RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK14 (Homo sapiens)

Ensembl gene IDs: ENSG00000058091

Ensembl transcript IDs: ENST00000265741.7, ENST00000380050.8, ENST00000406263.5, ENST00000430760.5, ENST00000431029.5, ENST00000436577.3, ENST00000446224.5, ENST00000446790.5, ENST00000449528.5, ENST00000456689.5, ENST00000460493.1, ENST00000478540.1, ENST00000487145.1, ENST00000496279.5

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTaGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCA +
Preference number: 1 (lower is better)
Translates to: LAAVLLGILQRGLPH*EPACIRQPSLQIKA
Trigger: TGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR GCA 90 bp CTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGACATGCCT +
Preference number: 1 (lower is better)
Translates to: LLGILQRGLPHWEPA*IRQPSLQIKAKDMP
Trigger: AGGCATGTCTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR GCA 90 bp CGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGACATaGCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCT +
Preference number: 1 (lower is better)
Translates to: RPASGSPPSRSKQKT*LVHFSPVSHTRLHP
Trigger: AGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 90 bp CTGCCCACAAGGAGGGCAGAAGAGAAAAGAAGCAGAGGGAGAATATaGTTGCAAATAGGGGAAGGAGAGAGGGAGGGAGGGAGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: LPTRRAEEKRSRGRI*LQIGEGEREGGSER
Trigger: CCTCTCACTCCCTCCCTCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCTTCTGCCCTCCTTGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 90 bp CTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAA +
Preference number: 1 (lower is better)
Translates to: LHQAALPPDQSKRHA*STFLQCHILAFILQ
Trigger: TTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR GCA 90 bp TGGTGTATGAGAAAAGTACAAGGCAGTAACATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGAGATGGAAGTTATGCGCAATTATGC +
Preference number: 1 (lower is better)
Translates to: WCMRKVQGSNIYSFL*LQASKGDGSYAQLC
Trigger: GCATAATTGCGCATAACTTCCATCTCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATATGTTACTGCCTTGTACTTTTCTCATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 90 bp GTGAACACCAAATGTGTTGTCTTAATGTATTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTACAGAGACGCTGTGCTGCAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: VNTKCVVLMYLRHGW*KHKNLYRDAVLQRE
Trigger: TTCCCTCTGCAGCACAGCGTCTCTGTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAAATACATTAAGACAACACATTTGGTGTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 90 bp GTTGACAAGACCCAGACACAAAAAGTTACCTCAATCTCCAGAGGTTaGAATGTAAGCAATTTATCCCTGTCTTTGTTCTTAACGTTTGAT +
Preference number: 1 (lower is better)
Translates to: VDKTQTQKVTSISRG*NVSNLSLSLFLTFD
Trigger: ATCAAACGTTAAGAACAAAGACAGGGATAAATTGCTTACATTTCAACCTCTGGAGATTGAGGTAACTTTTTGTGTCTGGGTCTTGTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 90 bp CAGTGCTTTCTCAATAGAATAATAAATCTGCTAATCAACACAGTCTaGATTGATTTTCATGACTGCCCACAAGGAGGGCAGAAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: QCFLNRIINLLINTV*IDFHDCPQGGQKRK
Trigger: TTTTCTCTTCTGCCCTCCTTGTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGATTAGCAGATTTATTATTCTATTGAGAAAGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 90 bp CACATTGTTTTATGCCACTCTGTGGCTTTCAAGTTCAGACATTACTaGAGAAGTGTGAACACCAAATGTGTTGTCTTAATGTATTTAAGA +
Preference number: 1 (lower is better)
Translates to: HIVLCHSVAFKFRHY*RSVNTKCVVLMYLR
Trigger: TCTTAAATACATTAAGACAACACATTTGGTGTTCACACTTCTTCAGTAATGTCTGAACTTGAAAGCCACAGAGTGGCATAAAACAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: AAVLLGILQRGLPHWEPALTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 2 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 2 (lower is better)
Translates to: AAVLLGILQRGLPHWEPALRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 2 (lower is better)
Translates to: AAVLLGILQRGLPHWEPASSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: REKKQRENMIANRGRREGHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCAATTTTCTTGTAAGTaGAATCCACCACAGGGAGCG +
Preference number: 2 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPQFSCK*NPPQGA
Trigger: CGCTCCCTGTGGTGGATTTCACTTACAAGAAAATTG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 2 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCACACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPSKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 2 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCTGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CAA 90 bp CCTAGAAGGACATCTGGAGGTCTGTACCACAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGACCG +
Preference number: 2 (lower is better)
Translates to: PRRTSGGLYHKVTTS*EYVWLGTDFALARP
Trigger: CGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTACCTTGTGGTACAGACCTCCAGATGTCCTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
3UTR-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 2 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 2 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTTCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGGTCCCTCAACTCCTTaGGTAAGGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: REKKQRENMIANRGRREGGPSTP*VREAGP
Trigger: TGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGAACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: VTTSLEYVWLGTDFALARTPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...TCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
3UTR-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCCCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGGTCCCTCAACTCCTTaGGTAAGGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: SCLRQGDITLIALIEVFQGPSTP*VREAGP
Trigger: TGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGGTCCCTCAACTCCTTaGGTAAGGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFGPSTP*VREAGP
Trigger: TGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAACCTCCTGACCTTCTaGGAGGCATGTCTCTGTAAC +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWNLLTF*EACLCN
Trigger: GTTACAGAGACATGCCTCTCAGAAGGTCAGGAGGTT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 2 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGTTTCATGCTTTAGATaGAGTCTCCTAACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFVSCFR*SLLTVP
Trigger: GGGGACAGTTAGGAGACTTCATCTAAAGCATGAAAC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAACTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGATCTCCTTGGTATGGATaGTGTCATGAAGTAGCACTA +
Preference number: 2 (lower is better)
Translates to: VTTSLEYVWLGTDFALARSPWYG*CHEVAL
Trigger: TAGTGCTACTTCATGACATCATCCATACCAAGGAGA...TCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
3UTR-3UTR TCA 90 bp GTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGATGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 2 (lower is better)
Translates to: VTTSLEYVWLGTDFALARCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...TCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
3UTR-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTCAGAATACTGTGTGTaGAGTGATGTGCTAAGGTGT +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSEYCV*SDVLRC
Trigger: ACACCTTAGCACATCACTGCACACACAGTATTCTGA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAAGTCCTTGTCAACCTaGCTCCTAATTCCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFKSLST*LLIPSL
Trigger: AAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTTACAGAGACGCTGTaGTGCAGAGGGAAATCAAAC +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFFTETL*CRGKSN
Trigger: GTTTGATTTCCCTCTGCAGCACAGCGTCTCTGTAAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFSKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAGAGACACCAAACTTTaGATTTCCTGTATGGGTGGC +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFRDTKL*ISCMGG
Trigger: GCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 2 (lower is better)
Translates to: REKKQRENMIANRGRREGGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGTTTCATGCTTTAGATaGAGTCTCCTAACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAVSCFR*SLLTVP
Trigger: GGGGACAGTTAGGAGACTTCATCTAAAGCATGAAAC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATTTACAGAGACGCTGTaGTGCAGAGGGAAATCAAAC +
Preference number: 2 (lower is better)
Translates to: VREQGFALAENFLPSGCKFTETL*CRGKSN
Trigger: GTTTGATTTCCCTCTGCAGCACAGCGTCTCTGTAAA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 2 (lower is better)
Translates to: VREQGFALAENFLPSGCKGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWLRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: IPRGLTFFASLEVLLETFLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGATGGACAGCCACCCTaGTTTATGTACCCTATTTTT +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQADGQPP*FMYPIF
Trigger: AAAAATAGGGTACATAAAGCAGGGTGGCTGTCCATC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCACTTTCTAGTCACTCTTaGGAGGTAGAAATCGCTTCT +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQALSSHS*EVEIAS
Trigger: AGAAGCGATTTCTACCTCGCAAGAGTGACTAGAAAG...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTGGATCCAGTTTCCTTaGTGTATTGAGCTTGATTAT +
Preference number: 2 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWWIQFP*CIELDY
Trigger: ATAATCAAGCTCAATACACCAAGGAAACTGGATCCA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATTTGGATTTCCTGTATaGGTGGCAAGGATAGGTACT +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAFGFPV*VARIGT
Trigger: AGTACCTATCCTTGCCACCCATACAGGAAATCCAAA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFLRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGATCCTAAAACAGTATaGCACATTTCAAGCACTCAC +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFDPKTV*HISSTH
Trigger: GTGAGTGCTTGAAATGTGTCATACTGTTTTAGGATC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGATTTCTCCGTCCACTaGGTAATGTTATATTTCACT +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFDFSVH*VMLYFT
Trigger: AGTGAAATATAACATTACTCAGTGGACGGAGAAATC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGATTTCTCCGTCCACTaGGTAATGTTATATTTCACT +
Preference number: 2 (lower is better)
Translates to: REKKQRENMIANRGRREGDFSVH*VMLYFT
Trigger: AGTGAAATATAACATTACTCAGTGGACGGAGAAATC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTTTATGCCACTCTGTaGCTTTCAAGTTCAGACATT +
Preference number: 2 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFFYATL*LSSSDI
Trigger: AATGTCTGAACTTGAAAGCCACAGAGTGGCATAAAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFLRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: VREQGFALAENFLPSGCKITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 2 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 2 (lower is better)
Translates to: VREQGFALAENFLPSGCKSSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CAA 90 bp AATCTCCTTTCAGAATACTGTGTGTGCAGTGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTGTTTGAGTTCAGGCTATTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: NLLSEYCVCSDVLRC*YYSYHLFEFRLFLH
Trigger: ATGAAGGAATAGCCTGAACTCAAACAGATGGTAAGAATAGTACAAACACCTTAGCACATCACTGCACACACAGTATTCTGAAAGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: FALAENFLPSGCKMCTALITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAATCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: SCLRQGDITLIALIEVFQSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: LHSADSTILKFRNSGSSFLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQALKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 2 (lower is better)
Translates to: FALAENFLPSGCKMCTALSSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp GTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTaGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VLLGILQRGLPH*EPACIRQPSLQ
Trigger: CTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp GCAGCCCTCCCTCCAGATCAAAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGTCACATACTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: AALPPDQSKRHA*STFLQCHILAF
Trigger: GAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCTTTGATCTGGAGGGAGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAGGTCCCTCAACTCCTaGAGTAAGGGAAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: IPRGLTFFASLEVLLETFRSLNS*SKGSWP
Trigger: GGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCCAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAACAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: REKKQRENMIANRGRREGQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCTCCTAACTGTCCCCTaGGCCGCAGTACTACTGGGC +
Preference number: 3 (lower is better)
Translates to: LHSADSTILKFRNSGSSFLLTVP*AAVLLG
Trigger: GCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp TTGCGAGGTAGAAATCGCTTCTCACCCCAGAATCAGTaGATGGACAGCCACCCTGCTTTATGTACCCTATTT +
Preference number: 3 (lower is better)
Translates to: LRGRNRFSPQNQ*MDSHPALCTLF
Trigger: AAATAGGGTACATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGAGAAGCGATTTCTACCTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGAGAGACACCAAACTTaGGATTTCCTGTATGGGTGG +
Preference number: 3 (lower is better)
Translates to: IPRGLTFFASLEVLLETFERHQT*DFLYGW
Trigger: CCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp CCTCCAAGGTCCCTCAACTCCTTGAGTAAGGGAAGCTaGCCCATTCCCTTTTTCATCTTTAAAGCAAGATTC +
Preference number: 3 (lower is better)
Translates to: PPRSLNSLSKGS*PIPFFIFKARF
Trigger: GAATCTTGCTTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp AGAGAGAGAGAGACACCAAACTTTGGATTTCCTGTATaGGTGGCAAGGATAGGTACTCAAAACCTCCTGACC +
Preference number: 3 (lower is better)
Translates to: RERETPNFGFPV*VARIGTQNLLT
Trigger: GGTCAGGAGGTTTTGAGTACCTATCCTTGCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTCTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 3 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGAGAGACACCAAACTTaGGATTTCCTGTATGGGTGG +
Preference number: 3 (lower is better)
Translates to: REKKQRENMIANRGRREGERHQT*DFLYGW
Trigger: CCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 72 bp GTGGCAAGGATAGGTACTCAAAACCTCCTGACCTTCTaGGAGGCATGTCTCTGTAACAAAACAGATTTCTCC +
Preference number: 3 (lower is better)
Translates to: VARIGTQNLLTF*EACLCNKTDFS
Trigger: GGAGAAATCTGTTTTGTTACAGAGACATGCCTCTCAGAAGGTCAGGAGGTTTTGAGTACCTATCCTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CCA 72 bp GAAAGAAAGAGACAGAGAGAGAGAGACACCAAACTTTaGATTTCCTGTATGGGTGGCAAGGATAGGTACTCA +
Preference number: 3 (lower is better)
Translates to: ERKRQRERDTKL*ISCMGGKDRYS
Trigger: TGAGTACCTATCCTTGCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTCTCTCTCTGTCTCTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCCTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 3 (lower is better)
Translates to: IPRGLTFFASLEVLLETFLNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: REKKQRENMIANRGRREGVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR GCA 72 bp AGAAAAGTACAAGGCAGTAACATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGAGATGGAAGTTATGCG +
Preference number: 3 (lower is better)
Translates to: RKVQGSNIYSFL*LQASKGDGSYA
Trigger: CGCATAACTTCCATCTCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATATGTTACTGCCTTGTACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGTCATGCTATGTGGCTaGAAAATGCTAAGCAGAGTC +
Preference number: 3 (lower is better)
Translates to: SCLRQGDITLIALIEVFQVMLCG*KMLSRV
Trigger: GACTCTGCTTAGCATTTTCAAGCCACATAGCATGAC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATT +
Preference number: 3 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASQKKS*STWLLI
Trigger: AATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAAGACTTCCAGTGGGTaGGAATGTATGAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAKTSSG*ECMKEE
Trigger: TTCCTCTTTCATACATTCCAACCCACTGGAAGTCTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 3 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTG +
Preference number: 3 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQADVLRC*YYSYHL
Trigger: CAGATGGTAAGAATAGTACAAACACCTTAGCACATC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCACTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 3 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQALNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 72 bp GCATGTCTCTGTAACAAAACAGATTTCTCCGTCCACTaGGTAATGTTATATTTCACTTCTCCGAAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: ACLCNKTDFSVH*VMLYFTSPKKL
Trigger: CAGCTTCTTCGGAGAAGTGAAATATAACATTACTCAGTGGACGGAGAAATCTGTTTTGTTACAGAGACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 3 (lower is better)
Translates to: SCLRQGDITLIALIEVFQLNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 72 bp CTCAATAGAATAATAAATCTGCTAATCAACACAGTCTaGATTGATTTTCATGACTGCCCACAAGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LNRIINLLINTV*IDFHDCPQGGQ
Trigger: CTGCCCTCCTTGTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGATTAGCAGATTTATTATTCTATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 72 bp AGTGTCAAATCTCCTTTCAGAATACTGTGTGTGCAGTaGTGTGCTAAGGTGTTTGTACTATTCTTACCATCT +
Preference number: 3 (lower is better)
Translates to: SVKSPFRILCVQ*CAKVFVLFLPS
Trigger: AGATGGTAAGAATAGTACAAACACCTTAGCACATCACTGCACACACAGTATTCTGAAAGGAGATTTGACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR TCA 72 bp AAATGTGTTGTCTTAATGTATTTAAGACATGGCTGGTaGAAGCATAAAAACCTTTACAGAGACGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: KCVVLMYLRHGW*KHKNLYRDAVL
Trigger: CAGCACAGCGTCTCTGTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAAATACATTAAGACAACACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACCTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 3 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHLNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTACTACTGGGCATTCTaGAGCGAGGCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAYYWAF*SEACPT
Trigger: AGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCGCTCAAGGCAGCCTGTaGCGACAGTCTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAAQGSL*RQSVLW
Trigger: CCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCTTCTTCCTGCAGCCTaGTCACCTTCAGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPALLPAA*SPSELP
Trigger: TGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAAATTTGGGACTTGTTaGCGAGCTGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAKFGTC*RAGAGV
Trigger: CACTCCAGCCCCAGCTCGCCAACAAGTCCCAAATTT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAACCTCCTGACCTTCTaGGAGGCATGTCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPANLLTF*EACLCN
Trigger: GTTACAGAGACATGCCTCTCAGAAGGTCAGGAGGTT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTCTGCACTAGCAAGCTaGAATGGTACGGCCGTACTA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPASALAS*NGTAVL
Trigger: TAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAACATTGTAGGAGCTTaGAGGCCAGGTCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPANIVGA*RPGPLH
Trigger: ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAATCCTGTGTGCTCTTaGGAATGTGCTGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPANPVCS*ECAACQ
Trigger: CTGACAAGCAGCACATTCTCAAGAGCACACAGGATT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCAATTTTCTTGTAAGTaGAATCCACCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAQFSCK*NPPQGA
Trigger: CGCTCCCTGTGGTGGATTTCACTTACAAGAAAATTG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCGATCAGAAGGTTCTGTaGTTTCAGGTCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPADQKVL*FQVSVQ
Trigger: TTGCACAGAGACCTGAAACCACAGAACCTTCTGATC...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPASKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTTTTTCCAAACACGATaGACTTGCCTGTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAFFQTR*TCLWSS
Trigger: GGAACTCCACAGGCAAGTCCATCGTGTTTGGAAAAA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKTPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTGTGCTGCTTGTCAGTaGTTGCTGTTTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPACAACQ*LLFDRL
Trigger: AAGTCTATCAAACAGCAAGCACTGACAAGCAGCACA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCTTTCTAGTCACTCTTaGGAGGTAGAAATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPALSSHS*EVEIAS
Trigger: AGAAGCGATTTCTACCTCGCAAGAGTGACTAGAAAG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCCATGTGTCCTCATTTaGTGTTCCAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAPCVLI*CSKNQK
Trigger: TTTCTGGTTCTTGGAACACCAAATGAGGACACATGG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGTGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTTTGGATTTCCTGTATaGGTGGCAAGGATAGGTACT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAFGFPV*VARIGT
Trigger: AGTACCTATCCTTGCCACCCATACAGGAAATCCAAA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAGACCTCGCAGCAACTaGAATAAAAACAACTTCACA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPARPRSN*NKNNFT
Trigger: TGTGAAGTTGTTTTTATTTCAGTTGCTGCGAGGTCT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTTCTTACCATCTGTTTaGGTTCAGGCTATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAFLPSV*VQAIPS
Trigger: TGAAGGAATAGCCTGAACTCAAACAGATGGTAAGAA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCTCAAGGCAGCCTGTaGCGACAGTCTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPAQGSL*RQSVLW
Trigger: CCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPANSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCAGGGGTTTGATCACTaGGTCCATTCCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPQGFDH*VHSLAV
Trigger: AACTGCCAGGGAATGGACTCAGTGATCAAACCCCTG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCATAACCTAGGGTATTaGTTATACTGGCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAHNLGY*LYWLSY
Trigger: ATATGACAGCCAGTATAATCAATACCCTAGGTTATG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCCGGCTGCGGCTCAATaGGGTCACACATCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRPAAAQ*GHTSGR
Trigger: TCGCCCAGATGTGTGACCTCATTGAGCCGCAGCCGG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGGAGGCCAGGTCCTCTaGATGGTTCACATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARGGQVL*MVHIAE
Trigger: CTCAGCTATGTGAACCATGCAGAGGACCTGGCCTCC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTAGGCCTCACTTTCTTTaGAAGCCTGGAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPRPHFL*KPGGAP
Trigger: AGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTGGATCCAGTTTCCTTaGTGTATTGAGCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAWIQFP*CIELDY
Trigger: ATAATCAAGCTCAATACACCAAGGAAACTGGATCCA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCAGGGGTTTGATCACTaGGTCCATTCCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARQGFDH*VHSLAV
Trigger: AACTGCCAGGGAATGGACTCAGTGATCAAACCCCTG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGCTCTGCAGCAGCATTaGAGCCAAAGTAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARALQQH*SQSNRA
Trigger: TGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000406263.5
CDS-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCAAATGGGTCAAAAGTaGTCTGTGTCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKQMGQK*SVSSEL
Trigger: GAGTTCAGAGGACACAGAGCACTTTTGACCCATTTG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGTCCCAAAGGCCCGCATaGTTTCTCCAGCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARSQRPA*FLQLLV
Trigger: AACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGA...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCTCTTGAGAATGTGCTaGTTGTCAGTGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKLLRMC*LSVLAV
Trigger: AACAGCAAGCACTGACAAGCAGCACATTCTCAAGAG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTTTACAGAGACGCTGTaGTGCAGAGGGAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKFTETL*CRGKSN
Trigger: GTTTGATTTCCCTCTGCAGCACAGCGTCTCTGTAAA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCCACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTTCACTAAAATACTCGTaGCTCAAGGCAGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPSLKYS*LKAACA
Trigger: GGCACAGGCTGCCTTGAGCCACGAGTATTTTAGTGA...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGATACTGTGTGTGCAGTaGTGTGCTAAGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKILCVQ*CAKVFV
Trigger: TACAAACACCTTAGCACATCACTGCACACACAGTAT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTGTGCTGCTTGTCAGTaGTTGCTGTTTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKCAACQ*LLFDRL
Trigger: AAGTCTATCAAACAGCAAGCACTGACAAGCAGCACA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGACATGTCAAGGCAGGTaGAATATTCTGTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKTCQGR*NILLSL
Trigger: TAGGCTCAACAGAATATTCCACCTGCCTTGACATGT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCCATGTGTCCTCATTTaGTGTTCCAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKPCVLI*CSKNQK
Trigger: TTTCTGGTTCTTGGAACACCAAATGAGGACACATGG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGTCACTAAAATACTCGTaGCTCAAGGCAGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARSLKYS*LKAACA
Trigger: GGCACAGGCTGCCTTGAGCCACGAGTATTTTAGTGA...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGTGCTCTTGAGAATGTaGTGCTTGTCAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARVLLRM*CLSVLA
Trigger: AGCAAGCACTGACAAGCAGCACATTCTCAAGAGCAC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCTTTCTCCAGCTTCTaGTTGCAATCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPAFSSF*LQSHIW
Trigger: CCAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGAAATGTGGTAAAGAATaGACTCCAGGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARKCGKE*TPGHVS
Trigger: GGACACATGGCCTGGAGTTCATTCTTTACCACATTT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTGTGTTTTTGGTGTATaGGAAAAGTACAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKCVFGV*EKYKAV
Trigger: TACTGCCTTGTACTTTTCTCATACACCAAAAACACA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAGAGTAACCGGGCTCTaGAGCAGCATTGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRRVTGL*SSIAAK
Trigger: TTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000406263.5
CDS-3UTR GCA 90 bp GTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGAGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VTTSLEYVWLGTDFALARELGLE*RLTLGD
Trigger: GTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTC...TCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACACTGGGAGCCGGCCTaGATCAGGCAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQHWEPA*IRQPSL
Trigger: GAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTTCAGAATACTGTGTGTaGAGTGATGTGCTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPSEYCV*SDVLRC
Trigger: ACACCTTAGCACATCACTGCACACACAGTATTCTGA...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGATGGACAGCCACCCTaGTTTATGTACCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPDGQPP*FMYPIF
Trigger: AAAAATAGGGTACATAAAGCAGGGTGGCTGTCCATC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPSWFLK*VKSALC
Trigger: ACACAGAGCACTTTTGACCCATTTGAGAAACCAGCT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGATCAGAAGGTTCTGTaGTTTCAGGTCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARDQKVL*FQVSVQ
Trigger: TTGCACAGAGACCTGAAACCACAGAACCTTCTGATC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGAGAGACACCAAACTTTaGATTTCCTGTATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARRDTKL*ISCMGG
Trigger: GCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGTCTCCTTGGTATGGATaGTGTCATGAAGTAGCACTA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARSPWYG*CHEVAL
Trigger: TAGTGCTACTTCATGACATCATCCATACCAAGGAGA...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGATCAGAAGGTTCTGTACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: RPKSASFNSPVSLIRRFCTPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...ACAGAACCTTCTGATCAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTACAAGAAAACAACAGTaGCAGCTGACAAACCATTAC +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPTRKQQ*QLTNHY
Trigger: GTAATGGTTTGTCAGCTGTCACTGTTGTTTTCTTGT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSELGLE*RLTLGD
Trigger: GTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRVPSSS*SLITFR
Trigger: TCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGAC...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCTGCTTGTCAGTGCTTaGTGTTTGATAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARLLVSA*CLIDFC
Trigger: GCAAAAGTCTATCAAACAGCAAGCACTGACAAGCAG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCTACTACTGGGCATTCTaGAGCGAGGCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSYYWAF*SEACPT
Trigger: AGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTA...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTACTACTGGGCATTCTaGAGCGAGGCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWYYWAF*SEACPT
Trigger: AGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGATGGACAGCCACCCTaGTTTATGTACCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARDGQPP*FMYPIF
Trigger: AAAAATAGGGTACATAAAGCAGGGTGGCTGTCCATC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCTTTCTAGTCACTCTTaGGAGGTAGAAATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARLSSHS*EVEIAS
Trigger: AGAAGCGATTTCTACCTCGCAAGAGTGACTAGAAAG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARIYSFL*LQASKG
Trigger: TCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATAT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGACATGTCAAGGCAGGTaGAATATTCTGTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARTCQGR*NILLSL
Trigger: TAGGCTCAACAGAATATTCCACCTGCCTTGACATGT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAAGGTAAGCAACAGGTaGGGCCCCACAGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFKVSNR*GPTVRG
Trigger: GCCCCGGACTGTGGGGCCCCACCTGTTGCTTACCTT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGACCGAAATCTCCGCCTAACTTTAGGTaGCTCTTTGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLEYVWLGTDFALARPKSPPNFR*LFASGG
Trigger: TCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGG...AGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGGTCCCTCAACTCCTTaGGTAAGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFGPSTP*VREAGP
Trigger: TGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGATTTCTCCGTCCACTaGGTAATGTTATATTTCACT +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPDFSVH*VMLYFT
Trigger: AGTGAAATATAACATTACTCAGTGGACGGAGAAATC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTCTAATCAACACAGTCTaGATTGATTTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPLINTV*IDFHDC
Trigger: GCAGTCATGAAAATCAATTCAGACTGTGTTGATTAG...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGGCTAGGGACGGATTTTaGTCTTGCAAGACCGAAATC +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRARDGF*SCKTEI
Trigger: GATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGC...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAGGCCTCACTTTCTTTaGAAGCCTGGAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFRPHFL*KPGGAP
Trigger: AGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGGGAGATGGAAGTTATaGGCAATTATGCAGCATATT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARGRWKL*AIMQHI
Trigger: AATATGCTGCATAATTGCGCATAACTTCCATCTCCC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GATTTTGCTCTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: DFALARPKSASFNSPVSLTESIP*QFRVDI
Trigger: GATGTCTACACGGAACTGCCAGGGAATGGACTCAGT...CAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAAATTTGGGACTTGTTaGCGAGCTGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFKFGTC*RAGAGV
Trigger: CACTCCAGCCCCAGCTCGCCAACAAGTCCCAAATTT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCAGCTTTTCCAAATTTaGGACTTGTTGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRQLFQI*DLLASW
Trigger: CCAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTCGTTGGAGTATGTGTaGCTAGGGACGGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRSLEYV*LGTDFA
Trigger: AGCAAAATCCGTCCCTAGCCACACATACTCCAACGA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCATGAGGTCACACATCTaGGCGACGCGGAGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFMRSHI*ATRSPD
Trigger: GTCGGGGCTCCGCGTCGCCCAGATGTGTGACCTCAT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR TCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCTTCTTCCTGCAGCCTaGTCACCTTCAGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWLLPAA*SPSELP
Trigger: TGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGTCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGGTCCCTCAACTCCTTaGGTAAGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAGPSTP*VREAGP
Trigger: TGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAACCTCCTGACCTTCTaGGAGGCATGTCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFNLLTF*EACLCN
Trigger: GTTACAGAGACATGCCTCTCAGAAGGTCAGGAGGTT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAGCAGAGGGAGAATATaGTTGCAAATAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRSRGRI*LQIGEG
Trigger: TCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCATAACCTAGGGTATTaGTTATACTGGCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARHNLGY*LYWLSY
Trigger: ATATGACAGCCAGTATAATCAATACCCTAGGTTATG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGATCAGAAGGTTCTGTTGTCTCCCTCAGGCTTaGTTCACCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: RPKSASFNSPVSLIRRFCCLPQA*FTWNSL
Trigger: TAAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACA...ACAGAACCTTCTGATCAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGAGTAACCGGGCTCTaGAGCAGCATTGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWRVTGL*SSIAAK
Trigger: TTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000406263.5
CDS-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAELGLE*RLTLGD
Trigger: GTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFELGLE*RLTLGD
Trigger: GTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGACTTCCCATTTACCTTaGTTTTCCCTTTGTATACTG +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARTSHLP*FSLCIL
Trigger: CAGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGT...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR GCA 90 bp GTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGACCGAAATCTGCGACGGATTTTGCTCTTaGAAGACCGAAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGVCVARDGFCSCKTEICDGFCS*KTEICQ
Trigger: CTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTC...GCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp GATTTTGCTCTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGGCTAGGGACGGATTTTaGTCTTGCAAGACCGAAATC +
Preference number: 4 (lower is better)
Translates to: DFALARPKSASFNSPVSLARDGF*SCKTEI
Trigger: GATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGC...CAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGCTGAGCTTATTCCATaGTTGTCTAAGGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARAELIP*LSKVFR
Trigger: TCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATACTACTGGGCATTCTaGAGCGAGGCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAYYWAF*SEACPT
Trigger: AGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAACATTGTAGGAGCTTaGAGGCCAGGTCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFNIVGA*RPGPLH
Trigger: ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCTGGCCGCAGTACTACTaGGCATTCTGCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFWPQYY*AFCSEA
Trigger: GGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCA...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKSPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CAA 72 bp ACATCTGGAGGTCTGTACCACAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TSGGLYHKVTTS*EYVWLGTDFAL
Trigger: AAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTACCTTGTGGTACAGACCTCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACAGGGGTTTGATCACTaGGTCCATTCCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGQGFDH*VHSLAV
Trigger: AACTGCCAGGGAATGGACTCAGTGATCAAACCCCTG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTGCACATATTCAAACACAAGTGTCAGCGTCTCCTTGGTATGGATGATGTCATGCAGGGGTTTGATCACTaGGTCCATTCCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VHIFKHKCQRLLGMDDVMQGFDH*VHSLAV
Trigger: AACTGCCAGGGAATGGACTCAGTGATCAAACCCCTG...CATGACATCATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAACCGCCTAACTTTAGGTaGCTCTTTGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKPPNFR*LFASGG
Trigger: TCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGG...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACCGCCTAACTTTAGGTaGCTCTTTGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGPPNFR*LFASGG
Trigger: TCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTGTCTCCCTCAGGCTTaGTTCACCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFCLPQA*FTWNSL
Trigger: TAAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSVPSSS*SLITFR
Trigger: TCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGAC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWVPSSS*SLITFR
Trigger: TCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGAC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGGAGGCCAGGTCCTCTaGATGGTTCACATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFGGQVL*MVHIAE
Trigger: CTCAGCTATGTGAACCATGCAGAGGACCTGGCCTCC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGCTCAAGGCAGCCTGTaGCGACAGTCTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAAQGSL*RQSVLW
Trigger: CCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTCCCAAAGGCCCGCATaGTTTCTCCAGCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFSQRPA*FLQLLV
Trigger: AACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRIYSFL*LQASKG
Trigger: TCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATAT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAAATTTGGGACTTGTTaGCGAGCTGGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFKFGTC*RAGAGV
Trigger: CACTCCAGCCCCAGCTCGCCAACAAGTCCCAAATTT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp AGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGATCAGAAGGTTCTGTGATCAGAAGGTTCTGTaGTTTCAGGTCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RPKSASFNSPVSLIRRFCDQKVL*FQVSVQ
Trigger: TTGCACAGAGACCTGAAACCACAGAACCTTCTGATC...ACAGAACCTTCTGATCAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CCA 90 bp GTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGATCGTTGGAGTATGTGTaGCTAGGGACGGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: VTTSLEYVWLGTDFALARSLEYV*LGTDFA
Trigger: AGCAAAATCCGTCCCTAGCCACACATACTCCAACGA...TCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAACCGCCTAACTTTAGGTaGCTCTTTGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKPPNFR*LFASGG
Trigger: TCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGG...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCCGCCTAACTTTAGGTaGCTCTTTGCCAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFPPNFR*LFASGG
Trigger: TCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCACTTCTTCCTGCAGCCTaGTCACCTTCAGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQALLPAA*SPSELP
Trigger: TGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAG...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAATCAGTGTGCACATATTCAAACACAAGTGTCAGCGTCTCCTTGGTATGGATGCTTCTTCCTGCAGCCTaGTCACCTTCAGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: KSVCTYSNTSVSVSLVWMLLPAA*SPSELP
Trigger: TGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAG...CATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCACACTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp GATTTTGCTCTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGTCTCCTTGGTATGGATaGTGTCATGAAGTAGCACTA +
Preference number: 4 (lower is better)
Translates to: DFALARPKSASFNSPVSLSPWYG*CHEVAL
Trigger: TAGTGCTACTTCATGACATCATCCATACCAAGGAGA...CAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAGACCTCGCAGCAACTaGAATAAAAACAACTTCACA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRRPRSN*NKNNFT
Trigger: TGTGAAGTTGTTTTTATTTCAGTTGCTGCGAGGTCT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQATPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTTCTTACCATCTGTTTaGGTTCAGGCTATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRFLPSV*VQAIPS
Trigger: TGAAGGAATAGCCTGAACTCAAACAGATGGTAAGAA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGGCTCATACAGCAACTaGATTCACATCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFGSYSN*IHIFLH
Trigger: GTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKVPSSS*SLITFR
Trigger: TCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGAC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGCTAGGGACGGATTTTaGTCTTGCAAGACCGAAATC +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWARDGF*SCKTEI
Trigger: GATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGGAGGCCAGGTCCTCTaGATGGTTCACATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFGGQVL*MVHIAE
Trigger: CTCAGCTATGTGAACCATGCAGAGGACCTGGCCTCC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGGAGGCCAGGTCCTCTaGATGGTTCACATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQGGQVL*MVHIAE
Trigger: CTCAGCTATGTGAACCATGCAGAGGACCTGGCCTCC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGCTCAAGGCAGCCTGTaGCGACAGTCTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQAQGSL*RQSVLW
Trigger: CCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGTGCTCTTGAGAATGTaGTGCTTGTCAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSVLLRM*CLSVLA
Trigger: AGCAAGCACTGACAAGCAGCACATTCTCAAGAGCAC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAGGCCTCACTTTCTTTaGAAGCCTGGAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFRPHFL*KPGGAP
Trigger: AGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTGTGCCTCTAAAATATaGTGCTGTGGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRCASKI*CCGKRN
Trigger: ATTCCTTTTCCCACAGCAGCATATTTTAGAGGCACA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFTESIP*QFRVDI
Trigger: GATGTCTACACGGAACTGCCAGGGAATGGACTCAGT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CCACAAGGTAACCACTTCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PQGNHFVGVCVARDGFCSSWFLK*VKSALC
Trigger: ACACAGAGCACTTTTGACCCATTTGAGAAACCAGCT...AGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGAAGTGGTTACCTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCCAGCTTTTCCAAATTTaGGACTTGTTGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSQLFQI*DLLASW
Trigger: CCAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTG...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAAACATTGTAGGAGCTTaGAGGCCAGGTCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGNIVGA*RPGPLH
Trigger: ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGCTTTCTCCAGCTTCTaGTTGCAATCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFAFSSF*LQSHIW
Trigger: CCAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTCACCCCAGAATCAGTaGATGGACAGCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALSPQNQ*MDSHPA
Trigger: AGCAGGGTGGCTGTCCATCCACTGATTCTGGGGTGA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAACAACTTCCCCAAACTaGTCCAGGCACAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQATTSPN*SRHSSD
Trigger: GTCTGAGCTGTGCCTGGACCAGTTTGGGGAAGTTGT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCTTCTTCCTGCAGCCTaGTCACCTTCAGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFLLPAA*SPSELP
Trigger: TGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQTPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCACTCCCCCGTGTCACTaGTCAGAAGGTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFTPPCH*SEGSVV
Trigger: AACCACAGAACCTTCTGATCAGTGACACGGGGGAGT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAAATGTGGTAAAGAATaGACTCCAGGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSKCGKE*TPGHVS
Trigger: GGACACATGGCCTGGAGTTCATTCTTTACCACATTT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAAATCCTGTGTGCTCTTaGGAATGTGCTGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKNPVCS*ECAACQ
Trigger: CTGACAAGCAGCACATTCTCAAGAGCACACAGGATT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAACCTCCTGACCTTCTaGGAGGCATGTCTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQANLLTF*EACLCN
Trigger: GTTACAGAGACATGCCTCTCAGAAGGTCAGGAGGTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAGCAGAGGGAGAATATaGTTGCAAATAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSSRGRI*LQIGEG
Trigger: TCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGCAGAGGGAGAATATaGTTGCAAATAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSRGRI*LQIGEG
Trigger: TCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCATAACCTAGGGTATTaGTTATACTGGCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRHNLGY*LYWLSY
Trigger: ATATGACAGCCAGTATAATCAATACCCTAGGTTATG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGGCTCATACAGCAACTaGATTCACATCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSGSYSN*IHIFLH
Trigger: GTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGCTCTGCAGCAGCATTaGAGCCAAAGTAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQALQQH*SQSNRA
Trigger: TGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000406263.5
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHELGLE*RLTLGD
Trigger: GTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AAATCAGTGTGCACATATTCAAACACAAGTGTCAGCGTCTCCTTGGTATGGATGGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KSVCTYSNTSVSVSLVWMVPSSS*SLITFR
Trigger: TCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGAC...CATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCACACTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGCTAGGGACGGATTTTaGTCTTGCAAGACCGAAATC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGARDGF*SCKTEI
Trigger: GATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTCCCAAAGGCCCGCATaGTTTCTCCAGCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALSQRPA*FLQLLV
Trigger: AACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCCTCTTGAGAATGTGCTaGTTGTCAGTGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSLLRMC*LSVLAV
Trigger: AACAGCAAGCACTGACAAGCAGCACATTCTCAAGAG...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAAGGCCTCACTTTCTTTaGAAGCCTGGAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQRPHFL*KPGGAP
Trigger: AGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACATCTTCTCGGCCGGCTaGGGCTCAATGAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHIFSAG*GSMRSH
Trigger: GTGTGACCTCATTGAGCCGCAGCCGGCCGAGAAGAT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR CCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATGTGACACATATCTGTaGAGTTCCCACGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKCDTYL*SSHEGR
Trigger: TCTGCCTTCGTGGGAACTCCACAGATATGTGTCACA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKTESIP*QFRVDI
Trigger: GATGTCTACACGGAACTGCCAGGGAATGGACTCAGT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSWFLK*VKSALC
Trigger: ACACAGAGCACTTTTGACCCATTTGAGAAACCAGCT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTCGTTGGAGTATGTGTaGCTAGGGACGGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFSLEYV*LGTDFA
Trigger: AGCAAAATCCGTCCCTAGCCACACATACTCCAACGA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGCAAAAGACATGCCTaGTCCACTTTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSKRHA*STFLQC
Trigger: ACACTGGAGAAAAGTGGACCAGGCATGTCTTTTGCT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGACCGAAATCTAGACCTCGCAGCAACTaGAATAAAAACAACTTCACA +
Preference number: 4 (lower is better)
Translates to: SLEYVWLGTDFALARPKSRPRSN*NKNNFT
Trigger: TGTGAAGTTGTTTTTATTTCAGTTGCTGCGAGGTCT...AGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTCAATTTTCTTGTAAGTaGAATCCACCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFQFSCK*NPPQGA
Trigger: CGCTCCCTGTGGTGGATTTCACTTACAAGAAAATTG...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGTTTCATGCTTTAGATaGAGTCTCCTAACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKVSCFR*SLLTVP
Trigger: GGGGACAGTTAGGAGACTTCATCTAAAGCATGAAAC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGATCCTAAAACAGTATaGCACATTTCAAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFDPKTV*HISSTH
Trigger: GTGAGTGCTTGAAATGTGTCATACTGTTTTAGGATC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTCTGTCATATACACACTaGGGAAAGGATACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFLSYTH*GKDTKR
Trigger: CCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAG...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAACTGTCATATACACACTaGGGAAAGGATACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKLSYTH*GKDTKR
Trigger: CCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAG...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTGTCTCCCTCAGGCTTaGTTCACCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFCLPQA*FTWNSL
Trigger: TAAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGACGGATTTTGCTCTTaGAAGACCGAAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFDGFCS*KTEICQ
Trigger: CTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAGACGGATTTTGCTCTTaGAAGACCGAAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKDGFCS*KTEICQ
Trigger: CTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTC...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGACGGATTTTGCTCTTaGAAGACCGAAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQADGFCS*KTEICQ
Trigger: CTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTCTCCAGCTTCTGGTTaGAATCTCACATTTGGGACA +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFSPASG*NLTFGT
Trigger: TGTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCTGTGCTGCTTGTCAGTaGTTGCTGTTTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSCAACQ*LLFDRL
Trigger: AAGTCTATCAAACAGCAAGCACTGACAAGCAGCACA...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGATTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATTCCTTCCTAGTGGTTaGAAAATGTGCACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKFLPSG*KMCTAL
Trigger: GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCCAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCTAACAGGCCAAGACTaGTTTCAAGGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFLTGQD*FQGSSS
Trigger: GCTGGATGAGCCTTGAAAGCAGTCTTGGCCTGTTAG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGCTTTCTAGTCACTCTTaGGAGGTAGAAATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWLSSHS*EVEIAS
Trigger: AGAAGCGATTTCTACCTCGCAAGAGTGACTAGAAAG...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSIYSFL*LQASKG
Trigger: TCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATAT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALTESIP*QFRVDI
Trigger: GATGTCTACACGGAACTGCCAGGGAATGGACTCAGT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCACAGCTTTTCCAAATTTaGGACTTGTTGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAQLFQI*DLLASW
Trigger: CCAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTG...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGATCAGAAGGTTCTGTaGTTTCAGGTCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKDQKVL*FQVSVQ
Trigger: TTGCACAGAGACCTGAAACCACAGAACCTTCTGATC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGACATGTCAAGGCAGGTaGAATATTCTGTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWTCQGR*NILLSL
Trigger: TAGGCTCAACAGAATATTCCACCTGCCTTGACATGT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAACATTGTAGGAGCTTaGAGGCCAGGTCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALNIVGA*RPGPLH
Trigger: ATGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAATCACTAAAATACTCGTaGCTCAAGGCAGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQSLKYS*LKAACA
Trigger: GGCACAGGCTGCCTTGAGCCACGAGTATTTTAGTGA...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCTTTCTCCAGCTTCTaGTTGCAATCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFAFSSF*LQSHIW
Trigger: CCAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACCCAGAATCAGTGGATaGACAGCCACCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQPRISG*TATLLY
Trigger: ATAAAGCAGGGTGGCTGTCCATCCACTGATTCTGGG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CAA 72 bp AAAGCTTTACCCTCACCCAACTCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATTCCTAGTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: KALPSPNSQKKS*STWLLIPSLDP
Trigger: AGGATCAAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATCTCCTTGGTATGGATaGTGTCATGAAGTAGCACTA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKSPWYG*CHEVAL
Trigger: TAGTGCTACTTCATGACATCATCCATACCAAGGAGA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGATGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAAATGTGGTAAAGAATaGACTCCAGGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAKCGKE*TPGHVS
Trigger: GGACACATGGCCTGGAGTTCATTCTTTACCACATTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAAATGTGGTAAAGAATaGACTCCAGGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFKCGKE*TPGHVS
Trigger: GGACACATGGCCTGGAGTTCATTCTTTACCACATTT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAATCCTGTGTGCTCTTaGGAATGTGCTGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALNPVCS*ECAACQ
Trigger: CTGACAAGCAGCACATTCTCAAGAGCACACAGGATT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGGAGCGAAAGAAAACTaGTCCATGATTCCCTTCATA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKGAKEN*SMIPFI
Trigger: TATGAAGGGAATCATGGATCAGTTTTCTTTCGCTCC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCAATTTTCTTGTAAGTaGAATCCACCACAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFQFSCK*NPPQGA
Trigger: CGCTCCCTGTGGTGGATTTCACTTACAAGAAAATTG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGTTTCATGCTTTAGATaGAGTCTCCTAACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFVSCFR*SLLTVP
Trigger: GGGGACAGTTAGGAGACTTCATCTAAAGCATGAAAC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGATTTCTCCGTCCACTaGGTAATGTTATATTTCACT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFDFSVH*VMLYFT
Trigger: AGTGAAATATAACATTACTCAGTGGACGGAGAAATC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTATACTGTGTGTGCAGTaGTGTGCTAAGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFILCVQ*CAKVFV
Trigger: TACAAACACCTTAGCACATCACTGCACACACAGTAT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTGTGTTTTTGGTGTATaGGAAAAGTACAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFCVFGV*EKYKAV
Trigger: TACTGCCTTGTACTTTTCTCATACACCAAAAACACA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAACAACAGTGACAGCTaGCAAACCATTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSNNSDS*QTITSF
Trigger: GAAAGATGTAATGGTTTGTCAGCTGTCACTGTTGTT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTTTGCAATGCAGGGCTaGTTCAGAAGAATACAGAAT +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWFAMQG*FRRIQN
Trigger: ATTCTGTATTCTTCTGAAGCAGCCCTGCATTGCAAA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR GCA 90 bp TGTGCAAAATATAACGCTGGTGGATGTAAGACAGACCTCGCAGCAACTGAAATACAAATGGGTCAAAAGTaGTCTGTGTCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: CAKYNAGGCKTDLAATEIQMGQK*SVSSEL
Trigger: GAGTTCAGAGGACACAGAGCACTTTTGACCCATTTG...TATTTCAGTTGCTGCGAGGTCTGTCTTACATCCACCAGCGTTATATTTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCAAATGGGTCAAAAGTaGTCTGTGTCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFQMGQK*SVSSEL
Trigger: GAGTTCAGAGGACACAGAGCACTTTTGACCCATTTG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCACTTCCCATTTACCTTaGTTTTCCCTTTGTATACTG +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFTSHLP*FSLCIL
Trigger: CAGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGT...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGACGGATTTTGCTCTTaGAAGACCGAAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQDGFCS*KTEICQ
Trigger: CTGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCGCTAGGGACGGATTTTaGTCTTGCAAGACCGAAATC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALARDGF*SCKTEI
Trigger: GATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGC...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATCTCCAGCTTCTGGTTaGAATCTCACATTTGGGACA +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKSPASG*NLTFGT
Trigger: TGTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTCTCCAGCTTCTGGTTaGAATCTCACATTTGGGACA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSPASG*NLTFGT
Trigger: TGTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATCTCCAGCTTCTGGTTaGAATCTCACATTTGGGACA +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASPASG*NLTFGT
Trigger: TGTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGTGCTCTTGAGAATGTaGTGCTTGTCAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFVLLRM*CLSVLA
Trigger: AGCAAGCACTGACAAGCAGCACATTCTCAAGAGCAC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATCAGAATACTGTGTGTaGAGTGATGTGCTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKSEYCV*SDVLRC
Trigger: ACACCTTAGCACATCACTGCACACACAGTATTCTGA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGATGGACAGCCACCCTaGTTTATGTACCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKDGQPP*FMYPIF
Trigger: AAAAATAGGGTACATAAAGCAGGGTGGCTGTCCATC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGGGAGATGGAAGTTATaGGCAATTATGCAGCATATT +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSGRWKL*AIMQHI
Trigger: AATATGCTGCATAATTGCGCATAACTTCCATCTCCC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAATATACAGTTTCCTCTaGCTACAAGCCAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKIYSFL*LQASKG
Trigger: TCCCTTACTGGCTTGTAGGCAGAGGAAACTGTATAT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTGTGCCTCTAAAATATaGTGCTGTGGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWCASKI*CCGKRN
Trigger: ATTCCTTTTCCCACAGCAGCATATTTTAGAGGCACA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGSWFLK*VKSALC
Trigger: ACACAGAGCACTTTTGACCCATTTGAGAAACCAGCT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGATCAGAAGGTTCTGTaGTTTCAGGTCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFDQKVL*FQVSVQ
Trigger: TTGCACAGAGACCTGAAACCACAGAACCTTCTGATC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAATCGTTGGAGTATGTGTaGCTAGGGACGGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQSLEYV*LGTDFA
Trigger: AGCAAAATCCGTCCCTAGCCACACATACTCCAACGA...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTCGTTGGAGTATGTGTaGCTAGGGACGGATTTTGCT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALSLEYV*LGTDFA
Trigger: AGCAAAATCCGTCCCTAGCCACACATACTCCAACGA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAGCTTTCTCCAGCTTCTaGTTGCAATCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAAFSSF*LQSHIW
Trigger: CCAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGC...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTTTTATGCCACTCTGTaGCTTTCAAGTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: IPRGLTFFASLEVLLETFFYATL*LSSSDI
Trigger: AATGTCTGAACTTGAAAGCCACAGAGTGGCATAAAA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAAGTCCTTGTCAACCTaGCTCCTAATTCCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFKSLST*LLIPSL
Trigger: AAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAAGAGACACCAAACTTTaGATTTCCTGTATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKRDTKL*ISCMGG
Trigger: GCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAACTAGCAAGCTGAAATaGTACGGCCGTACTACAACC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQTSKLK*YGRTTT
Trigger: GGTTGTAGTACGGCCGTACCATTTCAGCTTGCTAGT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAGACCTCGCAGCAACTaGAATAAAAACAACTTCACA +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFRPRSN*NKNNFT
Trigger: TGTGAAGTTGTTTTTATTTCAGTTGCTGCGAGGTCT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGATCCTAAAACAGTATaGCACATTTCAAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGDPKTV*HISSTH
Trigger: GTGAGTGCTTGAAATGTGTCATACTGTTTTAGGATC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTCTTACCATCTGTTTaGGTTCAGGCTATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFFLPSV*VQAIPS
Trigger: TGAAGGAATAGCCTGAACTCAAACAGATGGTAAGAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATACTGTGTGTGCAGTaGTGTGCTAAGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKILCVQ*CAKVFV
Trigger: TACAAACACCTTAGCACATCACTGCACACACAGTAT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACTGTCATATACACACTaGGGAAAGGATACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQLSYTH*GKDTKR
Trigger: CCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAACAAGAAAACAACAGTaGCAGCTGACAAACCATTAC +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKTRKQQ*QLTNHY
Trigger: GTAATGGTTTGTCAGCTGTCACTGTTGTTTTCTTGT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCAAATGGGTCAAAAGTaGTCTGTGTCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFQMGQK*SVSSEL
Trigger: GAGTTCAGAGGACACAGAGCACTTTTGACCCATTTG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCCAAATGGGTCAAAAGTaGTCTGTGTCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALQMGQK*SVSSEL
Trigger: GAGTTCAGAGGACACAGAGCACTTTTGACCCATTTG...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGCTGAGCTTATTCCATaGTTGTCTAAGGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSAELIP*LSKVFR
Trigger: TCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCCTGCTTGTCAGTGCTTaGTGTTTGATAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFLLVSA*CLIDFC
Trigger: GCAAAAGTCTATCAAACAGCAAGCACTGACAAGCAG...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCTTTACAGAGACGCTGTaGTGCAGAGGGAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFFTETL*CRGKSN
Trigger: GTTTGATTTCCCTCTGCAGCACAGCGTCTCTGTAAA...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACAGAGAACAGGGGTTTaGTTTAGCAGAAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGQRTGV*FSRKFP
Trigger: AGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAACATGTCAAGGCAGGTaGAATATTCTGTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKTCQGR*NILLSL
Trigger: TAGGCTCAACAGAATATTCCACCTGCCTTGACATGT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCTCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSSSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAACAGTCATGCTATGTaGCTTGAAAATGCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFNSHAM*LENAKQ
Trigger: CTGCTTAGCATTTTCAAGCCACATAGCATGACTGTT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATTTGGATTTCCTGTATaGGTGGCAAGGATAGGTACT +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKFGFPV*VARIGT
Trigger: AGTACCTATCCTTGCCACCCATACAGGAAATCCAAA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAAGAGACACCAAACTTTaGATTTCCTGTATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQRDTKL*ISCMGG
Trigger: GCCACCCATACAGGAAATCCAAAGTTTGGTGTCTCT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAATCCTGTGTGCTCTTaGGAATGTGCTGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHNPVCS*ECAACQ
Trigger: CTGACAAGCAGCACATTCTCAAGAGCACACAGGATT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGATTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGLRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAAAGTAAGAACCCAATaGTGTCTTCCAATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAKVRTQ*CLPIGL
Trigger: CAAGCCAATTGGAAGACATCATTGGGTTCTTACTTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGACTAATCAACACAGTCTaGATTGATTTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGLINTV*IDFHDC
Trigger: GCAGTCATGAAAATCAATTCAGACTGTGTTGATTAG...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATTCTTACCATCTGTTTaGGTTCAGGCTATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKFLPSV*VQAIPS
Trigger: TGAAGGAATAGCCTGAACTCAAACAGATGGTAAGAA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCATACTGTGTGTGCAGTaGTGTGCTAAGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFILCVQ*CAKVFV
Trigger: TACAAACACCTTAGCACATCACTGCACACACAGTAT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTCATAACCTAGGGTATTaGTTATACTGGCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFHNLGY*LYWLSY
Trigger: ATATGACAGCCAGTATAATCAATACCCTAGGTTATG...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATGTGTTTTTGGTGTATaGGAAAAGTACAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKCVFGV*EKYKAV
Trigger: TACTGCCTTGTACTTTTCTCATACACCAAAAACACA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCACAAGAAAACAACAGTaGCAGCTGACAAACCATTAC +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFTRKQQ*QLTNHY
Trigger: GTAATGGTTTGTCAGCTGTCACTGTTGTTTTCTTGT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAAAGACCAAAAACTGTTaGGAAGAACTCAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: REKKQRENMIANRGRREGKTKNC*EELKGH
Trigger: ATGTCCTTTGAGTTCTTCTCAACAGTTTTTGGTCTT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTACTTCCCATTTACCTTaGTTTTCCCTTTGTATACTG +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFTSHLP*FSLCIL
Trigger: CAGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGCTGAGCTTATTCCATaGTTGTCTAAGGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKAELIP*LSKVFR
Trigger: TCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACTGCTTGTCAGTGCTTaGTGTTTGATAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQLLVSA*CLIDFC
Trigger: GCAAAAGTCTATCAAACAGCAAGCACTGACAAGCAG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAATGTGCTGCTTGTCAGTaGTTGCTGTTTGATAGACTT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQCAACQ*LLFDRL
Trigger: AAGTCTATCAAACAGCAAGCACTGACAAGCAGCACA...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGTGCTCTTGAGAATGTaGTGCTTGTCAGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHVLLRM*CLSVLA
Trigger: AGCAAGCACTGACAAGCAGCACATTCTCAAGAGCAC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCTCAGAATACTGTGTGTaGAGTGATGTGCTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFSEYCV*SDVLRC
Trigger: ACACCTTAGCACATCACTGCACACACAGTATTCTGA...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGATGGACAGCCACCCTaGTTTATGTACCCTATTTTT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQDGQPP*FMYPIF
Trigger: AAAAATAGGGTACATAAAGCAGGGTGGCTGTCCATC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFSWFLK*VKSALC
Trigger: ACACAGAGCACTTTTGACCCATTTGAGAAACCAGCT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACCATGTGTCCTCATTTaGTGTTCCAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQPCVLI*CSKNQK
Trigger: TTTCTGGTTCTTGGAACACCAAATGAGGACACATGG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCCATGTGTCCTCATTTaGTGTTCCAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFPCVLI*CSKNQK
Trigger: TTTCTGGTTCTTGGAACACCAAATGAGGACACATGG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAAAGTCCTTGTCAACCTaGCTCCTAATTCCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQKSLST*LLIPSL
Trigger: AAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAAGTCCTTGTCAACCTaGCTCCTAATTCCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALKSLST*LLIPSL
Trigger: AAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATGGATCCAGTTTCCTTaGTGTATTGAGCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKWIQFP*CIELDY
Trigger: ATAATCAAGCTCAATACACCAAGGAAACTGGATCCA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AAATATAACGCTGGTGGATGTAAGACAGACCTCGCAGCAACTGAAATAAAAACATGCTTGTCCATGTACTaGCATAAATCAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: KYNAGGCKTDLAATEIKTCLSMY*HKSVCT
Trigger: TGTGCACACTGATTTATGTCAGTACATGGACAAGCA...TGTTTTTATTTCAGTTGCTGCGAGGTCTGTCTTACATCCACCAGCGTTATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCAGACCTCGCAGCAACTaGAATAAAAACAACTTCACA +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFRPRSN*NKNNFT
Trigger: TGTGAAGTTGTTTTTATTTCAGTTGCTGCGAGGTCT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATTAAGACATGGCTGGTaGAAGCATAAAAACCTTTAC +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKLRHGW*KHKNLY
Trigger: GTAAAGGTTTTTATGCTTTCACCAGCCATGTCTTAA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAATTACTGAAGAAGTGTaGACACCAAATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAITEEV*TPNVLS
Trigger: AGACAACACATTTGGTGTTCACACTTCTTCAGTAAT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKSKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATCTAAAACCTGCATTTaGACAGTTATTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASKTCI*TVIPGD
Trigger: ATCTCCTGGAATAACTGTTCAAATGCAGGTTTTAGA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGATCCTAAAACAGTATaGCACATTTCAAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQDPKTV*HISSTH
Trigger: GTGAGTGCTTGAAATGTGTCATACTGTTTTAGGATC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGATCCTAAAACAGTATaGCACATTTCAAGCACTCAC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFDPKTV*HISSTH
Trigger: GTGAGTGCTTGAAATGTGTCATACTGTTTTAGGATC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAGCAGAGGGAGAATATaGTTGCAAATAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHSRGRI*LQIGEG
Trigger: TCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACCTGTCATATACACACTaGGGAAAGGATACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHLSYTH*GKDTKR
Trigger: CCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAG...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTGTGTTTTTGGTGTATaGGAAAAGTACAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFCVFGV*EKYKAV
Trigger: TACTGCCTTGTACTTTTCTCATACACCAAAAACACA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCAACAACAGTGACAGCTaGCAAACCATTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFNNSDS*QTITSF
Trigger: GAAAGATGTAATGGTTTGTCAGCTGTCACTGTTGTT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAACAACAGTGACAGCTaGCAAACCATTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALNNSDS*QTITSF
Trigger: GAAAGATGTAATGGTTTGTCAGCTGTCACTGTTGTT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAACAAGAAAACAACAGTaGCAGCTGACAAACCATTAC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQTRKQQ*QLTNHY
Trigger: GTAATGGTTTGTCAGCTGTCACTGTTGTTTTCTTGT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCAGAAAGATATTGATTTaGAATGCAGGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFRKILI*NAGLLQ
Trigger: CTGAAGCAGCCCTGCATTGCAAATCAATATCTTTCT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGAGAAAACAGGGTCTTaGCAGCTTCAATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQEKTGS*QLQFSC
Trigger: ACAAGAAAATTGAAGCTGGCAAGACCCTGTTTTCTC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCGGGAGATGGAAGTTATaGGCAATTATGCAGCATATT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALGRWKL*AIMQHI
Trigger: AATATGCTGCATAATTGCGCATAACTTCCATCTCCC...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAATGTGCCTCTAAAATATaGTGCTGTGGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQCASKI*CCGKRN
Trigger: ATTCCTTTTCCCACAGCAGCATATTTTAGAGGCACA...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCATCTTCACGTAGTTCTTaGAAATCACAAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQASSRSS*KSQGIQ
Trigger: TTGGATACCTTGTGATTTCCAAGAACTACGTGAAGA...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATGGATCCAGTTTCCTTaGTGTATTGAGCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: VREQGFALAENFLPSGCKWIQFP*CIELDY
Trigger: ATAATCAAGCTCAATACACCAAGGAAACTGGATCCA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTCTCCTTGGTATGGATaGTGTCATGAAGTAGCACTA +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHSPWYG*CHEVAL
Trigger: TAGTGCTACTTCATGACATCATCCATACCAAGGAGA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGATTTCTCCGTCCACTaGGTAATGTTATATTTCACT +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQDFSVH*VMLYFT
Trigger: AGTGAAATATAACATTACTCAGTGGACGGAGAAATC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCTAATCAACACAGTCTaGATTGATTTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFLINTV*IDFHDC
Trigger: GCAGTCATGAAAATCAATTCAGACTGTGTTGATTAG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAACTAATCAACACAGTCTaGATTGATTTTCATGACTGC +
Preference number: 4 (lower is better)
Translates to: SCLRQGDITLIALIEVFQLINTV*IDFHDC
Trigger: GCAGTCATGAAAATCAATTCAGACTGTGTTGATTAG...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACCTTTCTAGTCACTCTTaGGAGGTAGAAATCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHLSSHS*EVEIAS
Trigger: AGAAGCGATTTCTACCTCGCAAGAGTGACTAGAAAG...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTTTTATGCCACTCTGTaGCTTTCAAGTTCAGACATT +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALFYATL*LSSSDI
Trigger: AATGTCTGAACTTGAAAGCCACAGAGTGGCATAAAA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAAGTCCTTGTCAACCTaGCTCCTAATTCCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHKSLST*LLIPSL
Trigger: AAGACTAGGAATTAGGAGCCAGGTTGACAAGGACTT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTTTGGATTTCCTGTATaGGTGGCAAGGATAGGTACT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHFGFPV*VARIGT
Trigger: AGTACCTATCCTTGCCACCCATACAGGAAATCCAAA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
3UTR CAA 72 bp GACCCAGACACAAAAAGTTACCTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATCCCTGTCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: DPDTKSYLNLQR*KCKQFIPVFVL
Trigger: AAGAACAAAGACAGGGATAAATTGCTTACATTTCAACCTCTGGAGATTGAGGTAACTTTTTGTGTCTGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTTTTCAGAAAGATATTaGTTTGCAATGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHFSERY*FAMQGC
Trigger: GCAGCCCTGCATTGCAAATCAATATCTTTCTGAAAA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR TCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAACAACAGTGACAGCTaGCAAACCATTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHNNSDS*QTITSF
Trigger: GAAAGATGTAATGGTTTGTCAGCTGTCACTGTTGTT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGATATTGATTTGCAATaGAGGGCTGCTTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHDIDLQ*RAASEE
Trigger: TTCTTCTGAAGCAGCCCTGCATTGCAAATCAATATC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAGTGGTTGCAAAATGTaGACTGCTCTCAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHSGCKM*TALKEN
Trigger: GTTTTCTTTGAGAGCAGTGCACATTTTGCAACCACT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTTAAAGCAAGATTCCTaGATTGTTTCTAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: FALAENFLPSGCKMCTALLKQDS*IVSKTC
Trigger: GCAGGTTTTAGAAACAATGCAGGAATCTTGCTTTAA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGGGAGATGGAAGTTATaGGCAATTATGCAGCATATT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHGRWKL*AIMQHI
Trigger: AATATGCTGCATAATTGCGCATAACTTCCATCTCCC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTGTGCCTCTAAAATATaGTGCTGTGGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHCASKI*CCGKRN
Trigger: ATTCCTTTTCCCACAGCAGCATATTTTAGAGGCACA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR GCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGCTGAGCTTATTCCATaGTTGTCTAAGGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHAELIP*LSKVFR
Trigger: TCTAAAAACCTTAGACAAGCATGGAATAAGCTCAGC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CCA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACTGGATCCAGTTTCCTTaGTGTATTGAGCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHWIQFP*CIELDY
Trigger: ATAATCAAGCTCAATACACCAAGGAAACTGGATCCA...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CCA 90 bp AGGCGAGCAGCAGGCAGGCGGAGGACGGCAGGCTCCGCTCCGGCCTaGGCCGCAGCTGGGCGGGCGGGGGCGGTTTACGTGGTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: RRAAGRRRTAGSAPA*AAAGRAGAVYVVPG
Trigger: CCCCGGCACCACGTAAACCGCCCCCGCCCGCCCAGCTGCGGCCCAGGCCGGAGCGGAGCCTGCCGTCCTCCGCCTGCCTGCTGCTCGCCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR CAA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCCAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: AAVLLGILQRGLPHWEPAQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CCA 90 bp TTGCCGATCTTCTCGGCCGGCTGCGGCTCAATGAGGTCACACATCTaGGCGACGCGGAGCCCCGACAACTTCCCCAAACTGGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LPIFSAGCGSMRSHI*ATRSPDNFPKLVQA
Trigger: TGCCTGGACCAGTTTGGGGAAGTTGTCGGGGCTCCGCGTCGCCCAGATGTGTGACCTCATTGAGCCGCAGCCGGCCGAGAAGATCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGGAGGCCTCACTTTCTTaGCAAGCCTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKEASLS*QAWRCS
Trigger: GGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTC...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCTCCTAACTGTCCCCTaGGCCGCAGTACTACTGGGC +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARLLTVP*AAVLLG
Trigger: GCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp GCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGCCCCACTGGGAGCCGGCCTCAACACAGTCTGAATaGATTTTCATGACTGCCCAC +
Preference number: 5 (lower is better)
Translates to: AAVLLGILQRGLPHWEPASTQSE*IFMTAH
Trigger: GTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGA...GGCCGGCTCCCAGTGGGGCAGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTTTCCAAATTTGGGACTaGTTGGCGAGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPFQIWD*LASWGW
Trigger: CCAGCCCCAGCTCGCCAACAAGTCCCAAATTTGGAA...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKKVTTS*EYVWLG
Trigger: CCCTAGCCACACATACTCCAACGAAGTGGTTACCTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGAGGCCTCACTTTCTTaGCAAGCCTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAAREASLS*QAWRCS
Trigger: GGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS GCA 90 bp ACGGCCGTACTGTGGAGTTCCCACGAAGGCAGAGTAACCGGGCTCTaGAGCAGCATTGCAGCCAAAGTAACCGTGCATATGCTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: TAVLWSSHEGRVTGL*SSIAAKVTVHMLSR
Trigger: CCTTGACAGCATATGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCGTGGGAACTCCACAGTACGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496279.5
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGGCCATGTGTCCTCATTaGGTGTTCCAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKAMCPH*VFQEPE
Trigger: TTCTGGTTCTTGGAACACCAAATGAGGACACATGGC...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTTCTCCAGCTTCTGGTaGCAATCTCACATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKFSSFW*QSHIWD
Trigger: GTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGAA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGTTGTCTCCCTCAGGCTaGATTCACCTGGAACTCTTT +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKLSPSG*IHLELF
Trigger: AAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACAA...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS CCA 90 bp TCGGTGAGTTCCCATAGCCGTGGCGGCAGGTCACTAAAATACTCGTaGCTCAAGGCAGCCTGTGCCGACAGTCTGTTCTTTGGGGAACAT +
Preference number: 5 (lower is better)
Translates to: SVSSHSRGGRSLKYS*LKAACADSLFFGEH
Trigger: ATGTTCCCCAAAGAACAGACTGTCGGCACAGGCTGCCTTGAGCCACGAGTATTTTAGTGACCTGCCGCCACGGCTATGGGAACTCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGGACGGATTTTGCTCTaGCAAGACCGAAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPGRILL*QDRNLP
Trigger: TGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGGTCATGCTATGTGGCTaGAAAATGCTAAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKVMLCG*KMLSRV
Trigger: GACTCTGCTTAGCATTTTCAAGCCACATAGCATGAC...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGTGACACATATCGTTTaGCTGTTGTCTCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPVTHIV*LLSPSG
Trigger: GCCTGAGGGAGACAACAGCAAAACGATATGTGTCAC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGGACGGATTTTGCTCTaGCAAGACCGAAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARGRILL*QDRNLP
Trigger: TGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCAGTCCGGGGCCAAGTaGTCAAGTCAGAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRQSGAK*SSQRTG
Trigger: CCCTGTTCTCTGACTTGACAACTTGGCCCCGGACTG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAAGACTTCCAGTGGGTaGGAATGTATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKKTSSG*ECMKEE
Trigger: TTCCTCTTTCATACATTCCAACCCACTGGAAGTCTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTGAGAGACACCAAACTTaGGATTTCCTGTATGGGTGG +
Preference number: 5 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPERHQT*DFLYGW
Trigger: CCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTC...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS GCA 90 bp GTGGAGTTCCCACGAAGGCAGAGTAACCGGGCTCTGCAGCAGCATTaGAGCCAAAGTAACCGTGCATATGCTGTCAAGGCAATTCACAAC +
Preference number: 5 (lower is better)
Translates to: VEFPRRQSNRALQQH*SQSNRAYAVKAIHN
Trigger: GTTGTGAATTGCCTTGACAGCATATGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCGTGGGAACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000496279.5
CDS GCA 90 bp GACACATATCTGTGGAGTTCCCACGAAGGCAGAGTAACCGGGCTCTaGAGCAGCATTGCAGCCAAAGTAACCGTGCATATGCTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: DTYLWSSHEGRVTGL*SSIAAKVTVHMLSR
Trigger: CCTTGACAGCATATGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCGTGGGAACTCCACAGATATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGGAACATTGTAGGAGCTaGGAGGCCAGGTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPREHCRS*EARSSA
Trigger: TGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTC...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCCAAACACGATGGACTaGCCTGTGGAGTTCCCACGA +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRPNTMD*PVEFPR
Trigger: TCGTGGGAACTCCACAGGCAAGTCCATCGTGTTTGG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAACTTCCCATTTACCTaGCTTTTCCCTTTGTATACT +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKNFPFT*LFPLYT
Trigger: AGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGTT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGGTCATGCTATGTGGCTaGAAAATGCTAAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARVMLCG*KMLSRV
Trigger: GACTCTGCTTAGCATTTTCAAGCCACATAGCATGAC...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGCTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKLNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CCCACTGGGAGCCGGCCTGCATCAGGCAGCCCTCCCTCCAGATCAAAGCAAAAGAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 5 (lower is better)
Translates to: PTGSRPASGSPPSRSKQKSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...CTTTTGCTTTGATCTGGAGGGAGGGCTGCCTGATGCAGGCCGGCTCCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCCTAAGACTTCCAGTGGGTaGGAATGTATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SPNCPLGRSTTGHSAARPKTSSG*ECMKEE
Trigger: TTCCTCTTTCATACATTCCAACCCACTGGAAGTCTT...AGGCCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGAGGCCTCACTTTCTTaGCAAGCCTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: IPRGLTFFASLEVLLETFEASLS*QAWRCS
Trigger: GGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCAGAAAGATATTGATTaGCAATGCAGGGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARQKDID*QCRAAS
Trigger: TGAAGCAGCCCTGCATTGCAAATCAATATCTTTCTG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR CAA 90 bp CTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGATCAGAAGGGGACGGATTTTGCTCTaGCAAGACCGAAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: LARPKSASFNSPVSLIRRGRILL*QDRNLP
Trigger: TGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCC...CCTTCTGATCAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRKVTTS*EYVWLG
Trigger: CCCTAGCCACACATACTCCAACGAAGTGGTTACCTT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAGGTCCCTCAACTCCTaGAGTAAGGGAAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSRSLNS*SKGSWP
Trigger: GGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAACTCCTAACTGTCCCCTaGGCCGCAGTACTACTGGGC +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKLLTVP*AAVLLG
Trigger: GCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAG...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS GCA 90 bp AGAGAAGCTTCCCTGATAGCTGTGAAAGGTGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGAGCTACCAACTTCCCATTTACCCGA +
Preference number: 5 (lower is better)
Translates to: REASLIAVKGVPSSS*SLITFRATNFPFTR
Trigger: TCGGGTAAATGGGAAGTTGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGACACCTTTCACAGCTATCAGGGAAGCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431029.5
ENST00000436577.3
CDS GCA 90 bp TTTGCACCAGGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTGTGGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: FAPGQAHTATEFTSF*TSKLKWYGRTVEFP
Trigger: TGGGAACTCCACAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCCTGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496279.5
CDS-3UTR CAA 90 bp AAGTCTCCTAACTGTCCCCTTGGCCGCAGTACTACTGGGCATTCTGCAGCGAGGCTTTTCAGAAAGATATaGATTTGCAATGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KSPNCPLGRSTTGHSAARLFRKI*ICNAGL
Trigger: CAGCCCTGCATTGCAAATCAATATCTTTCTGAAAAG...CCTCGCTGCAGAATGCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTTCCAAATTTGGGACTaGTTGGCGAGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWFQIWD*LASWGW
Trigger: CCAGCCCCAGCTCGCCAACAAGTCCCAAATTTGGAA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGAGGCCTCACTTTCTTaGCAAGCCTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFEASLS*QAWRCS
Trigger: GGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp GATTTTGCTCTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGGTGACACATATCGTTTaGCTGTTGTCTCCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DFALARPKSASFNSPVSLVTHIV*LLSPSG
Trigger: GCCTGAGGGAGACAACAGCAAAACGATATGTGTCAC...CAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS GCA 90 bp AGAGAAGCTTCCCTGATAGCTGTGAAAGGTGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGAGCTACCAACTTCCCATTTACCTTG +
Preference number: 5 (lower is better)
Translates to: REASLIAVKGVPSSS*SLITFRATNFPFTL
Trigger: CAAGGTAAATGGGAAGTTGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGACACCTTTCACAGCTATCAGGGAAGCTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp GATTTTGCTCTTGCAAGACCGAAATCTGCCAGCTTTAACTCCCCCGTGTCACTGACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: DFALARPKSASFNSPVSLTLGDS*PVEEVL
Trigger: TAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGT...CAGTGACACGGGGGAGTTAAAGCTGGCAGATTTCGGTCTTGCAAGAGCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGAACATTGTAGGAGCTaGGAGGCCAGGTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: REKKQRENMIANRGRREGEHCRS*EARSSA
Trigger: TGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAGGTCCCTCAACTCCTaGAGTAAGGGAAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQARSLNS*SKGSWP
Trigger: GGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCTCCTAACTGTCCCCTaGGCCGCAGTACTACTGGGC +
Preference number: 5 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFLLTVP*AAVLLG
Trigger: GCCCAGTAGTACTGCGGCCAAGGGGACAGTTAGGAG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS GCA 90 bp TTTGCACCAGGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTACAACCAAGAGA +
Preference number: 5 (lower is better)
Translates to: FAPGQAHTATEFTSF*TSKLKWYGRTTTKR
Trigger: TCTCTTGGTTGTAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCCTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS GCA 90 bp TTTGCACCAGGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTCATCATGCTCAA +
Preference number: 5 (lower is better)
Translates to: FAPGQAHTATEFTSF*TSKLKWYGRTHHAQ
Trigger: TTGAGCATGATGAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCCTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446790.5
CDS CCA 90 bp TCCTCAGGAATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATCTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: SSGIVSRGLITESIP*QFRVDIFVTHICGV
Trigger: AACTCCACAGATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265741.7
CDS CCA 90 bp TCCTCAGGAATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATCGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSGIVSRGLITESIP*QFRVDIFVTHIVLL
Trigger: CAGCAAAACGATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406263.5
ENST00000431029.5
ENST00000436577.3
ENST00000446790.5
CDS CCA 90 bp TCCTCAGGAATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATCAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SSGIVSRGLITESIP*QFRVDIFVTHIKEP
Trigger: TGGCTCTTTGATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430760.5
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTTCCAAATTTGGGACTaGTTGGCGAGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFFQIWD*LASWGW
Trigger: CCAGCCCCAGCTCGCCAACAAGTCCCAAATTTGGAA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCTCAGCTTTTCCAAATTaGGGACTTGTTGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: IPRGLTFFASLEVLLETFSAFPN*GLVGEL
Trigger: CAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTGA...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAGAACATTGTAGGAGCTaGGAGGCCAGGTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: VREQGFALAENFLPSGCKEHCRS*EARSSA
Trigger: TGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTC...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCCCGACAGTCTGTTCTTaGGGGAACATTGTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSPTVCS*GNIVGA
Trigger: AGCTCCTACAATGTTCCCCAAAGAACAGACTGTCGG...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCAGGTCCCTCAACTCCTaGAGTAAGGGAAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: FALAENFLPSGCKMCTALRSLNS*SKGSWP
Trigger: GGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCT...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGAAGACTTCCAGTGGGTaGGAATGTATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRKTSSG*ECMKEE
Trigger: TTCCTCTTTCATACATTCCAACCCACTGGAAGTCTT...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGTCAACACAGTCTGAATaGATTTTCATGACTGCCCAC +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRSTQSE*IFMTAH
Trigger: GTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGA...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CCA 90 bp TCCTCAGGAATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATCTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: SSGIVSRGLITESIP*QFRVDIFVTHISSK
Trigger: CTTTGATGAGATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380050.8
ENST00000449528.5
CDS CCA 90 bp CATACAGCAACTGAATTCACATCTTTCTGCACTAGCAAGCTGAAATaGTACGGCCGTACTACAACCAAGAGAGGGGGATGCATAAGCAAG +
Preference number: 5 (lower is better)
Translates to: HTATEFTSFCTSKLK*YGRTTTKRGGCISK
Trigger: CTTGCTTATGCATCCCCCTCTCTTGGTTGTAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWTLGDS*PVEEVL
Trigger: TAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGT...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTCAGCTTTTCCAAATTaGGGACTTGTTGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSAFPN*GLVGEL
Trigger: CAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTGA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGGACGGATTTTGCTCTaGCAAGACCGAAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFGRILL*QDRNLP
Trigger: TGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFKVTTS*EYVWLG
Trigger: CCCTAGCCACACATACTCCAACGAAGTGGTTACCTT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGCCATGTGTCCTCATTaGGTGTTCCAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSAMCPH*VFQEPE
Trigger: TTCTGGTTCTTGGAACACCAAATGAGGACACATGGC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGGAGCTTATTCCATGCTaGTCTAAGGTTTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRELIPC*SKVFRA
Trigger: AGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTC...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGAACATTGTAGGAGCTaGGAGGCCAGGTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQEHCRS*EARSSA
Trigger: TGCAGAGGACCTGGCCTCCAAGCTCCTACAATGTTC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGAGGTGCTCCTAGAAACTTTCGCTGCTTGTCAGTGCTaGCTGTTTGATAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: IPRGLTFFASLEVLLETFAACQC*LFDRLL
Trigger: CAAAAGTCTATCAAACAGCAAGCACTGACAAGCAGC...GAAAGTTTCTAGGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS GCA 90 bp CATCTTTGTGACACATATCTACTTGTGAAGTACTTCATGGAAAGCTaGAGCGTCACAACCCTGGCAGAGAATCAGAATCACTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: HLCDTYLLVKYFMES*SVTTLAENQNHFHS
Trigger: GCTGTGGAAGTGATTCTGATTCTCTGCCAGGGTTGTGACGCTGCAGCTTTCCATGAAGTACTTCACAAGTAGATATGTGTCACAAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446224.5
CDS CCA 90 bp TCCTCAGGAATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATTAGGGTTTAT +
Preference number: 5 (lower is better)
Translates to: SSGIVSRGLITESIP*QFRVDIFVTHIRVY
Trigger: ATAAACCCTAATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAATTCCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456689.5
CDS CCA 90 bp CTTTACAGCACATTCAGCACATTCCTGATGGCCTTGGTGAATGGATaGATACTCCTAATGTTGACTCTGCAGATCCTCCAGGAATCTAAG +
Preference number: 5 (lower is better)
Translates to: LYSTFSTFLMALVNG*ILLMLTLQILQESK
Trigger: CTTAGATTCCTGGAGGATCTGCAGAGTCAACATTAGGAGTATCCATCCATTCACCAAGGCCATCAGGAATGTGCTGAATGTGCTGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449528.5
CDS CCA 90 bp TCTTCTTTACAGCACATTCAGCACATTCCTGATGGCCTTGGTGAATaGATGGATACTCCTAATGTTGACTCTGCAGATCCTCCAGGAATC +
Preference number: 5 (lower is better)
Translates to: SSLQHIQHIPDGLGE*MDTPNVDSADPPGI
Trigger: GATTCCTGGAGGATCTGCAGAGTCAACATTAGGAGTATCCATCCATTCACCAAGGCCATCAGGAATGTGCTGAATGTGCTGTAAAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449528.5
CDS-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAATTGTGTCCAGGGGTTaGATCACTGAGTCCATTCCC +
Preference number: 5 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAIVSRG*ITESIP
Trigger: GGGAATGGACTCAGTGATCAAACCCCTGGACACAAT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKTLGDS*PVEEVL
Trigger: TAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: REKKQRENMIANRGRREGTLGDS*PVEEVL
Trigger: TAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGGACGGATTTTGCTCTaGCAAGACCGAAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFGRILL*QDRNLP
Trigger: TGGCAGATTTCGGTCTTGCAAGAGCAAAATCCGTCC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAGCCATGTGTCCTCATTaGGTGTTCCAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: REKKQRENMIANRGRREGAMCPH*VFQEPE
Trigger: TTCTGGTTCTTGGAACACCAAATGAGGACACATGGC...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTTTCTCCAGCTTCTGGTaGCAATCTCACATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFFSSFW*QSHIWD
Trigger: GTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGAA...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGCTGCTTGTCAGTGCTaGCTGTTTGATAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWAACQC*LFDRLL
Trigger: CAAAAGTCTATCAAACAGCAAGCACTGACAAGCAGC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACATGCCTGGTCCACTTTTCTCCAGTGTCACATACTCGCCTTCATCCTCCAAGGCTCAATCTCCAGAGGTaGAAATGTAAGCAATTTATC +
Preference number: 5 (lower is better)
Translates to: TCLVHFSPVSHTRLHPPRLNLQR*KCKQFI
Trigger: GATAAATTGCTTACATTTCAACCTCTGGAGATTGAG...CCTTGGAGGATGAAGGCGAGTATGTGACACTGGAGAAAAGTGGACCAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAGGTCCCTCAACTCCTaGAGTAAGGGAAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHRSLNS*SKGSWP
Trigger: GGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGACCT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATTGTCTCCCTCAGGCTaGATTCACCTGGAACTCTTT +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKLSPSG*IHLELF
Trigger: AAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACAA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAATTGTGTCCAGGGGTTaGATCACTGAGTCCATTCCC +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQIVSRG*ITESIP
Trigger: GGGAATGGACTCAGTGATCAAACCCCTGGACACAAT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCGTTGGAGTATGTGTGGCTAGGGACGGATTTTGCTCTTGCAAGACCGAAATCTATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SLEYVWLGTDFALARPKSMHPLY*ISWFLK
Trigger: TTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT...AGATTTCGGTCTTGCAAGAGCAAAATCCGTCCCTAGCCACACATACTCCAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CAA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATCAGCTTTTCCAAATTaGGGACTTGTTGGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: VREQGFALAENFLPSGCKSAFPN*GLVGEL
Trigger: CAGCTCGCCAACAAGTCCCAAATTTGGAAAAGCTGA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCCCGACAGTCTGTTCTTaGGGGAACATTGTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: FALAENFLPSGCKMCTALPTVCS*GNIVGA
Trigger: AGCTCCTACAATGTTCCCCAAAGAACAGACTGTCGG...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCCCGACAGTCTGTTCTTaGGGGAACATTGTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFPTVCS*GNIVGA
Trigger: AGCTCCTACAATGTTCCCCAAAGAACAGACTGTCGG...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTTCTCCAGCTTCTGGTaGCAATCTCACATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFFSSFW*QSHIWD
Trigger: GTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGAA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCTGCTTGTCAGTGCTaGCTGTTTGATAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFAACQC*LFDRLL
Trigger: CAAAAGTCTATCAAACAGCAAGCACTGACAAGCAGC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAGTCATGCTATGTGGCTaGAAAATGCTAAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKVMLCG*KMLSRV
Trigger: GACTCTGCTTAGCATTTTCAAGCCACATAGCATGAC...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGTCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATT +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWSQKKS*STWLLI
Trigger: AATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGA...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGAGAGACACCAAACTTaGGATTTCCTGTATGGGTGG +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFERHQT*DFLYGW
Trigger: CCACCCATACAGGAAATCCAAAGTTTGGTGTCTCTC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAATCAGTGTGCACATATTCAAACACAAGTGTCAGCGTCTCCTTGGTATGGATGTTGTCTCCCTCAGGCTaGATTCACCTGGAACTCTTT +
Preference number: 5 (lower is better)
Translates to: KSVCTYSNTSVSVSLVWMLSPSG*IHLELF
Trigger: AAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACAA...CATCCATACCAAGGAGACGCTGACACTTGTGTTTGAATATGTGCACACTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSMHPLY*ISWFLK
Trigger: TTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQTLGDS*PVEEVL
Trigger: TAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AAATATAACGCTGGTGGATGTAAGACAGACCTCGCAGCAACTGAAATAAAAACAAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: KYNAGGCKTDLAATEIKTKVTTS*EYVWLG
Trigger: CCCTAGCCACACATACTCCAACGAAGTGGTTACCTT...TGTTTTTATTTCAGTTGCTGCGAGGTCTGTCTTACATCCACCAGCGTTATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431029.5
CDS-3UTR CAA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGCCATGTGTCCTCATTaGGTGTTCCAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFAMCPH*VFQEPE
Trigger: TTCTGGTTCTTGGAACACCAAATGAGGACACATGGC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTTCTCCAGCTTCTGGTaGCAATCTCACATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: FALAENFLPSGCKMCTALFSSFW*QSHIWD
Trigger: GTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGAA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGCTGCTTGTCAGTGCTaGCTGTTTGATAGACTTTTG +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFAACQC*LFDRLL
Trigger: CAAAAGTCTATCAAACAGCAAGCACTGACAAGCAGC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGATCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATT +
Preference number: 5 (lower is better)
Translates to: REKKQRENMIANRGRREGSQKKS*STWLLI
Trigger: AATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGA...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ACTGGCTGTCATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTAAGACTTCCAGTGGGTaGGAATGTATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: TGCHIHTEERIPRGLTFFKTSSG*ECMKEE
Trigger: TTCCTCTTTCATACATTCCAACCCACTGGAAGTCTT...AAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATATGACAGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAATCAACACAGTCTGAATaGATTTTCATGACTGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKSTQSE*IFMTAH
Trigger: GTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGA...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCATTCTTACCATCTGTTaGAGTTCAGGCTATTCCTTC +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSILTIC*SSGYSF
Trigger: GAAGGAATAGCCTGAACTCAAACAGATGGTAAGAAT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTG +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSDVLRC*YYSYHL
Trigger: CAGATGGTAAGAATAGTACAAACACCTTAGCACATC...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp ATATACACACTGAGGAAAGGATACCAAGAGGCCTCACTTTCTTTGCAAGCCTGGGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTG +
Preference number: 5 (lower is better)
Translates to: IYTLRKGYQEASLSLQAWDVLRC*YYSYHL
Trigger: CAGATGGTAAGAATAGTACAAACACCTTAGCACATC...CCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCCTCAGTGTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CCA 90 bp AATGCAAGCATTGTTCTCAGAATGCACCCTCTTTACTTGATTAGCTaGTTTCTCAAATGGGTCAAAAGTGCTCTGTGTCCTCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: NASIVLRMHPLYLIS*FLKWVKSALCPLNS
Trigger: AGAGTTCAGAGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATTCTGAGAACAATGCTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACATTGTGTCCAGGGGTTaGATCACTGAGTCCATTCCC +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHIVSRG*ITESIP
Trigger: GGGAATGGACTCAGTGATCAAACCCCTGGACACAAT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGAGAAAAGAAGCAGAGGGAGAATATGATTGCAAATAGGGGAAGGAGAGAGGGAATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: REKKQRENMIANRGRREGMHPLY*ISWFLK
Trigger: TTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT...TCCCTCTCTCCTTCCCCTATTTGCAATCATATTCTCCCTCTGCTTCTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAAGGTAACCACTTCGTaGGAGTATGTGTGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHKVTTS*EYVWLG
Trigger: CCCTAGCCACACATACTCCAACGAAGTGGTTACCTT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTACCCTCACCCAACTCTCAGAAAAAGTCCTTGTCAACCTGGCTCCTAATTCCAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 5 (lower is better)
Translates to: FTLTQLSEKVLVNLAPNSSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...GGAATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGAGTTGGGTGAGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCTCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATT +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSQKKS*STWLLI
Trigger: AATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGA...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp GTCAGAGAACAGGGGTTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAATCAACACAGTCTGAATaGATTTTCATGACTGCCCAC +
Preference number: 5 (lower is better)
Translates to: VREQGFALAENFLPSGCKSTQSE*IFMTAH
Trigger: GTGGGCAGTCATGAAAATCAATTCAGACTGTGTTGA...TTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAACCCCTGTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCCCTCAACTCCTTGAGTAAGGGAAGCTGGCCCATTCCCTTTTTCATCTTTAAAAACTTCCCATTTACCTaGCTTTTCCCTTTGTATACT +
Preference number: 5 (lower is better)
Translates to: SLNSLSKGSWPIPFFIFKNFPFT*LFPLYT
Trigger: AGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGTT...TTTAAAGATGAAAAAGGGAATGGGCCAGCTTCCCTTACTCAAGGAGTTGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCGAGCTTATTCCATGCTaGTCTAAGGTTTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFELIPC*SKVFRA
Trigger: AGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTC...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TTTGCTTTAGCAGAAAATTTCCTTCCTAGTGGTTGCAAAATGTGCACTGCTCTCTCTCAGAAAAAGTCCTaGTCAACCTGGCTCCTAATT +
Preference number: 5 (lower is better)
Translates to: FALAENFLPSGCKMCTALSQKKS*STWLLI
Trigger: AATTAGGAGCCAGGTTGACAAGGACTTTTTCTGAGA...GAGAGCAGTGCACATTTTGCAACCACTAGGAAGGAAATTTTCTGCTAAAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAATTCTTACCATCTGTTaGAGTTCAGGCTATTCCTTC +
Preference number: 5 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQAILTIC*SSGYSF
Trigger: GAAGGAATAGCCTGAACTCAAACAGATGGTAAGAAT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS TCA 90 bp TTAAAGTTAATGCAAGCATTGTTCTCAGAATGCACCCTCTTTACTTaGTTAGCTGGTTTCTCAAATGGGTCAAAAGTGCTCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LKLMQALFSECTLFT*LAGFSNGSKVLCVL
Trigger: GAGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATTCTGAGAACAATGCTTGCATTAACTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQMHPLY*ISWFLK
Trigger: TTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGATGGAAGTTATGCGCAATTATGCAGCATATTCCTATGTATAAGGGGCAGGCAAACTTCCCATTTACCTaGCTTTTCCCTTTGTATACT +
Preference number: 5 (lower is better)
Translates to: RWKLCAIMQHIPMYKGQANFPFT*LFPLYT
Trigger: AGTATACAAAGGGAAAAGCAAGGTAAATGGGAAGTT...TGCCTGCCCCTTATACATAGGAATATGCTGCATAATTGCGCATAACTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
CDS-3UTR CAA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCGAGCTTATTCCATGCTaGTCTAAGGTTTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFELIPC*SKVFRA
Trigger: AGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTC...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CTCCACTCCGCAGACAGTACCATTTTAAAGTTTAGGAATTCTGGATCCAGTTTCAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 5 (lower is better)
Translates to: LHSADSTILKFRNSGSSFSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...GAAACTGGATCCAGAATTCCTAAACTTTAAAATGGTACTGTCTGCGGAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp CACTGTACACAAAGGTATTTCCATAGGAATTTGTGTGTAGAGGAGCTAGGTTTCATTCTTACCATCTGTTaGAGTTCAGGCTATTCCTTC +
Preference number: 5 (lower is better)
Translates to: HCTQRYFHRNLCVEELGFILTIC*SSGYSF
Trigger: GAAGGAATAGCCTGAACTCAAACAGATGGTAAGAAT...GAAACCTAGCTCCTCTACACACAAATTCCTATGGAAATACCTTTGTGTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp AGCTGCCTACGACAGGGAGATATAACTCTAATAGCCCTAATTGAAGTCTTTCAAGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTG +
Preference number: 5 (lower is better)
Translates to: SCLRQGDITLIALIEVFQDVLRC*YYSYHL
Trigger: CAGATGGTAAGAATAGTACAAACACCTTAGCACATC...TTGAAAGACTTCAATTAGGGCTATTAGAGTTATATCTCCCTGTCGTAGGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGTAGACATTCTACACTaGGGTGTTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHVDILH*GVFCSL
Trigger: AAGAGAGCAGAAAACACCCAAGTGTAGAATGTCTAC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHMHPLY*ISWFLK
Trigger: TTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGAGCTTATTCCATGCTaGTCTAAGGTTTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHELIPC*SKVFRA
Trigger: AGCTCTAAAAACCTTAGACAAGCATGGAATAAGCTC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACGATGTGCTAAGGTGTTaGTACTATTCTTACCATCTG +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHDVLRC*YYSYHL
Trigger: CAGATGGTAAGAATAGTACAAACACCTTAGCACATC...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS-3UTR CAA 90 bp TCATCCAGCAGATATAGTTCTTTTGCACCAGATTTAAAACATTCTGTTCCTCACAGCAAGATTCCTGCATaGTTTCTAAAACCTGCATTT +
Preference number: 5 (lower is better)
Translates to: SSSRYSSFAPDLKHSVPHSKIPA*FLKPAF
Trigger: AAATGCAGGTTTTAGAAACAATGCAGGAATCTTGCT...GTGAGGAACAGAATGTTTTAAATCTGGTGCAAAAGAACTATATCTGCTGGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS TCA 90 bp GAATTAATCCCATTCACATCTTTGAATTGCTGTTACTGGTATCATTaGAGAAACTTCCTTCTGCTCTTTCTGGAGGATCTCTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: ELIPFTSLNCCYWYH*RNFLLLFLEDLFSI
Trigger: AATTGAAAAGAGATCCTCCAGAAAGAGCAGAAGGAAGTTTCTTCAATGATACCAGTAACAGCAATTCAAAGATGTGAATGGGATTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449528.5
CDS TCA 72 bp TCATCTTGCCGATCTTCTCGGCCGGCTGCGGCTCAATaGGGTCACACATCTGGGCGACGCGGAGCCCCGACA +
Preference number: 6 (lower is better)
Translates to: SSCRSSRPAAAQ*GHTSGRRGAPT
Trigger: TGTCGGGGCTCCGCGTCGCCCAGATGTGTGACCTCATTGAGCCGCAGCCGGCCGAGAAGATCGGCAAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS CCA 72 bp TTCTCGGCCGGCTGCGGCTCAATGAGGTCACACATCTaGGCGACGCGGAGCCCCGACAACTTCCCCAAACTG +
Preference number: 6 (lower is better)
Translates to: FSAGCGSMRSHI*ATRSPDNFPKL
Trigger: CAGTTTGGGGAAGTTGTCGGGGCTCCGCGTCGCCCAGATGTGTGACCTCATTGAGCCGCAGCCGGCCGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380050.8
CDS GCA 72 bp CCACGAAGGCAGAGTAACCGGGCTCTGCAGCAGCATTaGAGCCAAAGTAACCGTGCATATGCTGTCAAGGCA +
Preference number: 6 (lower is better)
Translates to: PRRQSNRALQQH*SQSNRAYAVKA
Trigger: TGCCTTGACAGCATATGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265741.7
ENST00000496279.5
CDS GCA 72 bp CTGTGGAGTTCCCACGAAGGCAGAGTAACCGGGCTCTaGAGCAGCATTGCAGCCAAAGTAACCGTGCATATG +
Preference number: 6 (lower is better)
Translates to: LWSSHEGRVTGL*SSIAAKVTVHM
Trigger: CATATGCACGGTTACTTTGGCTGCAATGCTGCTGCAGAGCCCGGTTACTCTGCCTTCGTGGGAACTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265741.7
ENST00000406263.5
ENST00000496279.5
CDS GCA 72 bp CTACCAACTTCCCATTTACCCGAGCTGGGGCTGGAGTaGCGCCTAACTTTAGGTGACTCTTTGCCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: LPTSHLPELGLE*RLTLGDSLPVE
Trigger: CTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTCGGGTAAATGGGAAGTTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431029.5
ENST00000436577.3
CDS CCA 72 bp TCCCATAGCCGTGGCGGCAGGTCACTAAAATACTCGTaGCTCAAGGCAGCCTGTGCCGACAGTCTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SHSRGGRSLKYS*LKAACADSLFF
Trigger: AAAGAACAGACTGTCGGCACAGGCTGCCTTGAGCCACGAGTATTTTAGTGACCTGCCGCCACGGCTATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CAA 90 bp GTTGGCGAGCTGGGGCTGGAGTGCCGCCTAACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTAAAGTTAATGCAAGCATTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: VGELGLECRLTLGDS*PVEEVLKLMQALFS
Trigger: TGAGAACAATGCTTGCATTAACTTTAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTCGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS GCA 72 bp TCCCTGATAGCTGTGAAAGGTGTCCCTTCTTCTTCCTaGAGCCTGATCACCTTCAGAGCTACCAACTTCCCA +
Preference number: 6 (lower is better)
Translates to: SLIAVKGVPSSS*SLITFRATNFP
Trigger: TGGGAAGTTGGTAGCTCTGAAGGTGATCAGGCTGCAGGAAGAAGAAGGGACACCTTTCACAGCTATCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000431029.5
ENST00000436577.3
CDS CAA 90 bp TTACCCGAGCTGGGGCTGGAGTGCCGCCTAACTTTAGGTGACTCTTaGCCAGTGGAGGAGGTCTTAAAGTTAATGCAAGCATTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: LPELGLECRLTLGDS*PVEEVLKLMQALFS
Trigger: TGAGAACAATGCTTGCATTAACTTTAAGACCTCCTCCACTGGCAAAGAGTCACCTAAAGTTAGGCGGCACTCCAGCCCCAGCTCGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431029.5
ENST00000436577.3
CDS GCA 72 bp GGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTGTG +
Preference number: 6 (lower is better)
Translates to: GQAHTATEFTSF*TSKLKWYGRTV
Trigger: CACAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496279.5
CDS TCA 72 bp CAGCAACTGAATTCACATCTTTCTGCACTAGCAAGCTaGAATGGTACGGCCGTACTACAACCAAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: QQLNSHLSALAS*NGTAVLQPREG
Trigger: CCCCTCTCTTGGTTGTAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS TCA 72 bp CAGCAACTGAATTCACATCTTTCTGCACTAGCAAGCTaGAATGGTACGGCCGTACTGTGGAGTTCCCACGAA +
Preference number: 6 (lower is better)
Translates to: QQLNSHLSALAS*NGTAVLWSSHE
Trigger: TTCGTGGGAACTCCACAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496279.5
CDS GCA 72 bp GGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTACA +
Preference number: 6 (lower is better)
Translates to: GQAHTATEFTSF*TSKLKWYGRTT
Trigger: TGTAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406263.5
CDS GCA 72 bp GGCCAGGCTCATACAGCAACTGAATTCACATCTTTCTaGACTAGCAAGCTGAAATGGTACGGCCGTACTCAT +
Preference number: 6 (lower is better)
Translates to: GQAHTATEFTSF*TSKLKWYGRTH
Trigger: ATGAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446790.5
CDS CAA 72 bp CACCTCAGGATCAAAGAGCCAGGCAGAGCCAACACTTaGTTCTGGCAATCATCAAAGCTCATCAAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: HLRIKEPGRANT*FWQSSKLIKGG
Trigger: ACCACCTTTGATGAGCTTTGATGATTGCCAGAACAAAGTGTTGGCTCTGCCTGGCTCTTTGATCCTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456689.5
CDS CAA 90 bp GAAGGAAGTCACCTCAGGATCAAAGAGCCAGGCAGAGCCAACACTTaGTTCTGGCAATCATCAAAGCTCATCAAAGGTGGTGTCATCTTT +
Preference number: 6 (lower is better)
Translates to: EGSHLRIKEPGRANT*FWQSSKLIKGGVIF
Trigger: AAAGATGACACCACCTTTGATGAGCTTTGATGATTGCCAGAACAAAGTGTTGGCTCTGCCTGGCTCTTTGATCCTGAGGTGACTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456689.5
CDS CCA 72 bp ATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATC +
Preference number: 6 (lower is better)
Translates to: IVSRGLITESIP*QFRVDIFVTHI
Trigger: GATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000478540.1
ENST00000496279.5
CDS GCA 72 bp GACACATATCTACTTGTGAAGTACTTCATGGAAAGCTaGAGCGTCACAACCCTGGCAGAGAATCAGAATCAC +
Preference number: 6 (lower is better)
Translates to: DTYLLVKYFMES*SVTTLAENQNH
Trigger: GTGATTCTGATTCTCTGCCAGGGTTGTGACGCTGCAGCTTTCCATGAAGTACTTCACAAGTAGATATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446224.5
CDS CCA 72 bp ATTGTGTCCAGGGGTTTGATCACTGAGTCCATTCCCTaGCAGTTCCGTGTAGACATCTTTGTGACACATATT +
Preference number: 6 (lower is better)
Translates to: IVSRGLITESIP*QFRVDIFVTHI
Trigger: AATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGACTCAGTGATCAAACCCCTGGACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456689.5
CDS CAA 72 bp CACCTGGAACTCTTTAACATGTCTCTAGCAATGTGTTaGCACCAGGCCAGGCTCATACAGCAACTGAATTCA +
Preference number: 6 (lower is better)
Translates to: HLELFNMSLAMC*HQARLIQQLNS
Trigger: TGAATTCAGTTGCTGTATGAGCCTGGCCTGGTGCAAACACATTGCTAGAGACATGTTAAAGAGTTCCAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406263.5
ENST00000436577.3
ENST00000446790.5
ENST00000496279.5
CDS CAA 72 bp GTGACACATATCAAAGAGCCAGGCAGAGCCAACACTTaGTTCTGGCAATCATCAAAGCTCATCAAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: VTHIKEPGRANT*FWQSSKLIKGG
Trigger: ACCACCTTTGATGAGCTTTGATGATTGCCAGAACAAAGTGTTGGCTCTGCCTGGCTCTTTGATATGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430760.5
CDS CAA 90 bp ATCCTGTGTGCTCTTGAGAATGTGCTGCTTGTCAGTGCTTGCTGTTaGATAGACTTTTGCCATAACTATTGTTTTTCCCAAAGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: ILCALENVLLVSACC*IDFCHNYCFSQRPA
Trigger: TGCGGGCCTTTGGGAAAAACAATAGTTATGGCAAAAGTCTATCAAACAGCAAGCACTGACAAGCAGCACATTCTCAAGAGCACACAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CAA 90 bp GGCTTGATTCACCTGGAACTCTTTAACATGTCTCTAGCAATGTGTTaGCACCAGGCCAGGCTCATACAGCAACTGAATTCACATCTTTCT +
Preference number: 6 (lower is better)
Translates to: GLIHLELFNMSLAMC*HQARLIQQLNSHLS
Trigger: AGAAAGATGTGAATTCAGTTGCTGTATGAGCCTGGCCTGGTGCAAACACATTGCTAGAGACATGTTAAAGAGTTCCAGGTGAATCAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406263.5
ENST00000436577.3
ENST00000446790.5
ENST00000496279.5
CDS TCA 72 bp AGGGTAAAGCGTTCTGGCTTAAAATGTGGTAAAGAATaGACTCCAGGCCATGTGTCCTCATTTGGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: RVKRSGLKCGKE*TPGHVSSFGVP
Trigger: TGGAACACCAAATGAGGACACATGGCCTGGAGTTCATTCTTTACCACATTTTAAGCCAGAACGCTTTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS TCA 72 bp CAGCAACTGAATTCACATCTTTCTGCACTAGCAAGCTaGAATGGTACGGCCGTACTCATCATGCTCAATTCA +
Preference number: 6 (lower is better)
Translates to: QQLNSHLSALAS*NGTAVLIMLNS
Trigger: TGAATTGAGCATGATGAGTACGGCCGTACCATTTCAGCTTGCTAGTGCAGAAAGATGTGAATTCAGTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446790.5
CDS GCA 72 bp TTCCATTTTACACAGTTCCTTGAGCATGAGAGGACATaGTTACCTCAGAGTGTAGGGTTAGGAAGGATGCTT +
Preference number: 6 (lower is better)
Translates to: FHFTQFLEHERT*LPQSVGLGRML
Trigger: AAGCATCCTTCCTAACCCTACACTCTGAGGTAAGCATGTCCTCTCATGCTCAAGGAACTGTGTAAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460493.1
CDS CCA 72 bp ATGCACCCTCTTTACTTGATTAGCTGGTTTCTCAAATaGGTCAAAAGTGCTCTGTGTCCTCTGAACTCTGAC +
Preference number: 6 (lower is better)
Translates to: MHPLYLISWFLK*VKSALCPLNSD
Trigger: GTCAGAGTTCAGAGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS CCA 72 bp GTTTTTCCCAAAGGCCCGCATGCTTTCTCCAGCTTCTaGTTGCAATCTCACATTTGGGACAGTAAAAATAGA +
Preference number: 6 (lower is better)
Translates to: VFPKGPHAFSSF*LQSHIWDSKNR
Trigger: TCTATTTTTACTGTCCCAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CAA 72 bp GTGACACATATCGTTTTGCTGTTGTCTCCCTCAGGCTaGATTCACCTGGAACTCTTTAACATGTCTCTAGCA +
Preference number: 6 (lower is better)
Translates to: VTHIVLLLSPSG*IHLELFNMSLA
Trigger: TGCTAGAGACATGTTAAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACAACAGCAAAACGATATGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406263.5
ENST00000431029.5
ENST00000436577.3
ENST00000446790.5
ENST00000496279.5
CDS CAA 90 bp GACATCTTTGTGACACATATCAAAGAGCCAGGCAGAGCCAACACTTaGTTCTGGCAATCATCAAAGCTCATCAAAGGTGGTGTCATCTTT +
Preference number: 6 (lower is better)
Translates to: DIFVTHIKEPGRANT*FWQSSKLIKGGVIF
Trigger: AAAGATGACACCACCTTTGATGAGCTTTGATGATTGCCAGAACAAAGTGTTGGCTCTGCCTGGCTCTTTGATATGTGTCACAAAGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430760.5
CDS GCA 72 bp TTTTGCCATAACTATTGTTTTTCCCAAAGGCCCGCATaGTTTCTCCAGCTTCTGGTTGCAATCTCACATTTG +
Preference number: 6 (lower is better)
Translates to: FCHNYCFSQRPA*FLQLLVAISHL
Trigger: CAAATGTGAGATTGCAACCAGAAGCTGGAGAAAGCATGCGGGCCTTTGGGAAAAACAATAGTTATGGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000436577.3
CDS CAA 90 bp GACATCTTTGTGACACATATCGTTTTGCTGTTGTCTCCCTCAGGCTaGATTCACCTGGAACTCTTTAACATGTCTCTAGCAATGTGTTTG +
Preference number: 6 (lower is better)
Translates to: DIFVTHIVLLLSPSG*IHLELFNMSLAMCL
Trigger: CAAACACATTGCTAGAGACATGTTAAAGAGTTCCAGGTGAATCAAGCCTGAGGGAGACAACAGCAAAACGATATGTGTCACAAAGATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406263.5
ENST00000431029.5
ENST00000436577.3
ENST00000446790.5
ENST00000496279.5
CDS CAA 90 bp CTTAAAGTTAATGCAAGCATTGTTCTCAGAATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAATGGGTCAAAAGTGCTCTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: LKVNASIVLRMHPLY*ISWFLKWVKSALCP
Trigger: AGGACACAGAGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATTCTGAGAACAATGCTTGCATTAACTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS TCA 72 bp ACAAGTGTCAGCGTCTCCTTGGTATGGATGATGTCATaGAGTAGCACTATGTTAGCATGTTTTAGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: TSVSVSLVWMMS*SSTMLACFSPF
Trigger: AAAAGGACTAAAACATGCTAACATAGTGCTACTTCATGACATCATCCATACCAAGGAGACGCTGACACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000431029.5
ENST00000436577.3
ENST00000487145.1
CDS CAA 72 bp AATGCAAGCATTGTTCTCAGAATGCACCCTCTTTACTaGATTAGCTGGTTTCTCAAATGGGTCAAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: NASIVLRMHPLY*ISWFLKWVKSA
Trigger: AGCACTTTTGACCCATTTGAGAAACCAGCTAATCAAGTAAAGAGGGTGCATTCTGAGAACAATGCTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265741.7
ENST00000380050.8
ENST00000406263.5
ENST00000430760.5
ENST00000431029.5
ENST00000436577.3
ENST00000446224.5
ENST00000446790.5
ENST00000449528.5
ENST00000456689.5
ENST00000478540.1
CDS CAA 72 bp ATCTTTGTGACACATATTAGGGTTTATTTGGTAGCTTaGGAGGAAAAACTTAGAAGGAAGTCACCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: IFVTHIRVYLVA*EEKLRRKSPQD
Trigger: ATCCTGAGGTGACTTCCTTCTAAGTTTTTCCTCCAAAGCTACCAAATAAACCCTAATATGTGTCACAAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456689.5