VGDGCA
Trigger: TGCGCAACCATCCCCCACGCAAGATCTCCACTGAGG...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACCTCAGTGGAGATCTTaGGTGGGGGATGGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRPQWRS*VGDGCA
Trigger: TGCGCAACCATCCCCCACGCAAGATCTCCACTGAGG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCCTCAGTGGAGATCTTaGGTGGGGGATGGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRPQWRS*VGDGCA
Trigger: TGCGCAACCATCCCCCACGCAAGATCTCCACTGAGG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGCTATCAAGTCGGGGTaGGTGGCTCAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCAIKSG*VAQKGL
Trigger: GAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPRGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCATCCCTCCAGCCGCTaGCTGCTGGGGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASHPSSR*LLGPRS
Trigger: AGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACGAGTGGCTGTGGCATaGTTTCCCATAGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRRVAVA*FPIANP
Trigger: GGGATTGGCTATGGGAAAGCATGCCACAGCCACTCG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGTCTTCAGCCATGGTTaGTGGGCCCGGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVVFSHG*WARAAA
Trigger: GGCGGCGGCCCGGGCCCAGCAACCATGGCTGAAGAC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACGCTCAGGGGCACCATTaGTCTTGTCTATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHAQGHH*SCLCLG
Trigger: GCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGC...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGACGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRDVAEA*SLSPSD
Trigger: GTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGTC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACCTCATCCGAGGACGTaGCTGAAGCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRPHPRT*LKPGHS
Trigger: AGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCCTCATCCGAGGACGTaGCTGAAGCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCPHPRT*LKPGHS
Trigger: AGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGG...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCTCATCCGAGGACGTaGCTGAAGCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILPHPRT*LKPGHS
Trigger: AGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTC +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDILRGG*LRIRTL
Trigger: GAGAGTGCGTATGCGCAACCATCCCCCACGCAAGAT...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACTGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCAGGGAAGATGTAGTTaGGGGCTGCCCTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGQGRCS*GLPCEG
Trigger: CCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGILSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGATPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTCTGGACCCCTGGCTaGCCGTGGGGTAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPLWTPG*PWGSGP
Trigger: AGGACCACTACCCCACGGCCAGCCAGGGGTCCAGAG...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGATCCCCCTGCAACTaGGGATGGCGGGCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWRSPCN*GWRAGV
Trigger: TACCCCCGCCCGCCATCCCCAGTTGCAGGGGGATCT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCAGATCCCCCTGCAACTaGGGATGGCGGGCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPRSPCN*GWRAGV
Trigger: TACCCCCGCCCGCCATCCCCAGTTGCAGGGGGATCT...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGGTCTGATCGCGGAGTaGCGGCGGATCCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAGLIAE*RRIPGP
Trigger: CGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTGCCCCCGGACTCGTTaGCGCCGGCTTGAATCCGAG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWCPRTR*RRLESE
Trigger: CTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAGTAGTCTTCAGCCATaGTTGCTGGGCCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGISSLQP*LLGPGR
Trigger: GCGGCCCGGGCCCAGCAACCATGGCTGAAGACTACT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGCGTGTGCCCAGAATTaGAGGATGGGTGACATGGTC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRACAQN*RMGDMV
Trigger: GACCATGTCACCCATCCTTCAATTCTGGGCACACGC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR TCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCAATCTCAGATAGGCTaGCACGACGGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPQSQIG*HDGGGG
Trigger: GCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTG...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASTATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACTCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGAAAGCTGGCCTGCCTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWESWPA*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGAAAGCTGGCCTGCCTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGESWPA*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTATGGCTCCTCGCTaGGCTGGTCAGTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCIMAPR*AGQFLA
Trigger: TGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAAT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGTCAGTTCTAGTCCCTTaGGGTGCTTGGGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILSVLVP*GAWGGR
Trigger: CCTTCCTCCCCAAGCACCTCAAGGGACTAGAACTGA...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTTCTCAGGTACAGCTaGAGTGATGGGCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILLLRYS*SDGPSH
Trigger: ATGGCTGGGCCCATCACTGCAGCTGTACCTGAGAAG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACATTGGTCTTGTCTATaGCTCGGCCACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRHWSCL*LGHLGV
Trigger: CACTCCGAGGTGGCCGAGGCATAGACAAGACCAATG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTCATCCAGGCCTATCTaGTCAGGGGCACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDSSRPI*SGAPLV
Trigger: GACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATCATCCAGGCCTATCTaGTCAGGGGCACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSSRPI*SGAPLV
Trigger: GACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWAEWAP*RTKFPR
Trigger: CCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGTGCACAATCTCTGGTaGAGAGCTGAGTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPVHNLW*RAEWAP
Trigger: CGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGTGCACAATCTCTGGTaGAGAGCTGAGTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIVHNLW*RAEWAP
Trigger: CGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGACTCTCACTGGAGACTaGACCTCATCCGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILTLTGD*TSSEDV
Trigger: CACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTGCGTGGGGGATGGTTaGGCATACGCACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLACVGDG*AYALSL
Trigger: CAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTGCGTGGGGGATGGTTaGGCATACGCACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGCVGDG*AYALSL
Trigger: CAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCTTCCCGGATGGCGGTaGAGGGTGCCCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWLPGWR*RVPPLH
Trigger: ATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGCTATCAAGTCGGGGTaGGTGGCTCAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAAIKSG*VAQKGL
Trigger: GAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACCGAGTGGCTGTGGCATaGTTTCCCATAGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHRVAVA*FPIANP
Trigger: GGGATTGGCTATGGGAAAGCATGCCACAGCCACTCG...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGAGCCCAGAGGAGGATaGGGCGCCAAGCCGGAGACG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSEREPRGG*GAKPET
Trigger: CGTCTCCGGCTTGGCGCCGCATCCTCCTCTGGGCTC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR GCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAACAAAGAGACCGGGGTaGGTGGCTCAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTTKRPG*VAQKGL
Trigger: GAGGCCCTTTTGAGCCACGCACCCCGGTCTCTTTGT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523344.5
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGCAGACTATTCCCTGTaGCCACAGGGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAADYSL*PQGPSS
Trigger: GGAAGAGGGTCCCTGTGGCCACAGGGAATAGTCTGC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGCTCAGGGGCACCATTaGTCTTGTCTATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTAQGHH*SCLCLG
Trigger: GCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGTGGAGATCTTGCGTaGGGGATGGTTGCGCATACG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSGDLA*GMVAHT
Trigger: CGTATGCGCAACCATCCCCCACGCAAGATCTCCACT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTGCCTTTGTAGACGGTaGCATAGGTACCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRCLCRR*HRYPRP
Trigger: TGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGTTGGACAGGATGCCTaGCCACGTCTCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTVGQDA*PRLLSW
Trigger: CCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAAC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTCAAGTCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPSSRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGCAGCAGGGGACAAGTaGGCAGGTGAACATGGCTCA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGAAGDK*AGEHGS
Trigger: TGAGCCATGTTCACCTGCCCACTTGTCCCCTGCTGC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCCTCTGGACCCCTGGCTaGCCGTGGGGTAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVLWTPG*PWGSGP
Trigger: AGGACCACTACCCCACGGCCAGCCAGGGGTCCAGAG...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATTGCACAAAATACTGTaGGAGGGCCACACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRLHKIL*EGHTQG
Trigger: CCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTAGATCCCCCTGCAACTaGGGATGGCGGGCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSRSPCN*GWRAGV
Trigger: TACCCCCGCCCGCCATCCCCAGTTGCAGGGGGATCT...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGAGCTGGTCAGTTCCTaGCAGGGCCCCTACCCAACA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIELVSS*QGPYPT
Trigger: TGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCAGTGGCCAGTAACCTaGCGCGTCAATCACCACTCG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGQWPVT*RVNHHS
Trigger: CGAGTGGTGATTGACGCGCCAGGTTACTGGCCACTG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCAGAGACCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPRDRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGGTCTCT...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523344.5
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGAATTGAAGGATGGGTaGCATGGTCTCGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGELKDG*HGLEHG
Trigger: GCCGTGCTCGAGACCATGTCACCCATCCTTCAATTC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKTSECH*QLPFDL
Trigger: AAGATCAAACGGCAGCTGTCAATGACACTCCGAGGT...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR TCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTATCCGAGGACGTGGCTaGAGCCTGGTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSIRGRG*SLVTLP
Trigger: GGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGAT...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACGTGATAGGCGCTTGTTaGTGTCCTCAGTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDVIGAC*CPQWRS
Trigger: AGATCTCCACTGAGGACATCAACAAGCGCCTATCAC...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCAAAGATGGGGCTATTaGGGGTCAGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRQRWGY*GSASPG
Trigger: ACCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGACGGAGGCGGCGGCTaGGGGGCTTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERDGGGG*GACQRW
Trigger: CCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACACTCAAAGACAAGGGTaGGGGACTTCTCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHTQRQG*GTSPCG
Trigger: TCCACACGGAGAAGTCCCTCACCCTTGTCTTTGAGT...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACACTCAAAGACAAGGGTaGGGGACTTCTCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDTQRQG*GTSPCG
Trigger: TCCACACGGAGAAGTCCCTCACCCTTGTCTTTGAGT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTGTCTTTGTTGGGATTaGCTTGGCTCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPCLCWD*LGSGQA
Trigger: GGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTGTCTTTGTTGGGATTaGCTTGGCTCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGICLCWD*LGSGQA
Trigger: GGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERTATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAACTGCAACAGCTTGGTaGGGAGGTCGGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGATATAW*GGRPRR
Trigger: GCGACGGGGCCGACCTCCTCACCAAGCTGTTGCAGT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGAAAGCTGGCCTGCCTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIESWPA*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGAAAGCTGGCCTGCCTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPESWPA*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACGGCACAGAGCGGTCTaGTCGCGGAGTGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKRHRAV*SRSGGG
Trigger: TCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGAGGTTCGCGAGAAGATaGCTTTTCGAGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRRFARR*LFEERQ
Trigger: CTGCCTCTCCTCGAAAAGTCATCTTCTCGCGAACCT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCTTCTCAGGTACAGCTaGAGTGATGGGCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLLRYS*SDGPSH
Trigger: ATGGCTGGGCCCATCACTGCAGCTGTACCTGAGAAG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR GCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCATTGGTCTTGTCTATaGCTCGGCCACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWHWSCL*LGHLGV
Trigger: CACTCCGAGGTGGCCGAGGCATAGACAAGACCAATG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCATTGGTCTTGTCTATaGCTCGGCCACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAHWSCL*LGHLGV
Trigger: CACTCCGAGGTGGCCGAGGCATAGACAAGACCAATG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTCATCCAGGCCTATCTaGTCAGGGGCACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSSRPI*SGAPLV
Trigger: GACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR GCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGTGCACAATCTCTGGTaGAGAGCTGAGTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPVHNLW*RAEWAP
Trigger: CGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCACTCTCACTGGAGACTaGACCTCATCCGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGTLTGD*TSSEDV
Trigger: CACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRQSSRY*FRSLSR
Trigger: CCTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGCCATCTCATAGAAGATaGAGCCCACACCCCACATGT +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKPSHRR*SPHPTC
Trigger: ACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGG...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCCTCGTTGGACAGGATaGCTGGCCACGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWPRWTG*LATSPQ
Trigger: CTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGCTATCAAGTCGGGGTaGGTGGCTCAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIAIKSG*VAQKGL
Trigger: GAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGTTTCATGGCATCCTCTaGGGAGATCCGATTTCGACC +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKFHGIL*GDPIST
Trigger: GGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAA...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSRGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCGCGGAAAGCTGGCCTaGCTGAGTCAGGCATCGACG +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASRGKLA*LSQAST
Trigger: CGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGCG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVRLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACGGAGCAGGGCTTCATTaGACAAAATACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDGAGLH*TKYCGR
Trigger: CCTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCC...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACGGCTTGAATCCGAGTaGTCACGGCGGCTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARLESE*SRRLAA
Trigger: TGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGCAGACTATTCCCTGTaGCCACAGGGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPADYSL*PQGPSS
Trigger: GGAAGAGGGTCCCTGTGGCCACAGGGAATAGTCTGC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGCTCAGGGGCACCATTaGTCTTGTCTATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIAQGHH*SCLCLG
Trigger: GCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCTCGTGCACAATCTCTaGTGCAGAGCTGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGILVHNL*CRAEWA
Trigger: GGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCTCGTGCACAATCTCTaGTGCAGAGCTGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPLVHNL*CRAEWA
Trigger: GGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAG...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGACGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPDVAEA*SLSPSD
Trigger: GTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGTC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCATCCGAGGACGTaGCTGAAGCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIPHPRT*LKPGHS
Trigger: AGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCATACGCACTCTCACTaGAGACTGCACCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCHTHSH*RLHLIR
Trigger: TCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATG...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWILRGG*LRIRTL
Trigger: GAGAGTGCGTATGCGCAACCATCCCCCACGCAAGAT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCAGTGGAGATCTTGCGTaGGGGATGGTTGCGCATACG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSGDLA*GMVAHT
Trigger: CGTATGCGCAACCATCCCCCACGCAAGATCTCCACT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAAGTGGAGATCTTGCGTaGGGGATGGTTGCGCATACG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTSGDLA*GMVAHT
Trigger: CGTATGCGCAACCATCCCCCACGCAAGATCTCCACT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTGCCTTTGTAGACGGTaGCATAGGTACCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGCLCRR*HRYPRP
Trigger: TGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLARPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTRPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDLLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGAGTGGAGTAGTCCGTaGACCCAAGCAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAEWSSP*TQAGCQ
Trigger: CTGACATCCTGCTTGGGTCCACGGACTACTCCACTC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGTTGGACAGGATGCCTaGCCACGTCTCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPVGQDA*PRLLSW
Trigger: CCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAAC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGTTGGACAGGATGCCTaGCCACGTCTCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIVGQDA*PRLLSW
Trigger: CCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAAC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGCAGCAGGGGACAAGTaGGCAGGTGAACATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPAAGDK*AGEHGS
Trigger: TGAGCCATGTTCACCTGCCCACTTGTCCCCTGCTGC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCAATGGTGGGGTGTTTaGGCAGGCAGCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIQWWGV*AGSRGQ
Trigger: TTGTCCCCTGCTGCCTGCCCAAACACCCCACCATTG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCCTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAACCCCTGGCTGGCCGTaGGGTAGTGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKTPGWP*GSGPGG
Trigger: GCCCCCAGGACCACTACCCCACGGCCAGCCAGGGGT...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTCTGGACCCCTGGCTaGCCGTGGGGTAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERLWTPG*PWGSGP
Trigger: AGGACCACTACCCCACGGCCAGCCAGGGGTCCAGAG...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGCCACACGCAGGGGGTaGGGCCCAGCCAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAATRRG*GPASLY
Trigger: ATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACATTGCACAAAATACTGTaGGAGGGCCACACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTLHKIL*EGHTQG
Trigger: CCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAA...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGATAGGGGGCAACACCTaGGCACAACCCCTCACACCC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWIGGNT*AQPLTP
Trigger: GGGTGTGAGGGGTTGTGCCCAGGTGTTGCCCCCTAT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTCTTCATCCGATCCATaGCGATCGGCGGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVSSSDP*RSAGAR
Trigger: GCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGGTACATCCCCATGGTaGCAAACGGGACTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: WPQCGRLARPCCPPATTKGTSPW*QTGLLQ
Trigger: TTGCAAAAGTCCCGTTTGCCACCATGGGGATGTACC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR TCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACATCAGATTTAGGTGGCTaGTTGAGGGCAAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTSDLGG*LRARAL
Trigger: TAGGGCCCTTGCCCTCAATCAGCCACCTAAATCTGA...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR TCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACTTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDLTAAV*SSSSDP
Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRTSECH*QLPFDL
Trigger: AAGATCAAACGGCAGCTGTCAATGACACTCCGAGGT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCAATCTCAGATAGGCTaGCACGACGGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVQSQIG*HDGGGG
Trigger: GCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACAATCTCAGATAGGCTaGCACGACGGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAQSQIG*HDGGGG
Trigger: GCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGACTCAAAGACAAGGGTaGGGGACTTCTCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWTQRQG*GTSPCG
Trigger: TCCACACGGAGAAGTCCCTCACCCTTGTCTTTGAGT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGTCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCACCCATCCAGGGACTaGCCCTGGAGACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERHPSRD*PWRLSL
Trigger: CAGGGACAGTCTCCAGGGTCAGTCCCTGGATGGGTG...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGAGAGCGGAGTGTCATTaGCAGCTGCCGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILRAECH*QLPFDL
Trigger: AAGATCAAACGGCAGCTGTCAATGACACTCCGCTCT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCATTGGTCTTGTCTATaGCTCGGCCACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIHWSCL*LGHLGV
Trigger: CACTCCGAGGTGGCCGAGGCATAGACAAGACCAATG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCACTCTCACTGGAGACTaGACCTCATCCGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGITLTGD*TSSEDV
Trigger: CACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTGCGTGGGGGATGGTTaGGCATACGCACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWCVGDG*AYALSL
Trigger: CAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCCATCTCATAGAAGATaGAGCCCACACCCCACATGT +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRPSHRR*SPHPTC
Trigger: ACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGCTATCAAGTCGGGGTaGGTGGCTCAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWAIKSG*VAQKGL
Trigger: GAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGATGTAGTTGGGGGCTaGCCTGTGAGGGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSDVVGG*PVRGVA
Trigger: TGCCACACCCCTCACAGGGCAGCCCCCAACTACATC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERRLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCAGGCTGGCACGGCCATaGTGTCCACCGGCAACTACC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVRLARP*CPPATT
Trigger: GGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCT...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGGAGCAGGGCTTCATTaGACAAAATACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRGAGLH*TKYCGR
Trigger: CCTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCGAGTGGCTGTGGCATaGTTTCCCATAGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIRVAVA*FPIANP
Trigger: GGGATTGGCTATGGGAAAGCATGCCACAGCCACTCG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACATACAGCGATTATGGTaGATTCAGGAACCCAACCCC +
Preference number: 4 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDIQRLW*IQEPNP
Trigger: GGGGTTGGGTTCCTGAATGCACCATAATCGCTGTAT...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACCGTCGCTATCAAGTCTaGCACAAGGACAAAGAGACC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRRYQV*HKDKET
Trigger: GGTCTCTTTGTCCTTGTGGCAGACTTGATAGCGACG...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523344.5
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGCACGGCCATAGAGTaGCATAGTTCCCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPSTAIE*HSSPST
Trigger: GGTGCTAGGGGAACTATGCCACTCTATGGCCGTGCT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGTTCTCAGATTTAGGTaGCTGATTGAGGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRVLRFR*LIEGKG
Trigger: GCCCTTGCCCTCAATCAGCCACCTAAATCTGAGAAC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTTGGTGCAGAGCTGAGTaGGCCCCGTGCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSWCRAE*APCRTK
Trigger: CTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCA...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCTCGTGCACAATCTCTaGTGCAGAGCTGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWLVHNL*CRAEWA
Trigger: GGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCATACGCACTCTCACTaGAGACTGCACCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGHTHSH*RLHLIR
Trigger: TCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIILRGG*LRIRTL
Trigger: GAGAGTGCGTATGCGCAACCATCCCCCACGCAAGAT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAGTGGAGATCTTGCGTaGGGGATGGTTGCGCATACG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGISGDLA*GMVAHT
Trigger: CGTATGCGCAACCATCCCCCACGCAAGATCTCCACT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPRPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLALLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGAGTGGAGTAGTCCGTaGACCCAAGCAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIEWSSP*TQAGCQ
Trigger: CTGACATCCTGCTTGGGTCCACGGACTACTCCACTC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAGAGGGGACGGCCTGTaGCCATCTCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIRGDGL*PSHRRC
Trigger: GCATCTTCTATGAGATGGCCACAGGCCGTCCCCTCT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGAGGGGACGGCCTGTaGCCATCTCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPRGDGL*PSHRRC
Trigger: GCATCTTCTATGAGATGGCCACAGGCCGTCCCCTCT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCAAGTCGGGGTGCGTaGCTCAAAAGGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASSSRGA*LKRASA
Trigger: AGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGA...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAAGAATGGATGTTTCATaGCATCCTCTGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRRMDVS*HPLRRS
Trigger: GGATCTCCGCAGAGGATGCCATGAAACATCCATTCT...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILTKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKPAAAC*GLGLWL
Trigger: AAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGCAGCAGGGGACAAGTaGGCAGGTGAACATGGCTCA +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPAAGDK*AGEHGS
Trigger: TGAGCCATGTTCACCTGCCCACTTGTCCCCTGCTGC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAGCTGGTCAGTTCCTaGCAGGGCCCCTACCCAACA +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSELVSS*QGPYPT
Trigger: TGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCATAGGGGGCAACACCTaGGCACAACCCCTCACACCC +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVIGGNT*AQPLTP
Trigger: GGGTGTGAGGGGTTGTGCCCAGGTGTTGCCCCCTAT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRLTAAV*SSSSDP
Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRLTAAV*SSSSDP
Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGTGATAGGCGCTTGTTaGTGTCCTCAGTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAVIGAC*CPQWRS
Trigger: AGATCTCCACTGAGGACATCAACAAGCGCCTATCAC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGACGGAGGCGGCGGCTaGGGGGCTTGTCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKDGGGG*GACQRW
Trigger: CCATCTTTGACAAGCCCCTCAGCCGCCGCCTCCGTC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTACTCAAAGACAAGGGTaGGGGACTTCTCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPTQRQG*GTSPCG
Trigger: TCCACACGGAGAAGTCCCTCACCCTTGTCTTTGAGT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTGTCTTTGTTGGGATTaGCTTGGCTCGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVCLCWD*LGSGQA
Trigger: GGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACA...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRGSCMS*TPRWTG
Trigger: TCCTGTCCAACGAGGAGTTCAAGACATACAACTACC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHGSCMS*TPRWTG
Trigger: TCCTGTCCAACGAGGAGTTCAAGACATACAACTACC...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGCTGGCCTGCCTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSESWPA*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCGGACAAGTGGGCAGGTaGACATGGCTCAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASGQVGR*TWLRQV
Trigger: TACCTGCCTGAGCCATGTTCACCTGCCCACTTGTCC...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAAGGCCCACACAATATaGGGCAGGTGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERKAHTI*GRWGRQ
Trigger: CTGCCTGCCCCACCTGCCTCATATTGTGTGGGCCTT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGATTATGGCTCCTCGCTaGGCTGGTCAGTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWIMAPR*AGQFLA
Trigger: TGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAAT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCTCATCCAGGCCTATCTaGTCAGGGGCACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPSSRPI*SGAPLV
Trigger: GACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGA...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGATCTTCAAGTCCTCGTaGACAATCTCTGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILIFKSS*TISGAE
Trigger: CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGAT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACATCTTCAAGTCCTCGTaGACAATCTCTGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHIFKSS*TISGAE
Trigger: CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGAT...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPQSSRY*FRSLSR
Trigger: CCTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCCATCTCATAGAAGATaGAGCCCACACCCCACATGT +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAPSHRR*SPHPTC
Trigger: ACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTTTCGACCCTCAAACTaGAACAGCTTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGFRPSN*NSLVRR
Trigger: CCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTTTCGACCCTCAAACTaGAACAGCTTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAFRPSN*NSLVRR
Trigger: CCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTGCTTGTGCACATATaGACATTATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILLLVHI*TLWLLA
Trigger: AGCGAGGAGCCATAATGTGCATATGTGCACAAGCAG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCCTGCTTGTGCACATATaGACATTATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCLLVHI*TLWLLA
Trigger: AGCGAGGAGCCATAATGTGCATATGTGCACAAGCAG...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATACAGCGATTATGGTaGATTCAGGAACCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCIQRLW*IQEPNP
Trigger: GGGGTTGGGTTCCTGAATGCACCATAATCGCTGTAT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACGGCTTGAATCCGAGTaGTCACGGCGGCTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKRLESE*SRRLAA
Trigger: TGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGACTAACGATGGATTGTTaGGATCTAGGGGAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRLTMDC*DLGEKP
Trigger: GGGCTTTTCCCCTAGATCCCAACAATCCATCGTTAG...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCGCTCAGGGGCACCATTaGTCTTGTCTATGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASAQGHH*SCLCLG
Trigger: GCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGC...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCGACGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASDVAEA*SLSPSD
Trigger: GTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGTC...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCCTCATCCGAGGACGTaGCTGAAGCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASPHPRT*LKPGHS
Trigger: AGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCATACGCACTCTCACTaGAGACTGCACCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIHTHSH*RLHLIR
Trigger: TCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPLLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGTTGGACAGGATGCCTaGCCACGTCTCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSVGQDA*PRLLSW
Trigger: CCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAAC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGAATGGATGTTTCATaGCATCCTCTGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRMDVS*HPLRRS
Trigger: GGATCTCCGCAGAGGATGCCATGAAACATCCATTCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLATKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWTKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTTKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCGCAGCAGGGGACAAGTaGGCAGGTGAACATGGCTCA +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVAAGDK*AGEHGS
Trigger: TGAGCCATGTTCACCTGCCCACTTGTCCCCTGCTGC...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGACAGGCCAATGGGTaGGTTGACAGGCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWRQANG*VDRPMV
Trigger: CACCATTGGCCTGTCAACCCACCCATTGGCCTGTCT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCACATATGCACATTATaGCTCCTCGCTGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAHICTL*LLAELV
Trigger: GACCAGCTCAGCGAGGAGCCATAATGTGCATATGTG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCACATATGCACATTATaGCTCCTCGCTGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGHICTL*LLAELV
Trigger: GACCAGCTCAGCGAGGAGCCATAATGTGCATATGTG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAATAGGGGGCAACACCTaGGCACAACCCCTCACACCC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAIGGNT*AQPLTP
Trigger: GGGTGTGAGGGGTTGTGCCCAGGTGTTGCCCCCTAT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCTACTCGGTCTCACTTaGTACATCCCCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGILLGLT*YIPMVA
Trigger: TGCCACCATGGGGATGTACCAAGTGAGACCGAGTAG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCACTCAGTTCCGATCTTaGCAGAAGTTTGCTAGCGCC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGTQFRS*QKFASA
Trigger: GGCGCTAGCAAACTTCTGCCAAGATCGGAACTGAGT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR CCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTCTTCATCCGATCCATaGCGATCTCGGACTGCATGT +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLASSSDP*RSRTAC
Trigger: ACATGCAGTCCGAGATCGCCATGGATCGGATGAAGA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGTTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWLTAAV*SSSSDP
Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAATCCGAGGACGTGGCTaGAGCCTGGTCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKIRGRG*SLVTLP
Trigger: GGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGAT...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGTGATAGGCGCTTGTTaGTGTCCTCAGTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIVIGAC*CPQWRS
Trigger: AGATCTCCACTGAGGACATCAACAAGCGCCTATCAC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGTGATAGGCGCTTGTTaGTGTCCTCAGTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPVIGAC*CPQWRS
Trigger: AGATCTCCACTGAGGACATCAACAAGCGCCTATCAC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCAAAGATGGGGCTATTaGGGGTCAGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPQRWGY*GSASPG
Trigger: ACCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTG...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCCACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGPQGCL*ACFCLC
Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTGG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLAGSCMS*TPRWTG
Trigger: TCCTGTCCAACGAGGAGTTCAAGACATACAACTACC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGGSCMS*TPRWTG
Trigger: TCCTGTCCAACGAGGAGTTCAAGACATACAACTACC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWGSCMS*TPRWTG
Trigger: TCCTGTCCAACGAGGAGTTCAAGACATACAACTACC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTTGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACACCCATCCAGGGACTaGCCCTGGAGACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKHPSRD*PWRLSL
Trigger: CAGGGACAGTCTCCAGGGTCAGTCCCTGGATGGGTG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCTGTCCACCGGCAACTaGGTCAGGCATCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVLSTGN*VRHRRR
Trigger: TCTTCGTCGATGCCTGACTCAGTTGCCGGTGGACAG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462827.2
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTTCAAGTCCTCGTaGACAATCTCTGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGIFKSS*TISGAE
Trigger: CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGAT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTACTCTCACTGGAGACTaGACCTCATCCGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSTLTGD*TSSEDV
Trigger: CACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGT...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCACTCTCACTGGAGACTaGACCTCATCCGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVTLTGD*TSSEDV
Trigger: CACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATGCGTGGGGGATGGTTaGGCATACGCACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGACVGDG*AYALSL
Trigger: CAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACTTCCCGGATGGCGGTaGAGGGTGCCCCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKLPGWR*RVPPLH
Trigger: ATGAAGAGGGGGCACCCTGCACCGCCATCCGGGAAG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWQSSRY*FRSLSR
Trigger: CCTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCCATCTCATAGAAGATaGAGCCCACACCCCACATGT +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPPSHRR*SPHPTC
Trigger: ACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGG...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTTTCGACCCTCAAACTaGAACAGCTTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIFRPSN*NSLVRR
Trigger: CCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTTTCATGGCATCCTCTaGGGAGATCCGATTTCGACC +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPFHGIL*GDPIST
Trigger: GGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGGAGCAGGGCTTCATTaGACAAAATACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPGAGLH*TKYCGR
Trigger: CCTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCTGCTTGTGCACATATaGACATTATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLLVHI*TLWLLA
Trigger: AGCGAGGAGCCATAATGTGCATATGTGCACAAGCAG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGATACAGCGATTATGGTaGATTCAGGAACCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWIQRLW*IQEPNP
Trigger: GGGGTTGGGTTCCTGAATGCACCATAATCGCTGTAT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCAGCACGGCCATAGAGTaGCATAGTTCCCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVSTAIE*HSSPST
Trigger: GGTGCTAGGGGAACTATGCCACTCTATGGCCGTGCT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCCTAACGATGGATTGTTaGGATCTAGGGGAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLTMDC*DLGEKP
Trigger: GGGCTTTTCCCCTAGATCCCAACAATCCATCGTTAG...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTCGTGCACAATCTCTaGTGCAGAGCTGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERLVHNL*CRAEWA
Trigger: GGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAG...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGACGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVDVAEA*SLSPSD
Trigger: GTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGTC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASILRGG*LRIRTL
Trigger: GAGAGTGCGTATGCGCAACCATCCCCCACGCAAGAT...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTGCCTTTGTAGACGGTaGCATAGGTACCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVCLCRR*HRYPRP
Trigger: TGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCA...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCAGGGACTTCTCCGTGTaGATAATGTCATGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCRDFSV*IMSCSV
Trigger: TACGCTACATGACATTATCCACACGGAGAAGTCCCT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGGGACTTCTCCGTGTaGATAATGTCATGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRDFSV*IMSCSV
Trigger: TACGCTACATGACATTATCCACACGGAGAAGTCCCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCGAGTGGAGTAGTCCGTaGACCCAAGCAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVEWSSP*TQAGCQ
Trigger: CTGACATCCTGCTTGGGTCCACGGACTACTCCACTC...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCAGAGGGGACGGCCTGTaGCCATCTCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASRGDGL*PSHRRC
Trigger: GCATCTTCTATGAGATGGCCACAGGCCGTCCCCTCT...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGCTGTTCCTCCACCGTaGAGCCCGGAAAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKAVPPP*SPERGD
Trigger: GTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGTTGGACAGGATGCCTaGCCACGTCTCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVVGQDA*PRLLSW
Trigger: CCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAAC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPTKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGITKTEG*PPFVAE
Trigger: TTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTGGGGCCTCGGTCTGTaGCTTAGAACTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVWGLGL*LRTRCP
Trigger: TGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACTCAGTGTGGGAGGCTaGCACGGCCATGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKLSVGG*HGHAVH
Trigger: GTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTTGCACAAAATACTGTaGGAGGGCCACACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASLHKIL*EGHTQG
Trigger: CCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAA...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGTGTCACCATCTTGTCTaGGTCGAGATCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERCHHLV*VEIPSL
Trigger: CAGGCTGGGGATCTCGACTCAGACAAGATGGTGACA...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGATTATGGCTCCTCGCTaGGCTGGTCAGTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERIMAPR*AGQFLA
Trigger: TGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAAT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCSVIDS*RLIFFI
Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRSVIDS*RLIFFI
Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSVIDS*RLIFFI
Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTATCTTCAAGTCCTCGTaGACAATCTCTGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPIFKSS*TISGAE
Trigger: CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGAT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCATCTTCAAGTCCTCGTaGACAATCTCTGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIIFKSS*TISGAE
Trigger: CTCTGCACCAGAGATTGTGCACGAGGACTTGAAGAT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCCATCTCATAGAAGATaGAGCCCACACCCCACATGT +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWPSHRR*SPHPTC
Trigger: ACATGTGGGGTGTGGGCTGCATCTTCTATGAGATGG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTTTCGACCCTCAAACTaGAACAGCTTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWFRPSN*NSLVRR
Trigger: CCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAATGGTGCAGAGCTGAGTaGGCCCCGTGCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKWCRAE*APCRTK
Trigger: CTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCA...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCAGTGGAGATCTTGCGTaGGGGATGGTTGCGCATACG +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVSGDLA*GMVAHT
Trigger: CGTATGCGCAACCATCCCCCACGCAAGATCTCCACT...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCAGGGACTTCTCCGTGTaGATAATGTCATGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGRDFSV*IMSCSV
Trigger: TACGCTACATGACATTATCCACACGGAGAAGTCCCT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVRPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERRPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGAGTGGAGTAGTCCGTaGACCCAAGCAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAEWSSP*TQAGCQ
Trigger: CTGACATCCTGCTTGGGTCCACGGACTACTCCACTC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAAGAGGGGACGGCCTGTaGCCATCTCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARGDGL*PSHRRC
Trigger: GCATCTTCTATGAGATGGCCACAGGCCGTCCCCTCT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAGAATGGATGTTTCATaGCATCCTCTGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIRMDVS*HPLRRS
Trigger: GGATCTCCGCAGAGGATGCCATGAAACATCCATTCT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAVSGSL*IRSPRL
Trigger: CAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGGGTTGACAGGCCAATaGTGGGGTGTTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKGLTGQ*WGVWAG
Trigger: GCCTGCCCAAACACCCCACCATTGGCCTGTCAACCC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGTTGCACAAAATACTGTaGGAGGGCCACACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERLHKIL*EGHTQG
Trigger: CCCCTGCGTGTGGCCCTCCCACAGTATTTTGTGCAA...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGCACATATGCACATTATaGCTCCTCGCTGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWHICTL*LLAELV
Trigger: GACCAGCTCAGCGAGGAGCCATAATGTGCATATGTG...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGTTCATACAGCGATTATaGTGCATTCAGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: GRATRRGWGPASLYTEILFIQRL*CIQEPN
Trigger: GTTGGGTTCCTGAATGCACCATAATCGCTGTATGAA...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSTSECH*QLPFDL
Trigger: AAGATCAAACGGCAGCTGTCAATGACACTCCGAGGT...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCAAAGATGGGGCTATTaGGGGTCAGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVQRWGY*GSASPG
Trigger: ACCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACAAAGATGGGGCTATTaGGGGTCAGCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAQRWGY*GSASPG
Trigger: ACCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACGAGGAGAGGCAGCCTaGAGAGTTATTGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARGEAA*RVIGLY
Trigger: GTAAAGGCCAATAACTCTTCAGGCTGCCTCTCCTCG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR GCA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TILSESRSPAWASSGPLASVIDS*RLIFFI
Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTTTCGACCCTCAAACTaGAACAGCTTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVFRPSN*NSLVRR
Trigger: CCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAA...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAATGGCGATCTCGGACTaGATGTACCAAAGGACCCGT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAMAISD*MYQRTR
Trigger: ACGGGTCCTTTGGTACATGCAGTCCGAGATCGCCAT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR CCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCCCCAGAATTGAAGGATaGGTGACATGGTCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVPRIEG*VTWSRA
Trigger: TGCTCGAGACCATGTCACCCATCCTTCAATTCTGGG...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGTTCTCAGATTTAGGTaGCTGATTGAGGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSVLRFR*LIEGKG
Trigger: GCCCTTGCCCTCAATCAGCCACCTAAATCTGAGAAC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTCTTCATCCGATCCATaGCGATCTGAGTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGISSSDP*RSEFSD
Trigger: ATCTGAGAACTCAGATCGCCATGGATCGGATGAAGA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACATACGCACTCTCACTaGAGACTGCACCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAHTHSH*RLHLIR
Trigger: TCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGTTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERLLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVLLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATTGTTGGGATTGACTTaGCTCGGGCCAGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGALLGLT*LGPGQS
Trigger: ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCAGAATGGATGTTTCATaGCATCCTCTGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPRMDVS*HPLRRS
Trigger: GGATCTCCGCAGAGGATGCCATGAAACATCCATTCT...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGTTCATACAGCGATTATaGTGCATTCAGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWFIQRL*CIQEPN
Trigger: GTTGGGTTCCTGAATGCACCATAATCGCTGTATGAA...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGCGTGTGCCCAGAATTaGAGGATGGGTGACATGGTC +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKACAQN*RMGDMV
Trigger: GACCATGTCACCCATCCTTCAATTCTGGGCACACGC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR TCA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCCACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TQGIVTILSESRSPAWASPQGCL*ACFCLC
Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTGG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGNSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWNSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTTTCATGGCATCCTCTaGGGAGATCCGATTTCGACC +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVFHGIL*GDPIST
Trigger: GGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATTTCATGGCATCCTCTaGGGAGATCCGATTTCGACC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAFHGIL*GDPIST
Trigger: GGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAAAAGCAGGCAGAGGATaGCTCAGACTCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAKAGRG*LRLKAL
Trigger: CAATGCCTTGAGTCTGAGGCATCCTCTGCCTGCTTT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGGAGCAGGGCTTCATTaGACAAAATACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERGAGLH*TKYCGR
Trigger: CCTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGGAGCAGGGCTTCATTaGACAAAATACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAGAGLH*TKYCGR
Trigger: CCTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCCTGCTTGTGCACATATaGACATTATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVLLVHI*TLWLLA
Trigger: AGCGAGGAGCCATAATGTGCATATGTGCACAAGCAG...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTCTTCATCCGATCCATaGCGATCTGAGTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWSSSDP*RSEFSD
Trigger: ATCTGAGAACTCAGATCGCCATGGATCGGATGAAGA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAAGGCCACGGAGCAGCTaGAACAGGAACAGTTTCACG +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKRPRSS*NRNSFT
Trigger: CGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCT...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCACATATGCACATTATaGCTCCTCGCTGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERHICTL*LLAELV
Trigger: GACCAGCTCAGCGAGGAGCCATAATGTGCATATGTG...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTTCATACAGCGATTATaGTGCATTCAGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIFIQRL*CIQEPN
Trigger: GTTGGGTTCCTGAATGCACCATAATCGCTGTATGAA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTTGGTACATCCCCATaGTGGCAAACGGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERLGTSP*WQTGLL
Trigger: CAAAAGTCCCGTTTGCCACCATGGGGATGTACCAAG...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVLTAAV*SSSSDP
Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVPQGCL*ACFCLC
Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTGG...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACCACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAPQGCL*ACFCLC
Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTGG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAATCCGCTCCCCCAGACTaGGGAAGAATGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKSAPPD*GRMDVS
Trigger: TGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGA...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IVTILSESRSPAWASSGPASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAGCAGAAGGCTCCATTaGAGATCTTCTCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERSRRLH*RSSQVQ
Trigger: CTGTACCTGAGAAGATCTGCAATGGAGCCTTCTGCT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWSVIDS*RLIFFI
Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKQSSRY*FRSLSR
Trigger: CCTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR GCA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGINSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPNSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR GCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGATACAGCGATTATGGTaGATTCAGGAACCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERIQRLW*IQEPNP
Trigger: GGGGTTGGGTTCCTGAATGCACCATAATCGCTGTAT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAAGAATGGATGTTTCATaGCATCCTCTGCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARMDVS*HPLRRS
Trigger: GGATCTCCGCAGAGGATGCCATGAAACATCCATTCT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR TCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWNSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAAGGGACTTCTCCGTGTaGATAATGTCATGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGARDFSV*IMSCSV
Trigger: TACGCTACATGACATTATCCACACGGAGAAGTCCCT...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACCACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TRRGWGPASLYTEILHLKPQGCL*ACFCLC
Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTGG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR TCA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAASFCS*ISFSAN
Trigger: ATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR GCA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCAACAGTTTCACGTTGTaGATGTTGATGATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVNSFTL*MLMMFP
Trigger: TGGGAACATCATCAACATGCACAACGTGAAACTGTT...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CCA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGTTCATACAGCGATTATaGTGCATTCAGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERFIQRL*CIQEPN
Trigger: GTTGGGTTCCTGAATGCACCATAATCGCTGTATGAA...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS GCA 90 bp GAGGCGGAGGCGGCGTCCCGCTCAGCCGGCCATGAGCTTGGCCGCTaGGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTTGAATCCGAG +
Preference number: 5 (lower is better)
Translates to: EAEAASRSAGHELGR*GRCPRTRWRRLESE
Trigger: CTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGGGACGCCGCCTCCGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS GCA 90 bp GCGGCGTCCCGCTCAGCCGGCCATGAGCTTGGCCGCTGCGGGCGATaGCCCCGGACTCGTTGGCGCCGGCTTGAATCCGAGTGCTCACGG +
Preference number: 5 (lower is better)
Translates to: AASRSAGHELGRCGR*PRTRWRRLESECSR
Trigger: CCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGGGACGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 90 bp GAGTGCTCACGGCGGCTCGCGGCACAGAGCGGTCTGATCGCGGAGTaGCGGCGGATCCCAGGGCCGAACAGCCAACGGCCCAACCGCCGC +
Preference number: 5 (lower is better)
Translates to: ECSRRLAAQSGLIAE*RRIPGPNSQRPNRR
Trigger: GCGGCGGTTGGGCCGTTGGCTGTTCGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000622098.4
CDS CCA 90 bp GCCGGCCATGAGCTTGGCCGCTGCGGGCGATGCCCCCGGACTCGTTaGCGCCGGCTTGAATCCGAGTGCTCACGGCGGCTCGCGGCACAG +
Preference number: 5 (lower is better)
Translates to: AGHELGRCGRCPRTR*RRLESECSRRLAAQ
Trigger: CTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS TCA 90 bp GCTTGGCCGCTGCGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTTaGATCCGAGTGCTCACGGCGGCTCGCGGCACAGAGCGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: AWPLRAMPPDSLAPA*IRVLTAARGTERSD
Trigger: ATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS GCA 90 bp TGCGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTTGAATCCGAGTaGTCACGGCGGCTCGCGGCACAGAGCGGTCTGATCGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CGRCPRTRWRRLESE*SRRLAAQSGLIAEW
Trigger: CCACTCCGCGATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000622098.4
CDS TCA 90 bp GGCTTGAATCCGAGTGCTCACGGCGGCTCGCGGCACAGAGCGGTCTaGTCGCGGAGTGGCGGCGGATCCCAGGGCCGAACAGCCAACGGC +
Preference number: 5 (lower is better)
Translates to: GLNPSAHGGSRHRAV*SRSGGGSQGRTANG
Trigger: GCCGTTGGCTGTTCGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000622098.4
CDS CCA 90 bp GGGCTGCCCTGTGAGGGGTGTGGCATCCCTCCAGCCGCTGCCTGCTaGGGCCTCGGTCTGTGGCTTAGAACTCGGTGTCCACCACGCGGA +
Preference number: 5 (lower is better)
Translates to: GLPCEGCGIPPAAAC*GLGLWLRTRCPPRG
Trigger: TCCGCGTGGTGGACACCGAGTTCTAAGCCACAGACCGAGGCCCCAGCAGGCAGCGGCTGGAGGGATGCCACACCCCTCACAGGGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000518022.5
ENST00000520141.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGTCTTCAGCCATGGTaGCTGGGCCCGGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSLQPW*LGPGRR
Trigger: GCGGCGGCCCGGGCCCAGCAACCATGGCTGAAGACT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CAA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCGTTGGCGCCGGCTaGAATCCGAGTGCTCACGGC +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWLVGAG*NPSAHG
Trigger: GCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS-3UTR CAA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGTCTTCAGCCATGGTaGCTGGGCCCGGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWSLQPW*LGPGRR
Trigger: GCGGCGGCCCGGGCCCAGCAACCATGGCTGAAGACT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS GCA 90 bp ACTGCAGGAGCAGAAGGCTCCATTGCAGATCTTCTCAGGTACAGCTaGAGTGATGGGCCCAGCCATGGGTCGGCCAGGGCGTGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: TAGAEGSIADLLRYS*SDGPSHGSARACAQ
Trigger: CTGGGCACACGCCCTGGCCGACCCATGGCTGGGCCCATCACTGCAGCTGTACCTGAGAAGATCTGCAATGGAGCCTTCTGCTCCTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000428400.5
ENST00000518022.5
CDS CCA 90 bp GCCTCGGTCTGTGGCTTAGAACTCGGTGTCCACCACGCGGAAAGCTaGCCTGCCTGTGGGGGAAAGCAGAGCAGATGGCTGTTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: ASVCGLELGVHHAES*PACGGKQSRWLLVG
Trigger: ACCCACCAACAGCCATCTGCTCTGCTTTCCCCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAGCCACAGACCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 90 bp GCCTCGGTCTGTGGCTTAGAACTCGGTGTCCACCACGCGGAAAGCTaGCCTGCCTGTGGGGGAAAGCAGAGCAGATGGCTGAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASVCGLELGVHHAES*PACGGKQSRWLSQA
Trigger: TGCCTGACTCAGCCATCTGCTCTGCTTTCCCCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAGCCACAGACCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520141.5
CDS-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCGAPLV*SMPRPP
Trigger: AGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRGAPLV*SMPRPP
Trigger: AGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCC...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRGAPLV*SMPRPP
Trigger: AGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGATCCTCAGTGGAGATCTaGCGTGGGGGATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSSVEI*RGGWLR
Trigger: GCGCAACCATCCCCCACGCAAGATCTCCACTGAGGA...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTCCTCAGTGGAGATCTaGCGTGGGGGATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCSSVEI*RGGWLR
Trigger: GCGCAACCATCCCCCACGCAAGATCTCCACTGAGGA...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGGCGGGGGCGCGCGAG +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRSAGARE
Trigger: CTCGCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS TCA 90 bp TGCTCTCTGTGGCGAGGCCGAGCAAGAATAAAGGGCGTGGCTGACTaGAGAGGCGTGATTTCGCTCTCTACCCGACTCCGCACGCCTCCG +
Preference number: 5 (lower is better)
Translates to: CSLWRGRARIKGVAD*RGVISLSTRLRTPP
Trigger: CGGAGGCGTGCGGAGTCGGGTAGAGAGCGAAATCACGCCTCTTCAGTCAGCCACGCCCTTTATTCTTGCTCGGCCTCGCCACAGAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS GCA 90 bp GGTCTGTGGCTTAGAACTCGGTGTCCACCACGCGGAAAGCTGGCCTaGCTGTGGGGGAAAGCAGAGCAGATGGCTGAGTCAGGCATCGAC +
Preference number: 5 (lower is better)
Translates to: GLWLRTRCPPRGKLA*LWGKAEQMAESGID
Trigger: GTCGATGCCTGACTCAGCCATCTGCTCTGCTTTCCCCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAGCCACAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520141.5
CDS-3UTR CAA 90 bp TATGGCTCCTCGCTGAGCTGGTCAGTTCCTGGCAGGGCCCCTACCCAACAGCACTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACT +
Preference number: 5 (lower is better)
Translates to: YGSSLSWSVPGRAPTQQHLRGGW*RIRTLT
Trigger: AGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAA...GTGCTGTTGGGTAGGGGCCCTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGTCCTCAGTGGAGATCTaGCGTGGGGGATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWSSVEI*RGGWLR
Trigger: GCGCAACCATCCCCCACGCAAGATCTCCACTGAGGA...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTCCTCAGTGGAGATCTaGCGTGGGGGATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSSVEI*RGGWLR
Trigger: GCGCAACCATCCCCCACGCAAGATCTCCACTGAGGA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGCGTGTTTGAGGTCCTaGAGCAGGGACACTTCCCGG +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLAACLRS*SRDTSR
Trigger: CCGGGAAGTGTCCCTGCTCAAGGACCTCAAACACGC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACGTCTTGAACTCCTCGTaGGACAGGATGCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDVLNSS*DRMPGH
Trigger: GTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGAC...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGTCTTGAACTCCTCGTaGGACAGGATGCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRVLNSS*DRMPGH
Trigger: GTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGAC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGAGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTCGTTGGCGCCGGCTaGAATCCGAGTGCTCACGGC +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPLVGAG*NPSAHG
Trigger: GCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAG...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357227.9
ENST00000622098.4
CDS TCA 90 bp GCACAATCTCTGGTGCAGAGCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGGCGGGGGCGCGCGAG +
Preference number: 5 (lower is better)
Translates to: AQSLVQSGVSLTAAV*SSSSDPWRSAGARE
Trigger: CTCGCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGAGATTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS GCA 90 bp TTAGGTCACGGCTATATCCTGAGGACCTGGAATAGTGACTCGGACTaGATGTACCAAAGGACCCGTCCGCAGCGGGAGGGGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LGHGYILRTWNSDSD*MYQRTRPQREGTRP
Trigger: TGGCCGCGTCCCCTCCCGCTGCGGACGGGTCCTTTGGTACATGCAGTCCGAGTCACTATTCCAGGTCCTCAGGATATAGCCGTGACCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517479.1
ENST00000517997.5
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGTGCTCAGGGGCACCATaGGTCTTGTCTATGCCTCGG +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWCSGAP*VLSMPR
Trigger: CCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCA...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTGCTCAGGGGCACCATaGGTCTTGTCTATGCCTCGG +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLACSGAP*VLSMPR
Trigger: CCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACT +
Preference number: 5 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGLRGGW*RIRTLT
Trigger: AGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGCGTGTTTGAGGTCCTaGAGCAGGGACACTTCCCGG +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIACLRS*SRDTSR
Trigger: CCGGGAAGTGTCCCTGCTCAAGGACCTCAAACACGC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGCCACGTCTCCTCAGTaGGGGTTCCTAAGATACGGA +
Preference number: 5 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCATSPQ*GFLRYG
Trigger: TCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGTCTTGAACTCCTCGTaGGACAGGATGCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTVLNSS*DRMPGH
Trigger: GTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGAC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCGTCTTGAACTCCTCGTaGGACAGGATGCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGVLNSS*DRMPGH
Trigger: GTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGAC...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACGGGAGCAGGGCTTCATaGCACAAAATACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: ASVWEAGTAMLSTGNYQDGSRAS*HKILWE
Trigger: CTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCCC...GTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGGGAGCAGGGCTTCATaGCACAAAATACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: WPQCGRLARPCCPPATTKGSRAS*HKILWE
Trigger: CTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCCC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCCTACTCGGTCTCACTaGGTACATCCCCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLAPTRSH*VHPHGG
Trigger: GCCACCATGGGGATGTACCAAGTGAGACCGAGTAGG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS TCA 90 bp GATTTGCTCTCTGTGGCGAGGCCGAGCAAGAATAAAGGGCGTGGCTaGCTGAAGAGGCGTGATTTCGCTCTCTACCCGACTCCGCACGCC +
Preference number: 5 (lower is better)
Translates to: DLLSVARPSKNKGRG*LKRRDFALYPTPHA
Trigger: GGCGTGCGGAGTCGGGTAGAGAGCGAAATCACGCCTCTTCAGTCAGCCACGCCCTTTATTCTTGCTCGGCCTCGCCACAGAGAGCAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS TCA 90 bp CAAACGGGACTCATTCCCGTAGTGAACGTGTGCAGCCCCGCCCTTTaGGGTTGTCGCCCAGCCAATCTGATTTGCTCTCTGTGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: QTGLIPVVNVCSPAL*GCRPANLICSLWRG
Trigger: GCCTCGCCACAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGAATGAGTCCCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS GCA 90 bp AGATTTCTGTGTTTAGGTCACGGCTATATCCTGAGGACCTCGGACTaGATGTACCAAAGGACCCGTCCGCAGCGGGAGGGGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: RFLCLGHGYILRTSD*MYQRTRPQREGTRP
Trigger: TGGCCGCGTCCCCTCCCGCTGCGGACGGGTCCTTTGGTACATGCAGTCCGAGGTCCTCAGGATATAGCCGTGACCTAAACACAGAAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522883.1
CDS CCA 90 bp TATGGACCCCAGAGCCACTCAGGAGTTCTGGAAACCCAGCATGGATaGGGATCTTTGTCAGTACCTGCCCACCCACACAGCCAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: YGPQSHSGVLETQHG*GSLSVPAHPHSQPH
Trigger: GTGGGGCTGGCTGTGTGGGTGGGCAGGTACTGACAAAGATCCCCATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTGGGGTCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 90 bp CCACTATGGACCCCAGAGCCACTCAGGAGTTCTGGAAACCCAGCATaGATGGGGATCTTTGTCAGTACCTGCCCACCCACACAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLWTPEPLRSSGNPA*MGIFVSTCPPTQPA
Trigger: GGCTGGCTGTGTGGGTGGGCAGGTACTGACAAAGATCCCCATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTGGGGTCCATAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGGGCCCTAACGATGGATaGTTGGGATCTAGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: WPQCGRLARPCCPPATTKGPNDG*LGSRGK
Trigger: TTTTCCCCTAGATCCCAACAATCCATCGTTAGGGCC...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTGCTCAGGGGCACCATaGGTCTTGTCTATGCCTCGG +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPCSGAP*VLSMPR
Trigger: CCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGGGTAGTGATAGGCGCTaGTTGATGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILGSDRR*LMSSVE
Trigger: CTCCACTGAGGACATCAACAAGCGCCTATCACTACC...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGGGTAGTGATAGGCGCTaGTTGATGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRGSDRR*LMSSVE
Trigger: CTCCACTGAGGACATCAACAAGCGCCTATCACTACC...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTCAAAGATGGGGCTATaGAGGGTCAGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDSKMGL*RVSFSR
Trigger: CCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTGA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACATTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLAFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGGCCACGTCTCCTCAGTaGGGGTTCCTAAGATACGGA +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWATSPQ*GFLRYG
Trigger: TCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGC...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLAVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGGGCATTGTCACCATCTaGTCTGAGTCGAGATCCCCA +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILGIVTI*SESRSP
Trigger: TGGGGATCTCGACTCAGACAAGATGGTGACAATGCC...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCGGCATTGTCACCATCTaGTCTGAGTCGAGATCCCCA +
Preference number: 5 (lower is better)
Translates to: GGPHAGGGAQPVCIQRYCGIVTI*SESRSP
Trigger: TGGGGATCTCGACTCAGACAAGATGGTGACAATGCC...GCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGGGAGCAGGGCTTCATaGCACAAAATACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRGSRAS*HKILWE
Trigger: CTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCCC...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS GCA 90 bp TTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATCGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVLSMPRPPRSVIDS*RLIFFIRSMAIGGG
Trigger: GCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS GCA 90 bp TCCTCGTGCACAATCTCTGGTGCAGAGCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATCGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSCTISGAERSVIDS*RLIFFIRSMAIGGG
Trigger: GCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGAGATTGTGCACGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGCCTAACGATGGATTGTaGGGATCTAGGGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRPNDGL*GSRGKA
Trigger: GGCTTTTCCCCTAGATCCCAACAATCCATCGTTAGG...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACT +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPLRGGW*RIRTLT
Trigger: AGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAA...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGTGATAGGCGCTTGTaGATGTCCTCAGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRSDRRL*MSSVEI
Trigger: GATCTCCACTGAGGACATCAACAAGCGCCTATCACT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGGTAGTGATAGGCGCTaGTTGATGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTGSDRR*LMSSVE
Trigger: CTCCACTGAGGACATCAACAAGCGCCTATCACTACC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGTTGAGTGCCACAAGGTaGTCTGTGAGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: WPQCGRLARPCCPPATTKLSATR*SVSLLL
Trigger: CAAAAGCAAGCTCACAGACAACCTTGTGGCACTCAA...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACTCCAGTCTGATCTCCTaGAGTGCCACAAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDSSLIS*SATRLS
Trigger: AGACAACCTTGTGGCACTCAAGGAGATCAGACTGGA...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGTACTGCTTCAGGTCCTaGTCCAGGTACTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: WPQCGRLARPCCPPATTKYCFRS*SRYSKT
Trigger: TGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTA...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTGCCACGTCTCCTCAGTaGGGGTTCCTAAGATACGGA +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPATSPQ*GFLRYG
Trigger: TCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGC...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGACTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TVGGPHAGGGAQPVCIQRLRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...TCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACAGGGAGCAGGGCTTCATaGCACAAAATACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTGSRAS*HKILWE
Trigger: CTCCCACAGTATTTTGTGCAATGAAGCCCTGCTCCC...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCTCCCCCAACCCTGCTaGTGCACATATGCACATTAT +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILLPQPC*CTYAHY
Trigger: ATAATGTGCATATGTGCACAAGCAGGGTTGGGGGAG...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS TCA 90 bp GGCTCAAAAGGGCCTCGGCTCGGTACTTGGGGTAGTTGTATGTCTTaGACTCCTCGTTGGACAGGATGCCTGGCCACGTCTCCTCAGTTG +
Preference number: 5 (lower is better)
Translates to: GSKGPRLGTWGSCMS*TPRWTGCLATSPQL
Trigger: CAACTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGACATACAACTACCCCAAGTACCGAGCCGAGGCCCTTTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000523543.1
ENST00000523699.5
ENST00000622098.4
CDS CCA 90 bp GATAGGCGCTTGTTGATGTCCTCAGTGGAGATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTCACTGGAGACTGCACCTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: DRRLLMSSVEILRGG*LRIRTLTGDCTSSE
Trigger: CTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGACATCAACAAGCGCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 90 bp GCTGGCCGGTCCATTCCCCAGCTCCACTCACTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTGAGGAAGAATGGATGTTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: AGRSIPQLHSLSGSL*IRSPRLRKNGCFMA
Trigger: TGCCATGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAGTGAGTGGAGCTGGGGAATGGACCGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493213.1
CDS CCA 90 bp ACCTGGCGCGTCAATCACCACTCGTTCCCCCTACTCGGTCTCACTTaGTACATCCCCATGGTGGCAAACGGGACTCATTCCCGTAGTGAA +
Preference number: 5 (lower is better)
Translates to: TWRVNHHSFPLLGLT*YIPMVANGTHSRSE
Trigger: TTCACTACGGGAATGAGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACGAGTGGTGATTGACGCGCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCCTAACGATGGATTGTaGGGATCTAGGGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLAPNDGL*GSRGKA
Trigger: GGCTTTTCCCCTAGATCCCAACAATCCATCGTTAGG...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCC +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILIDSCR*IFFIRS
Trigger: GGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCC +
Preference number: 5 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDIDSCR*IFFIRS
Trigger: GGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATCCTCAGTGGAGATCTaGCGTGGGGGATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: MIRVPNRGCVPVSERLGASSVEI*RGGWLR
Trigger: GCGCAACCATCCCCCACGCAAGATCTCCACTGAGGA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGAGTGATAGGCGCTTGTaGATGTCCTCAGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWSDRRL*MSSVEI
Trigger: GATCTCCACTGAGGACATCAACAAGCGCCTATCACT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTCAAAGATGGGGCTATaGAGGGTCAGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPSKMGL*RVSFSR
Trigger: CCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTGA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGTTGAGTGCCACAAGGTaGTCTGTGAGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GRATRRGWGPASLYTEILLSATR*SVSLLL
Trigger: CAAAAGCAAGCTCACAGACAACCTTGTGGCACTCAA...CAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GCAGAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCTCCAGTCTGATCTCCTaGAGTGCCACAAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: AESKQGRCSWGLPCEGCGSSLIS*SATRLS
Trigger: AGACAACCTTGTGGCACTCAAGGAGATCAGACTGGA...GCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGCGTGTTTGAGGTCCTaGAGCAGGGACACTTCCCGG +
Preference number: 5 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVACLRS*SRDTSR
Trigger: CCGGGAAGTGTCCCTGCTCAAGGACCTCAAACACGC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTTGTAGCGTAACGATGTaGGCGTGTTTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TILSESRSPAWASSGPLACSVTM*ACLRSL
Trigger: CAAGGACCTCAAACACGCCAACATCGTTACGCTACA...AGCCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp AGGCCAATGGGTGGGTTGACAGGCCAATGGTGGGGTGTTTGGGCAGGCAGCAGGTACTGCTTCAGGTCCTaGTCCAGGTACTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: RPMGGLTGQWWGVWAGSRYCFRS*SRYSKT
Trigger: TGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTA...CCTGCTGCCTGCCCAAACACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGCCACGTCTCCTCAGTaGGGGTTCCTAAGATACGGA +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPATSPQ*GFLRYG
Trigger: TCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGAGGCCAATGGGTGGGTaGACAGGCCAATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERRPMGG*TGQWWG
Trigger: ACCCCACCATTGGCCTGTCAACCCACCCATTGGCCT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGGCATTGTCACCATCTaGTCTGAGTCGAGATCCCCA +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIGIVTI*SESRSP
Trigger: TGGGGATCTCGACTCAGACAAGATGGTGACAATGCC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCCCCCAACCCTGCTaGTGCACATATGCACATTAT +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWLPQPC*CTYAHY
Trigger: ATAATGTGCATATGTGCACAAGCAGGGTTGGGGGAG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGACACTCCCCCAACCCTGCTaGTGCACATATGCACATTAT +
Preference number: 5 (lower is better)
Translates to: GGWHGHAVHRQLPRQRQTLPQPC*CTYAHY
Trigger: ATAATGTGCATATGTGCACAAGCAGGGTTGGGGGAG...TGTCTGTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS TCA 90 bp GGCACCATTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCGG +
Preference number: 5 (lower is better)
Translates to: GTIGLVYASATSECH*QLPFDLLHPIHGDR
Trigger: CCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS TCA 90 bp CTTGGCTCGGGCCAGGCCTGGAAATCAGAGAAAGGACAGCTAGAATaGGGGAGTCATGGGCAAAGTCTCGGGGAGAGTGCAGTTGAGACT +
Preference number: 5 (lower is better)
Translates to: LGSGQAWKSEKGQLE*GSHGQSLGESAVET
Trigger: AGTCTCAACTGCACTCTCCCCGAGACTTTGCCCATGACTCCCTCATTCTAGCTGTCCTTTCTCTGATTTCCAGGCCTGGCCCGAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000523543.1
CDS TCA 90 bp GGCACCATTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCGC +
Preference number: 5 (lower is better)
Translates to: GTIGLVYASATSECH*QLPFDLLHPIHGDR
Trigger: GCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS CCA 90 bp GCAGGGGGCACTGACATGAACTTGTCAGTGCTCACTCAACCACTATaGACCCCAGAGCCACTCAGGAGTTCTGGAAACCCAGCATGGATG +
Preference number: 5 (lower is better)
Translates to: AGGTDMNLSVLTQPL*TPEPLRSSGNPAWM
Trigger: CATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTGGGGTCCATAGTGGTTGAGTGAGCACTGACAAGTTCATGTCAGTGCCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCGAGCAGAAGGCTCCATaGCAGATCTTCTCAGGTACA +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGIEQKAP*QIFSGT
Trigger: TGTACCTGAGAAGATCTGCAATGGAGCCTTCTGCTC...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS-3UTR CAA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCATGCTCAGGGGCACCATaGGTCTTGTCTATGCCTCGG +
Preference number: 5 (lower is better)
Translates to: MIRVPNRGCVPVSERLGACSGAP*VLSMPR
Trigger: CCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCA...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACT +
Preference number: 5 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVLRGGW*RIRTLT
Trigger: AGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCAGTGATAGGCGCTTGTaGATGTCCTCAGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGISDRRL*MSSVEI
Trigger: GATCTCCACTGAGGACATCAACAAGCGCCTATCACT...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGTGATAGGCGCTTGTaGATGTCCTCAGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPSDRRL*MSSVEI
Trigger: GATCTCCACTGAGGACATCAACAAGCGCCTATCACT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCTCAAAGATGGGGCTATaGAGGGTCAGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPSKMGL*RVSFSR
Trigger: CCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTGA...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTCCAGTCTGATCTCCTaGAGTGCCACAAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGISSLIS*SATRLS
Trigger: AGACAACCTTGTGGCACTCAAGGAGATCAGACTGGA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTTGTAGCGTAACGATGTaGGCGTGTTTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPCSVTM*ACLRSL
Trigger: CAAGGACCTCAAACACGCCAACATCGTTACGCTACA...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: WPQCGRLARPCCPPATTKRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...CTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACACTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTTTGTTGGGATTGACTaGGCTCGGGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: TQGIVTILSESRSPAWASFVGID*ARARPK
Trigger: CTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAA...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGCCACGTCTCCTCAGTaGGGGTTCCTAAGATACGGA +
Preference number: 5 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSATSPQ*GFLRYG
Trigger: TCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWLRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS TCA 90 bp GGCACCATTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCTG +
Preference number: 5 (lower is better)
Translates to: GTIGLVYASATSECH*QLPFDLLHPIHGDL
Trigger: CAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000428400.5
ENST00000518022.5
CDS TCA 90 bp ACCCTGCTCCTACGTAGCCCACCTGAGTTCTCAGATTTAGGTGGCTaGTTGAGGGCAAGGGCCCTAACGATGGATTGTTGGGATCTAGGG +
Preference number: 5 (lower is better)
Translates to: TLLLRSPPEFSDLGG*LRARALTMDCWDLG
Trigger: CCCTAGATCCCAACAATCCATCGTTAGGGCCCTTGCCCTCAATCAGCCACCTAAATCTGAGAACTCAGGTGGGCTACGTAGGAGCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTGAGCAAGGGACAAGG +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRSEQGTR
Trigger: CCTTGTCCCTTGCTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 90 bp TTAGTACTCAGTTCCGATCTTGGCAGAAGTTTGCTAGCGCCTAGGTaGGCAGTGGCCAGTAACCTGGCGCGTCAATCACCACTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: LVLSSDLGRSLLAPR*AVASNLARQSPLVP
Trigger: GGGAACGAGTGGTGATTGACGCGCCAGGTTACTGGCCACTGCTCACCTAGGCGCTAGCAAACTTCTGCCAAGATCGGAACTGAGTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457458.6
ENST00000517479.1
ENST00000517997.5
ENST00000520295.5
ENST00000522883.1
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTCGGACTGCATGTACC +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRSRTACT
Trigger: GGTACATGCAGTCCGAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS TCA 90 bp GGCACCATTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCTC +
Preference number: 5 (lower is better)
Translates to: GTIGLVYASATSECH*QLPFDLLHPIHGDL
Trigger: GAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS GCA 90 bp TTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATCTCGGACTGC +
Preference number: 5 (lower is better)
Translates to: LVLSMPRPPRSVIDS*RLIFFIRSMAISDC
Trigger: GCAGTCCGAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCC +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPIDSCR*IFFIRS
Trigger: GGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAAGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: TRRGWGPASLYTEILHLKGAPLV*SMPRPP
Trigger: AGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCC...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
CDS-3UTR CAA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGAGTGATAGGCGCTTGTaGATGTCCTCAGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWSDRRL*MSSVEI
Trigger: GATCTCCACTGAGGACATCAACAAGCGCCTATCACT...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTTCAAAGATGGGGCTATaGAGGGTCAGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSSKMGL*RVSFSR
Trigger: CCTGGAGAAGCTGACCCTCAATAGCCCCATCTTTGA...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCTTGAGTGCCACAAGGTaGTCTGTGAGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGILSATR*SVSLLL
Trigger: CAAAAGCAAGCTCACAGACAACCTTGTGGCACTCAA...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCTCCAGTCTGATCTCCTaGAGTGCCACAAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPSSLIS*SATRLS
Trigger: AGACAACCTTGTGGCACTCAAGGAGATCAGACTGGA...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTGTAGCGTAACGATGTaGGCGTGTTTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWCSVTM*ACLRSL
Trigger: CAAGGACCTCAAACACGCCAACATCGTTACGCTACA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCTGTAGCGTAACGATGTaGGCGTGTTTGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IVTILSESRSPAWASSGPCSVTM*ACLRSL
Trigger: CAAGGACCTCAAACACGCCAACATCGTTACGCTACA...GGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATACTGTGGGAGGGCCACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: ILWEGHTQGVGPSQSVYRRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...TCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGTGGCCCTCCCACAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp GTGTGGGAGGCTGGCACGGCCATGCTGTCCACCGGCAACTACCAAGACAGAGACAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: VWEAGTAMLSTGNYQDRDRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...GTCTCTGTCTTGGTAGTTGCCGGTGGACAGCATGGCCGTGCCAGCCTCCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERVVSGS*WIRSPR
Trigger: TCTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS-3UTR CAA 90 bp GAGAGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: ESKQGRCSWGLPCEGCGILRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...GATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPLRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS TCA 90 bp GTCGCTATCAAGTCTGCCACAAGGACAAAGAGACCTGATTTAAAATaGGTTTGGACACTCTGGCCCCTAACGCCCACCCACCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: VAIKSATRTKRPDLK*VWTLWPLTPTHPPA
Trigger: GGCTGGTGGGTGGGTGGGCGTTAGGGGCCAGAGTGTCCAAACTCATTTTAAATCAGGTCTCTTTGTCCTTGTGGCAGACTTGATAGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 90 bp TCCTTCGCTATAGGCCGAATATTCCGCAAGGTGATTGGTCATAATTaGGCTCAATCGAGTCTCGTCCCGCCTTTAGCCCGCCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: SFAIGRIFRKVIGHN*AQSSLVPPLARPPS
Trigger: AGATGGAGGGCGGGCTAAAGGCGGGACGAGACTCGATTGAGCGCAATTATGACCAATCACCTTGCGGAATATTCGGCCTATAGCGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517997.5
CDS GCA 90 bp TTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATCGCCACAACT +
Preference number: 5 (lower is better)
Translates to: LVLSMPRPPRSVIDS*RLIFFIRSMAIATT
Trigger: AGTTGTGGCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS-3UTR CAA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAATTGCGTGGGGGATGGTaGCGCATACGCACTCTCACT +
Preference number: 5 (lower is better)
Translates to: TRRGWGPASLYTEILHLKLRGGW*RIRTLT
Trigger: AGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAA...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCAGGTAGTGATAGGCGCTaGTTGATGTCCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: MIRVPNRGCVPVSERLGAGSDRR*LMSSVE
Trigger: CTCCACTGAGGACATCAACAAGCGCCTATCACTACC...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp CACCTTGTCCATTTCCCAGAGTCTCTGGTAGTCCCCAGATCCCCCTGCAACTGGTACTGCTTCAGGTCCTaGTCCAGGTACTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: HLVHFPESLVVPRSPCNWYCFRS*SRYSKT
Trigger: TGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTA...CCAGTTGCAGGGGGATCTGGGGACTACCAGAGACTCTGGGAAATGGACAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp TCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTCTGGACCCCTGGAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: SPSCLSRDPQPGLALDPWRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...CCAGGGGTCCAGAGCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCGGCATTGTCACCATCTaGTCTGAGTCGAGATCCCCA +
Preference number: 5 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVGIVTI*SESRSP
Trigger: TGGGGATCTCGACTCAGACAAGATGGTGACAATGCC...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS TCA 90 bp AGTGCAGTTGAGACTGAGGGTGTCCTAGGCAAAATCTGGCAAGGCTaGAGGGAAGTGAGACTAAGTGGTCATGGGAAAGTAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SAVETEGVLGKIWQG*REVRLSGHGKVGGW
Trigger: CCAGCCTCCTACTTTCCCATGACCACTTAGTCTCACTTCCCTTCAGCCTTGCCAGATTTTGCCTAGGACACCCTCAGTCTCAACTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000522234.5
CDS TCA 90 bp GGCACCATTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATTTA +
Preference number: 5 (lower is better)
Translates to: GTIGLVYASATSECH*QLPFDLLHPIHGDL
Trigger: TAAATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGCCACAACTAGAAGAT +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRSPQLED
Trigger: ATCTTCTAGTTGTGGCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS CCA 90 bp GGAAAGCTGGCCTGCCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAAATATGGAAG +
Preference number: 5 (lower is better)
Translates to: GKLACLSQASTKTEG*PPFVAESPLVQIWK
Trigger: CTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462483.1
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS CCA 90 bp GCTGTCCACCGGCAACTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAAATATGGAAG +
Preference number: 5 (lower is better)
Translates to: AVHRQLSQASTKTEG*PPFVAESPLVQIWK
Trigger: CTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGTTGCCGGTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462827.2
CDS CCA 90 bp CAGGGTAGATTTCTGTGTTTAGGTCACGGCTATATCCTGAGGACCTaGAATAGTGACTCGGACTGCATGTACCAAAGGACCCGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: QGRFLCLGHGYILRT*NSDSDCMYQRTRPQ
Trigger: CTGCGGACGGGTCCTTTGGTACATGCAGTCCGAGTCACTATTCCAGGTCCTCAGGATATAGCCGTGACCTAAACACAGAAATCTACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517479.1
ENST00000517997.5
CDS-3UTR CAA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGGAGCAGAAGGCTCCATaGCAGATCTTCTCAGGTACA +
Preference number: 5 (lower is better)
Translates to: GLVMIRVPNRGCVPVSEREQKAP*QIFSGT
Trigger: TGTACCTGAGAAGATCTGCAATGGAGCCTTCTGCTC...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276052.10
CDS-3UTR CAA 90 bp CAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTTGAGTGCCACAAGGTaGTCTGTGAGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: QSQGLVMIRVPNRGCVPVLSATR*SVSLLL
Trigger: CAAAAGCAAGCTCACAGACAACCTTGTGGCACTCAA...GACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCTACTGCTTCAGGTCCTaGTCCAGGTACTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: TQGIVTILSESRSPAWASYCFRS*SRYSKT
Trigger: TGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTA...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp AGTAAGCAGGGAAGATGTAGTTGGGGGCTGCCCTGTGAGGGGTGTGGCATCCCTAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: SKQGRCSWGLPCEGCGIPRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...AGGGATGCCACACCCCTCACAGGGCAGCCCCCAACTACATCTTCCCTGCTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp ACTCAAGGCATTGTCACCATCTTGTCTGAGTCGAGATCCCCAGCCTGGGCTAGCCTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TQGIVTILSESRSPAWASLRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...GCTAGCCCAGGCTGGGGATCTCGACTCAGACAAGATGGTGACAATGCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000523344.5
ENST00000622098.4
CDS-3UTR CAA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTCAGCCTGAAGAGTTATaGGCCTTTACCACCTTAGCT +
Preference number: 5 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSQPEEL*AFTTLA
Trigger: AGCTAAGGTGGTAAAGGCCAATAACTCTTCAGGCTG...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457458.6
CDS-3UTR CAA 90 bp GGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCC +
Preference number: 5 (lower is better)
Translates to: GLVMIRVPNRGCVPVSERIDSCR*IFFIRS
Trigger: GGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT...CCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp CATAGCCAATCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCTACTGCTTCAGGTCCTaGTCCAGGTACTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: HSQSQGLVMIRVPNRGCVYCFRS*SRYSKT
Trigger: TGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTA...GACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGATTGGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTGAAAGGCTGGGAGCACTCAGACTCAAGGCATaGTCACCATCTTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: MIRVPNRGCVPVSERLGALRLKA*SPSCLS
Trigger: ACTCAGACAAGATGGTGACAATGCCTTGAGTCTGAG...TGCTCCCAGCCTTTCAGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462827.2
ENST00000622098.4
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTGAGTTCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRSEFSDL
Trigger: TAAATCTGAGAACTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS TCA 90 bp GAGTCAGGCATCGACGAAGACCGAAGGCTGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAATATGGAAGTAGCTACAGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: ESGIDEDRRLASFCS*ISFSANMEVATDGG
Trigger: TCCCCCATCTGTAGCTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462483.1
CDS CCA 90 bp AGGGGCTATACCTACCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAAATATGGAAG +
Preference number: 5 (lower is better)
Translates to: RGYTYLSQASTKTEG*PPFVAESPLVQIWK
Trigger: CTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGTAGGTATAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 90 bp AAGCAGAGCAGATGGCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAAATATGGAAG +
Preference number: 5 (lower is better)
Translates to: KQSRWLSQASTKTEG*PPFVAESPLVQIWK
Trigger: CTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGCCATCTGCTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520141.5
CDS-3UTR CAA 90 bp TCCCAGGGTCTGGTGATGATCAGGGTTCCAAATAGGGGCTGTGTCCCTGTCTCTAGGAACAGTTTCACGTaGTGCATGTTGATGATGTTC +
Preference number: 5 (lower is better)
Translates to: SQGLVMIRVPNRGCVPVSRNSFT*CMLMMF
Trigger: GAACATCATCAACATGCACAACGTGAAACTGTTCCT...AGAGACAGGGACACAGCCCCTATTTGGAACCCTGATCATCACCAGACCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS-3UTR CAA 90 bp ACACGCAGGGGGTGGGGCCCAGCCAGTCTGTATACAGAGATATTGCATTTAAAACTCCCCCAACCCTGCTaGTGCACATATGCACATTAT +
Preference number: 5 (lower is better)
Translates to: TRRGWGPASLYTEILHLKLPQPC*CTYAHY
Trigger: ATAATGTGCATATGTGCACAAGCAGGGTTGGGGGAG...TTTTAAATGCAATATCTCTGTATACAGACTGGCTGGGCCCCACCCCCTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000622098.4
CDS GCA 90 bp TTGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATTTATTGGTTT +
Preference number: 5 (lower is better)
Translates to: LVLSMPRPPRSVIDS*RLIFFIRSMAIYWF
Trigger: AAACCAATAAATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS TCA 90 bp GAGTCAGGCATCGACGAAGACCGAAGGCTGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAATATGGAAGTAGTGTCAGGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: ESGIDEDRRLASFCS*ISFSANMEVVSGSL
Trigger: CAAACTTCCTGACACTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000462827.2
ENST00000518022.5
ENST00000520141.5
ENST00000523344.5
ENST00000622098.4
CDS TCA 90 bp TGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATTTATTGGTTTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: CLCLGHLGVSLTAAV*SSSSDPWRFIGFFS
Trigger: ACTAAAGAAACCAATAAATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS TCA 90 bp ATTGACAGCTGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCTaGGCAAGGGACAAGGATGGAAATGGGTCTCTTATTAGCATTTGC +
Preference number: 5 (lower is better)
Translates to: IDSCRLIFFIRSMAI*ARDKDGNGSLISIC
Trigger: GCAAATGCTAATAAGAGACCCATTTCCATCCTTGTCCCTTGCTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 90 bp GACACAAAGAAATCATTATTAACTTTGTCAAGTGAATTATGGTATTaGAATTACCACCTGTTAAGTCTAGGTGATGGGTGGTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: DTKKSLLTLSSELWY*NYHLLSLGDGWCLG
Trigger: CCCCAAACACCACCCATCACCTAGACTTAACAGGTGGTAATTGCAATACCATAATTCACTTGACAAAGTTAATAATGATTTCTTTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462483.1
CDS CAA 90 bp CGGTGGCTGAGGCGGAGGCGGCGTCCCGCTCAGCCGGCCATGAGCTaGGCCGCTGCGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTTG +
Preference number: 6 (lower is better)
Translates to: RWLRRRRRPAQPAMS*AAAGDAPGLVGAGL
Trigger: CAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGGGACGCCGCCTCCGCCTCAGCCACCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS GCA 72 bp GCGGCGTCCCGCTCAGCCGGCCATGAGCTTGGCCGCTaGGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTT +
Preference number: 6 (lower is better)
Translates to: AASRSAGHELGR*GRCPRTRWRRL
Trigger: AAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGGGACGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 72 bp AGGCGGAGGCGGCGTCCCGCTCAGCCGGCCATGAGCTaGGCCGCTGCGGGCGATGCCCCCGGACTCGTTGGC +
Preference number: 6 (lower is better)
Translates to: RRRRRPAQPAMS*AAAGDAPGLVG
Trigger: GCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCGGGACGCCGCCTCCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 72 bp CGGCGGCTCGCGGCACAGAGCGGTCTGATCGCGGAGTaGCGGCGGATCCCAGGGCCGAACAGCCAACGGCCC +
Preference number: 6 (lower is better)
Translates to: RRLAAQSGLIAE*RRIPGPNSQRP
Trigger: GGGCCGTTGGCTGTTCGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCGCGAGCCGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000622098.4
CDS CCA 72 bp TTCGCCGCAGGCGCCCGTCCCAGTAGTCTTCAGCCATaGTTGCTGGGCCCGGGCCGCCGCCGGCTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: FAAGARPSSLQP*LLGPGRRRLRR
Trigger: CCTCCTCAGCCGGCGGCGGCCCGGGCCCAGCAACCATGGCTGAAGACTACTGGGACGGGCGCCTGCGGCGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS TCA 72 bp CCGAGTGCTCACGGCGGCTCGCGGCACAGAGCGGTCTaGTCGCGGAGTGGCGGCGGATCCCAGGGCCGAACA +
Preference number: 6 (lower is better)
Translates to: PSAHGGSRHRAV*SRSGGGSQGRT
Trigger: TGTTCGGCCCTGGGATCCGCCGCCACTCCGCGATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000622098.4
CDS TCA 72 bp CTGCGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTTaGATCCGAGTGCTCACGGCGGCTCGCGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: LRAMPPDSLAPA*IRVLTAARGTE
Trigger: CTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS GCA 72 bp CGCTCAGCCGGCCATGAGCTTGGCCGCTGCGGGCGATaGCCCCGGACTCGTTGGCGCCGGCTTGAATCCGAG +
Preference number: 6 (lower is better)
Translates to: RSAGHELGRCGR*PRTRWRRLESE
Trigger: CTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTCATGGCCGGCTGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 72 bp GAGCTTGGCCGCTGCGGGCGATGCCCCCGGACTCGTTaGCGCCGGCTTGAATCCGAGTGCTCACGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: ELGRCGRCPRTR*RRLESECSRRL
Trigger: GAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 72 bp GCTGCGGGCGATGCCCCCGGACTCGTTGGCGCCGGCTaGAATCCGAGTGCTCACGGCGGCTCGCGGCACAGA +
Preference number: 6 (lower is better)
Translates to: AAGDAPGLVGAG*NPSAHGGSRHR
Trigger: TCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCATCGCCCGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS GCA 72 bp TGCCCCCGGACTCGTTGGCGCCGGCTTGAATCCGAGTaGTCACGGCGGCTCGCGGCACAGAGCGGTCTGATC +
Preference number: 6 (lower is better)
Translates to: CPRTRWRRLESE*SRRLAAQSGLI
Trigger: GATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAAGCCGGCGCCAACGAGTCCGGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 72 bp AGGTGGCACAGCCAGAATCCTACACAACCCGCCAGCTaGCCCCAGCAGTCCTGTTTCCCAGTCCCCACGCTG +
Preference number: 6 (lower is better)
Translates to: RWHSQNPTQPAS*PQQSCFPVPTL
Trigger: CAGCGTGGGGACTGGGAAACAGGACTGCTGGGGCCAGCTGGCGGGTTGTGTAGGATTCTGGCTGTGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493213.1
CDS TCA 72 bp CCCAGCCATGGGTCGGCCAGGGCGTGTGCCCAGAATTaGAGGATGGGTGACATGGTCTCGAGCACGGCCATA +
Preference number: 6 (lower is better)
Translates to: PSHGSARACAQN*RMGDMVSSTAI
Trigger: TATGGCCGTGCTCGAGACCATGTCACCCATCCTTCAATTCTGGGCACACGCCCTGGCCGACCCATGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000428400.5
ENST00000518022.5
CDS GCA 72 bp GCAGAAGGCTCCATTGCAGATCTTCTCAGGTACAGCTaGAGTGATGGGCCCAGCCATGGGTCGGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: AEGSIADLLRYS*SDGPSHGSARA
Trigger: CGCCCTGGCCGACCCATGGCTGGGCCCATCACTGCAGCTGTACCTGAGAAGATCTGCAATGGAGCCTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276052.10
ENST00000428400.5
ENST00000518022.5
CDS GCA 72 bp GTGCACAATCTCTGGTGCAGAGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGGAGCAGCACGTGTGGG +
Preference number: 6 (lower is better)
Translates to: VHNLWCRAEWAP*RTKFPRSSTCG
Trigger: CCCACACGTGCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000523034.1
CDS GCA 72 bp TCGTGCACAATCTGGTGCAGAGCTGAGTGGGCCCCGTaGAGAACGAAGTTCCCCAGGAGCAGCACGTGTGGG +
Preference number: 6 (lower is better)
Translates to: SCTIWCRAEWAP*RTKFPRSSTCG
Trigger: CCCACACGTGCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCAGATTGTGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520295.5
CDS CAA 90 bp GCAGGCACTGCTCCCCTCCCAAACACAGACACTAGGCCCAGAGCCTaGTCACACAAAAGAGGACAGGGTCCCAGTGCCCTCCAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: AGTAPLPNTDTRPRA*SHKRGQGPSALQGL
Trigger: GAGCCCTTGGAGGGCACTGGGACCCTGTCCTCTTTTGTGTGACAAGGCTCTGGGCCTAGTGTCTGTGTTTGGGAGGGGAGCAGTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428400.5
ENST00000522234.5
ENST00000523699.5
CDS CAA 90 bp GGGACTCATTCCCGTAGTGAACGTGTGCAGCCCCGCCCTTTGAGGTaGTCGCCCAGCCAATCTGATTTGCTCTCTGTGGCGAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: GTHSRSERVQPRPLR*SPSQSDLLSVARPS
Trigger: GCTCGGCCTCGCCACAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGAATGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS TCA 72 bp GTGGGGCAGGGAGGAAGACAAGGGGCTATACCTACCTaGGTCAGGCATCGACGAAGACCGAAGGCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: VGQGGRQGAIPT*VRHRRRPKAGL
Trigger: GAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGTAGGTATAGCCCCTTGTCTTCCTCCCTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 72 bp GGGGGATGGTTGCGCATACGCACTCTCACTGGAGACTaGACCTCATCCGAGGACGTGGCTGAAGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GGWLRIRTLTGD*TSSEDVAEAWS
Trigger: TGACCAGGCTTCAGCCACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 90 bp TTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGGCGGGGGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: LSMPRPPRSVIDSCR*IFFIRSMAIGGGAR
Trigger: TCGCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS CAA 90 bp CAGAGCCACTCAGGAGTTCTGGAAACCCAGCATGGATGGGGATCTTaGTCAGTACCTGCCCACCCACACAGCCAGCCCCACTGGGACCCT +
Preference number: 6 (lower is better)
Translates to: QSHSGVLETQHGWGS*SVPAHPHSQPHWDP
Trigger: AGGGTCCCAGTGGGGCTGGCTGTGTGGGTGGGCAGGTACTGACAAAGATCCCCATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRSAG
Trigger: CCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS TCA 72 bp TGGCGAGGCCGAGCAAGAATAAAGGGCGTGGCTGACTaGAGAGGCGTGATTTCGCTCTCTACCCGACTCCGC +
Preference number: 6 (lower is better)
Translates to: WRGRARIKGVAD*RGVISLSTRLR
Trigger: GCGGAGTCGGGTAGAGAGCGAAATCACGCCTCTTCAGTCAGCCACGCCCTTTATTCTTGCTCGGCCTCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS GCA 72 bp GGCCTATCTGCTCAGGGGCACCATTGGTCTTGTCTATaGCTCGGCCACCTCGGAGTGTCATTGACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GLSAQGHHWSCL*LGHLGVSLTAA
Trigger: GGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS GCA 72 bp CTTAGAACTCGGTGTCCACCACGCGGAAAGCTGGCCTaGCTGTGGGGGAAAGCAGAGCAGATGGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: LRTRCPPRGKLA*LWGKAEQMAVG
Trigger: ACCAACAGCCATCTGCTCTGCTTTCCCCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 72 bp GGCTATATCCTGAGGACCTGGAATAGTGACTCGGACTaGATGTACCAAAGGACCCGTCCGCAGCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: GYILRTWNSDSD*MYQRTRPQREG
Trigger: CCCCTCCCGCTGCGGACGGGTCCTTTGGTACATGCAGTCCGAGTCACTATTCCAGGTCCTCAGGATATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517479.1
ENST00000517997.5
CDS GCA 72 bp CTTAGAACTCGGTGTCCACCACGCGGAAAGCTGGCCTaGCTGTGGGGGAAAGCAGAGCAGATGGCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: LRTRCPPRGKLA*LWGKAEQMAES
Trigger: TGACTCAGCCATCTGCTCTGCTTTCCCCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520141.5
CDS GCA 72 bp TGTTTAGGTCACGGCTATATCCTGAGGACCTCGGACTaGATGTACCAAAGGACCCGTCCGCAGCGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: CLGHGYILRTSD*MYQRTRPQREG
Trigger: CCCCTCCCGCTGCGGACGGGTCCTTTGGTACATGCAGTCCGAGGTCCTCAGGATATAGCCGTGACCTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522883.1
CDS CCA 72 bp GTCAATCACCACTCGTTCCCCCTACTCGGTCTCACTTaGTACATCCCCATGGTGGCAAACGGGACGTCGGCG +
Preference number: 6 (lower is better)
Translates to: VNHHSFPLLGLT*YIPMVANGTSA
Trigger: CGCCGACGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACGAGTGGTGATTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517997.5
CDS CCA 72 bp TTCAAGTCCTCGTGCACAATCTGGTGCAGAGCTGAGTaGGCCCCGTGCAGAACGAAGTTCCCCAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: FKSSCTIWCRAE*APCRTKFPRSS
Trigger: GCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCAGATTGTGCACGAGGACTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520295.5
CDS CAA 72 bp CCACTCTCATCCAGGCCTATCTGCTCAGGGGCACCATaGGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTC +
Preference number: 6 (lower is better)
Translates to: PLSSRPICSGAP*VLSMPRPPRSV
Trigger: GACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS CAA 72 bp CCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGGCGGG +
Preference number: 6 (lower is better)
Translates to: PRPPRSVIDSCR*IFFIRSMAIGG
Trigger: CCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357227.9
ENST00000517426.5
ENST00000522234.5
CDS CAA 72 bp CGTCAATCACCACTCGTTCCCCCTACTCGGTCTCACTaGGTACATCCCCATGGTGGCAAACGGGACGTCGGC +
Preference number: 6 (lower is better)
Translates to: RQSPLVPPTRSH*VHPHGGKRDVG
Trigger: GCCGACGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACGAGTGGTGATTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517997.5
CDS CAA 72 bp TCCCGTAGTGAACGTGTGCAGCCCCGCCCTTTGAGGTaGTCGCCCAGCCAATCTGATTTGCTCTCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: SRSERVQPRPLR*SPSQSDLLSVA
Trigger: CGCCACAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 90 bp CCACCACTCTCATCCAGGCCTATCTGCTCAGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: PPLSSRPICSGAPLV*SMPRPPRSVIDSCR
Trigger: ACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS CAA 90 bp GCAAACGGGACTCATTCCCGTAGTGAACGTGTGCAGCCCCGCCCTTaGAGGTTGTCGCCCAGCCAATCTGATTTGCTCTCTGTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: ANGTHSRSERVQPRP*RLSPSQSDLLSVAR
Trigger: CCTCGCCACAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGAATGAGTCCCGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 90 bp TGCACAATCTCTGGTGCAGAGCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGGCGGGGGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: CTISGAERSVIDSCR*IFFIRSMAIGGGAR
Trigger: TCGCGCGCCCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGAGATTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS CAA 90 bp AGGCGCTTGTTGATGTCCTCAGTGGAGATCTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACTGGAGACTGCACCTCATCCGAGGAC +
Preference number: 6 (lower is better)
Translates to: RRLLMSSVEILRGGW*RIRTLTGDCTSSED
Trigger: GTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGACATCAACAAGCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 90 bp GGGTTCCCTAAAGCCCACAGCCTAGCAGGGGGCACTGACATGAACTaGTCAGTGCTCACTCAACCACTATGGACCCCAGAGCCACTCAGG +
Preference number: 6 (lower is better)
Translates to: GFPKAHSLAGGTDMN*SVLTQPLWTPEPLR
Trigger: CCTGAGTGGCTCTGGGGTCCATAGTGGTTGAGTGAGCACTGACAAGTTCATGTCAGTGCCCCCTGCTAGGCTGTGGGCTTTAGGGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 72 bp CTGGTGCAGAGCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LVQSGVSLTAAV*SSSSDPWRSAG
Trigger: CCCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS CCA 72 bp CACTCTCATCCAGGCCTATCTGCTCAGGGGCACCATTaGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCA +
Preference number: 6 (lower is better)
Translates to: HSHPGLSAQGHH*SCLCLGHLGVS
Trigger: TGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS CAA 72 bp CCCCGCCCTTTGAGGTTGTCGCCCAGCCAATCTGATTaGCTCTCTGTGGCGAGGCCGAGCAAGAATAAAGGG +
Preference number: 6 (lower is better)
Translates to: PRPLRLSPSQSD*LSVARPSKNKG
Trigger: CCCTTTATTCTTGCTCGGCCTCGCCACAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 90 bp CACGCTGGCCGGTCCATTCCCCAGCTCCACTCACTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGACTGAGGAAGAATGGATGTTTCATG +
Preference number: 6 (lower is better)
Translates to: HAGRSIPQLHSLSGS*WIRSPRLRKNGCFM
Trigger: CATGAAACATCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAGTGAGTGGAGCTGGGGAATGGACCGGCCAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493213.1
CDS TCA 72 bp TCTGTGGCGAGGCCGAGCAAGAATAAAGGGCGTGGCTaGCTGAAGAGGCGTGATTTCGCTCTCTACCCGACT +
Preference number: 6 (lower is better)
Translates to: SVARPSKNKGRG*LKRRDFALYPT
Trigger: AGTCGGGTAGAGAGCGAAATCACGCCTCTTCAGTCAGCCACGCCCTTTATTCTTGCTCGGCCTCGCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS TCA 72 bp CTCATTCCCGTAGTGAACGTGTGCAGCCCCGCCCTTTaGGGTTGTCGCCCAGCCAATCTGATTTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LIPVVNVCSPAL*GCRPANLICSL
Trigger: CAGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CCA 72 bp CAGAGCCACTCAGGAGTTCTGGAAACCCAGCATGGATaGGGATCTTTGTCAGTACCTGCCCACCCACACAGC +
Preference number: 6 (lower is better)
Translates to: QSHSGVLETQHG*GSLSVPAHPHS
Trigger: GCTGTGTGGGTGGGCAGGTACTGACAAAGATCCCCATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 72 bp ACCCCAGAGCCACTCAGGAGTTCTGGAAACCCAGCATaGATGGGGATCTTTGTCAGTACCTGCCCACCCACA +
Preference number: 6 (lower is better)
Translates to: TPEPLRSSGNPA*MGIFVSTCPPT
Trigger: TGTGGGTGGGCAGGTACTGACAAAGATCCCCATCCATGCTGGGTTTCCAGAACTCCTGAGTGGCTCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 72 bp TCCCCCTACTCGGTCTCACTTGGTACATCCCCATGGTaGCAAACGGGACTCATTCCCGTAGTGAACGTGTGC +
Preference number: 6 (lower is better)
Translates to: SPYSVSLGTSPW*QTGLIPVVNVC
Trigger: GCACACGTTCACTACGGGAATGAGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CCA 72 bp CGTTCCCCCTACTCGGTCTCACTTGGTACATCCCCATaGTGGCAAACGGGACTCATTCCCGTAGTGAACGTG +
Preference number: 6 (lower is better)
Translates to: RSPYSVSLGTSP*WQTGLIPVVNV
Trigger: CACGTTCACTACGGGAATGAGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 72 bp TCATCCAGGCCTATCTGCTCAGGGGCACCATTGGTCTaGTCTATGCCTCGGCCACCTCGGAGTGTCATTGAC +
Preference number: 6 (lower is better)
Translates to: SSRPICSGAPLV*SMPRPPRSVID
Trigger: GTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACCAATGGTGCCCCTGAGCAGATAGGCCTGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS CAA 72 bp TCATGTAGCGTAACGATGTTGGCGTGTTTGAGGTCCTaGAGCAGGGACACTTCCCGGATGGCGGTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: SCSVTMLACLRS*SRDTSRMAVQG
Trigger: ACCCTGCACCGCCATCCGGGAAGTGTCCCTGCTCAAGGACCTCAAACACGCCAACATCGTTACGCTACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 72 bp CCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCTCGGAC +
Preference number: 6 (lower is better)
Translates to: PRPPRSVIDSCR*IFFIRSMAISD
Trigger: GTCCGAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS CAA 72 bp CGGTCCATTCCCCAGCTCCACTCACTGTCAGGAAGTTaGTGGATCCGCTCCCCCAGACTGAGGAAGAATGGA +
Preference number: 6 (lower is better)
Translates to: RSIPQLHSLSGS*WIRSPRLRKNG
Trigger: TCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAGTGAGTGGAGCTGGGGAATGGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493213.1
CDS CAA 72 bp CCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGCCACA +
Preference number: 6 (lower is better)
Translates to: PRPPRSVIDSCR*IFFIRSMAIAT
Trigger: TGTGGCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS CAA 72 bp TCTGGTGCAGAGCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGGCGGG +
Preference number: 6 (lower is better)
Translates to: SGAERSVIDSCR*IFFIRSMAIGG
Trigger: CCCGCCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS TCA 72 bp GGCCAGGCCTGGAAATCAGAGAAAGGACAGCTAGAATaGGGGAGTCATGGGCAAAGTCTCGGGGAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: GQAWKSEKGQLE*GSHGQSLGESA
Trigger: TGCACTCTCCCCGAGACTTTGCCCATGACTCCCTCATTCTAGCTGTCCTTTCTCTGATTTCCAGGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000523543.1
CDS TCA 72 bp AGTTCCGATCTTGGCAGAAGTTTGCTAGCGCCTAGGTaGGCAGTGGCCAGTAACCTGGCGCGTCAATCACCA +
Preference number: 6 (lower is better)
Translates to: SSDLGRSLLAPR*AVASNLARQSP
Trigger: TGGTGATTGACGCGCCAGGTTACTGGCCACTGCTCACCTAGGCGCTAGCAAACTTCTGCCAAGATCGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457458.6
ENST00000517479.1
ENST00000517997.5
ENST00000520295.5
ENST00000522883.1
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTCGGACT +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRSRT
Trigger: AGTCCGAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCGCCACAA +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRSPQ
Trigger: TTGTGGCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS GCA 72 bp AGTGATAGGCGCTTGTTGATGTCTCTCACTGGAGACTaGACCTCATCCGAGGACGTGGCTGAAGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SDRRLLMSLTGD*TSSEDVAEAWS
Trigger: TGACCAGGCTTCAGCCACGTCCTCGGATGAGGTGCAGTCTCCAGTGAGAGACATCAACAAGCGCCTATCACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523034.1
CDS CCA 72 bp TTGTTGATGTCCTCAGTGGAGATCTTGCGTGGGGGATaGTTGCGCATACGCACTCTCACTGGAGACTGCACC +
Preference number: 6 (lower is better)
Translates to: LLMSSVEILRGG*LRIRTLTGDCT
Trigger: GGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGACATCAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CCA 72 bp GTCAATCACCACTCGTTCCCCCTACTCGGTCTCACTTaGTACATCCCCATGGTGGCAAACGGGACTCATTCC +
Preference number: 6 (lower is better)
Translates to: VNHHSFPLLGLT*YIPMVANGTHS
Trigger: GGAATGAGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACGAGTGGTGATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 72 bp TTGATGTCCTCAGTGGAGATCTTGCGTGGGGGATGGTaGCGCATACGCACTCTCACTGGAGACTGCACCTCA +
Preference number: 6 (lower is better)
Translates to: LMSSVEILRGGW*RIRTLTGDCTS
Trigger: TGAGGTGCAGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGACATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520893.5
ENST00000522234.5
ENST00000622098.4
CDS CAA 72 bp AAAGCCCACAGCCTAGCAGGGGGCACTGACATGAACTaGTCAGTGCTCACTCAACCACTATGGACCCCAGAG +
Preference number: 6 (lower is better)
Translates to: KAHSLAGGTDMN*SVLTQPLWTPE
Trigger: CTCTGGGGTCCATAGTGGTTGAGTGAGCACTGACAAGTTCATGTCAGTGCCCCCTGCTAGGCTGTGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CAA 72 bp ACTCATTCCCGTAGTGAACGTGTGCAGCCCCGCCCTTaGAGGTTGTCGCCCAGCCAATCTGATTTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: THSRSERVQPRP*RLSPSQSDLLS
Trigger: AGAGAGCAAATCAGATTGGCTGGGCGACAACCTCAAAGGGCGGGGCTGCACACGTTCACTACGGGAATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS CAA 72 bp CGTCAATCACCACTCGTTCCCCCTACTCGGTCTCACTaGGTACATCCCCATGGTGGCAAACGGGACTCATTC +
Preference number: 6 (lower is better)
Translates to: RQSPLVPPTRSH*VHPHGGKRDSF
Trigger: GAATGAGTCCCGTTTGCCACCATGGGGATGTACCAAGTGAGACCGAGTAGGGGGAACGAGTGGTGATTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517479.1
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRSEF
Trigger: GAACTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRSEQ
Trigger: TTGCTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 72 bp TCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATC +
Preference number: 6 (lower is better)
Translates to: SMPRPPRSVIDS*RLIFFIRSMAI
Trigger: GATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS CCA 72 bp GCCTGCCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAA +
Preference number: 6 (lower is better)
Translates to: ACLSQASTKTEG*PPFVAESPLVQ
Trigger: TTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000457458.6
ENST00000462483.1
ENST00000518022.5
ENST00000523344.5
ENST00000622098.4
CDS CCA 72 bp GAAGTGAGACTAAGTGGTCATGGGAAAGTAGGAGGCTaGGGAGCCAATAAGAAAGGGGAGGCCAGTGGTACC +
Preference number: 6 (lower is better)
Translates to: EVRLSGHGKVGG*GANKKGEASGT
Trigger: GGTACCACTGGCCTCCCCTTTCTTATTGGCTCCCCAGCCTCCTACTTTCCCATGACCACTTAGTCTCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000522234.5
CDS CCA 72 bp TCCATTCCCCAGCTCCACTCACTGTCAGGAAGTTTGTaGATCCGCTCCCCCAGACTGAGGAAGAATGGATGT +
Preference number: 6 (lower is better)
Translates to: SIPQLHSLSGSL*IRSPRLRKNGC
Trigger: ACATCCATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACAGTGAGTGGAGCTGGGGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493213.1
CDS CAA 90 bp TTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCTCGGACTGCATGTAC +
Preference number: 6 (lower is better)
Translates to: LSMPRPPRSVIDSCR*IFFIRSMAISDCMY
Trigger: GTACATGCAGTCCGAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457458.6
ENST00000520295.5
CDS TCA 72 bp GGTCTTGTCTATGCCTCGGCCACCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCAT +
Preference number: 6 (lower is better)
Translates to: GLVYASATSECH*QLPFDLLHPIH
Trigger: ATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000517426.5
ENST00000518022.5
ENST00000518391.5
ENST00000519758.5
ENST00000520295.5
ENST00000520893.5
ENST00000522234.5
ENST00000522883.1
CDS TCA 72 bp CTACGTAGCCCACCTGAGTTCTCAGATTTAGGTGGCTaGTTGAGGGCAAGGGCCCTAACGATGGATTGTTGG +
Preference number: 6 (lower is better)
Translates to: LRSPPEFSDLGG*LRARALTMDCW
Trigger: CCAACAATCCATCGTTAGGGCCCTTGCCCTCAATCAGCCACCTAAATCTGAGAACTCAGGTGGGCTACGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 72 bp TCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATT +
Preference number: 6 (lower is better)
Translates to: SMPRPPRSVIDS*RLIFFIRSMAI
Trigger: AATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS GCA 72 bp ATAGGCCGAATATTCCGCAAGGTGATTGGTCATAATTaGGCTCAATCGAGTCTCGTCCCGCCTTTAGCCCGC +
Preference number: 6 (lower is better)
Translates to: IGRIFRKVIGHN*AQSSLVPPLAR
Trigger: GCGGGCTAAAGGCGGGACGAGACTCGATTGAGCGCAATTATGACCAATCACCTTGCGGAATATTCGGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517997.5
CDS CCA 72 bp CGGCAACTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAA +
Preference number: 6 (lower is better)
Translates to: RQLSQASTKTEG*PPFVAESPLVQ
Trigger: TTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGTTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462827.2
CDS CAA 72 bp CCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATTTATTGG +
Preference number: 6 (lower is better)
Translates to: PRPPRSVIDSCR*IFFIRSMAIYW
Trigger: CCAATAAATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS CAA 90 bp TTGTCTATGCCTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCCATGGCGATCGCCACAACTAGAAGA +
Preference number: 6 (lower is better)
Translates to: LSMPRPPRSVIDSCR*IFFIRSMAIATTRR
Trigger: TCTTCTAGTTGTGGCGATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518391.5
ENST00000520893.5
ENST00000522883.1
CDS TCA 72 bp GATCCATGGCGATCTGAGTTCTCAGATTTAGGTGGCTaGTTGAGGGCAAGGGCCCTAACGATGGATTGTTGG +
Preference number: 6 (lower is better)
Translates to: DPWRSEFSDLGG*LRARALTMDCW
Trigger: CCAACAATCCATCGTTAGGGCCCTTGCCCTCAATCAGCCACCTAAATCTGAGAACTCAGATCGCCATGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276052.10
ENST00000518022.5
CDS TCA 72 bp CTCGGCCACCTCGGAGTGTCATTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCATGGCGATTTATTGGT +
Preference number: 6 (lower is better)
Translates to: LGHLGVSLTAAV*SSSSDPWRFIG
Trigger: ACCAATAAATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519758.5
CDS TCA 72 bp CTCGTGCACAATCTCTGGTGCAGAGCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCAT +
Preference number: 6 (lower is better)
Translates to: LVHNLWCRAECH*QLPFDLLHPIH
Trigger: ATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGAGATTGTGCACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS GCA 72 bp ACAATCTCTGGTGCAGAGCGGAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATCCGATCCATGGCGATC +
Preference number: 6 (lower is better)
Translates to: TISGAERSVIDS*RLIFFIRSMAI
Trigger: GATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGCTCTGCACCAGAGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622098.4
CDS CCA 72 bp ACTGACATGAACTTGTCAGTGCTCACTCAACCACTATaGACCCCAGAGCCACTCAGGAGTTCTGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: TDMNLSVLTQPL*TPEPLRSSGNP
Trigger: TGGGTTTCCAGAACTCCTGAGTGGCTCTGGGGTCCATAGTGGTTGAGTGAGCACTGACAAGTTCATGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 72 bp ACCTACCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAA +
Preference number: 6 (lower is better)
Translates to: TYLSQASTKTEG*PPFVAESPLVQ
Trigger: TTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS CCA 72 bp AGATGGCTGAGTCAGGCATCGACGAAGACCGAAGGCTaGCCTCCTTTTGTAGCTGAATCTCCTTTAGTGCAA +
Preference number: 6 (lower is better)
Translates to: RWLSQASTKTEG*PPFVAESPLVQ
Trigger: TTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520141.5
CDS TCA 72 bp GAGACTGAGGGTGTCCTAGGCAAAATCTGGCAAGGCTaGAGGGAAGTGAGACTAAGTGGTCATGGGAAAGTA +
Preference number: 6 (lower is better)
Translates to: ETEGVLGKIWQG*REVRLSGHGKV
Trigger: TACTTTCCCATGACCACTTAGTCTCACTTCCCTTCAGCCTTGCCAGATTTTGCCTAGGACACCCTCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000522234.5
CDS TCA 72 bp AAGTCTGCCACAAGGACAAAGAGACCTGATTTAAAATaGGTTTGGACACTCTGGCCCCTAACGCCCACCCAC +
Preference number: 6 (lower is better)
Translates to: KSATRTKRPDLK*VWTLWPLTPTH
Trigger: GTGGGTGGGCGTTAGGGGCCAGAGTGTCCAAACTCATTTTAAATCAGGTCTCTTTGTCCTTGTGGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS GCA 72 bp AGGGACAAGGATGGAAATGGGTCTCTTATTAGCATTTaGTTGATCACCATGGGTTCCCTAAAGCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: RDKDGNGSLISI*LITMGSLKPTA
Trigger: GGCTGTGGGCTTTAGGGAACCCATGGTGATCAAGCAAATGCTAATAAGAGACCCATTTCCATCCTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 72 bp TGCCGTTTGATCTTCTTCATCCGATCCATGGCGATCTaGGCAAGGGACAAGGATGGAAATGGGTCTCTTATT +
Preference number: 6 (lower is better)
Translates to: CRLIFFIRSMAI*ARDKDGNGSLI
Trigger: AATAAGAGACCCATTTCCATCCTTGTCCCTTGCTCAGATCGCCATGGATCGGATGAAGAAGATCAAACGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428400.5
CDS TCA 72 bp CGTCGCTATCAAGTCTGCCACAAGGACAAAGAGACCTaGTTTAAAATGAGTTTGGACACTCTGGCCCCTAAC +
Preference number: 6 (lower is better)
Translates to: RRYQVCHKDKET*FKMSLDTLAPN
Trigger: GTTAGGGGCCAGAGTGTCCAAACTCATTTTAAATCAGGTCTCTTTGTCCTTGTGGCAGACTTGATAGCGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428400.5
ENST00000493213.1
CDS TCA 72 bp ATCGACGAAGACCGAAGGCTGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAATATGGAAGTAGTGTCA +
Preference number: 6 (lower is better)
Translates to: IDEDRRLASFCS*ISFSANMEVVS
Trigger: TGACACTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276052.10
ENST00000357227.9
ENST00000428400.5
ENST00000457458.6
ENST00000462827.2
ENST00000518022.5
ENST00000520141.5
ENST00000523344.5
ENST00000622098.4
CDS TCA 72 bp ATCGACGAAGACCGAAGGCTGGCCTCCTTTTGTAGCTaGATCTCCTTTAGTGCAAATATGGAAGTAGCTACA +
Preference number: 6 (lower is better)
Translates to: IDEDRRLASFCS*ISFSANMEVAT
Trigger: TGTAGCTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462483.1
CDS CAA 72 bp GAAGAATTAGAAAAAGCTGCCCCTTCTCTGAGAGGCTaGACCTTTATCTGTCAAACAATTCCATACACAAAC +
Preference number: 6 (lower is better)
Translates to: EELEKAAPSLRG*TFICQTIPYTN
Trigger: GTTTGTGTATGGAATTGTTTGACAGATAAAGGTCAAGCCTCTCAGAGAAGGGGCAGCTTTTTCTAATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462483.1
CDS TCA 72 bp CAATTCCATACACAAACCAGCTACAACCAGGGAAGATaGAATATAGACTATTACATGACACAAAGAAATCAT +
Preference number: 6 (lower is better)
Translates to: QFHTQTSYNQGR*NIDYYMTQRNH
Trigger: ATGATTTCTTTGTGTCATGTAATAGTCTATATTTCATCTTCCCTGGTTGTAGCTGGTTTGTGTATGGAATTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462483.1