RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK15 (Homo sapiens)

Ensembl gene IDs: ENSG00000138395

Ensembl transcript IDs: ENST00000260967.6, ENST00000410091.7, ENST00000434439.1, ENST00000450471.6, ENST00000451080.5, ENST00000460149.5, ENST00000466337.1, ENST00000488419.1, ENST00000493754.5, ENST00000652192.3

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGAGGCAGAGGAATCCCACTACTGTTGTGGGAACTCTTTGTATTaGTGGACAGGTAAAACTGCTCAAGAACTCTTGCTGATGCGTCAA +
Preference number: 1 (lower is better)
Translates to: REAEESHYCCGNSLY*WTGKTAQELLLMRQ
Trigger: TTGACGCATCAGCAAGAGTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGTGGGATTCCTCTGCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 90 bp AGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTaGCTGTGGACTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGA +
Preference number: 1 (lower is better)
Translates to: RTCWEGNRLIKRIPI*LWTARLSFPTHRKR
Trigger: TCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAGTCCACAGCCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR TCA 90 bp ACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACTCTTGCTaGTGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGC +
Preference number: 1 (lower is better)
Translates to: TLCIDGQVKLLKNSC*CVNSSIPELSIGTS
Trigger: GCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAGAGTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 90 bp TGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTaGAGAACCAGGTCTGAGGTTTGCATCTTCACTCTGGCATGCTAC +
Preference number: 1 (lower is better)
Translates to: CKSCVFSKFDRCQEH*RTRSEVCIFTLACY
Trigger: GTAGCATGCCAGAGTGAAGATGCAAACCTCAGACCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 90 bp GGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTaGAAAGGGGAGCCATCATACCATTTGTTGATATGCATAAGACAT +
Preference number: 1 (lower is better)
Translates to: GVSLSCIWNRIFQIG*KGEPSYHLLICIRH
Trigger: ATGTCTTATGCATATCAACAAATGGTATGATGGCTCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR CCA 90 bp TATACTTTACCAATTATTCTCAAATCAACTCAAATCCAAACCATTTaGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGACA +
Preference number: 1 (lower is better)
Translates to: YTLPIILKSTQIQTI*GTSLGEKYPLALGT
Trigger: TGTCCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGATTTGAGTTGATTTGAGAATAATTGGTAAAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR GCA 90 bp TACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATaGCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGC +
Preference number: 1 (lower is better)
Translates to: YTVSSFRYSWTVFVK*LTKIRYLLRQVDLG
Trigger: GCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 90 bp CCTTTCTCTGGGTTAAATAAACACCATGATTTGAGTACATATATCTaGTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCT +
Preference number: 1 (lower is better)
Translates to: PFSGLNKHHDLSTYI*SITQPTLFHLSGIA
Trigger: AGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAACCCAGAGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 90 bp AGGTGTCTTTTGAATCATGATCCAATACTAAATAGCAGCTGCCTCTaGAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACAT +
Preference number: 1 (lower is better)
Translates to: RCLLNHDPILNSSCL*KSCVFSKFDRCQEH
Trigger: ATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTATTTAGTATTGGATCATGATTCAAAAGACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 90 bp ATAATTCCAAGTATAATCTGTACACAGCTGTTCCAAAGTCATTATTaGAGAATCTTGGAATTAGACGGGACATTGGAGGTCAGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: IIPSIICTQLFQSHY*RILELDGTLEVSSS
Trigger: AGAAGAGCTGACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAGCTGTGTACAGATTATACTTGGAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR TCA 90 bp ATCAACCTTCTAGCCCAGGAATCTCTTAACAAATGCCAAAATGAATaGAGTTATTCAGAAGCCCTCTTCTTAGACTTAGTTTATGTCCAG +
Preference number: 1 (lower is better)
Translates to: INLLAQESLNKCQNE*SYSEALFLDLVYVQ
Trigger: CTGGACATAAACTAAGTCTAAGAAGAGGGCTTCTGAATAACTTCATTCATTTTGGCATTTGTTAAGAGATTCCTGGGCTAGAAGGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp GTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTCCTGTTCCAGACAACATAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VTRAKRASEVSSSCSRQHSPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...ATGTTGTCTGGAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR TCA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCAACCTTCCACTCTGGTaGCTCCTCATTAGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFNLPLW*LLISFP
Trigger: CGGGAAGCTAATGAGGAGTCACCAGAGTGGAAGGTT...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR TCA 90 bp GTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTCCTGTTCCAGACAACATGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VTRAKRASEVSSSCSRQHGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...ATGTTGTCTGGAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CCA 90 bp CAGGTCCCTGTGAAGAACGTGTTGGTGGTGGATGTACGCCAGGCCCCGCAAAAGTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 2 (lower is better)
Translates to: QVPVKNVLVVDVRQAPQKSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...CTTTTGCGGGGCCTGGCGTACATCCACCACCAACACGTTCTTCACAGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CCA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCAAAAGGATTCCAATTTaGCTGTGGACTGCCAGACTC +
Preference number: 2 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFKRIPI*LWTARL
Trigger: GAGTCTGGCAGTCCACAGCCAAATTGGAATCCTTTT...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CCA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGGAGAGAGACACTATCTaGCAGAACATGCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLERDTI*QNMLGR
Trigger: CCTTCCCAGCATGTTCTGCCAGATAGTGTCTCTCTC...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCCGATTTGAGTTTCCCTaGCTGCTTTTAGAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVRFEFP*LLLEGV
Trigger: GACTCCTTCTAAAAGCAGCCAGGGAAACTCAAATCG...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCGGGAGAAATTGTAAGTaGACACAGGAGTGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: LFNISTIKPALRFPITVAGRNCK*TQEWQV
Trigger: GACCTGCCACTCCTGTGTTCACTTACAATTTCTCCC...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACTACATTTCCTGAGATaGTCCCTGGACAGAAGCGAT +
Preference number: 2 (lower is better)
Translates to: LADASTVASLSFRLVLALLHFLR*SLDRSD
Trigger: ATCGCTTCTGTCCAGGGATCATCTCAGGAAATGTAG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGACTATCTGGCAGAACATaGTGGGAAGGCAACCGGTTA +
Preference number: 2 (lower is better)
Translates to: GLVVLYLESHIPNRLERGLSGRT*WEGNRL
Trigger: TAACCGGTTGCCTTCCCAGCATGTTCTGCCAGATAG...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR CAA 90 bp GTCAGTGTCTCTTTGGTGTGGATTATGTCATGCAGGAGCACAATATaGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCT +
Preference number: 2 (lower is better)
Translates to: VSVSLVWIMSCRSTI*ACFKPFRREASRIA
Trigger: AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCATGACATAATCCACACCAAAGAGACACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR TCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCATTCCAGGTCATAGGTaGGGACATAAAGCCCCTTGT +
Preference number: 2 (lower is better)
Translates to: LFNISTIKPALRFPITVAIPGHR*GHKAPC
Trigger: ACAAGGGGCTTTATGTCCTCACCTATGACCTGGAAT...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTAAGTGTTGTTTTGGCCTaGTGTTCATTGGCTTCTAGC +
Preference number: 2 (lower is better)
Translates to: LADASTVASLSFRLVLALSVVLA*CSLASS
Trigger: GCTAGAAGCCAATGAACAGCAGGCCAAAACAACACT...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 2 (lower is better)
Translates to: LFNISTIKPALRFPITVAAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp TGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGATTCCAATTTGGCTGTaGACTGCCAGACTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: WGLVVLYLESHIPNRLERIPIWL*TARLSF
Trigger: GAAGGAGAGTCTGGCAGTCCACAGCCAAATTGGAAT...CCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CCA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAATCTGGCAGAACATGCTaGGAAGGCAACCGGTTAATC +
Preference number: 2 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKSGRTC*EGNRLI
Trigger: GATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR CAA 90 bp CTGTTCCAAAGTCATTATTGGAGAATCTTGGAATTAGACGGGACATaGGAGGTCAGCTCTTCTAACCTCCAACATGGGAATCCCTCCTAT +
Preference number: 2 (lower is better)
Translates to: LFQSHYWRILELDGT*EVSSSNLQHGNPSY
Trigger: ATAGGAGGGATTCCCATGTTGGAGGTTAGAAGAGCTGACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAATTAGCTTCCCGAGGCTaGCAGCATAATTATCGCAGC +
Preference number: 2 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKLASRG*QHNYRS
Trigger: GCTGCGATAATTATGCTGTCAGCCTCGGGAAGCTAA...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR TCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCCTTACTCAGGCAGGTTaGTTTGGGCTACCCATGTGT +
Preference number: 2 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFLTQAG*FGLPMC
Trigger: ACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAG...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp AGCACAATATTGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCTTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 2 (lower is better)
Translates to: STILACFKPFRREASRIAWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCGTAGCACACCACGGCTaGCCTTTCTCTGGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFVAHHG*PFSGLN
Trigger: ATTTAACCCAGAGAAAGGCCAGCCGTGGTGTGCTAC...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 90 bp GTGTTGTTTTGGCCTGCTGTTCATTGGCTTCTAGCAAGGTGTCTTTaGAATCATGATCCAATACTAAATAGCAGCTGCCTCTGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: VLFWPAVHWLLARCL*NHDPILNSSCLCKS
Trigger: ACTCTTGCAGAGGCAGCTGCTATTTAGTATTGGATCATGATTCAAAAGACACCTTGCTAGAAGCCAATGAACAGCAGGCCAAAACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCTACATTTCCTGAGATaGTCCCTGGACAGAAGCGAT +
Preference number: 2 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYLHFLR*SLDRSD
Trigger: ATCGCTTCTGTCCAGGGATCATCTCAGGAAATGTAG...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR TCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCTTGGAGAACCAGGTCTaGGGTTTGCATCTTCACTCT +
Preference number: 2 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFLENQV*GLHLHS
Trigger: AGAGTGAAGATGCAAACCTCAGACCTGGTTCTCCAA...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 2 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACAGGTGTCAGGAACATTaGAGAACCAGGTCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNRCQEH*RTRSEV
Trigger: AACCTCAGACCTGGTTCTCCAATGTTCCTGACACCT...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 2 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR CAA 90 bp AGTATAATCTGTACACAGCTGTTCCAAAGTCATTATTGGAGAATCTaGGAATTAGACGGGACATTGGAGGTCAGCTCTTCTAACCTCCAA +
Preference number: 2 (lower is better)
Translates to: SIICTQLFQSHYWRI*ELDGTLEVSSSNLQ
Trigger: TTGGAGGTTAGAAGAGCTGACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAGCTGTGTACAGATTATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTAATGAAAACCGAAACTaGAGAAATACAGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFNENRN*RNTALE
Trigger: TTCCAGGGCTGTATTTCTGCAGTTTCGGTTTTCATT...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGACATCTTTGGAACTCTaGTCCCAACTACTTATTCAA +
Preference number: 2 (lower is better)
Translates to: IAAASARVVYSLNSIGVRTSLEL*SQLLIQ
Trigger: TTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGT...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTATATACAGAGGTCTCTaGTTTCTAGGCTGCTACATT +
Preference number: 2 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFIYRGL*FLGCYI
Trigger: AATGTAGCAGCCTAGAAACCAGAGACCTCTGTATAT...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 90 bp CATAATTCCAAGTATAATCTGTACACAGCTGTTCCAAAGTCATTATaGGAGAATCTTGGAATTAGACGGGACATTGGAGGTCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: HNSKYNLYTAVPKSL*ENLGIRRDIGGQLF
Trigger: GAAGAGCTGACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAGCTGTGTACAGATTATACTTGGAATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAATGAAAACCGAAACTaGAGAAATACAGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQNENRN*RNTALE
Trigger: TTCCAGGGCTGTATTTCTGCAGTTTCGGTTTTCATT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTAATGAAAACCGAAACTaGAGAAATACAGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFNENRN*RNTALE
Trigger: TTCCAGGGCTGTATTTCTGCAGTTTCGGTTTTCATT...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR GCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTATTCCCCATCACTGTTaGCATCATCACAGACAATTA +
Preference number: 2 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFIPHHC*HHHRQL
Trigger: TAATTGTCTGTGATGATGGCAACAGTGATGGGGAAT...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTCTTAAATTACATCTTTaGAACTCTGCTCCCAACTAC +
Preference number: 2 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFLKLHL*NSAPNY
Trigger: GTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAG...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGCTTAAATTACATCTTTaGAACTCTGCTCCCAACTAC +
Preference number: 2 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRLKLHL*NSAPNY
Trigger: GTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAG...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAAATATACAGAGGTCTCTaGTTTCTAGGCTGCTACATT +
Preference number: 2 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKIYRGL*FLGCYI
Trigger: AATGTAGCAGCCTAGAAACCAGAGACCTCTGTATAT...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 90 bp CGCATATTCCAAATAGGCTGGAAAGGGGAGCCATCATACCATTTGTaGATATGCATAAGACATTTTCACACGGATATTATAATATGCAAT +
Preference number: 2 (lower is better)
Translates to: RIFQIGWKGEPSYHL*ICIRHFHTDIIICN
Trigger: ATTGCATATTATAATATCCGTGTGAAAATGTCTTATGCATATCAACAAATGGTATGATGGCTCCCCTTTCCAGCCTATTTGGAATATGCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR GCA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAACATCTTTGGAACTCTaGTCCCAACTACTTATTCAA +
Preference number: 2 (lower is better)
Translates to: LNKHHDLSTYICSITQPTTSLEL*SQLLIQ
Trigger: TTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGT...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CCA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACATTCCATCTCAGACATTaGGGGATAGTTACTATTTTT +
Preference number: 2 (lower is better)
Translates to: LNKHHDLSTYICSITQPTFHLRH*GIVTIF
Trigger: AAAAATAGTAACTATCCCCCAATGTCTGAGATGGAA...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 72 bp CTGCACCCCATATGTCCAGCTCAGAGGAATATTCAGTaGCTCCCAGCAAAGCATCAGGGGGCCGGTACCAGA +
Preference number: 3 (lower is better)
Translates to: LHPICPAQRNIQ*LPAKHQGAGTR
Trigger: TCTGGTACCGGCCCCCTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATGGGGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CAA 90 bp ATCCAAACCATTTGGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGTTCCCTCCGGCTTCCTaGCCCCTCAAAAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: IQTIWGTSLGEKYPLALGFPPAS*PLKSSS
Trigger: GCTGCTGCTTTTGAGGGGCAAGGAAGCCGGAGGGAA...CCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR CCA 72 bp CGGTACCAGAGGGTCACGACTTCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAA +
Preference number: 3 (lower is better)
Translates to: RYQRVTTSEEYV*LGMDLARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTCTGGTACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CAA 90 bp ACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTCCTGTTCCAGACAACATGAATGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 3 (lower is better)
Translates to: TRAKRASEVSSSCSRQHEWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...TTCATGTTGTCTGGAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR CCA 72 bp GGGTCACGACTTCTGAAGAGTATGTCTGGCTGGGAATaGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: GSRLLKSMSGWE*TWPGQDQNQPV
Trigger: AACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR CCA 72 bp ACCAGAGGGTCACGACTTCTGAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGGCAAGACCAAAATCAG +
Preference number: 3 (lower is better)
Translates to: TRGSRLLKSMSG*EWTWPGQDQNQ
Trigger: CTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR GCA 72 bp AGCTGCAGCGCGGCTCTCCTTCAGCAATCTCACAAATaGAAAACCTTCCACTCTGGTGACTCCTCATTAGCT +
Preference number: 3 (lower is better)
Translates to: SCSAALLQQSHK*KTFHSGDSSLA
Trigger: AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAGGAGAGCCGCGCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CAA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCCTCAGGCAGGTTGATTaGGGCTACCCATGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVLRQVD*GYPCVF
Trigger: AAAGACACATGGGTAGCCCAAATCAACCTGCCTGAG...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 72 bp GGAGGGAGAGAGAGAGAGACACTATCTGGCAGAACATaGTGGGAAGGCAACCGGTTAATCAAAAGGATTCCA +
Preference number: 3 (lower is better)
Translates to: GGRERETLSGRT*WEGNRLIKRIP
Trigger: TGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGATAGTGTCTCTCTCTCTCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CAA 90 bp GTATGTCTGGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTTTAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 3 (lower is better)
Translates to: VCLAGNGLGPGKTKISQFNVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...AAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR CCA 72 bp TGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTaGCTGTGGACTGCCAGACTCTCCTTCCCAACTCAT +
Preference number: 3 (lower is better)
Translates to: WEGNRLIKRIPI*LWTARLSFPTH
Trigger: ATGAGTTGGGAAGGAGAGTCTGGCAGTCCACAGCCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CAA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACTGGACAGAAGCGATTaGAGTTTCCCTGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LADASTVASLSFRLVLALLDRSD*SFPGCF
Trigger: AAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCAG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 72 bp AGGTGTCAGGAACATTGGAGAACCAGGTCTGAGGTTTaGATCTTCACTCTGGCATGCTACTATGAAGGAGTT +
Preference number: 3 (lower is better)
Translates to: RCQEHWRTRSEV*IFTLACYYEGV
Trigger: AACTCCTTCATAGTAGCATGCCAGAGTGAAGATGCAAACCTCAGACCTGGTTCTCCAATGTTCCTGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 72 bp GGGAGAGAGAGAGAGACACTATCTGGCAGAACATGCTaGGAAGGCAACCGGTTAATCAAAAGGATTCCAATT +
Preference number: 3 (lower is better)
Translates to: GRERETLSGRTC*EGNRLIKRIPI
Trigger: AATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGATAGTGTCTCTCTCTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR CCA 72 bp ACCCTTCAGGAGAGAAGCTTCTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATTCATGCTGATGACTTT +
Preference number: 3 (lower is better)
Translates to: TLQERSFSDSCK*DSFLCIHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGAGAAGCTTCTCTCCTGAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CAA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFSPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTAGATCTCTCATTTTACTaGAGGGGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LADASTVASLSFRLVLALDLSFY*RGVCVC
Trigger: ACACACACACACACCCCTCAAGTAAAATGAGAGATC...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 72 bp GGCAACCGGTTAATCAAAAGGATTCCAATTTGGCTGTaGACTGCCAGACTCTCCTTCCCAACTCATAGAAAA +
Preference number: 3 (lower is better)
Translates to: GNRLIKRIPIWL*TARLSFPTHRK
Trigger: TTTTCTATGAGTTGGGAAGGAGAGTCTGGCAGTCCACAGCCAAATTGGAATCCTTTTGATTAACCGGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CAA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCAGTATGGAGTTAGATTaGAAGCTTCTTAGTAAGCTG +
Preference number: 3 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVSMELD*KLLSKL
Trigger: CAGCTTACTAAGAAGCTTCAAATCTAACTCCATACT...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAATCAAATCCAAACCATTaGGGGAACTTCTCTCGGGGA +
Preference number: 3 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKSNPNH*GNFSRG
Trigger: TCCCCGAGAGAAGTTCCCCAAATGGTTTGGATTTGA...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
3UTR-3UTR CAA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACCTGGACAGAAGCGATTaGAGTTTCCCTGGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNLDRSD*SFPGCF
Trigger: AAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCAG...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCACTTACTCAGGCAGGTaGATTTGGGCTACCCATGTG +
Preference number: 3 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFTYSGR*IWATHV
Trigger: CACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGT...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR TCA 72 bp TGTTCAAGGATGTTGGAAACCCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATAAAGATGCAGCCTGCA +
Preference number: 3 (lower is better)
Translates to: CSRMLETPGNKG*PWNISIKMQPA
Trigger: TGCAGGCTGCATCTTTATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGGGTTTCCAACATCCTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 3 (lower is better)
Translates to: LNKHHDLSTYICSITQPTSPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACTCCCTGAGCTTTCGATaGGTACTAGCATTATCTCTG +
Preference number: 3 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNSLSFR*VLALSL
Trigger: CAGAGATAATGCTAGTACCAATCGAAAGCTCAGGGA...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CCA 72 bp CACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTaGACAGTCTTTGTCAAATGCCTTACTAAAATCAGA +
Preference number: 3 (lower is better)
Translates to: HPAYTVSSFRYS*TVFVKCLTKIR
Trigger: TCTGATTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATGATTCCCCATCACTGTaGCCATCATCACAGACAATT +
Preference number: 3 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNDSPSL*PSSQTI
Trigger: AATTGTCTGTGATGATGGCAACAGTGATGGGGAATC...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGTTAATTAGTTCCTCCTaGCTCTTCCAAAGGATATAC +
Preference number: 3 (lower is better)
Translates to: IAAASARVVYSLNSIGVRLISSS*LFQRIY
Trigger: GTATATCCTTTGGAAGAGCAAGGAGGAACTAATTAA...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCCCTCAGGAAGTCCTTTaGTTAACAATGTTATCCAAG +
Preference number: 3 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFPQEVL*LTMLSK
Trigger: CTTGGATAACATTGTTAACAAAAGGACTTCCTGAGG...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACCCTCAGGAAGTCCTTTaGTTAACAATGTTATCCAAG +
Preference number: 3 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNPQEVL*LTMLSK
Trigger: CTTGGATAACATTGTTAACAAAAGGACTTCCTGAGG...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCTTTCCATCTCAGACATaGGGGGATAGTTACTATTTT +
Preference number: 3 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFFPSQT*GDSYYF
Trigger: AAAATAGTAACTATCCCCCAATGTCTGAGATGGAAA...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGTTTCCATCTCAGACATaGGGGGATAGTTACTATTTT +
Preference number: 3 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRFPSQT*GDSYYF
Trigger: AAAATAGTAACTATCCCCCAATGTCTGAGATGGAAA...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 72 bp TCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATaGCTTACTAAAATCAGATACTTACTCAGGCAGGTT +
Preference number: 3 (lower is better)
Translates to: SSFRYSWTVFVK*LTKIRYLLRQV
Trigger: AACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR GCA 72 bp GGGTTAAATAAACACCATGATTTGAGTACATATATCTaGTCCATCACCCAGCCTACACTGTTTCATCTTTCA +
Preference number: 3 (lower is better)
Translates to: GLNKHHDLSTYI*SITQPTLFHLS
Trigger: TGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTAGTATGGAGTTAGATTaGAAGCTTCTTAGTAAGCTG +
Preference number: 3 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVSMELD*KLLSKL
Trigger: CAGCTTACTAAGAAGCTTCAAATCTAACTCCATACT...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACACTCTTATCTGTCTTTTaGGGAAATCAACCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: LNKHHDLSTYICSITQPTLLSVF*GNQPSS
Trigger: GCTAGAAGGTTGATTTCCCAAAAAGACAGATAAGAG...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAACTCTTATCTGTCTTTTaGGGAAATCAACCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKLLSVF*GNQPSS
Trigger: GCTAGAAGGTTGATTTCCCAAAAAGACAGATAAGAG...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR-3UTR CAA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTAGAGCCATCATACCATTaGTTGATATGCATAAGACAT +
Preference number: 3 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLEPSYH*LICIRH
Trigger: ATGTCTTATGCATATCAACAAATGGTATGATGGCTC...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CCTTCGCCGGTAGAGGTGGTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCGAGGGTCACGACTTCTaGAGAGTATGTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPVEVVTRAKRASEVSSEGHDF*RVCLAG
Trigger: CCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTC...GGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGACCACCTCTACCGGCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CCTTCGCCGGTAGAGGTGGTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCGGCAAAGCGGGCAAGTaGAGTCTCTTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PSPVEVVTRAKRASEVSSGKAGK*SLFLLF
Trigger: GAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCC...GGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGACCACCTCTACCGGCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CAGGTCCCTGTGAAGAACGTGTTGGTGGTGGATGTACGCCAGGCCCCGCAAAAGGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QVPVKNVLVVDVRQAPQKGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...CTTTTGCGGGGCCTGGCGTACATCCACCACCAACACGTTCTTCACAGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CAGGTCCCTGTGAAGAACGTGTTGGTGGTGGATGTACGCCAGGCCCCGCAAAAGGCACTTCAGACTGGGTaGCAGAGCAAGATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QVPVKNVLVVDVRQAPQKALQTG*QSKILA
Trigger: AGCAAGGATCTTGCTCTGTCACCCAGTCTGAAGTGC...CTTTTGCGGGGCCTGGCGTACATCCACCACCAACACGTTCTTCACAGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp TACCAGAGGGTCACGACTTCTGAAGAGTATGTCTGGCTGGGAATGGACTTGGCCAGAACGTGTTGGTGGTaGATGTACGCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: YQRVTTSEEYVWLGMDLARTCWW*MYARPR
Trigger: GCGGGGCCTGGCGTACATCCACCACCAACACGTTCT...GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGTCCCTCCGGCTTCCTTaGCCCTCAAAAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPSLRLP*PSKAAA
Trigger: AGCTGCTGCTTTTGAGGGGCAAGGAAGCCGGAGGGA...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CATATGTCCAGCTCAGAGGAATATTCAGTGGCTCCCAGCAAAGCATCAGGGGGCCTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: HMSSSEEYSVAPSKASGGLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...GCCCCCTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp CCTTCGCCGGTAGAGGTGGTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: PSPVEVVTRAKRASEVSSWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...GGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGACCACCTCTACCGGCGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCGGAGAAGTATCCTCTTaGCTTGGGGACAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFGEVSS*LGDSGM
Trigger: CATGCCACTGTCCCCAAGGCAAGAGGATACTTCTCC...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp GTATGTCTGGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTTTTTCCTCCTGCCTCTCTaGGGACTCCTCTGCAACCAT +
Preference number: 4 (lower is better)
Translates to: VCLAGNGLGPGKTKISQFFLLPL*GLLCNH
Trigger: ATGGTTGCAGAGGAGTCCCCAGAGAGGCAGGAGGAA...AAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCAGTGGCATGAAAAGCTaGGATTTCCCTCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFSGMKS*DFPPAS
Trigger: GGAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACT...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp ATCCAAACCATTTGGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGGAGGGTCACGACTTCTaGAGAGTATGTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IQTIWGTSLGEKYPLALGEGHDF*RVCLAG
Trigger: CCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTC...CCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCTCTGGCAGAACATGCTaGGAAGGCAACCGGTTAATC +
Preference number: 4 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFSGRTC*EGNRLI
Trigger: GATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp TACCAGAGGGTCACGACTTCTGAAGAGTATGTCTGGCTGGGAATGGACTTGGCCCAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: YQRVTTSEEYVWLGMDLAQVQVR*GCPKRE
Trigger: CTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTG...GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp AGGAGAGAAGCTTCTCGGATAGCTGTAAATGGGACTCCTTCCTCTGCATTCATGAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RREASRIAVNGTPSSAFMSPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...CATGAATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGAGAAGCTTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGAGGGTCACGACTTCTaGAGAGTATGTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVEGHDF*RVCLAG
Trigger: CCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GTATGTCTGGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTTTTCAGATGTGCACAACTaGAAACGAGGCAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VCLAGNGLGPGKTKISQFSDVHN*KRGSCG
Trigger: ACCACAGCTGCCTCGTTTTCAGTTGTGCACATCTGA...AAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGAGAAAACCCGCACTTaGACCTTTCCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVEKTRT*TFPPLP
Trigger: AGGCAGTGGGGGAAAGGTTCAAGTGCGGGTTTTCTC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CATATGTCCAGCTCAGAGGAATATTCAGTGGCTCCCAGCAAAGCATCAGGGGGCCAGCTTGAAGTCCCCTaGGGTGAAATGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: HMSSSEEYSVAPSKASGGQLEVP*GEMKSW
Trigger: CCATGACTTCATTTCACCCCAGGGGACTTCAAGCTG...GCCCCCTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVKSMSG*EWTWPG
Trigger: CCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTT...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp GTATGTCTGGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTTTTCGAGGCGTAGGCAGTaGGAACCATTCTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: VCLAGNGLGPGKTKISQFSRRRQ*EPFWIV
Trigger: TACAATCCAGAATGGTTCCCACTGCCTACGCCTCGA...AAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGAGAGAGACACTATCTaGCAGAACATGCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPERDTI*QNMLGR
Trigger: CCTTCCCAGCATGTTCTGCCAGATAGTGTCTCTCTC...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp ACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTCCTGTTCCAGACAACATGAATTTAGGTCTGTTAGATaGTGGCTCTGCCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TRAKRASEVSSSCSRQHEFRSVR*WLCLEQ
Trigger: CTGCTCCAGGCAGAGCCATCATCTAACAGACCTAAA...TTCATGTTGTCTGGAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTTCCGTGGTCTCAGGCTaGCTCCTCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLASVVSG*LLRQLC
Trigger: ACACAGCTGTCGGAGGAGTCAGCCTGAGACCACGGA...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGAATAAAGATGCAGCCTaGACCCCATATGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPNKDAA*TPYVQL
Trigger: GAGCTGGACATATGGGGTGCAGGCTGCATCTTTATT...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp AGGAGAGAAGCTTCTCGGATAGCTGTAAATGGGACTCCTTCCTCTGCATTCATGCCTTGGTTTTCCTCCTaGCTCTCTGGGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RREASRIAVNGTPSSAFMPWFSS*LSGDSS
Trigger: AGAGGAGTCCCCAGAGAGGCAGGAGGAAAACCAAGG...CATGAATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGAGAAGCTTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCCAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVQVQVR*GCPKRE
Trigger: CTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTG...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLASPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVASPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTGGAAGCTGGTACAGCTaGGATGGCAGGGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLAGSWYS*DGRALK
Trigger: TTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCC...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGGGAGAAATTGTAAGTaGACACAGGAGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVGRNCK*TQEWQV
Trigger: GACCTGCCACTCCTGTGTTCACTTACAATTTCTCCC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTAGAACGTGTTGGTGGTaGATGTACGCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFRTCWW*MYARPR
Trigger: GCGGGGCCTGGCGTACATCCACCACCAACACGTTCT...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTCCTGGATGCTGAGACATATACTGGGCCAGGTCTGTGTGCATGTATTCAAAAAAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLDAETYTGPGLCACIQKKSMSG*EWTWPG
Trigger: CCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTT...TTTTTGAATACATGCACACAGACCTGGCCCAGTATATGTCTCAGCATCCAGGAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCTCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVSEEYV*LGMDLA
Trigger: GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGA...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGATGCTGTGGGTAATCTaGGGTCTCGTTGTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPMLWVI*GLVVLY
Trigger: ATACAAGACAACGAGACCCCAGATTACCCACAGCAT...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp TACCAGAGGGTCACGACTTCTGAAGAGTATGTCTGGCTGGGAATGGACTTGGCCCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATA +
Preference number: 4 (lower is better)
Translates to: YQRVTTSEEYVWLGMDLAPGNKG*PWNISI
Trigger: TATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGG...GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVEMAGR*NNHEQV
Trigger: CACTTGTTCATGATTATTTCAGCGCCCTGCCATCTC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCATTCCAGGTCATAGGTaGGGACATAAAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVIPGHR*GHKAPC
Trigger: ACAAGGGGCTTTATGTCCTCACCTATGACCTGGAAT...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GGCCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGTGCAACCATCTTTGCTaGTTCCTCCTCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GQVCVHVFKNECQCLFGVCNHLC*FLLPCS
Trigger: TGAGCAGGGGAGGAGGAATCAGCAAAGATGGTTGCA...CACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCTCCGTGGTCTCAGGCTaGCTCCTCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFSVVSG*LLRQLC
Trigger: ACACAGCTGTCGGAGGAGTCAGCCTGAGACCACGGA...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCGTGGTCTCAGGCTaGCTCCTCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFSVVSG*LLRQLC
Trigger: ACACAGCTGTCGGAGGAGTCAGCCTGAGACCACGGA...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGGAGAAAACCCGCACTTaGACCTTTCCCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: IAAASARVVYSLNSIGVREKTRT*TFPPLP
Trigger: AGGCAGTGGGGGAAAGGTTCAAGTGCGGGTTTTCTC...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CATATGTCCAGCTCAGAGGAATATTCAGTGGCTCCCAGCAAAGCATCAGGGGGCTGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: HMSSSEEYSVAPSKASGGWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...GCCCCCTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCAATAAAGATGCAGCCTaGACCCCATATGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVNKDAA*TPYVQL
Trigger: GAGCTGGACATATGGGGTGCAGGCTGCATCTTTATT...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCCAGCTTCAGGAACCCTaGCCAGCCTGTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVAQLQEP*PACSRQ
Trigger: TTGTCTGGAACAGGCTGGGCAGGGTTCCTGAAGCTG...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYIIIMNK*FLGGDA
Trigger: CGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTAT...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGCTGTTTGCTGGAAGCTaGTCACACCCAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLLFAGS*SHPKGR
Trigger: TCTTCCCTTTGGGTGTGAGCAGCTTCCAGCAAACAG...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp ATCCAAACCATTTGGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGCCCAGGTTCACAATTTaGATAAATCTGGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: IQTIWGTSLGEKYPLALGPRFTI*INLGCS
Trigger: TGAGCACCCCAGATTTATGCAAATTGTGAACCTGGG...CCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGTTTCCACTTGGGCATTaGTTTTCCCAGGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPFPLGH*FSQVHN
Trigger: ATTGTGAACCTGGGAAAAGCAATGCCCAAGTGGAAA...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGAGAACGTGTTGGTGGTaGATGTACGCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRRTCWW*MYARPR
Trigger: GCGGGGCCTGGCGTACATCCACCACCAACACGTTCT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGAGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GLVVLYLESHIPNRLERGGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGCGGAGACGCGGTCTCTaGGAAAGCCTTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWRRRGL*ESLLAS
Trigger: AGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCG...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACGGAGACGCGGTCTCTaGGAAAGCCTTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: LADASTVASLSFRLVLALRRRGL*ESLLAS
Trigger: AGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGGGCATTGCTAGTATCCTCTTGCCTTaGGGACAGTGGCATGAAAAG +
Preference number: 4 (lower is better)
Translates to: TKAHPQNLLRAPFHLGIASILLP*GQWHEK
Trigger: CTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACT...AGCAATGCCCAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTCAGCTCTGCCTCGCCTaGCCTAAACTTCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLAQLCLA*PKLLPL
Trigger: TAAGGGCAGAAGTTTAGGCCAGGCGAGGCAGAGCTG...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp GGCCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGGGCTGCATAGAGCCATaGTTGTGCCACAGCACTTCA +
Preference number: 4 (lower is better)
Translates to: GQVCVHVFKNECQCLFGVGCIEP*LCHSTS
Trigger: TGAAGTGCTGTGGCACAACCATGGCTCTATGCAGCC...CACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR CAA 72 bp GCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATaGGTACTAGCATTATCTCTGGGGGACAGCGAAATT +
Preference number: 4 (lower is better)
Translates to: ADASTVASLSFR*VLALSLGDSEI
Trigger: AATTTCGCTGTCCCCCAGAGATAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGGAAGCTGGTACAGCTaGGATGGCAGGGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPGSWYS*DGRALK
Trigger: TTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGGGAAGCTGGTACAGCTaGGATGGCAGGGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQGSWYS*DGRALK
Trigger: TTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCC...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACGGAAGCTGGTACAGCTaGGATGGCAGGGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNGSWYS*DGRALK
Trigger: TTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCC...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAATGCCTCGCCTCCCTCTaGACAATGGTAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKCLASL*TMVAAA
Trigger: TGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCA...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTGCCTCGCCTCCCTCTaGACAATGGTAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQCLASL*TMVAAA
Trigger: TGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCA...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGAAACCTTCCACTCTGGTaGCTCCTCATTAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GLVVLYLESHIPNRLERGNLPLW*LLISFP
Trigger: CGGGAAGCTAATGAGGAGTCACCAGAGTGGAAGGTT...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCTGGACAGAAGCGATTTaGGTTTCCCTGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYIWTEAI*VSLAAF
Trigger: AAAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCA...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTACTCAGGCAGGTTaGTTTGGGCTACCCATGTGT +
Preference number: 4 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCLTQAG*FGLPMC
Trigger: ACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAG...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCTTGGAGAACCAGGTCTaGGGTTTGCATCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYILENQV*GLHLHS
Trigger: AGAGTGAAGATGCAAACCTCAGACCTGGTTCTCCAA...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCCTCAAGAACTCTTGCTaGTGCGTCAACAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYILKNSC*CVNSSI
Trigger: GATGCTACTGTTGACGCATCAGCAAGAGTTCTTGAG...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCAGCTTCAGGAACCCTaGCCAGCCTGTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFQLQEP*PACSRQ
Trigger: TTGTCTGGAACAGGCTGGGCAGGGTTCCTGAAGCTG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWIIMNK*FLGGDA
Trigger: CGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTAT...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCCTTGGTTTTCCTCCTaGCTCTCTGGGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFPWFSS*LSGDSS
Trigger: AGAGGAGTCCCCAGAGAGGCAGGAGGAAAACCAAGG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFKSMSG*EWTWPG
Trigger: CCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTT...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATC +
Preference number: 4 (lower is better)
Translates to: LADASTVASLSFRLVLALLVQLR*QGAEII
Trigger: GATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGATTCCAATTTGGCTGTaGACTGCCAGACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLIPIWL*TARLSF
Trigger: GAAGGAGAGTCTGGCAGTCCACAGCCAAATTGGAAT...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGTGGCCTTTTACTCTTaGACTTCTGGGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPVAFYS*TSGHGQ
Trigger: CTGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCAC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTCAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLAQVQVR*GCPKRE
Trigger: CTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTG...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVSPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGAGGGTCACGACTTCTaGAGAGTATGTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPEGHDF*RVCLAG
Trigger: CCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTGAGGGTCACGACTTCTaGAGAGTATGTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFEGHDF*RVCLAG
Trigger: CCCAGCCAGACATACTCTTCAGAAGTCGTGACCCTC...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTGCAACCATCTTTGCTaGTTCCTCCTCCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFCNHLC*FLLPCS
Trigger: TGAGCAGGGGAGGAGGAATCAGCAAAGATGGTTGCA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR TCA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATTGCCTCGCCTCCCTCTaGACAATGGTAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNCLASL*TMVAAA
Trigger: TGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCA...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTTTAGCTTCCCGAGGCTaGCAGCATAATTATCGCAGC +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLALASRG*QHNYRS
Trigger: GCTGCGATAATTATGCTGTCAGCCTCGGGAAGCTAA...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACTCAAGAACTCTTGCTaGTGCGTCAACAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: LADASTVASLSFRLVLALLKNSC*CVNSSI
Trigger: GATGCTACTGTTGACGCATCAGCAAGAGTTCTTGAG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCAGCTTCAGGAACCCTaGCCAGCCTGTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPQLQEP*PACSRQ
Trigger: TTGTCTGGAACAGGCTGGGCAGGGTTCCTGAAGCTG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGACAGCTTGAAGTCCCCTaGGGTGAAATGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: GLVVLYLESHIPNRLERGQLEVP*GEMKSW
Trigger: CCATGACTTCATTTCACCCCAGGGGACTTCAAGCTG...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATAGAACGTGTTGGTGGTaGATGTACGCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYRTCWW*MYARPR
Trigger: GCGGGGCCTGGCGTACATCCACCACCAACACGTTCT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAAAGAACGTGTTGGTGGTaGATGTACGCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPSQLIEKEKGGRKKERERTCWW*MYARPR
Trigger: GCGGGGCCTGGCGTACATCCACCACCAACACGTTCT...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ACTCCTTCCTCTGCATTCATGCTGATGACTTTTAAAGCCACTAGTTGTCCATTTGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: TPSSAFMLMTFKATSCPFGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...AAATGGACAACTAGTGGCTTTAAAAGTCATCAGCATGAATGCAGAGGAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQKSMSG*EWTWPG
Trigger: CCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGGATCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGLCACIQKRMSVSLWCGSEEYV*LGMDLA
Trigger: GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGA...TCCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGATCGAGGCGTAGGCAGTaGGAACCATTCTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: GLVVLYLESHIPNRLERGSRRRQ*EPFWIV
Trigger: TACAATCCAGAATGGTTCCCACTGCCTACGCCTCGA...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGTTGCCTTGGGGACAGTaGCATGAAAAGCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWLPWGQ*HEKLGF
Trigger: AAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAA...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGCTCAAATCCAAACCATTTaGGGAACTTCTCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WQNMLGRQPVNQKDSNLAQIQTI*GTSLGE
Trigger: CTCCCCGAGAGAAGTTCCCCAAATGGTTTGGATTTG...AGCCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCCAGAGGTCAGCAGCGTaGAGCTTTCATATGACTCAC +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVAQRSAA*SFHMTH
Trigger: GTGAGTCATATGAAAGCTCCACGCTGCTGACCTCTG...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652192.3
3UTR CAA 72 bp GCACACGTGTTAGCTAAGACAGATCTCTCATTTTACTaGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AHVLAKTDLSFY*RGVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATCTGTCTTAGCTAACACGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTTTAGGTCTGTTAGATaGTGGCTCTGCCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFFRSVR*WLCLEQ
Trigger: CTGCTCCAGGCAGAGCCATCATCTAACAGACCTAAA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR TCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTGTGGCCTTTTACTCTTaGACTTCTGGGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVVAFYS*TSGHGQ
Trigger: CTGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCAC...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATAGCCCTCCTGGATGCTaGGACATATACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYSPPGC*DIYWAR
Trigger: CCTGGCCCAGTATATGTCTCAGCATCCAGGAGGGCT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTGGTTTCAGGTCCCTGTaGAGAACGTGTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVGFRSL*RTCWWW
Trigger: CCACCACCAACACGTTCTTCACAGGGACCTGAAACC...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATCTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAAGGAAGCTGGTACAGCTaGGATGGCAGGGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKGSWYS*DGRALK
Trigger: TTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCC...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCTTACTCAGGCAGGTTaGTTTGGGCTACCCATGTGT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFLTQAG*FGLPMC
Trigger: ACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTCCTGGATGCTGAGACATATACTGGGCCAGGTCTGTGTGCATGTATTCAAAAAGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLDAETYTGPGLCACIQKACIQM*TTENEA
Trigger: TGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGC...TTTTTGAATACATGCACACAGACCTGGCCCAGTATATGTCTCAGCATCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp GGCCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGACATCAGACAGGGATTaGTTGCATTCAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GQVCVHVFKNECQCLFGVTSDRD*LHSDVH
Trigger: GTGCACATCTGAATGCAAGCAATCCCTGTCTGATGT...CACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp AGCACAATATTGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCTAATAAAGATGCAGCCTaGACCCCATATGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: STILACFKPFRREASRIANKDAA*TPYVQL
Trigger: GAGCTGGACATATGGGGTGCAGGCTGCATCTTTATT...AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCTTCAGGAACCCTaGCCAGCCTGTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVQLQEP*PACSRQ
Trigger: TTGTCTGGAACAGGCTGGGCAGGGTTCCTGAAGCTG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCATCTTCACTCTGGCATaGTACTATGAAGGAGTTACC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYIIFTLA*YYEGVT
Trigger: GGTAACTCCTTCATAGTAGCATGCCAGAGTGAAGAT...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTGTTCTCTCCCTTTTTaGCAGAGGTCAGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPCSLPF*QRSAAW
Trigger: CCACGCTGCTGACCTCTGGCAAAAAGGGAGAGAACA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTCCTGGATGCTGAGACATATACTGGGCCAGGTCTGTGTGCATGTATTCAAAAATCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLDAETYTGPGLCACIQKSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...TTTTTGAATACATGCACACAGACCTGGCCCAGTATATGTCTCAGCATCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp GGCCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GQVCVHVFKNECQCLFGVSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...CACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp AGCACAATATTGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCTCAGAGGAATATTCAGTaGCTCCCAGCAAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: STILACFKPFRREASRIAQRNIQ*LPAKHQ
Trigger: CTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTG...AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCGGAGACGCGGTCTCTaGGAAAGCCTTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQRRRGL*ESLLAS
Trigger: AGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCG...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATC +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFLVQLR*QGAEII
Trigger: GATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGATATTCCAAATAGGCTaGAAAGGGGAGCCATCATAC +
Preference number: 4 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLIFQIG*KGEPSY
Trigger: GTATGATGGCTCCCCTTTCCAGCCTATTTGGAATAT...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTGTAGCACACCACGGCTaGCCTTTCTCTGGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFVAHHG*PFSGLN
Trigger: ATTTAACCCAGAGAAAGGCCAGCCGTGGTGTGCTAC...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAGGTGTCAGGAACATTaGAGAACCAGGTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IAAASARVVYSLNSIGVRRCQEH*RTRSEV
Trigger: AACCTCAGACCTGGTTCTCCAATGTTCCTGACACCT...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp ATGCTGTGGGTAATCTGGGGTCTCGTTGTCTTGTATTaGGAATCGCATATTCCAAATAGGCTGGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: MLWVIWGLVVLY*ESHIPNRLERG
Trigger: TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGATTACCCACAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPQVQVR*GCPKRE
Trigger: CTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTACTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCTGTTCCAGACAACATaGAGGCTTCGAGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYLFQTT*RLRGVG
Trigger: GCCTACGCCTCGAAGCCTTCATGTTGTCTGGAACAG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKEMAGR*NNHEQV
Trigger: CACTTGTTCATGATTATTTCAGCGCCCTGCCATCTC...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCGGGAGAAATTGTAAGTaGACACAGGAGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFGRNCK*TQEWQV
Trigger: GACCTGCCACTCCTGTGTTCACTTACAATTTCTCCC...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVAWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTACAGCTTCAGGAACCCTaGCCAGCCTGTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLQLQEP*PACSRQ
Trigger: TTGTCTGGAACAGGCTGGGCAGGGTTCCTGAAGCTG...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQIIMNK*FLGGDA
Trigger: CGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTAT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPIIMNK*FLGGDA
Trigger: CGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTAT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRIIMNK*FLGGDA
Trigger: CGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTAT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTCAGCTTGAAGTCCCCTaGGGTGAAATGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFQLEVP*GEMKSW
Trigger: CCATGACTTCATTTCACCCCAGGGGACTTCAAGCTG...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: IAAASARVVYSLNSIGVRSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGCTGGGAATGGACTTaGCCCGGGCAAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYGWEWT*PGQDQN
Trigger: ATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCC...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAAAAGAGTATGTCTGGCTaGGAATGGACTTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SPSQLIEKEKGGRKKEREKSMSG*EWTWPG
Trigger: CCCGGGCCAAGTCCATTCCCAGCCAGACATACTCTT...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSEEYV*LGMDLA
Trigger: GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSEEYV*LGMDLA
Trigger: GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGA...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTCGAGGCGTAGGCAGTaGGAACCATTCTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSRRRQ*EPFWIV
Trigger: TACAATCCAGAATGGTTCCCACTGCCTACGCCTCGA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTCGAGGCGTAGGCAGTaGGAACCATTCTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSRRRQ*EPFWIV
Trigger: TACAATCCAGAATGGTTCCCACTGCCTACGCCTCGA...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCGGAGACGCGGTCTCTaGGAAAGCCTTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVRRRGL*ESLLAS
Trigger: AGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQLVQLR*QGAEII
Trigger: GATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAG...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATC +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRLVQLR*QGAEII
Trigger: GATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAG...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTTTGCTAAACTGGGCTaGGTGGTGACCTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFFAKLG*VVTFLV
Trigger: TACCAGAAAGGTCACCACCCAGCCCAGTTTAGCAAA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTTCCTCCTGCCTCTCTaGGGACTCCTCTGCAACCAT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYFLLPL*GLLCNH
Trigger: ATGGTTGCAGAGGAGTCCCCAGAGAGGCAGGAGGAA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CCA 90 bp AGCACAATATTGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCTCTTGATTCTGTGAAGTaGGCACTTCCTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: STILACFKPFRREASRIALDSVK*ALPWFS
Trigger: GGAAAACCAAGGAAGTGCCCACTTCACAGAATCAAG...AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGTAGCACACCACGGCTaGCCTTTCTCTGGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPVAHHG*PFSGLN
Trigger: ATTTAACCCAGAGAAAGGCCAGCCGTGGTGTGCTAC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp TGGCCTGCTGTTCATTGGCTTCTAGCAAGGTGTCTTTaGAATCATGATCCAATACTAAATAGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WPAVHWLLARCL*NHDPILNSSCL
Trigger: GAGGCAGCTGCTATTTAGTATTGGATCATGATTCAAAAGACACCTTGCTAGAAGCCAATGAACAGCAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTCAGATGTGCACAACTaGAAACGAGGCAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFSDVHN*KRGSCY
Trigger: ATAACAGCTGCCTCGTTTTCAGTTGTGCACATCTGA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260967.6
CDS-3UTR TCA 90 bp TGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATA +
Preference number: 4 (lower is better)
Translates to: WGLVVLYLESHIPNRLERPGNKG*PWNISI
Trigger: TATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGG...CCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPEMAGR*NNHEQV
Trigger: CACTTGTTCATGATTATTTCAGCGCCCTGCCATCTC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYEMAGR*NNHEQV
Trigger: CACTTGTTCATGATTATTTCAGCGCCCTGCCATCTC...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCATTCCAGGTCATAGGTaGGGACATAAAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPIPGHR*GHKAPC
Trigger: ACAAGGGGCTTTATGTCCTCACCTATGACCTGGAAT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGATTCCAGGTCATAGGTaGGGACATAAAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRIPGHR*GHKAPC
Trigger: ACAAGGGGCTTTATGTCCTCACCTATGACCTGGAAT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTCAGATGTGCACAACTaGAAACGAGGCAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSDVHN*KRGSLL
Trigger: AAGCAAGCTGCCTCGTTTTCAGTTGTGCACATCTGA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR TCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTATTGGGGACAGTGGCATaGAAAGCTGGGATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLLGTVA*KAGISL
Trigger: GAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAA...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR TCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCTGGACAGAAGCGATTTaGGTTTCCCTGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFWTEAI*VSLAAF
Trigger: AAAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCA...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCTACATTTCCTGAGATaGTCCCTGGACAGAAGCGAT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPLHFLR*SLDRSD
Trigger: ATCGCTTCTGTCCAGGGATCATCTCAGGAAATGTAG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCAGACAGGGATTGCTTaGATTCAGATGTGCACAACT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFQTGIA*IQMCTT
Trigger: AGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTTCAGCAATCTCACAAATGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTTGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: LQQSHKCKTFHSGDSSLAWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...AGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCATTTGTGAGATTGCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAATAAAGATGCAGCCTaGACCCCATATGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQNKDAA*TPYVQL
Trigger: GAGCTGGACATATGGGGTGCAGGCTGCATCTTTATT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACAATAAAGATGCAGCCTaGACCCCATATGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNNKDAA*TPYVQL
Trigger: GAGCTGGACATATGGGGTGCAGGCTGCATCTTTATT...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGCATAATTATCGCAGCTaGTTCACTCATCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WGLVVLYLESHIPNRLERHNYRS*FTHQEA
Trigger: AGCTTCCTGATGAGTGAAGCAGCTGCGATAATTATG...CCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGTTAAATAATACTGTTTaGTGGAAGCTGCTCACACCC +
Preference number: 4 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWLNNTV*WKLLTP
Trigger: GGGTGTGAGCAGCTTCCAGCAAACAGTATTATTTAA...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCATCTTCACTCTGGCATaGTACTATGAAGGAGTTACC +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVAIFTLA*YYEGVT
Trigger: GGTAACTCCTTCATAGTAGCATGCCAGAGTGAAGAT...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTAAATAGCAGCTaGCTCTGCAAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCILNSS*LCKSCV
Trigger: TACACAACTCTTGCAGAGGCAGCTGCTATTTAGTAT...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCTTGAAGTCCCCTaGGGTGAAATGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVQLEVP*GEMKSW
Trigger: CCATGACTTCATTTCACCCCAGGGGACTTCAAGCTG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTAATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: LADASTVASLSFRLVLALITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCAGAGGAATATTCAGTaGCTCCCAGCAAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPQRNIQ*LPAKHQ
Trigger: CTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTTCGAGGCGTAGGCAGTaGGAACCATTCTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVSRRRQ*EPFWIV
Trigger: TACAATCCAGAATGGTTCCCACTGCCTACGCCTCGA...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGTTTGCTAAACTGGGCTaGGTGGTGACCTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRFAKLG*VVTFLV
Trigger: TACCAGAAAGGTCACCACCCAGCCCAGTTTAGCAAA...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGCAGAAATACAGCCCTaGAAGAACCTTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPAEIQP*KNLGDL
Trigger: GAGATCACCAAGGTTCTTCCAGGGCTGTATTTCTGC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTCGATTTGAGTTTCCCTaGCTGCTTTTAGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFRFEFP*LLLEGV
Trigger: GACTCCTTCTAAAAGCAGCCAGGGAAACTCAAATCG...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTCAGGCAGGTTGATTTaGGCTACCCATGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFSGRLI*ATHVSF
Trigger: AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTGGCCTGCTGTTCATTaGCTTCTAGCAAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPWPAVH*LLARCL
Trigger: AAGACACCTTGCTAGAAGCCAATGAACAGCAGGCCA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp TCTTTGGTGTGGATTATGTCATGCAGGAGCACAATATaGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLVWIMSCRSTI*ACFKPFRREAS
Trigger: AGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCATGACATAATCCACACCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
3UTR CAA 72 bp TGTACACAGCTGTTCCAAAGTCATTATTGGAGAATCTaGGAATTAGACGGGACATTGGAGGTCAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CTQLFQSHYWRI*ELDGTLEVSSS
Trigger: AGAAGAGCTGACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAGCTGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACACAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNKHHDLSTYICSITQPTQVQVR*GCPKRE
Trigger: CTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTG...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATA +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFPGNKG*PWNISI
Trigger: TATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATA +
Preference number: 4 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFPGNKG*PWNISI
Trigger: TATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGG...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGCTCAACTTCCTAATTTaGGTGGACCCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQLNFLI*VDPVFS
Trigger: ACTGAACACTGGGTCCACTCAAATTAGGAAGTTGAG...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR TCA 90 bp ACTCCTTCCTCTGCATTCATGCTGATGACTTTTAAAGCCACTAGTTGTCCATTTCTCAACTTCCTAATTTaGGTGGACCCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: TPSSAFMLMTFKATSCPFLNFLI*VDPVFS
Trigger: ACTGAACACTGGGTCCACTCAAATTAGGAAGTTGAG...AAATGGACAACTAGTGGCTTTAAAAGTCATCAGCATGAATGCAGAGGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPACIQM*TTENEA
Trigger: TGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGC...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQACIQM*TTENEA
Trigger: TGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGC...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTACTATCTGGCAGAACATaGTGGGAAGGCAACCGGTTA +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLLSGRT*WEGNRL
Trigger: TAACCGGTTGCCTTCCCAGCATGTTCTGCCAGATAG...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGATTCCCCATCACTGTTaGCATCATCACAGACAATTA +
Preference number: 4 (lower is better)
Translates to: IAAASARVVYSLNSIGVRIPHHC*HHHRQL
Trigger: TAATTGTCTGTGATGATGGCAACAGTGATGGGGAAT...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTAACATCTTTGGAACTCTaGTCCCAACTACTTATTCAA +
Preference number: 4 (lower is better)
Translates to: LADASTVASLSFRLVLALTSLEL*SQLLIQ
Trigger: TTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGT...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGTGTTGTTTTGGCCTaGTGTTCATTGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSVVLA*CSLASS
Trigger: GCTAGAAGCCAATGAACAGCAGGCCAAAACAACACT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCAGCTTGAAGTCCCCTaGGGTGAAATGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYQLEVP*GEMKSW
Trigger: CCATGACTTCATTTCACCCCAGGGGACTTCAAGCTG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGGAATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: PGLCACIQKRMSVSLWCGITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...TCCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAATCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTATCTGAAGAGTATGTCTaGCTGGGAATGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLSEEYV*LGMDLA
Trigger: GGCCAAGTCCATTCCCAGCCAGACATACTCTTCAGA...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGGAATATTCAGTaGCTCCCAGCAAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVQRNIQ*LPAKHQ
Trigger: CTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAACTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATC +
Preference number: 4 (lower is better)
Translates to: SPSQLIEKEKGGRKKERELVQLR*QGAEII
Trigger: GATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAG...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACTCAGGCAGGTTGATTTaGGCTACCCATGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNSGRLI*ATHVSF
Trigger: AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGA...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTG +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYEMAGR*NNHEQV
Trigger: CACTTGTTCATGATTATTTCAGCGCCCTGCCATCTC...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATATTCCAGGTCATAGGTaGGGACATAAAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYIPGHR*GHKAPC
Trigger: ACAAGGGGCTTTATGTCCTCACCTATGACCTGGAAT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR TCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAATTGGAGAACCAGGTCTaGGGTTTGCATCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKLENQV*GLHLHS
Trigger: AGAGTGAAGATGCAAACCTCAGACCTGGTTCTCCAA...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTACATCAGACAGGGATTaGTTGCATTCAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVTSDRD*LHSDVH
Trigger: GTGCACATCTGAATGCAAGCAATCCCTGTCTGATGT...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACAATAGCAGCTGCCTCTaGAAGAGTTGTGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNNSSCL*KSCVFS
Trigger: AGAGAATACACAACTCTTGCAGAGGCAGCTGCTATT...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACAATAGCAGCTGCCTCTaGAAGAGTTGTGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYNSSCL*KSCVFS
Trigger: AGAGAATACACAACTCTTGCAGAGGCAGCTGCTATT...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAACAGAGGAATATTCAGTaGCTCCCAGCAAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SPSQLIEKEKGGRKKEREQRNIQ*LPAKHQ
Trigger: CTGATGCTTTGCTGGGAGCCACTGAATATTCCTCTG...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTTTGCTAAACTGGGCTaGGTGGTGACCTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYFAKLG*VVTFLV
Trigger: TACCAGAAAGGTCACCACCCAGCCCAGTTTAGCAAA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAATTTGCTAAACTGGGCTaGGTGGTGACCTTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKFAKLG*VVTFLV
Trigger: TACCAGAAAGGTCACCACCCAGCCCAGTTTAGCAAA...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCTTGATTCTGTGAAGTaGGCACTTCCTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVLDSVK*ALPWFS
Trigger: GGAAAACCAAGGAAGTGCCCACTTCACAGAATCAAG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCCTTAAATTACATCTTTaGAACTCTGCTCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVALKLHL*NSAPNY
Trigger: GTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAG...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCGATTTGAGTTTCCCTaGCTGCTTTTAGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVRFEFP*LLLEGV
Trigger: GACTCCTTCTAAAAGCAGCCAGGGAAACTCAAATCG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAATGGCCTGCTGTTCATTaGCTTCTAGCAAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKWPAVH*LLARCL
Trigger: AAGACACCTTGCTAGAAGCCAATGAACAGCAGGCCA...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCAGACAGGGATTGCTTaGATTCAGATGTGCACAACT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYQTGIA*IQMCTT
Trigger: AGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATACATCAGACAGGGATTaGTTGCATTCAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYTSDRD*LHSDVH
Trigger: GTGCACATCTGAATGCAAGCAATCCCTGTCTGATGT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260967.6
ENST00000410091.7
CDS-3UTR GCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAATGGGACTCCTTCCTCTaGATTCATGCTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: SPSQLIEKEKGGRKKEREWDSFL*IHADDF
Trigger: AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCA...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATTGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCAATGAAAACCGAAACTaGAGAAATACAGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPNENRN*RNTALE
Trigger: TTCCAGGGCTGTATTTCTGCAGTTTCGGTTTTCATT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGATACTAAATAGCAGCTaGCTCTGCAAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRILNSS*LCKSCV
Trigger: TACACAACTCTTGCAGAGGCAGCTGCTATTTAGTAT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAAAGTGTTGTTTTGGCCTaGTGTTCATTGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKSVVLA*CSLASS
Trigger: GCTAGAAGCCAATGAACAGCAGGCCAAAACAACACT...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTCTCGGATAGCTGTAAATGGGACTCCTTCCTCTGCATTCATGCTGATGACTTTGGTGAAATGAAGTCATaGAACATGATGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: FSDSCKWDSFLCIHADDFGEMKS*NMMLLL
Trigger: TAAAAGAAGCATCATGTTCCATGACTTCATTTCACC...AAAGTCATCAGCATGAATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQITVTP*PFTLEL
Trigger: AAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGAT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTCGGATAGCTGTAAATaGGACTCCTTCCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYSDSCK*DSFLCI
Trigger: AATGCAGAGGAAGGAGTCCCATTTACAGCTATCCGA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TCCCAGGTTCACAATTTGCATAAATCTGGGGTGCTCAAAATATCTCACAATTTAAGTGTCTCTTTGGTGTaGATTATGTCATGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SQVHNLHKSGVLKISHNLSVSLV*IMSCRS
Trigger: GCTCCTGCATGACATAATCCACACCAAAGAGACACT...TAAATTGTGAGATATTTTGAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTATATACAGAGGTCTCTaGTTTCTAGGCTGCTACATT +
Preference number: 4 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFIYRGL*FLGCYI
Trigger: AATGTAGCAGCCTAGAAACCAGAGACCTCTGTATAT...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGATATACAGAGGTCTCTaGTTTCTAGGCTGCTACATT +
Preference number: 4 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRIYRGL*FLGCYI
Trigger: AATGTAGCAGCCTAGAAACCAGAGACCTCTGTATAT...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCTTCCATCTCAGACATTaGGGGATAGTTACTATTTTT +
Preference number: 4 (lower is better)
Translates to: LFNISTIKPALRFPITVAFHLRH*GIVTIF
Trigger: AAAAATAGTAACTATCCCCCAATGTCTGAGATGGAA...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGTTCCATCTCAGACATTaGGGGATAGTTACTATTTTT +
Preference number: 4 (lower is better)
Translates to: IAAASARVVYSLNSIGVRFHLRH*GIVTIF
Trigger: AAAAATAGTAACTATCCCCCAATGTCTGAGATGGAA...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACATCCCACTACTGTTGTaGGAACTCTTTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNIPLLL*ELFVLM
Trigger: CATCAATACAAAGAGTTCCCACAACAGTAGTGGGAT...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp GTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGCAGGAGCACAATATTG +
Preference number: 4 (lower is better)
Translates to: VCMYSKTNVSVS*VWIMSCRSTIL
Trigger: CAATATTGTGCTCCTGCATGACATAATCCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR TCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCCAGGAAACAAAGGTTaGCCCTGGAACATTTCAATA +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYPGNKG*PWNISI
Trigger: TATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACATGGGCCAGGTCTGTGTaGATGTATTCAAAAACGAAT +
Preference number: 4 (lower is better)
Translates to: LNKHHDLSTYICSITQPTWARSV*MYSKTN
Trigger: ATTCGTTTTTGAATACATGCACACAGACCTGGCCCA...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGCCTTCTGTTATTACTaGACCAAAAGCATAAAATGC +
Preference number: 4 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKAFCYY*TKSIKC
Trigger: GCATTTTATGCTTTTGGTGCAGTAATAACAGAAGGC...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR GCA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCACATCTTTGGAACTCTaGTCCCAACTACTTATTCAA +
Preference number: 4 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPTSLEL*SQLLIQ
Trigger: TTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCCTTAAATTACATCTTTaGAACTCTGCTCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFLKLHL*NSAPNY
Trigger: GTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAG...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp AAGTATAATCTGTACACAGCTGTTCCAAAGTCATTATaGGAGAATCTTGGAATTAGACGGGACATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KYNLYTAVPKSL*ENLGIRRDIGG
Trigger: ACCTCCAATGTCCCGTCTAATTCCAAGATTCTCCAATAATGACTTTGGAACAGCTGTGTACAGATTATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATAATGAAAACCGAAACTaGAGAAATACAGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYNENRN*RNTALE
Trigger: TTCCAGGGCTGTATTTCTGCAGTTTCGGTTTTCATT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR GCA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAATTCCCCATCACTGTTaGCATCATCACAGACAATTA +
Preference number: 4 (lower is better)
Translates to: LNKHHDLSTYICSITQPTIPHHC*HHHRQL
Trigger: TAATTGTCTGTGATGATGGCAACAGTGATGGGGAAT...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGGGTGAAATGAAGTCATaGAACATGATGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQGEMKS*NMMLLL
Trigger: TAAAAGAAGCATCATGTTCCATGACTTCATTTCACC...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGGTGAAATGAAGTCATaGAACATGATGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKGEMKS*NMMLLL
Trigger: TAAAAGAAGCATCATGTTCCATGACTTCATTTCACC...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACGGTGAAATGAAGTCATaGAACATGATGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNGEMKS*NMMLLL
Trigger: TAAAAGAAGCATCATGTTCCATGACTTCATTTCACC...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATATCCCACTACTGTTGTaGGAACTCTTTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYIPLLL*ELFVLM
Trigger: CATCAATACAAAGAGTTCCCACAACAGTAGTGGGAT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp CAAATAGGCTGGAAAGGGGAGCCATCATACCATTTGTaGATATGCATAAGACATTTTCACACGGATATTATA +
Preference number: 4 (lower is better)
Translates to: QIGWKGEPSYHL*ICIRHFHTDII
Trigger: TATAATATCCGTGTGAAAATGTCTTATGCATATCAACAAATGGTATGATGGCTCCCCTTTCCAGCCTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CCA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGTGAAATGAAGTCATaGAACATGATGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYGEMKS*NMMLLL
Trigger: TAAAAGAAGCATCATGTTCCATGACTTCATTTCACC...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
3UTR CAA 72 bp ACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTaGTCAAATGCCTTACTAAAATCAGATACTTACTCA +
Preference number: 4 (lower is better)
Translates to: TLFHLSGIAGQS*SNALLKSDTYS
Trigger: TGAGTAAGTATCTGATTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS TCA 90 bp GGTCTCAGGCTGACTCCTCCGACAGCTGTGTGCCTCGCCTCCCTCTaGACAATGGTAGCAGCTGCATCCAGGCTGTACAGTCTTTGCACA +
Preference number: 5 (lower is better)
Translates to: GLRLTPPTAVCLASL*TMVAAASRLYSLCT
Trigger: TGTGCAAAGACTGTACAGCCTGGATGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCACACAGCTGTCGGAGGAGTCAGCCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS-3UTR CAA 90 bp CAGGTCCCTGTGAAGAACGTGTTGGTGGTGGATGTACGCCAGGCCCCGCAAAAGCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: QVPVKNVLVVDVRQAPQKRGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...CTTTTGCGGGGCCTGGCGTACATCCACCACCAACACGTTCTTCACAGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS TCA 90 bp TCTTTTAGGTCTGTTAGCTTGAACGCAGCCTCCGTGGTCTCAGGCTaGCTCCTCCGACAGCTGTGTGCCTCGCCTCCCTCTGAACAATGG +
Preference number: 5 (lower is better)
Translates to: SFRSVSLNAASVVSG*LLRQLCASPPSEQW
Trigger: CCATTGTTCAGAGGGAGGCGAGGCACACAGCTGTCGGAGGAGTCAGCCTGAGACCACGGAGGCTGCGTTCAAGCTAACAGACCTAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS-3UTR CAA 90 bp CCTTCGCCGGTAGAGGTGGTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCGCTGAGGTAGGACAATaGCTTGAGTTCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSPVEVVTRAKRASEVSSAEVGQ*LEFRRS
Trigger: TGACCTCCTGAACTCAAGCAATTGTCCTACCTCAGC...GGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGACCACCTCTACCGGCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp GTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCTCCTGTTCCAGACAACATTGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: VTRAKRASEVSSSCSRQHWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...ATGTTGTCTGGAACAGGAGGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS TCA 90 bp AAGACTCCTCATCAGGAAGCTGGTACAGCTGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTGCTTCCTGGGCGGAGACGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: KTPHQEAGTAEMAGR*NNHEQVLPGRRRGL
Trigger: GAGACCGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGGAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000460149.5
ENST00000466337.1
ENST00000652192.3
CDS TCA 90 bp TGCTTCACTCATCAGGAAGCTGGTACAGCTGAGATGGCAGGGCGCTaGAATAATCATGAACAAGTGCTTCCTGGGCGGAGACGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: CFTHQEAGTAEMAGR*NNHEQVLPGRRRGL
Trigger: GAGACCGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp GAAGTATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: EVSSCLGDSGMKSWDFPPRGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...CGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGATACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CCTTCGCCGGTAGAGGTGGTCACCAGGGCAAAGCGGGCAAGTGAAGTCTCTTCCAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: PSPVEVVTRAKRASEVSSSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...GGAAGAGACTTCACTTGCCCGCTTTGCCCTGGTGACCACCTCTACCGGCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp GTATGTCTGGCTGGGAATGGACTTGGCCCGGGCAAGACCAAAATCAGCCAGTTTGAAGTGGGCACTTCCTaGGTTTTCCTCCTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VCLAGNGLGPGKTKISQFEVGTS*VFLLPL
Trigger: GAGAGGCAGGAGGAAAACCAAGGAAGTGCCCACTTC...AAACTGGCTGATTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCAGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGGAGAAAACCCGCACTaGAACCTTTCCCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVGENPH*NLSPTA
Trigger: GGCAGTGGGGGAAAGGTTCAAGTGCGGGTTTTCTCC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGCTGGGCACGGGCAGCTaGAAGTCCCCTGGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: IAAASARVVYSLNSIGVRLGTGS*KSPGVK
Trigger: TTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAG...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGGACTGGGCACGGGCAGCTaGAAGTCCCCTGGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PGLCACIQKRMSVSLWCGLGTGS*KSPGVK
Trigger: TTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAG...TCCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGTGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp ATCCTCTTGCCTTGGGGACAGTGGCATGAAAAGCTGGGATTTCCCTCCGGCTTCCTTTCCACTTGGGCATaGCTTTTCCCAGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: ILLPWGQWHEKLGFPSGFLSTWA*LFPGSQ
Trigger: TTGTGAACCTGGGAAAAGCAATGCCCAAGTGGAAAG...GAAGCCGGAGGGAAATCCCAGCTTTTCATGCCACTGTCCCCAAGGCAAGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS CCA 90 bp ACCCTGCCTCAGATCCTCTTCCTGAAAACAATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTTCTGGGCACGGGCAGCTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TLPQILFLKTITVTP*PFTLELLGTGSLKS
Trigger: GGACTTCAAGCTGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGATTGTTTTCAGGAAGAGGATCTGAGGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000434439.1
ENST00000450471.6
ENST00000451080.5
ENST00000488419.1
ENST00000493754.5
ENST00000652192.3
CDS CCA 90 bp ATTATCGCAGCTGCTTCACTCATCAGGAAGCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATCATGAACAAGTGCTTCCTGGGCGGA +
Preference number: 5 (lower is better)
Translates to: IIAAASLIRKLVQLR*QGAEIIMNKCFLGG
Trigger: TCCGCCCAGGAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGTGAAGCAGCTGCGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CACATTGTCACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGCCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: HIVTKAHPQNLLRAPFHLPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...CAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGTGACAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp ACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGGGCATTGCTCAGGCTGTACAGTCTTaGCACACAGCTCTTGACCCA +
Preference number: 5 (lower is better)
Translates to: TKAHPQNLLRAPFHLGIAQAVQS*HTALDP
Trigger: TGGGTCAAGAGCTGTGTGCAAAGACTGTACAGCCTG...AGCAATGCCCAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGTTCCCTCCGGCTTCCTaGCCCCTCAAAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WGLVVLYLESHIPNRLERFPPAS*PLKSSS
Trigger: GCTGCTGCTTTTGAGGGGCAAGGAAGCCGGAGGGAA...CCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS TCA 90 bp TGCAAAACCTTCCACTCTGGTGACTCCTCATTAGCTTCCCGAGGCTaGCAGCATAATTATCGCAGCTGCTTCACTCATCAGGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CKTFHSGDSSLASRG*QHNYRSCFTHQEAG
Trigger: ACCAGCTTCCTGATGAGTGAAGCAGCTGCGATAATTATGCTGTCAGCCTCGGGAAGCTAATGAGGAGTCACCAGAGTGGAAGGTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS GCA 90 bp GTGCAAGAAACTCCACATCAGACAGGGATTGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCAGCTGTGGTCCTAGCAACTGGGAAG +
Preference number: 5 (lower is better)
Translates to: VQETPHQTGIACIQM*TTENEAAVVLATGK
Trigger: CTTCCCAGTTGCTAGGACCACAGCTGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTGATGTGGAGTTTCTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS GCA 90 bp TCATACAACCAAGCTGATGCCGACCCAGATGCAGACCTTAGCTTGTaGTCACAGCAAACACAGAGACTTGCTCAGAACTCATTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SYNQADADPDADLSL*SQQTQRLAQNSLSP
Trigger: TGGGCTCAATGAGTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGCACAAGCTAAGGTCTGCATCTGGGTCGGCATCAGCTTGGTTGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCTGGGCACGGGCAGCTaGAAGTCCCCTGGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPLGTGS*KSPGVK
Trigger: TTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCTGGGCACGGGCAGCTaGAAGTCCCCTGGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYLGTGS*KSPGVK
Trigger: TTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAG...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYISPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATCCAAACCATTTGGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGTCAAATCCAAACCATTaGGGGAACTTCTCTCGGGGA +
Preference number: 5 (lower is better)
Translates to: IQTIWGTSLGEKYPLALGSNPNH*GNFSRG
Trigger: TCCCCGAGAGAAGTTCCCCAAATGGTTTGGATTTGA...CCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCCTGGACAGAAGCGATTaGAGTTTCCCTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVLDRSD*SFPGCF
Trigger: AAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCAG...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: IAAASARVVYSLNSIGVRRGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: LFNISTIKPALRFPITVARGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTTGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AGCACAATATTGGCATGTTTCAAACCCTTCAGGAGAGAAGCTTCTCGGATAGCTCCTCTGCAACCATCTTaGCTGATTCCTCCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: STILACFKPFRREASRIAPLQPS*LIPPPL
Trigger: CAGGGGAGGAGGAATCAGCAAAGATGGTTGCAGAGG...AGCTATCCGAGAAGCTTCTCTCCTGAAGGGTTTGAAACATGCCAATATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp TGCACCCCATATGTCCAGCTCAGAGGAATATTCAGTGGCTCCCAGCAAAGCATCATCATGCCACCCTTTTaGAAAGCCTCCTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: CTPYVQLRGIFSGSQQSIIMPPF*KASLIL
Trigger: CAGAATCAAGGAGGCTTTCAAAAAGGGTGGCATGAT...GATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATGGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp CTTGCTGATGCGTCAACAGTAGCATCCCTGAGCTTTCGATTGGTACTAGCATTACAGGCTGTACAGTCTTaGCACACAGCTCTTGACCCA +
Preference number: 5 (lower is better)
Translates to: LADASTVASLSFRLVLALQAVQS*HTALDP
Trigger: TGGGTCAAGAGCTGTGTGCAAAGACTGTACAGCCTG...TAATGCTAGTACCAATCGAAAGCTCAGGGATGCTACTGTTGACGCATCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAGGTCTGTTAGCTaGAACGCAGCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCFRSVS*NAASVV
Trigger: GACCACGGAGGCTGCGTTCAAGCTAACAGACCTAAA...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ACCAAAGCACATCCGCAAAATTTACTCAGGGCCCCTTTCCACTTGGGCATTGCTTCCCAGGTTCACAATTaGCATAAATCTGGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: TKAHPQNLLRAPFHLGIASQVHN*HKSGVL
Trigger: GAGCACCCCAGATTTATGCAAATTGTGAACCTGGGA...AGCAATGCCCAAGTGGAAAGGGGCCCTGAGTAAATTTTGCGGATGTGCTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGAGGCAGCAGCCACATaGTCACCAAAGCACATCCGC +
Preference number: 5 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKEAAAT*SPKHIR
Trigger: GCGGATGTGCTTTGGTGACAATGTGGCTGCTGCCTC...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CTGCTCCATCACCCAGCCTACACTGTTTCATCTTTCAGGTATAGCTGGACAGTCGAATTAGACGGGACATaGGAGGTCAGCTCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: LLHHPAYTVSSFRYSWTVELDGT*EVSSSN
Trigger: GTTAGAAGAGCTGACCTCCAATGTCCCGTCTAATTC...GACTGTCCAGCTATACCTGAAAGATGAAACAGTGTAGGCTGGGTGATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAACTGGGCACGGGCAGCTaGAAGTCCCCTGGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SPSQLIEKEKGGRKKERELGTGS*KSPGVK
Trigger: TTTCACCCCAGGGGACTTCAAGCTGCCCGTGCCCAG...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFRGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TGCACCCCATATGTCCAGCTCAGAGGAATATTCAGTGGCTCCCAGCAAAGCATCAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 5 (lower is better)
Translates to: CTPYVQLRGIFSGSQQSINVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...GATGCTTTGCTGGGAGCCACTGAATATTCCTCTGAGCTGGACATATGGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTCCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAACATGAAAAGTCTGACATTATGAGGATGAAGCCCTCCTGGATGCTGAGACATCCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: KHEKSDIMRMKPSWMLRHPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...ATGTCTCAGCATCCAGGAGGGCTTCATCCTCATAATGTCAGACTTTTCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCCTCTGCAACCATCTTaGCTGATTCCTCCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFPLQPS*LIPPPL
Trigger: CAGGGGAGGAGGAATCAGCAAAGATGGTTGCAGAGG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CAA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGATTTAGGTCTGTTAGCTaGAACGCAGCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: GLVVLYLESHIPNRLERGFRSVS*NAASVV
Trigger: GACCACGGAGGCTGCGTTCAAGCTAACAGACCTAAA...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCAGGCAGGTTGATTaGGGCTACCCATGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCLRQVD*GYPCVF
Trigger: AAAGACACATGGGTAGCCCAAATCAACCTGCCTGAG...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS TCA 90 bp TTAGCTTGTGCTCACAGCAAACACAGAGACTTGCTCAGAACTCATTaGGCCCAAAGCAGAATAGCTCTTTATCATCCCAGTGGGGACAAG +
Preference number: 5 (lower is better)
Translates to: LACAHSKHRDLLRTH*AQSRIALYHPSGDK
Trigger: CTTGTCCCCACTGGGATGATAAAGAGCTATTCTGCTTTGGGCTCAATGAGTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGCACAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS GCA 90 bp GTGCAAGAAACTCCACATCAGACAGGGATTGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCAGCTTGCTTTACTCTTTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VQETPHQTGIACIQM*TTENEAACFTLWWH
Trigger: ATGCCACCAAAGAGTAAAGCAAGCTGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTGATGTGGAGTTTCTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410091.7
ENST00000493754.5
CDS GCA 90 bp CAAAATGAGACATTCCTAGAACAAGGCTGCATTGCTGCAGTACGATaGTGTCCGATGTCAGTATGCCATCCATGCTGTTTCTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: QNETFLEQGCIAAVR*CPMSVCHPCCFLLP
Trigger: TGGAAGCAAGAAACAGCATGGATGGCATACTGACATCGGACAGCATCGTACTGCAGCAATGCAGCCTTGTTCTAGGAATGTCTCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATTGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTATTCAATATCTCCACCATCAAACCAGCGCTTAGATTCCCCATCACTGTTGCCCTGGACAGAAGCGATTaGAGTTTCCCTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LFNISTIKPALRFPITVALDRSD*SFPGCF
Trigger: AAAGCAGCCAGGGAAACTCAAATCGCTTCTGTCCAG...GGCAACAGTGATGGGGAATCTAAGCGCTGGTTTGATGGTGGAGATATTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS TCA 90 bp AACTCCACATCAGACAGGGATTGCTTGCATTCAGATGTGCACAACTaGAAACGAGGCAGCTTGCTTTACTCTTTGGTGGCATTTAACACC +
Preference number: 5 (lower is better)
Translates to: NSTSDRDCLHSDVHN*KRGSLLYSLVAFNT
Trigger: GGTGTTAAATGCCACCAAAGAGTAAAGCAAGCTGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTGATGTGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410091.7
ENST00000493754.5
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACATGGCTGGGAATGGACTaGGCCCGGGCAAGACCAAAA +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTWLGMD*ARARPK
Trigger: TTTTGGTCTTGCCCGGGCCAAGTCCATTCCCAGCCA...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFSPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATCCAAACCATTTGGGGAACTTCTCTCGGGGAGAAGTATCCTCTTGCCTTGGGGCTCGTTGTCTTGTATTaGGAATCGCATATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: IQTIWGTSLGEKYPLALGLVVLY*ESHIPN
Trigger: ATTTGGAATATGCGATTCCAAATACAAGACAACGAG...CCCCAAGGCAAGAGGATACTTCTCCCCGAGAGAAGTTCCCCAAATGGTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CTGCCAGACTCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAAGGGAAGAAATAAACTaGCCAGCTCTGCCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: LPDSPSQLIEKEKGGRKKREEIN*PALPRL
Trigger: CAGGCGAGGCAGAGCTGGCAAGTTTATTTCTTCCCT...TTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGAGTCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAGGAGAAAACCCGCACTaGAACCTTTCCCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTGENPH*NLSPTA
Trigger: GGCAGTGGGGGAAAGGTTCAAGTGCGGGTTTTCTCC...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATCCCACTACTGTaGTGGGAACTCTTTGTATTG +
Preference number: 5 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCGIPLL*WELFVL
Trigger: CAATACAAAGAGTTCCCACAACAGTAGTGGGATTCC...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCGTGGCCTTTTACTCTaGAACTTCTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYRGLLL*NFWARA
Trigger: TGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGTGCAGGAGCACAATATaGGCATGTTTCAAACCCTTC +
Preference number: 5 (lower is better)
Translates to: IAAASARVVYSLNSIGVRCRSTI*ACFKPF
Trigger: GAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCA...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CCAGGTCTGTGTGCATGTATTCAAAAACGAATGTCAGTGTCTCTTTGGTGTGGATGCAGGAGCACAATATaGGCATGTTTCAAACCCTTC +
Preference number: 5 (lower is better)
Translates to: PGLCACIQKRMSVSLWCGCRSTI*ACFKPF
Trigger: GAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCA...TCCACACCAAAGAGACACTGACATTCGTTTTTGAATACATGCACACAGACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAACCTGTGAAGAACGTGTaGGTGGTGGATGTACGCCAG +
Preference number: 5 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKPVKNV*VVDVRQ
Trigger: CTGGCGTACATCCACCACCAACACGTTCTTCACAGG...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: WGLVVLYLESHIPNRLERSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...CCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCTTTTCACCAGCATTaGCTAAACTGGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFSFHQH*LNWAGW
Trigger: CCACCCAGCCCAGTTTAGCAAATGCTGGTGAAAAGA...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGAAGTGGGCACTTCCTaGGTTTTCCTCCTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYEVGTS*VFLLPL
Trigger: GAGAGGCAGGAGGAAAACCAAGGAAGTGCCCACTTC...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CAA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGACTTTGCACACAGCTCTaGACCCATAATCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: GLVVLYLESHIPNRLERGLCTQL*THNLVG
Trigger: ACCTACAAGATTATGGGTCAAGAGCTGTGTGCAAAG...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGGCTGTACAGTCTTaGCACACAGCTCTTGACCCA +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVQAVQS*HTALDP
Trigger: TGGGTCAAGAGCTGTGTGCAAAGACTGTACAGCCTG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCTGGCAGAACATGCTGGGAAGGCAACCGGTTAATCAAAAGGATTCCAATTTGGTGGGGTCTCGTTGTCTaGTATTTGGAATCGCATATT +
Preference number: 5 (lower is better)
Translates to: SGRTCWEGNRLIKRIPIWWGLVV*YLESHI
Trigger: AATATGCGATTCCAAATACAAGACAACGAGACCCCA...CCAAATTGGAATCCTTTTGATTAACCGGTTGCCTTCCCAGCATGTTCTGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGCAACAGGGCTTAAATTACATCCCTCAGGAAGTCCTTTaGTTAACAATGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVVVQQGLNYIPQEVL*LTMLSK
Trigger: CTTGGATAACATTGTTAACAAAAGGACTTCCTGAGG...GATGTAATTTAAGCCCTGTTGCACCACCACACACACACACACACACACACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCTCAGGCAGGTTGATTaGGGCTACCCATGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPLRQVD*GYPCVF
Trigger: AAAGACACATGGGTAGCCCAAATCAACCTGCCTGAG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACTTGGCCTGCTGTTCATaGGCTTCTAGCAAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNLACCS*ASSKVS
Trigger: AGACACCTTGCTAGAAGCCAATGAACAGCAGGCCAA...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATAGCAGCTGCCTCTGCAAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGTCCCTGAGCTTTCGATaGGTACTAGCATTATCTCTG +
Preference number: 5 (lower is better)
Translates to: IAAASARVVYSLNSIGVRSLSFR*VLALSL
Trigger: CAGAGATAATGCTAGTACCAATCGAAAGCTCAGGGA...CCTGACACCTATCGAATTTAGAGAATACACAACTCTTGCAGAGGCAGCTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTGAATTAGACGGGACATaGGAGGTCAGCTCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFELDGT*EVSSSN
Trigger: GTTAGAAGAGCTGACCTCCAATGTCCCGTCTAATTC...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCTGGGGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAATGCAGGAGCACAATATaGGCATGTTTCAAACCCTTC +
Preference number: 5 (lower is better)
Translates to: SGVSLSCIWNRIFQIGWKCRSTI*ACFKPF
Trigger: GAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCA...TTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp GGTCTCGTTGTCTTGTATTTGGAATCGCATATTCCAAATAGGCTGGAAAGGGGAAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 5 (lower is better)
Translates to: GLVVLYLESHIPNRLERGNVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...TCCCCTTTCCAGCCTATTTGGAATATGCGATTCCAAATACAAGACAACGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTCCCAGGAAACAAAGGTaGACCCTGGAACATTTCAAT +
Preference number: 5 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFPRKQR*TLEHFN
Trigger: ATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGG...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTTCTTTTCACCAGCATTaGCTAAACTGGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVSFHQH*LNWAGW
Trigger: CCACCCAGCCCAGTTTAGCAAATGCTGGTGAAAAGA...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATAGCCCTGGAAGAACCTaGGTGATCTCGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYSPGRT*VISPFL
Trigger: AAGAAAGGGCGAGATCACCAAGGTTCTTCCAGGGCT...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACATTTAGGTCTGTTAGCTaGAACGCAGCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTFRSVS*NAASVV
Trigger: GACCACGGAGGCTGCGTTCAAGCTAACAGACCTAAA...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTGATTCCCCATCACTGTaGCCATCATCACAGACAATT +
Preference number: 5 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFDSPSL*PSSQTI
Trigger: AATTGTCTGTGATGATGGCAACAGTGATGGGGAATC...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GCAACAGGGCTTAAATTACATCTTTGGAACTCTGCTCCCAACTACTTATTCAATTTGGCCTGCTGTTCATaGGCTTCTAGCAAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ATGLKLHLWNSAPNYLFNLACCS*ASSKVS
Trigger: AGACACCTTGCTAGAAGCCAATGAACAGCAGGCCAA...ATTGAATAAGTAGTTGGGAGCAGAGTTCCAAAGATGTAATTTAAGCCCTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATGGAGTTAGATTTGGAATCCCACTACTGTaGTGGGAACTCTTTGTATTG +
Preference number: 5 (lower is better)
Translates to: FQVIGEDIKPLVQYGVRFGIPLL*WELFVL
Trigger: CAATACAAAGAGTTCCCACAACAGTAGTGGGATTCC...AAATCTAACTCCATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTTGTTCTCTCCCTTTTaGCCAGAGGTCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYLFSPF*PEVSSV
Trigger: CACGCTGCTGACCTCTGGCAAAAAGGGAGAGAACAA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652192.3
CDS-3UTR CAA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCCAGGAAACAAAGGTaGACCCTGGAACATTTCAAT +
Preference number: 5 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYPRKQR*TLEHFN
Trigger: ATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGG...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ACTCCTTCCTCTGCATTCATGCTGATGACTTTTAAAGCCACTAGTTGTCCATTTCCCAGGAAACAAAGGTaGACCCTGGAACATTTCAAT +
Preference number: 5 (lower is better)
Translates to: TPSSAFMLMTFKATSCPFPRKQR*TLEHFN
Trigger: ATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGG...AAATGGACAACTAGTGGCTTTAAAAGTCATCAGCATGAATGCAGAGGAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS-3UTR CAA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTCTTTTCACCAGCATTaGCTAAACTGGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYSFHQH*LNWAGW
Trigger: CCACCCAGCCCAGTTTAGCAAATGCTGGTGAAAAGA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGGATCTCTCATTTTACTaGAGGGGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRDLSFY*RGVCVC
Trigger: ACACACACACACACCCCTCAAGTAAAATGAGAGATC...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCGATCTCTCATTTTACTaGAGGGGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFDLSFY*RGVCVC
Trigger: ACACACACACACACCCCTCAAGTAAAATGAGAGATC...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAACTTACTCAGGCAGGTaGATTTGGGCTACCCATGTG +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTTYSGR*IWATHV
Trigger: CACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGT...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GATCTCTCATTTTACTTGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTAGCAAGGTGTCTTTaGAATCATGATCCAATACTA +
Preference number: 5 (lower is better)
Translates to: DLSFYLRGVCVCVCVCVCLARCL*NHDPIL
Trigger: TAGTATTGGATCATGATTCAAAAGACACCTTGCTAG...ACACACACACACACACACACACACACACACACCCCTCAAGTAAAATGAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ACTACTGTTGTGGGAACTCTTTGTATTGATGGACAGGTAAAACTGCTCAAGAACCAAGTAAGTGTTGTTTaGGCCTGCTGTTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: TTVVGTLCIDGQVKLLKNQVSVV*ACCSLA
Trigger: AGCCAATGAACAGCAGGCCAAAACAACACTTACTTG...GTTCTTGAGCAGTTTTACCTGTCCATCAATACAAAGAGTTCCCACAACAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGAGTTGTGTATTCTCTAAATTCGATAGGTGTCAGGAACATTGGAGAACCAGGCAAGTAAGTGTTGTTTaGGCCTGCTGTTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: KSCVFSKFDRCQEHWRTRQVSVV*ACCSLA
Trigger: AGCCAATGAACAGCAGGCCAAAACAACACTTACTTG...CCTGGTTCTCCAATGTTCCTGACACCTATCGAATTTAGAGAATACACAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACTCCCTGAGCTTTCGATaGGTACTAGCATTATCTCTG +
Preference number: 5 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYSLSFR*VLALSL
Trigger: CAGAGATAATGCTAGTACCAATCGAAAGCTCAGGGA...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CAGATGAAATTTGATGCAAGTAAGTGTTGTTTTGGCCTGCTGTTCATTGGCTTCAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 5 (lower is better)
Translates to: QMKFDASKCCFGLLFIGFNVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...GAAGCCAATGAACAGCAGGCCAAAACAACACTTACTTGCATCAAATTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTATCATGCCACCCTTTTaGAAAGCCTCCTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVIMPPF*KASLIL
Trigger: CAGAATCAAGGAGGCTTTCAAAAAGGGTGGCATGAT...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410091.7
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATTGCAGGAGCACAATATaGGCATGTTTCAAACCCTTC +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYCRSTI*ACFKPF
Trigger: GAAGGGTTTGAAACATGCCAATATTGTGCTCCTGCA...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVNVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCCCAGGAAACAAAGGTaGACCCTGGAACATTTCAAT +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYPRKQR*TLEHFN
Trigger: ATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCTCCTTCCCAACTCATAGAAAAAGAAAAAGGAGGAAGAAAGAAAGAAAGGGAACCCAGGAAACAAAGGTaGACCCTGGAACATTTCAAT +
Preference number: 5 (lower is better)
Translates to: SPSQLIEKEKGGRKKEREPRKQR*TLEHFN
Trigger: ATTGAAATGTTCCAGGGTCAACCTTTGTTTCCTGGG...TTCCCTTTCTTTCTTTCTTCCTCCTTTTTCTTTTTCTATGAGTTGGGAAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACAAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAAAGCTGTTCAAGGATGTaGGAAACCCCAGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKSCSRM*ETPGNK
Trigger: TTTGTTTCCTGGGGTTTCCAACATCCTTGAACAGCT...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGTATCTTTGCACACAGCTCTaGACCCATAATCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: IFKLFQVIGEDIKPLVQYLCTQL*THNLVG
Trigger: ACCTACAAGATTATGGGTCAAGAGCTGTGTGCAAAG...ATACTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TTAAATAAACACCATGATTTGAGTACATATATCTGCTCCATCACCCAGCCTACACTTTGCACACAGCTCTaGACCCATAATCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: LNKHHDLSTYICSITQPTLCTQL*THNLVG
Trigger: ACCTACAAGATTATGGGTCAAGAGCTGTGTGCAAAG...TGTAGGCTGGGTGATGGAGCAGATATATGTACTCAAATCATGGTGTTTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCCTCTTATCTGTCTTTTaGGGAAATCAACCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPLLSVF*GNQPSS
Trigger: GCTAGAAGGTTGATTTCCCAAAAAGACAGATAAGAG...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp TCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTCCTTTATAGCTGGACAGTCTTaGTCAAATGCCTTACTAAAA +
Preference number: 5 (lower is better)
Translates to: SDTYSGRLIWATHVSFSFIAGQS*SNALLK
Trigger: TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTAT...AAAGGAAAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTGTTTCATCTTTCAGGTATAGCTGGACAGTCTTTGTCAAATGCCTTACTAAAAAATGTCAGTGTCTCTTaGGTGTGGATTATGTCATGC +
Preference number: 5 (lower is better)
Translates to: LFHLSGIAGQSLSNALLKNVSVS*VWIMSC
Trigger: GCATGACATAATCCACACCAAAGAGACACTGACATT...TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTATACCTGAAAGATGAAACAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp ACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCAGAGTATGGAGTTAGATTaGAAGCTTCTTAGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: TIFKLFQVIGEDIKPLVQSMELD*KLLSKL
Trigger: CAGCTTACTAAGAAGCTTCAAATCTAACTCCATACT...CTGAACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTAGTATGGAGTTAGATTaGAAGCTTCTTAGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFSMELD*KLLSKL
Trigger: CAGCTTACTAAGAAGCTTCAAATCTAACTCCATACT...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCAGTATGGAGTTAGATTaGAAGCTTCTTAGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPSMELD*KLLSKL
Trigger: CAGCTTACTAAGAAGCTTCAAATCTAACTCCATACT...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTCCTCAGGAAGTCCTTTaGTTAACAATGTTATCCAAG +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVPQEVL*LTMLSK
Trigger: CTTGGATAACATTGTTAACAAAAGGACTTCCTGAGG...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACTTAATTAGTTCCTCCTaGCTCTTCCAAAGGATATAC +
Preference number: 5 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYLISSS*LFQRIY
Trigger: GTATATCCTTTGGAAGAGCAAGGAGGAACTAATTAA...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTTTAATTAGTTCCTCCTaGCTCTTCCAAAGGATATAC +
Preference number: 5 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFLISSS*LFQRIY
Trigger: GTATATCCTTTGGAAGAGCAAGGAGGAACTAATTAA...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp AAGCTTCTTAGTAAGCTGAAGCAAATGAAAACCGAAACTGCAGAAATACAGCCCTTTCCATCTCAGACATaGGGGGATAGTTACTATTTT +
Preference number: 5 (lower is better)
Translates to: KLLSKLKQMKTETAEIQPFPSQT*GDSYYF
Trigger: AAAATAGTAACTATCCCCCAATGTCTGAGATGGAAA...GGGCTGTATTTCTGCAGTTTCGGTTTTCATTTGCTTCAGCTTACTAAGAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp GTCAAATGCCTTACTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACATAGCTGGACAGTCTTaGTCAAATGCCTTACTAAAA +
Preference number: 5 (lower is better)
Translates to: VKCLTKIRYLLRQVDLGYIAGQS*SNALLK
Trigger: TTTTAGTAAGGCATTTGACAAAGACTGTCCAGCTAT...GTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAGTAAGGCATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS-3UTR CAA 90 bp CTAAAATCAGATACTTACTCAGGCAGGTTGATTTGGGCTACCCATGTGTCTTTTCTAGCAAGGTGTCTTTaGAATCATGATCCAATACTA +
Preference number: 5 (lower is better)
Translates to: LKSDTYSGRLIWATHVSFLARCL*NHDPIL
Trigger: TAGTATTGGATCATGATTCAAAAGACACCTTGCTAG...AAAAGACACATGGGTAGCCCAAATCAACCTGCCTGAGTAAGTATCTGATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS TCA 90 bp TATTTTTCAGACTCATCCTGCAAAATGAGACAGAGGGATACAACATaGTTAATGAAAGGAGAACAAGGTTTGGATGCAGATTTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: YFSDSSCKMRQRDTT*LMKGEQGLDADFSH
Trigger: ATGGCTGAAATCTGCATCCAAACCTTGTTCTCCTTTCATTAATCATGTTGTATCCCTCTGTCTCATTTTGCAGGATGAGTCTGAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS-3UTR CAA 90 bp AACACCATATTTAAACTATTCCAGGTCATAGGTGAGGACATAAAGCCCCTTGTTTTTCCATCTCAGACATaGGGGGATAGTTACTATTTT +
Preference number: 5 (lower is better)
Translates to: NTIFKLFQVIGEDIKPLVFPSQT*GDSYYF
Trigger: AAAATAGTAACTATCCCCCAATGTCTGAGATGGAAA...AACAAGGGGCTTTATGTCCTCACCTATGACCTGGAATAGTTTAAATATGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450471.6
ENST00000652192.3
CDS TCA 72 bp CTGACTCCTCCGACAGCTGTGTGCCTCGCCTCCCTCTaGACAATGGTAGCAGCTGCATCCAGGCTGTACAGT +
Preference number: 6 (lower is better)
Translates to: LTPPTAVCLASL*TMVAAASRLYS
Trigger: ACTGTACAGCCTGGATGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCACACAGCTGTCGGAGGAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS GCA 72 bp CTGAGATGGCAGGGCGCTGAAATAATCATGAACAAGTaGTTCCTGGGCGGAGACGCGGTCTCTGGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: LRWQGAEIIMNK*FLGGDAVSGKA
Trigger: GGCTTTCCCAGAGACCGCGTCTCCGCCCAGGAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000434439.1
ENST00000450471.6
ENST00000460149.5
ENST00000466337.1
ENST00000652192.3
CDS CCA 72 bp CATGAACAAGTGCTTCCTGGGCGGAGACGCGGTCTCTaGGAAAGCCTTTTAGCATCTGGGAGGCCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: HEQVLPGRRRGL*ESLLASGRPGL
Trigger: AAGACCTGGCCTCCCAGATGCTAAAAGGCTTTCCCAGAGACCGCGTCTCCGCCCAGGAAGCACTTGTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000434439.1
ENST00000450471.6
ENST00000460149.5
ENST00000466337.1
ENST00000652192.3
CDS TCA 72 bp AGAGCCTTCACCCAGCTTCTCCAAGTTCAAGTAAGATaGGGCTGCCCCAAAAGGGAGGCTCTTCCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: RAFTQLLQVQVR*GCPKREALPLL
Trigger: GAGCAGAGGAAGAGCCTCCCTTTTGGGGCAGCCTCATCTTACTTGAACTTGGAGAAGCTGGGTGAAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451080.5
ENST00000493754.5
CDS GCA 72 bp TGTGTGCCTCGCCTCCCTCTGAACAATGGTAGCAGCTaGATCCAGGCTGTACAGTCTTTGCACACAGCTCTT +
Preference number: 6 (lower is better)
Translates to: CVPRLPLNNGSS*IQAVQSLHTAL
Trigger: AAGAGCTGTGTGCAAAGACTGTACAGCCTGGATGCAGCTGCTACCATTGTTCAGAGGGAGGCGAGGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS CAA 72 bp GTGGTCCTAGCAACTGGGAAGGCTGAGGTAGGACAATaGCTTGAGTTCAGGAGGTCAAGGCTGCATAGAGCC +
Preference number: 6 (lower is better)
Translates to: VVLATGKAEVGQ*LEFRRSRLHRA
Trigger: GGCTCTATGCAGCCTTGACCTCCTGAACTCAAGCAATTGTCCTACCTCAGCCTTCCCAGTTGCTAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS CCA 72 bp CGCCCTTTCTTTTCACCAGCATTTGCTAAACTGGGCTaGGTGGTGACCTTTCTGGTAGGAGGCCAAAAGGTC +
Preference number: 6 (lower is better)
Translates to: RPFFSPAFAKLG*VVTFLVGGQKV
Trigger: GACCTTTTGGCCTCCTACCAGAAAGGTCACCACCCAGCCCAGTTTAGCAAATGCTGGTGAAAAGAAAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000450471.6
ENST00000460149.5
ENST00000466337.1
ENST00000652192.3
CDS GCA 72 bp CAAGCTGATGCCGACCCAGATGCAGACCTTAGCTTGTaGTCACAGCAAACACAGAGACTTGCTCAGAACTCA +
Preference number: 6 (lower is better)
Translates to: QADADPDADLSL*SQQTQRLAQNS
Trigger: TGAGTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGCACAAGCTAAGGTCTGCATCTGGGTCGGCATCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CAA 72 bp AACCAAGCTGATGCCGACCCAGATGCAGACCTTAGCTaGTGCTCACAGCAAACACAGAGACTTGCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: NQADADPDADLS*CSQQTQRLAQN
Trigger: GTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGCACAAGCTAAGGTCTGCATCTGGGTCGGCATCAGCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CAA 90 bp AGCTCATACAACCAAGCTGATGCCGACCCAGATGCAGACCTTAGCTaGTGCTCACAGCAAACACAGAGACTTGCTCAGAACTCATTGAGC +
Preference number: 6 (lower is better)
Translates to: SSYNQADADPDADLS*CSQQTQRLAQNSLS
Trigger: GCTCAATGAGTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGCACAAGCTAAGGTCTGCATCTGGGTCGGCATCAGCTTGGTTGTATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS TCA 72 bp TTCCACTCTGGTGACTCCTCATTAGCTTCCCGAGGCTaGCAGCATAATTATCGCAGCTGCTTCACTCATCAG +
Preference number: 6 (lower is better)
Translates to: FHSGDSSLASRG*QHNYRSCFTHQ
Trigger: CTGATGAGTGAAGCAGCTGCGATAATTATGCTGTCAGCCTCGGGAAGCTAATGAGGAGTCACCAGAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS TCA 72 bp TCAGACAGGGATTGCTTGCATTCAGATGTGCACAACTaGAAACGAGGCAGCTGTGGTCCTAGCAACTGGGAA +
Preference number: 6 (lower is better)
Translates to: SDRDCLHSDVHN*KRGSCGPSNWE
Trigger: TTCCCAGTTGCTAGGACCACAGCTGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451080.5
CDS GCA 72 bp TGCATTGCTGCAGTACGATGCTGTCCGATGTCAGTATaGCATCCATGCTGTTTCTTGCTTCCACCTGGATTG +
Preference number: 6 (lower is better)
Translates to: CIAAVRCCPMSV*HPCCFLLPPGL
Trigger: CAATCCAGGTGGAAGCAAGAAACAGCATGGATGGCATACTGACATCGGACAGCATCGTACTGCAGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CCA 72 bp CAGATCCTCTTCCTGAAAACAATCACTGTTACTCCGTaGCCTTTTACTCTTGAACTTCTGGGCACGGGCAGC +
Preference number: 6 (lower is better)
Translates to: QILFLKTITVTP*PFTLELLGTGS
Trigger: GCTGCCCGTGCCCAGAAGTTCAAGAGTAAAAGGCCACGGAGTAACAGTGATTGTTTTCAGGAAGAGGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000434439.1
ENST00000450471.6
ENST00000451080.5
ENST00000488419.1
ENST00000493754.5
ENST00000652192.3
CDS CCA 72 bp GCTGCTTCACTCATCAGGAAGCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATCATGAACAAGTGCTTC +
Preference number: 6 (lower is better)
Translates to: AASLIRKLVQLR*QGAEIIMNKCF
Trigger: GAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGTGAAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434439.1
CDS TCA 72 bp ATCATGCCACCCTTTTTGAAAGCCTCCTTGATTCTGTaGAGTGGGCACTTCCTTGGTTTTCCTCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: IMPPFLKASLIL*SGHFLGFPPAS
Trigger: AGAGGCAGGAGGAAAACCAAGGAAGTGCCCACTTCACAGAATCAAGGAGGCTTTCAAAAAGGGTGGCATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410091.7
ENST00000451080.5
ENST00000493754.5
CDS GCA 72 bp ACATTCCTAGAACAAGGCTGCATTGCTGCAGTACGATaGTGTCCGATGTCAGTATGCCATCCATGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: TFLEQGCIAAVR*CPMSVCHPCCF
Trigger: GAAACAGCATGGATGGCATACTGACATCGGACAGCATCGTACTGCAGCAATGCAGCCTTGTTCTAGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CCA 72 bp CAAAGACTCCTCATCAGGAAGCTGGTACAGCTGAGATaGCAGGGCGCTGAAATAATCATGAACAAGTGCTTC +
Preference number: 6 (lower is better)
Translates to: QRLLIRKLVQLR*QGAEIIMNKCF
Trigger: GAAGCACTTGTTCATGATTATTTCAGCGCCCTGCCATCTCAGCTGTACCAGCTTCCTGATGAGGAGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260967.6
ENST00000410091.7
ENST00000460149.5
ENST00000466337.1
ENST00000652192.3
CDS CAA 72 bp GCTGCATCCAGGCTGTACAGTCTTTGCACACAGCTCTaGACCCATAATCTTGTAGGTTCAAGGAGAAAACCC +
Preference number: 6 (lower is better)
Translates to: AASRLYSLCTQL*THNLVGSRRKP
Trigger: GGGTTTTCTCCTTGAACCTACAAGATTATGGGTCAAGAGCTGTGTGCAAAGACTGTACAGCCTGGATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS CAA 90 bp ATGGTAGCAGCTGCATCCAGGCTGTACAGTCTTTGCACACAGCTCTaGACCCATAATCTTGTAGGTTCAAGGAGAAAACCCGCACTTGAA +
Preference number: 6 (lower is better)
Translates to: MVAAASRLYSLCTQL*THNLVGSRRKPALE
Trigger: TTCAAGTGCGGGTTTTCTCCTTGAACCTACAAGATTATGGGTCAAGAGCTGTGTGCAAAGACTGTACAGCCTGGATGCAGCTGCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434439.1
ENST00000450471.6
ENST00000488419.1
ENST00000652192.3
CDS TCA 72 bp CGCAGTGAAGCTCTCACACTGGATTTAAGGTCAAAATaGGACATTCCTAGAACAAGGCTGCATTGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: RSEALTLDLRSK*DIPRTRLHCCS
Trigger: ACTGCAGCAATGCAGCCTTGTTCTAGGAATGTCTCATTTTGACCTTAAATCCAGTGTGAGAGCTTCACTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS TCA 72 bp GCTCACAGCAAACACAGAGACTTGCTCAGAACTCATTaGGCCCAAAGCAGAATAGCTCTTTATCATCCCAGT +
Preference number: 6 (lower is better)
Translates to: AHSKHRDLLRTH*AQSRIALYHPS
Trigger: ACTGGGATGATAAAGAGCTATTCTGCTTTGGGCTCAATGAGTTCTGAGCAAGTCTCTGTGTTTGCTGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS GCA 72 bp ACTCCACATCAGACAGGGATTGCTTGCATTCAGATGTaGACAACTGAAAACGAGGCAGCTTGCTTTACTCTT +
Preference number: 6 (lower is better)
Translates to: TPHQTGIACIQM*TTENEAACFTL
Trigger: AAGAGTAAAGCAAGCTGCCTCGTTTTCAGTTGTGCACATCTGAATGCAAGCAATCCCTGTCTGATGTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410091.7
ENST00000493754.5
CDS CCA 72 bp TCTGTAGAATCGGGCTACTCCACCCAGCATCGATCTTaGCAGGCAGTAATAGGATTAGCAATTGTGTATGTT +
Preference number: 6 (lower is better)
Translates to: SVESGYSTQHRS*QAVIGLAIVYV
Trigger: AACATACACAATTGCTAATCCTATTACTGCCTGCCAAGATCGATGCTGGGTGGAGTAGCCCGATTCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CAA 72 bp ATCTGTAGAATCGGGCTACTCCACCCAGCATCGATCTaGGCAGGCAGTAATAGGATTAGCAATTGTGTATGT +
Preference number: 6 (lower is better)
Translates to: ICRIGLLHPASI*AGSNRISNCVC
Trigger: ACATACACAATTGCTAATCCTATTACTGCCTGCCAAGATCGATGCTGGGTGGAGTAGCCCGATTCTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS TCA 72 bp GACTCATCCTGCAAAATGAGACAGAGGGATACAACATaGTTAATGAAAGGAGAACAAGGTTTGGATGCAGAT +
Preference number: 6 (lower is better)
Translates to: DSSCKMRQRDTT*LMKGEQGLDAD
Trigger: ATCTGCATCCAAACCTTGTTCTCCTTTCATTAATCATGTTGTATCCCTCTGTCTCATTTTGCAGGATGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS TCA 72 bp TCTTTTATCAATATCTTTCCCCTTAGTTCAACCCACTaGATAACTCCCTTGGCTAATAGCTCATACAACCAA +
Preference number: 6 (lower is better)
Translates to: SFINIFPLSSTH*ITPLANSSYNQ
Trigger: TTGGTTGTATGAGCTATTAGCCAAGGGAGTTATTCAGTGGGTTGAACTAAGGGGAAAGATATTGATAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488419.1
CDS CAA 72 bp TTCAGATGTGCACAACTGAAAACGAGGCAGCTGTTATaGAATAGAATAAAATTTGGCACAGTTAAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: FRCAQLKTRQLL*NRIKFGTVKVL
Trigger: AAGAACCTTAACTGTGCCAAATTTTATTCTATTCAATAACAGCTGCCTCGTTTTCAGTTGTGCACATCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260967.6