RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDK12 (Homo sapiens)

Ensembl gene IDs: ENSG00000167258

Ensembl transcript IDs: ENST00000430627.6, ENST00000447079.6, ENST00000558240.1, ENST00000559545.5, ENST00000559663.1, ENST00000581593.1, ENST00000581963.1, ENST00000584336.1, ENST00000584632.5, ENST00000585161.1

Found 768 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTaGGCATTGGGGATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCT +
Preference number: 1 (lower is better)
Translates to: KKGGGRHRRLVTCPI*ALGMKEAGLQASNS
Trigger: AGAATTAGAGGCCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR TCA 90 bp CAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTTTCACATTTaGGCTGCTGCATGTGCTGTCTGGATTGCAGGGATGAGAGAGGCA +
Preference number: 1 (lower is better)
Translates to: QDSNDFPSLGLVFHI*AAACAVWIAGMREA
Trigger: TGCCTCTCTCATCCCTGCAATCCAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR TCA 90 bp CTGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTaGGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGA +
Preference number: 1 (lower is better)
Translates to: LVPTSLFRKSPASSK*ARNTTDSFAVAKCR
Trigger: TCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR TCA 90 bp TCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATaGTTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SPNPGTQSNTRTGFK*FPLSGSCFSHLSCC
Trigger: GCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR GCA 90 bp ATCTCTTTGGAGGAAAAATCCCTAAAAGAACTGGCAGGGTACACATaGTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGC +
Preference number: 1 (lower is better)
Translates to: ISLEEKSLKELAGYT*WDVGMSILFFLTVC
Trigger: GCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTGTACCCTGCCAGTTCTTTTAGGGATTTTTCCTCCAAAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR CCA 90 bp TCTTTGGAGGAAAAATCCCTAAAAGAACTGGCAGGGTACACATGCTaGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGT +
Preference number: 1 (lower is better)
Translates to: SLEEKSLKELAGYTC*DVGMSILFFLTVCC
Trigger: ACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTGTACCCTGCCAGTTCTTTTAGGGATTTTTCCTCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR TCA 90 bp GGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAAGGTTCAGATaGACTTTAATGCGATTTACCAATAGCATGTCAGTAAGCCTAGTA +
Preference number: 1 (lower is better)
Translates to: GPCLRTKKSTDRRFR*TLMRFTNSMSVSLV
Trigger: TACTAGGCTTACTGACATGCTATTGGTAAATCGCATTAAAGTTCATCTGAACCTTCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR CCA 90 bp AACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCGCTCTaGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: NGQLCSSQMQMITSL*QMISLKIQRTGWKD
Trigger: ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR CAA 90 bp GGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATaGGGGATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTC +
Preference number: 2 (lower is better)
Translates to: GGGRHRRLVTCPIWA*GMKEAGLQASNSGV
Trigger: GACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR TCA 90 bp GCAAGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGGTGGGATTTCCCACTaGACCTGGCTTGGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: ASKKGGGRHRRLVTCPIWGGISH*TWLGFR
Trigger: CCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCACC...CCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR CAA 90 bp CTGGTGACCTGTCCCATCTGGGCATTGGGGATGAAGGAAGCAGGCTaGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGT +
Preference number: 2 (lower is better)
Translates to: LVTCPIWALGMKEAG*QASNSGVSHSVWTG
Trigger: ACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGATGGGACAGGTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR TCA 90 bp AGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACTTTGCCAGGCTCTGGGTaGGAGGTGACTGATGGACAT +
Preference number: 2 (lower is better)
Translates to: RPLILVSHTVFGQVGFPTLPGSG*EVTDGH
Trigger: ATGTCCATCAGTCACCTCTCACCCAGAGCCTGGCAA...AGTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR TCA 90 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTGCTGTCTGGCTCTGGGTGAGAGGTaGCTGATGGACATCACTGCA +
Preference number: 2 (lower is better)
Translates to: FPLSGSCFSHLSCCMCCLALGER*LMDITA
Trigger: TGCAGTGATGTCCATCAGTCACCTCTCACCCAGAGC...CAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCCTGCTAGTAGCAAGTaGGCAAGGAATACAACGGAC +
Preference number: 2 (lower is better)
Translates to: NVLAIAHPGGTGANIIISPASSK*ARNTTD
Trigger: GTCCGTTGTATTCCTTGCTCACTTGCTACTAGCAGG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGACAACCTGCTTTATGTaGAGGGAGAAGGGCGTATCT +
Preference number: 2 (lower is better)
Translates to: AVISPLGMEASSLTTAQQTTCFM*REKGVS
Trigger: AGATACGCCCTTCTCCCTGCACATAAAGCAGGTTGT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCCATCCAGGGGGAACTaGTGCCAACATCATTATTTC +
Preference number: 2 (lower is better)
Translates to: AVISPLGMEASSLTTAQQPSRGN*CQHHYF
Trigger: GAAATAATGATGTTGGCACCAGTTCCCCCTGGATGG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCGCAGGGTACACATGCTaGGATGTGGGTATGTCAATA +
Preference number: 2 (lower is better)
Translates to: DTPNGGQKRERKESVSGTAGYTC*DVGMSI
Trigger: TATTGACATACCCACATCCCAGCATGTGTACCCTGC...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CCA 90 bp CAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTGCTGCATGTGCTGTCTaGATTGCAGGGATGAGAGAG +
Preference number: 2 (lower is better)
Translates to: QIQEHKAIPGQDSNDFPSAACAV*IAGMRE
Trigger: CTCTCTCATCCCTGCAATCCAGACAGCACATGCAGC...AGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTCAAAGAGCCTCTCCTaGGCCATCTCAATACTGAAA +
Preference number: 2 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSKSLS*AISILK
Trigger: TTTCAGTATTGAGATGGCTCAGGAGAGGCTCTTTGA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR TCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCAACTGACACTTTTCTaGTGCAGCATTCTCTCTCAA +
Preference number: 2 (lower is better)
Translates to: DTPNGGQKRERKESVSGTQLTLF*CSILSQ
Trigger: TTGAGAGAGAATGCTGCATCAGAAAAGTGTCAGTTG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTACAACGGACAGCTTTaGAGTAGCCAAATGCAGATG +
Preference number: 2 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILYNGQL*SSQMQM
Trigger: CATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR CCA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCGTGACCTGTCCCATCTaGGCATTGGGGATGAAGGAA +
Preference number: 2 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISVTCPI*ALGMKE
Trigger: TTCCTTCATCCCCAATGCCCAGATGGGACAGGTCAC...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTACAACGGACAGCTTTaGAGTAGCCAAATGCAGATG +
Preference number: 2 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLYNGQL*SSQMQM
Trigger: CATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCTCCAGGGGGAACTGGTaGCAACATCATTATTTCGTA +
Preference number: 2 (lower is better)
Translates to: IEIEARMRSLPNYPILTASRGNW*QHHYFV
Trigger: TACGAAATAATGATGTTGGCACCAGTTCCCCCTGGA...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CCA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCAGTGTTTGGACAGGTaGGATTTCCCACTGAACCTG +
Preference number: 2 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISQCLDR*DFPLNL
Trigger: CAGGTTCAGTGGGAAATCCCACCTGTCCAAACACTG...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCAACTGGATGGAAGGATaGATAGGAAAGGAATCTTTC +
Preference number: 2 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITNWMEG*IGKESF
Trigger: GAAAGATTCCTTTCCTATCCATCCTTCCATCCAGTT...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAAAAGATTCAGAGAACTaGATGGAAGGATGGATAGGA +
Preference number: 2 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGKDSEN*MEGWIG
Trigger: TCCTATCCATCCTTCCATCCAGTTCTCTGAATCTTT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGTAGCCAAATGCAGATaGTTACCTCGCTCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQVAKCR*LPRSGK
Trigger: TTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTAC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR TCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAGTAGCCAAATGCAGATaGTTACCTCGCTCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRVAKCR*LPRSGK
Trigger: TTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTAC...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAAACTGGATGGAAGGATaGATAGGAAAGGAATCTTTC +
Preference number: 2 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRNWMEG*IGKESF
Trigger: GAAAGATTCCTTTCCTATCCATCCTTCCATCCAGTT...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAAAGATTCAGAGAACTaGATGGAAGGATGGATAGGA +
Preference number: 2 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQKDSEN*MEGWIG
Trigger: TCCTATCCATCCTTCCATCCAGTTCTCTGAATCTTT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR CCA 72 bp GGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTaGGCATTGGGGATGAAGGAAGCAGGCTTGCAGGCC +
Preference number: 3 (lower is better)
Translates to: GGRHRRLVTCPI*ALGMKEAGLQA
Trigger: GGCCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR GCA 72 bp TCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTaGTGTCTGGATTGCAGGGATGAGAGAGGCACTGCA +
Preference number: 3 (lower is better)
Translates to: SGSCFSHLSCCM*CLDCRDERGTA
Trigger: TGCAGTGCCTCTCTCATCCCTGCAATCCAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR GCA 72 bp CTACCTACTTGCCCAAGAATGCCACGTTCTACAACCTaGTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: LPTCPRMPRSTT*FMCREKGVSFV
Trigger: GACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGGTTGTAGAACGTGGCATTCTTGGGCAAGTAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR GCA 72 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTaGTGCATGTGCTGTCTGGATTGCAGGGATGAGAGA +
Preference number: 3 (lower is better)
Translates to: FPLSGSCFSHLS*CMCCLDCRDER
Trigger: TCTCTCATCCCTGCAATCCAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCGTAAAGTCTACCTACTaGCCCAAGAATGCCACGTTC +
Preference number: 3 (lower is better)
Translates to: DTPNGGQKRERKESVSGTVKSTY*PKNATF
Trigger: GAACGTGGCATTCTTGGGCAAGTAGGTAGACTTTAC...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CAA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCTGTCCCATCTGGGCATaGGGGATGAAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISCPIWA*GMKEAG
Trigger: GCCTGCTTCCTTCATCCCCAATGCCCAGATGGGACA...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCACACATACAAGTGGTaGGGTGATGTCTATGGCATA +
Preference number: 3 (lower is better)
Translates to: DTPNGGQKRERKESVSGTHTYKW*GDVYGI
Trigger: TATGCCATAGACATCACCCAACCACTTGTATGTGTG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR GCA 72 bp AAATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTaGCAACATCATTATTTCGTAAGTCGCCTGCTAGTA +
Preference number: 3 (lower is better)
Translates to: KCSGYSPSRGNW*QHHYFVSRLLV
Trigger: TACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR CCA 72 bp AGTAAATGTTCTGGCTATAGCCCATCCAGGGGGAACTaGTGCCAACATCATTATTTCGTAAGTCGCCTGCTA +
Preference number: 3 (lower is better)
Translates to: SKCSGYSPSRGN*CQHHYFVSRLL
Trigger: TAGCAGGCGACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR-3UTR CAA 90 bp ACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTTGTCTCACACAGTGTTaGGACAGGTGGGATTTCCCA +
Preference number: 3 (lower is better)
Translates to: TKQYQDRIQMISPLWVLFCLTQC*DRWDFP
Trigger: TGGGAAATCCCACCTGTCCAAACACTGTGTGAGACA...AAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR TCA 72 bp ACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTaGGCAAGGAATACAACGGACAGCTTTGCAGTAGCC +
Preference number: 3 (lower is better)
Translates to: TSLFRKSPASSK*ARNTTDSFAVA
Trigger: GGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR GCA 72 bp GAGGAAAAATCCCTAAAAGAACTGGCAGGGTACACATaGTGGGATGTGGGTATGTCAATACTGTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: EEKSLKELAGYT*WDVGMSILFFL
Trigger: GAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTGTACCCTGCCAGTTCTTTTAGGGATTTTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR-3UTR CAA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCCACTGAACCTGGCTaGGCTTTAGGTTCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISPTEPG*ALGSVK
Trigger: TTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGG...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR CCA 72 bp GAAAAATCCCTAAAAGAACTGGCAGGGTACACATGCTaGGATGTGGGTATGTCAATACTGTTCTTCCTCACA +
Preference number: 3 (lower is better)
Translates to: EKSLKELAGYTC*DVGMSILFFLT
Trigger: TGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTGTACCCTGCCAGTTCTTTTAGGGATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR CCA 72 bp CAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTaGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTG +
Preference number: 3 (lower is better)
Translates to: QYQDRIQMISPL*VLFFTFELLHV
Trigger: CACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
3UTR CCA 72 bp CTTTGCAGTAGCCAAATGCAGATGATTACCTCGCTCTaGCAAATGATTTCATTAAAGATTCAGAGAACTGGA +
Preference number: 3 (lower is better)
Translates to: LCSSQMQMITSL*QMISLKIQRTG
Trigger: TCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
3UTR TCA 72 bp CTGAGGACTAAGAAGTCAACAGACAGAAGGTTCAGATaGACTTTAATGCGATTTACCAATAGCATGTCAGTA +
Preference number: 3 (lower is better)
Translates to: LRTKKSTDRRFR*TLMRFTNSMSV
Trigger: TACTGACATGCTATTGGTAAATCGCATTAAAGTTCATCTGAACCTTCTGTCTGTTGACTTCTTAGTCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp GCAAGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGACACAGGAGGCTGGTaGCCTGTCCCATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ASKKGGGRHRRLVTCPIWDTGGW*PVPSGH
Trigger: ATGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTC...CCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp AAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATTGGGGGTCTCTGAGTCCTGCTaGTGGGAAGTAGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: KGGGRHRRLVTCPIWALGVSESC*WEVASV
Trigger: GACGGAAGCTACTTCCCAGCAGCAGGACTCAGAGAC...CCCCAATGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATTGCCAGGCTCTGGGTaGGAGGTGACTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWALPGSG*EVTDGH
Trigger: ATGTCCATCAGTCACCTCTCACCCAGAGCCTGGCAA...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GCAAGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATGTCAGCTGGTGTaGTTGAAGCTTCAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: ASKKGGGRHRRLVTCPIWACQLV*LKLQGS
Trigger: CGACCCTTGAAGCTTCAAGCACACCAGCTGACATGC...CCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCAGCTGCATGTGCTGTCTaGATTGCAGGGATGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWAAACAV*IAGMRE
Trigger: CTCTCTCATCCCTGCAATCCAGACAGCACATGCAGC...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCCCCAGACTCCACCTTaGCAGGAGCAGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQPQTPP*QEQAEV
Trigger: CACCTCAGCCTGCTCCTGGCAAGGTGGAGTCTGGGG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCCAGCTCTGGGGCCCTaGGAGGACTACGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLPALGP*EDYAGP
Trigger: AGGGCCCGCGTAGTCCTCGCAGGGCCCCAGAGCTGG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCTGCTCCTGAGCTGCTaGCCCCAGTGGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLLLSC*PQWFLA
Trigger: GGCCAGGAACCACTGGGGCCAGCAGCTCAGGAGCAG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCTGCTCCTGAGCTGCTaGCCCCAGTGGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTLLLSC*PQWFLA
Trigger: GGCCAGGAACCACTGGGGCCAGCAGCTCAGGAGCAG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCAGTCTCACACAGTGTTTaGACAGGTGGGATTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWAVSHSV*TGGISH
Trigger: GTGGGAAATCCCACCTGTCCAAACACTGTGTGAGAC...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp ATCTGGGCATTGGGGATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCGTCAGCTGGTGTGCTTaGAGCTTCAAGGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: IWALGMKEAGLQASNSGVVSWCA*SFKGRL
Trigger: CAGACGACCCTTGAAGCTTCAAGCACACCAGCTGAC...GACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTGTGCCCAGGGATGCTaGTTCGGGGGTCACCAACCC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISCAQGC*FGGHQP
Trigger: GGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGGCTCGGTGACCGGGTaGTGGACTGGTAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILGSVTG*WTGRPK
Trigger: CTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGGCTCGGTGACCGGGTaGTGGACTGGTAGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGGSVTG*WTGRPK
Trigger: CTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGGGGGCCTCTTCTCTaGTGCCTCCTCCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRGPLL*CLLLWH
Trigger: ATGCCACAGGAGGAGGCAGCAGAGAAGAGGCCCCCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430627.6
CDS-3UTR GCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGGCCTGCTCCTGAGCTaGTGGCCCCAGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGGLLLS*WPQWFL
Trigger: CAGGAACCACTGGGGCCAGCAGCTCAGGAGCAGGCC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGACCGTTGCTCCTACCTaGTGCCTCCTCCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RKQACRPLILVSHTVFGQTVAPT*CLLLWH
Trigger: ATGCCACAGGAGGAGGCAGCAGGTAGGAGCAACGGT...CTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQPPVAL*EFFGAP
Trigger: AGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAGCCGACTCCAGCTCTaGGGCCCTGCGAGGACTACG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSRLQL*GPARTT
Trigger: CGTAGTCCTCGCAGGGCCCCAGAGCTGGAGTCGGCT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGCGGTCGCTCCGATCTaGTCCACGACGTTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSAVAPI*STTFVV
Trigger: AACGACGAACGTCGTGGATCAGATCGGAGCGACCGC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGCGGTCGCTCCGATCTaGTCCACGACGTTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISAVAPI*STTFVV
Trigger: AACGACGAACGTCGTGGATCAGATCGGAGCGACCGC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGACTGTAGGGGCTCGGTaGCCGGGTGCTGGACTGGTA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILTVGAR*PGAGLV
Trigger: TACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCGGTCGTCTGTTCTGCTaGAGGCAGGATCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTGRLFC*RQDHWG
Trigger: GCCCCAGTGATCCTGCCTTCAGCAGAACAGACGACC...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGGGAGGTCCAGGAAGTaGGAAGCCGACGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDGRSRK*EADGPG
Trigger: CCCCGGGCCGTCGGCTTCTCACTTCCTGGACCTCCC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGTGCCCAGGGATGCTaGTTCGGGGGTCACCAACCC +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILCAQGC*FGGHQP
Trigger: GGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGCAGGCTGAGGTGGTaGTGGGCTGCTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQSRLRW*WAAVLH
Trigger: GTGAAGAACAGCAGCCCAGCACCACCTCAGCCTGCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCCCCAGACTCCACCTTaGCAGGAGCAGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITPQTPP*QEQAEV
Trigger: CACCTCAGCCTGCTCCTGGCAAGGTGGAGTCTGGGG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCAAGGTCGGTTTGGCTCTaGAGCAGGTTTAATAACACT +
Preference number: 4 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWARSVWL*SRFNNT
Trigger: AGTGTTATTAAACCTGCTGCAGAGCCAAACCGACCT...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTCCCTTCTACATGAGGTaGGGGGTGAAGGAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSPFYMR*GVKERG
Trigger: CCCTCGCTCCTTCACCCCCCACCTCATGTAGAAGGG...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTCCTGTGGGGGCTCCTaGATCTCCGTTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQSCGGS*ISVLGC
Trigger: ACAGCCCAAAACGGAGATCCAGGAGCCCCCACAGGA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTTCGACCATAGGGACTaGGCGATCGCCCGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQFDHRD*AIARCK
Trigger: CTTACAGCGGGCGATCGCCCAGTCCCTATGGTCGAA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGGAGCAGGCTGAGGTaGTGCTGGGCTGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRSRLR*CWAAVL
Trigger: AAGAACAGCAGCCCAGCACCACCTCAGCCTGCTCCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGGGATTTCCCACTGAACCTGGCTTGGCTTTAGGTTCTGTGAAAGAGACTGAACCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGFPTEPGLALGSVKETEPPVAL*EFFGAP
Trigger: AGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGG...TTCAGTCTCTTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGCTGGGTTCAACTCCTaGGGGGCGCTGGAAAGATCG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSAGFNS*GALERS
Trigger: CGATCTTTCCAGCGCCCCCCAGGAGTTGAACCCAGC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGGCCTGGTGCTCATGTaGCAGGTGGCCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLGLVLM*QVARRL
Trigger: GAGCCTCCTGGCCACCTGCCACATGAGCACCAGGCC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTGCCCTGGTAACTGCTaGACTCCCCAAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQCPGNC*TPQGGS
Trigger: TGAGCCACCTTGGGGAGTCCAGCAGTTACCAGGGCA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCTTCCCCCTCTTGGTaGGACTCTTGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSSPSW*DSCRPP
Trigger: CGGGGGCCTACAAGAGTCCCACCAAGAGGGGGAAGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGCTGCCGCCTCCCGATaGCGGCTGCAAAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLAAASR*RLQSSR
Trigger: TCTGGAACTTTGCAGCCGTCATCGGGAGGCGGCAGC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCGCCTGTGCTGGTGGTaGCGATGTTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLRLCWW*RCLCRR
Trigger: CCGCCTGCACAAACATCGTCACCACCAGCACAGGCG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACTAGCAGCTGTGCCATTTaGGGGATGCTCAGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: RPLILVSHTVFGQVGFPTSSCAI*GMLRSV
Trigger: AACCGACCTGAGCATCCCTCAAATGGCACAGCTGCT...AGTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp AGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACTCTTCCGTCAGGGCACTaGTGGATTGGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RPLILVSHTVFGQVGFPTLPSGH*WIGSGL
Trigger: AAGCCCTGAACCAATCCATCAGTGCCCTGACGGAAG...AGTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCGCTCTGGGTGAGAGGTaGCTGATGGACATCACTGCA +
Preference number: 4 (lower is better)
Translates to: LQASNSGVSHSVWTGGISALGER*LMDITA
Trigger: TGCAGTGATGTCCATCAGTCACCTCTCACCCAGAGC...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCGGTGGGATTTCCCACTaGACCTGGCTTGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LQASNSGVSHSVWTGGISGGISH*TWLGFR
Trigger: CCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCACC...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTAACTGTGCCCAGGGATaGTGCTTCGGGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSNCAQG*CFGGHQ
Trigger: TTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSDSETA*SGKGCW
Trigger: CCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGAGGTGGTGCTGGGCTaGTGTTCTTCACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISEVVLG*CSSQAQ
Trigger: CTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTTCAGGGCTTCCAGCTaGTGCTGCATCTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQFRASS*CCISGL
Trigger: CAACCCAGAGATGCAGCAGCAGCTGGAAGCCCTGAA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGTTCAGGGCTTCCAGCTaGTGCTGCATCTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: MKEAGLQASNSGVSHSVWFRASS*CCISGL
Trigger: CAACCCAGAGATGCAGCAGCAGCTGGAAGCCCTGAA...CCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp CAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACATGGTCTCTGAGTCCTaGTGCTGGGAAGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QASNSGVSHSVWTGGISHMVSES*CWEVAS
Trigger: GGAAGCTACTTCCCAGCAGCAGGACTCAGAGACCAT...GTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCACTGGGGCAGAGGGTaGTTCCTTCAAAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQHWGRG*FLQRLL
Trigger: GAGGAGTCTTTGAAGGAAGCACCCTCTGCCCCAGTG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGCACTGGGGCAGAGGGTaGTTCCTTCAAAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: MKEAGLQASNSGVSHSVWHWGRG*FLQRLL
Trigger: GAGGAGTCTTTGAAGGAAGCACCCTCTGCCCCAGTG...CCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGGCTGGGATAAAAGTTaGAGCAAGGCGGCTGTCACG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQGWDKS*SKAAVT
Trigger: CGTGACAGCCGCCTTGCTGCAACTTTTATCCCAGCC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGGTCTCAAGGCCTGGTaGTCATGTGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILGLKAW*SCGRWP
Trigger: TGGCCACCTGCCACATGAGCACCAGGCCTTGAGACC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGCCTTCAGGAATGGTTaGCCGACCACCGGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISAFRNG*PTTGCN
Trigger: GTTACACCCGGTGGTCGGGCAACCATTCCTGAAGGC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTCCTGTCGCCGGGGTaGCGCGGCCTAGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFLSPG*RGLGAS
Trigger: TGAGGCACCTAGGCCGCGGCACCCCGGCGACAGGAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCGTTGCTCCTACCTGCTaGCTCCTCCTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LQASNSGVSHSVWTGGISVAPTC*LLLWHC
Trigger: ACAATGCCACAGGAGGAGGCAGCAGGTAGGAGCAAC...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCCTGTGGGGGCTCCTaGATCTCCGTTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSCGGS*ISVLGC
Trigger: ACAGCCCAAAACGGAGATCCAGGAGCCCCCACAGGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCGGTGACCGGGTGCTaGACTGGTAGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSVTGC*TGRPKA
Trigger: AGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTTCGACCATAGGGACTaGGCGATCGCCCGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTFDHRD*AIARCK
Trigger: CTTACAGCGGGCGATCGCCCAGTCCCTATGGTCGAA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGGGGAGAAGCAATTGTaGGAAGAGGTGGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQGEKQL*EEVEGS
Trigger: AGACCCCTCCACCTCTTCCCACAATTGCTTCTCCCC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTTGGCAATCCTGCCAGTaGGGGAGGTCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFWQSCQ*GRSGGA
Trigger: GGCTCCTCCAGACCTCCCCCACTGGCAGGATTGCCA...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGGGCACTGATGGATTaGTTCAGGGCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRALMD*FRASSC
Trigger: GCAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGTCTGAGTCCTGCTGCTaGGAAGTAGCTTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: MKEAGLQASNSGVSHSVWSESCC*EVASVR
Trigger: CCTGACGGAAGCTACTTCCCAGCAGCAGGACTCAGA...CCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGATTGGTCTCAAGGCCTaGTGCTCATGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQIGLKA*CSCGRW
Trigger: CCACCTGCCACATGAGCACCAGGCCTTGAGACCAAT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCTGGACTCCCCAAGGTaGCTCAGAGAGCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLDSPR*LREPEK
Trigger: CTTCTCAGGCTCTCTGAGCCACCTTGGGGAGTCCAG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCTCAGCCTTCAGGAATaGTTGCCCGACCACCGGGTG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILLSLQE*LPDHRV
Trigger: CACCCGGTGGTCGGGCAACCATTCCTGAAGGCTGAG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGACGGCCCGGGGCTGTaGAGCCGACTCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQDGPGL*SRLQLW
Trigger: CCAGAGCTGGAGTCGGCTCCACAGCCCCGGGCCGTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGCCCCCATGTCTCTCTaGATTGGGCATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISAPMSL*IGHSLS
Trigger: GGAAAGGGAATGCCCAATTCAGAGAGACATGGGGGC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGTCAGCTGGTGTGCTTaGAGCTTCAAGGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISVSWCA*SFKGRL
Trigger: CAGACGACCCTTGAAGCTTCAAGCACACCAGCTGAC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGTGGCTCAGAGAGCCTaGGAAGGTCCTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISVAQRA*EGPVLH
Trigger: GTGAAGAACAGGACCTTCTCAGGCTCTCTGAGCCAC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCCCTGGAAACTGCACTaGCCCTGTGCCCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILPWKLH*PCALVT
Trigger: AGTTACCAGGGCACAGGGTCAGTGCAGTTTCCAGGG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCTGGTGGAAGAATGTaGGGAGGACATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSGGRM*GGHAAA
Trigger: GGCAGCAGCATGTCCTCCTCACATTCTTCCACCAGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAACTGTGCCCAGGGATaGTGCTTCGGGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILNCAQG*CFGGHQ
Trigger: TTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGACCTGGATTCCTTGCTaGTGCTTTTGGCTACCTGCG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQTWIPC*CFWLPA
Trigger: CGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTGCTCAGGAAAGGGCTaGTGGACCGCCTTCGACCAT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITCSGKG*WTAFDH
Trigger: ATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCAACTCATGGCAATCCTaGCAGTGGGGGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTNSWQS*QWGRSG
Trigger: TCCAGACCTCCCCCACTGGCAGGATTGCCATGAGTT...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGCATGTCAGCTGGTGTaGTTGAAGCTTCAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQACQLV*LKLQGS
Trigger: CGACCCTTGAAGCTTCAAGCACACCAGCTGACATGC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGTGTTTTCCTCCAGACTaGCTGCTGGCTCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RKQACRPLILVSHTVFGQCFPPD*LLALGF
Trigger: AAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACA...CTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGGTCTCAAGGCCTGGTaGTCATGTGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLGLKAW*SCGRWP
Trigger: TGGCCACCTGCCACATGAGCACCAGGCCTTGAGACC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGGCCTGCTCCTGAGCTaGTGGCCCCAGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDGLLLS*WPQWFL
Trigger: CAGGAACCACTGGGGCCAGCAGCTCAGGAGCAGGCC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGTGCCGCGGCCTAGGTaGCTCACGCCCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQVPRPR*LTPPLS
Trigger: GGACAAAGGGGGCGTGAGGCACCTAGGCCGCGGCAC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGTTGAGCTGCTGCATGTaGTGTCTGGATTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RKQACRPLILVSHTVFGQLSCCM*CLDCRD
Trigger: ATCCCTGCAATCCAGACAGCACATGCAGCAGCTCAA...CTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCCCTTCTACATGAGGTaGGGGGTGAAGGAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLPFYMR*GVKERG
Trigger: CCCTCGCTCCTTCACCCCCCACCTCATGTAGAAGGG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATCAGACCACTTCCTGTaGGGGCTCCTGGATCTCCGT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGSDHFL*GLLDLR
Trigger: ACGGAGATCCAGGAGCCCCCACAGGAAGTGGTCTGA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCAGACCACTTCCTGTaGGGGCTCCTGGATCTCCGT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSDHFL*GLLDLR
Trigger: ACGGAGATCCAGGAGCCCCCACAGGAAGTGGTCTGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACTCGGTGACCGGGTGCTaGACTGGTAGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDSVTGC*TGRPKA
Trigger: AGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGA...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATCAGGAAAGGGCTGCTaGACCGCCTTCGACCATAGG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGSGKGC*TAFDHR
Trigger: CCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACCAGTGGGGGAGGTCTaGAGGAGCCATTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGPVGEV*RSHFAE
Trigger: CTCAGCAAAATGGCTCCTCCAGACCTCCCCCACTGG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGCTGCTGCTGCATCTCTaGGTTGGAGTGGATGTTAAG +
Preference number: 4 (lower is better)
Translates to: KQACRPLILVSHTVFGQVLLLHL*VGVDVK
Trigger: CTTAACATCCACTCCAACCCAGAGATGCAGCAGCAG...CACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCTTCGGGGCCCCTGTaGCCCACTGTTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSSGPL*PTVLVT
Trigger: AGTGACAAGAACAGTGGGCCACAGGGGCCCCGAAGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTGCTGCCTCCTCCTGTaGCATTGTGGGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTCCLLL*HCGSSS
Trigger: CGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGGGATTTCCCACTGAACCTGGCTTGGCTTTAGGTTCTGTGAAAGAGACTGAATGCTGCCTCCTCCTGTaGCATTGTGGGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VGFPTEPGLALGSVKETECCLLL*HCGSSS
Trigger: CGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCA...TTCAGTCTCTTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATGCTCATGTGGCAGGTaGCCAGGAGGCTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGCSCGR*PGGSAS
Trigger: TGAAGCAGAGCCTCCTGGCCACCTGCCACATGAGCA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGGCCTGGTGCTCATGTaGCAGGTGGCCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKGLVLM*QVARRL
Trigger: GAGCCTCCTGGCCACCTGCCACATGAGCACCAGGCC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCATTGGTCTCAAGGCCTaGTGCTCATGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTIGLKA*CSCGRW
Trigger: CCACCTGCCACATGAGCACCAGGCCTTGAGACCAAT...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTTGGACGGGGTCGGGTaGAGTACTCCATTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTLDGVG*STPLVS
Trigger: TGAGACCAATGGAGTACTCCACCCGACCCCGTCCAA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGCAAAACGGAGGTCCTaGTCCCCTGGAAACTGCACT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISAKRRS*SPGNCT
Trigger: AGTGCAGTTTCCAGGGGACCAGGACCTCCGTTTTGC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAACGCTAAGGGGACCCTaGCAAAACGGAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGTLRGP*QNGGPG
Trigger: ACCAGGACCTCCGTTTTGCCAGGGTCCCCTTAGCGT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCTTCCCCCTCTTGGTaGGACTCTTGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSSPSW*DSCRPP
Trigger: CGGGGGCCTACAAGAGTCCCACCAAGAGGGGGAAGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCCCTCTTCCCCCTCTTaGTGGGACTCTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLPSSPS*WDSCRP
Trigger: GGGCCTACAAGAGTCCCACCAAGAGGGGGAAGAGGG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACTGTGACCTGTCCCATCTaGGCATTGGGGATGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RPLILVSHTVFGQVGFPTVTCPI*ALGMKE
Trigger: TTCCTTCATCCCCAATGCCCAGATGGGACAGGTCAC...AGTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGCCCCCATGTCTCTCTaGATTGGGCATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITAPMSL*IGHSLS
Trigger: GGAAAGGGAATGCCCAATTCAGAGAGACATGGGGGC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCGCCTGTGCTGGTGGTaGCGATGTTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKRLCWW*RCLCRR
Trigger: CCGCCTGCACAAACATCGTCACCACCAGCACAGGCG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCTCATTCGAACGCTTTaGACTTCCCGATATCCGGTC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQLIRTL*TSRYPV
Trigger: GACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCCTGCTATAGGGACTaGCAGATCTCTGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSCYRD*QISVAY
Trigger: GTAGGCGACAGAGATCTGTCAGTCCCTATAGCAGGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCCTGCTATAGGGACTaGCAGATCTCTGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSCYRD*QISVAY
Trigger: GTAGGCGACAGAGATCTGTCAGTCCCTATAGCAGGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGGTCTGTGAGTAAGTaGCGTGTCCTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRSVSK*RVLCSF
Trigger: GAAGGAACAGAGGACACGTCACTTACTCACAGACCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGACACCACTTTGTCGCTaGCGTCGCCGTTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISTPLCR*RRRFLL
Trigger: GAGTAAGAAACGGCGACGTCAGCGACAAAGTGGTGT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAGCAGCTGTGCCATTTaGGGGATGCTCAGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSSCAI*GMLRSV
Trigger: AACCGACCTGAGCATCCCTCAAATGGCACAGCTGCT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGTGGCTCAGAGAGCCTaGGAAGGTCCTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGVAQRA*EGPVLH
Trigger: GTGAAGAACAGGACCTTCTCAGGCTCTCTGAGCCAC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTGGATTCCTTGCTGCTaGTTTTGGCTACCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISWIPCC*FWLPAP
Trigger: AGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCGGGGGACTGACCGACTaGCTTCTCGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAGGLTD*LLEVLP
Trigger: TGGAAGTACCTCGAGAAGGCAGTCGGTCAGTCCCCC...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLDSETA*SGKGCW
Trigger: CCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACGATGTTAAGCAGCTGTaGCATTTGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QASNSGVSHSVWTGGISHDVKQL*HLRDAQ
Trigger: CTGAGCATCCCTCAAATGGCACAGCTGCTTAACATC...GTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTATGGTCTCTGAGTCCTaGTGCTGGGAAGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSMVSES*CWEVAS
Trigger: GGAAGCTACTTCCCAGCAGCAGGACTCAGAGACCAT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCACTGGGGCAGAGGGTaGTTCCTTCAAAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITHWGRG*FLQRLL
Trigger: GAGGAGTCTTTGAAGGAAGCACCCTCTGCCCCAGTG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCTTCCTCCAGACTGCCTaGTGGCTCTTGGGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LQASNSGVSHSVWTGGISFLQTA*WLLGFH
Trigger: ATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAGGAA...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGGGCCTCTTCTCTGCTaGCTCCTCCTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLGPLLC*LLLWHC
Trigger: ACAATGCCACAGGAGGAGGCAGCAGAGAAGAGGCCC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430627.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGGCTGGGATAAAAGTTaGAGCAAGGCGGCTGTCACG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITGWDKS*SKAAVT
Trigger: CGTGACAGCCGCCTTGCTGCAACTTTTATCCCAGCC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGTACCACAGAATTGCTaGTTCCCTCAGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQVPQNC*FPQPSG
Trigger: TCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTAC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGGTAGCCCCCTTTCTTaGCTCCGTTTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITGSPLS*LRFTST
Trigger: TGTGGAGGTGAAACGGAGGCAAGAAAGGGGGCTACC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGACTGATGGACATCACTaGATTCCTCAGAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RKQACRPLILVSHTVFGQTDGHH*IPQRAF
Trigger: GAATGCCCTCTGAGGAATGCAGTGATGTCCATCAGT...CTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCCTTGCTGCTGCTTTTaGCTACCTGCGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILPCCCF*LPAPSH
Trigger: ATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGGAGCTTGGATGACCTaGATTCCTTGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQGAWMT*IPCCCF
Trigger: AAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCTCAGGAAAGGGCTGCTaGACCGCCTTCGACCATAGG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTASGKGC*TAFDHR
Trigger: CCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGA...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGGGGAGAAGCAATTGTaGGAAGAGGTGGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGGEKQL*EEVEGS
Trigger: AGACCCCTCCACCTCTTCCCACAATTGCTTCTCCCC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTGGTTCTGGAGAGTCTaGGGGAGACAGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITWFWRV*GRQIST
Trigger: GGTGGAGATCTGTCTCCCCCAGACTCTCCAGAACCA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGATTGCCTTTGGTTCTaGAGAGTCTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSDCLWF*RVWGRQ
Trigger: CTGTCTCCCCCAGACTCTCCAGAACCAAAGGCAATC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGATTGCCTTTGGTTCTaGAGAGTCTGGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISDCLWF*RVWGRQ
Trigger: CTGTCTCCCCCAGACTCTCCAGAACCAAAGGCAATC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTATCAGGCCACACAGCTaGACAAGGGCTACCACAAAG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSIRPHS*TRATTK
Trigger: CTTTGTGGTAGCCCTTGTCCAGCTGTGTGGCCTGAT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTGGCAATCCTGCCAGTaGGGGAGGTCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKWQSCQ*GRSGGA
Trigger: GGCTCCTCCAGACCTCCCCCACTGGCAGGATTGCCA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCTGCTGCTGCATCTCTaGGTTGGAGTGGATGTTAAG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQLLLHL*VGVDVK
Trigger: CTTAACATCCACTCCAACCCAGAGATGCAGCAGCAG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCTCTTCGGGGCCCCTGTaGCCCACTGTTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTASSGPL*PTVLVT
Trigger: AGTGACAAGAACAGTGGGCCACAGGGGCCCCGAAGA...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGCTGCCTCCTCCTGTaGCATTGTGGGAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILCCLLL*HCGSSS
Trigger: CGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTGCTCATGTGGCAGGTaGCCAGGAGGCTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLCSCGR*PGGSAS
Trigger: TGAAGCAGAGCCTCCTGGCCACCTGCCACATGAGCA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTTGGACGGGGTCGGGTaGAGTACTCCATTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITLDGVG*STPLVS
Trigger: TGAGACCAATGGAGTACTCCACCCGACCCCGTCCAA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCCATAAGTCCTGTTTaGACGGGGTCGGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSISPV*TGSGGV
Trigger: TACTCCACCCGACCCCGTCCAAACAGGACTTATGGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCTGGACTCCCCAAGGTaGCTCAGAGAGCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLLDSPR*LREPEK
Trigger: CTTCTCAGGCTCTCTGAGCCACCTTGGGGAGTCCAG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCTTGTGGAGCTTGGATaGCCTGGATTCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITLVELG*PGFLAA
Trigger: AGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCGAGGTATGAGATCGTaGGGGACTAAGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRGMRS*GTKVII
Trigger: GATTATGACCTTAGTCCCTCACGATCTCATACCTCG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCCTTGTAAGGGGGACTaGCCGACTGCCTTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKPCKGD*PTAFSR
Trigger: CCTCGAGAAGGCAGTCGGTCAGTCCCCCTTACAAGG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAACTGTAGGGGCTCGGTaGCCGGGTGCTGGACTGGTA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELTVGAR*PGAGLV
Trigger: TACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACGGCAAAGGGGGTGTCTaGGGTGGAGGGGTAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDGKGGV*GGGVVV
Trigger: AACTACTACCCCTCCACCTCAGACACCCCCTTTGCC...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCACAGCAGATGTCTTTaGGTGAGTAGAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTHSRCL*VSRRGQ
Trigger: TTGCCCCCTTCTACTCACTCAAAGACATCTGCTGTG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGTTGCTGAGGTGGTGTaGTTGCCTTTGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGVAEVV*LPLVLE
Trigger: CTCCAGAACCAAAGGCAATCACACCACCTCAGCAAC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCTGATCAGTTCTAGCTaGGCCAGTTCCAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLISSS*ASSRLA
Trigger: AGCCAATCTGGAACTGGCTCAGCTAGAACTGATCAG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAACACCACTTTGTCGCTaGCGTCGCCGTTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGTPLCR*RRRFLL
Trigger: GAGTAAGAAACGGCGACGTCAGCGACAAAGTGGTGT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTAGCAGCTGTGCCATTTaGGGGATGCTCAGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSSCAI*GMLRSV
Trigger: AACCGACCTGAGCATCCCTCAAATGGCACAGCTGCT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCGGTCGTCTGTTCTGCTaGAGGCAGGATCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISGRLFC*RQDHWG
Trigger: GCCCCAGTGATCCTGCCTTCAGCAGAACAGACGACC...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACAGTGTCAATGGCACTaGACCCTGTTTCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGQCQWH*TLFQAH
Trigger: ATGGGCCTGAAACAGGGTTCAGTGCCATTGACACTG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCACTCCCGTCCTTCTTaGCCCCATGTCTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILHSRPS*PHVSLN
Trigger: ATTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCCTCCCGATGACGGCTaGAAAGTTCCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLPPDDG*KVPEAP
Trigger: AGGAGCTTCTGGAACTTTGCAGCCGTCATCGGGAGG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGGATTCCTTGCTGCTaGTTTTGGCTACCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILWIPCC*FWLPAP
Trigger: AGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATTACTCCGGTCTTTGTaGCCAGACTTCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGLLRSL*PDFSSR
Trigger: ACGGGAGCTGAAGTCTGGGCACAAAGACCGGAGTAA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGTGCCATTTGAGGGATaGTCAGGTCGGTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILVPFEG*SGRFGS
Trigger: AGAGCCAAACCGACCTGAGCATCCCTCAAATGGCAC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCTTCAGGGCTTCCAGCTaGTGCTGCATCTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAFRASS*CCISGL
Trigger: CAACCCAGAGATGCAGCAGCAGCTGGAAGCCCTGAA...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCTGTGCCCTGGTAACTaGTGGACTCCCCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKLCPGN*WTPQGG
Trigger: GCCACCTTGGGGAGTCCAGCAGTTACCAGGGCACAG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTGGTCCCCTGGAAACTaGACTGACCCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDWSPGN*TDPVPW
Trigger: CCAGGGCACAGGGTCAGTGCAGTTTCCAGGGGACCA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGTACCACAGAATTGCTaGTTCCCTCAGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSVPQNC*FPQPSG
Trigger: TCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTAC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCAATGTGAGGAGGACATaGTGCTGCCTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTANVRRT*CCLLLW
Trigger: CCACAGGAGGAGGCAGCAGCATGTCCTCCTCACATT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCGGGCATTCCCACCGTTaGTCCTACCTGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISGHSHR*SYLLPP
Trigger: AGGAGGCAGCAGGTAGGAGCAACGGTGGGAATGCCC...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCATGGATTTCCTACTaGGGAGTGGACTCCGACTCA +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSWISY*GVDSDS
Trigger: TGAGTCGGAGTCCACTCCCCAGTAGGAAATCCATGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTATTGGAGGCAAAGGTaGCAAAGGGGGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILYWRQR*QRGCLR
Trigger: CCTCAGACACCCCCTTTGCCACCTTTGCCTCCAATA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTTACTCCACAACTCATaGCAATCCTGCCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITLLHNS*QSCQWG
Trigger: CCCCCACTGGCAGGATTGCCATGAGTTGTGGAGTAA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCTGAGTCCTGCTGCTaGGAAGTAGCTTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSESCC*EVASVR
Trigger: CCTGACGGAAGCTACTTCCCAGCAGCAGGACTCAGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCTCCAGACTGCCTGCTaGCTCTTGGGTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILLQTAC*LLGFHQ
Trigger: CTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDPPVAL*EFFGAP
Trigger: AGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGCTGGGTTCAACTCCTaGGGGGCGCTGGAAAGATCG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDAGFNS*GALERS
Trigger: CGATCTTTCCAGCGCCCCCCAGGAGTTGAACCCAGC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTCCATAAGTCCTGTTTaGACGGGGTCGGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSISPV*TGSGGV
Trigger: TACTCCACCCGACCCCGTCCAAACAGGACTTATGGA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGGATTCTGTCAAGGCTaGACCAGAGTTTCGTTCATC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQGFCQG*TRVSFI
Trigger: GATGAACGAAACTCTGGTCCAGCCTTGACAGAATCC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTTCTTCACCAGGGTCTaGACCAAGGATTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQFFTRV*TKDSVK
Trigger: CTTGACAGAATCCTTGGTCCAGACCCTGGTGAAGAA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTTTCGATACCAAGCGGTaGCGCTCTCTGCTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFFDTKR*RSLLLE
Trigger: CTCTAACAGCAGAGAGCGTCACCGCTTGGTATCGAA...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGGTGAGATACTGGAATaGCGACTGCGTGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITGEILE*RLRELD
Trigger: ATCCAGTTCACGCAGTCGTCATTCCAGTATCTCACC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGTCGTCTGTTCTGCTaGAGGCAGGATCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGRLFC*RQDHWG
Trigger: GCCCCAGTGATCCTGCCTTCAGCAGAACAGACGACC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGACAAAGGCCCATGTCTaGGGACTAAGAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISTKAHV*GLRSQQ
Trigger: CTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTTTTCTGGGCATTGGGGATaGAGGAAGCAGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KAIPGQDSNDFPSLGLVFSGHWG*RKQACR
Trigger: CCTGCAAGCCTGCTTCCTTCATCCCCAATGCCCAGA...AAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTACCTGGATTCCTTGCTaGTGCTTTTGGCTACCTGCG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLTWIPC*CFWLPA
Trigger: CGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTGCAGCAGCAGCAGCTaGTCTTTCCTTCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSCSSSS*SFLLFP
Trigger: AGGAAAAAGAAGGAAAGAGCAGCTGCTGCTGCTGCA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTCAGCAAGGCCTATTaGATCCCCAGCCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVSKAY*IPSPRL
Trigger: GAGTCTGGGGCTGGGGATGCAATAGGCCTTGCTGAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTGTTTTCCTCCAGACTaGCTGCTGGCTCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITCFPPD*LLALGF
Trigger: AAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACTGTGCCCTGGTAACTaGTGGACTCCCCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRLCPGN*WTPQGG
Trigger: GCCACCTTGGGGAGTCCAGCAGTTACCAGGGCACAG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATGGTCCCCTGGAAACTaGACTGACCCTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQWSPGN*TDPVPW
Trigger: CCAGGGCACAGGGTCAGTGCAGTTTCCAGGGGACCA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGCCTTCAGGAATGGTTaGCCGACCACCGGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKAFRNG*PTTGCN
Trigger: GTTACACCCGGTGGTCGGGCAACCATTCCTGAAGGC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTCATGTACCACAGAATTaGTGCTTCCCTCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSHVPQN*CFPQPS
Trigger: TGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATG...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTACAACCTGCTTTATGTaGAGGGAGAAGGGCGTATCT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSTTCFM*REKGVS
Trigger: AGATACGCCCTTCTCCCTGCACATAAAGCAGGTTGT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCGGTCAAACCAGTTTTaGCTCCCACTCATGAACAGA +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISRSNQF*LPLMNR
Trigger: TCTGTTCATGAGTGGGAGGCAAAACTGGTTTGACCG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTGCTGTCTGTCACATTTGAGCTGCTaGATGTGCTGTCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: FPLSGSCFSHLSCCMCCLSHLSC*MCCLDC
Trigger: GCAATCCAGACAGCACATGCAGCAGCTCAAATGTGA...CAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGAGAGTTCCTCGGCAGTaGAGTTGCGAGACAACGGGG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKRVPRQ*SCETTG
Trigger: CCCCGTTGTCTCGCAACTCCACTGCCGAGGAACTCT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATAGAGTTCCTCGGCAGTaGAGTTGCGAGACAACGGGG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDRVPRQ*SCETTG
Trigger: CCCCGTTGTCTCGCAACTCCACTGCCGAGGAACTCT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTGTCTTTGGAGTGTTTaGACTTATGCCGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQCLWSV*TYAACA
Trigger: AGCACAAGCGGCATAAGTCCAAACACTCCAAAGACA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGGAGCTTGGATGACCTaGATTCCTTGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGGAWMT*IPCCCF
Trigger: AAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCTGGTCTTCTCCTTGTaGAGCTTGGATGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILLVFSL*SLDDLD
Trigger: ATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGCTCCCGTTCTTTCCTaGTCTTCTCCTTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLAPVLS*SSPCGA
Trigger: AGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCCTGGATCTCCGTTTTaGGCTGTCCACTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTPGSPF*AVHCFV
Trigger: TACAAAACAGTGGACAGCCCAAAACGGAGATCCAGG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCATGGATTTCCTACTaGGGAGTGGACTCCGACTCA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSWISY*GVDSDS
Trigger: TGAGTCGGAGTCCACTCCCCAGTAGGAAATCCATGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATTGCTGTGGAAGAGCTaGTATTGGAGGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGLLWKS*YWRQRW
Trigger: CCACCTTTGCCTCCAATACCAGCTCTTCCACAGCAA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTTGGTGTGATTGCCTTTaGTTCTGGAGAGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFWCDCL*FWRVWG
Trigger: CCCCCAGACTCTCCAGAACCAAAGGCAATCACACCA...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATAGGCTGAGGTGGTGCTaGGCTGCTGTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDRLRWC*AAVLHR
Trigger: CCTGTGAAGAACAGCAGCCCAGCACCACCTCAGCCT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGAGGAGCAGGCTGAGGTaGTGCTGGGCTGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKRSRLR*CWAAVL
Trigger: AAGAACAGCAGCCCAGCACCACCTCAGCCTGCTCCT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGGGATTTCCCACTGAACCTGGCTTGGCTTTAGGTTCTGTGAAAGAGACTGAAATGCTCAGGTCGGTTTaGCTCTGCAGCAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: VGFPTEPGLALGSVKETEMLRSV*LCSRFN
Trigger: ATTAAACCTGCTGCAGAGCCAAACCGACCTGAGCAT...TTCAGTCTCTTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp AAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTTTTCTTCGGGGCCCCTGTaGCCCACTGTTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KAIPGQDSNDFPSLGLVFSSGPL*PTVLVT
Trigger: AGTGACAAGAACAGTGGGCCACAGGGGCCCCGAAGA...AAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGGATTCTGTCAAGGCTaGACCAGAGTTTCGTTCATC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISGFCQG*TRVSFI
Trigger: GATGAACGAAACTCTGGTCCAGCCTTGACAGAATCC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTGCCCTGGTAACTGCTaGACTCCCCAAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDCPGNC*TPQGGS
Trigger: TGAGCCACCTTGGGGAGTCCAGCAGTTACCAGGGCA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGAGCGAGGGAAGAAATaGGAGTTCCTCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDERGKK*EFLGSG
Trigger: TCCACTGCCGAGGAACTCTCATTTCTTCCCTCGCTC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTGTCGGAATCAGAGCTaGTATCATCATACTCCACCA +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISCRNQS*YHHTPP
Trigger: TGGTGGAGTATGATGATATCAGCTCTGATTCCGACA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTTGGAAGCCTGACAGGTaGGATACTGGAATGACGACT +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFWKPDR*DTGMTT
Trigger: AGTCGTCATTCCAGTATCTCACCTGTCAGGCTTCCA...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGCAAAGGGGGTGTCTaGGGTGGAGGGGTAGTAGTT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGKGGV*GGGVVV
Trigger: AACTACTACCCCTCCACCTCAGACACCCCCTTTGCC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGCAGATGTCTTTGAGTaGGTAGAAGGGGGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILADVFE*VEGGKV
Trigger: AACTTTGCCCCCTTCTACTCACTCAAAGACATCTGC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCACAGCAGATGTCTTTaGGTGAGTAGAAGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLHSRCL*VSRRGQ
Trigger: TTGCCCCCTTCTACTCACTCAAAGACATCTGCTGTG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGATTCAGCTGTTGTGTaGTGTCAGCAAGGCCTATTG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILDSAVV*CQQGLL
Trigger: CAATAGGCCTTGCTGACATCACACAACAGCTGAATC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGATTCAGCTGTTGTGTaGTGTCAGCAAGGCCTATTG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITDSAVV*CQQGLL
Trigger: CAATAGGCCTTGCTGACATCACACAACAGCTGAATC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTCAGCTGGTGTGCTTaGAGCTTCAAGGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVSWCA*SFKGRL
Trigger: CAGACGACCCTTGAAGCTTCAAGCACACCAGCTGAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTGCTGTCTGTGGGTTTTCATCAGCTaGCTCAAGAGAACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FPLSGSCFSHLSCCMCCLWVFIS*LKRTAN
Trigger: ATTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCA...CAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACCCTGGAAACTGCACTaGCCCTGTGCCCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELPWKLH*PCALVT
Trigger: AGTTACCAGGGCACAGGGTCAGTGCAGTTTCCAGGG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCAAAGAGCCTCTCCTaGGCCATCTCAATACTGAAA +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSKSLS*AISILK
Trigger: TTTCAGTATTGAGATGGCTCAGGAGAGGCTCTTTGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATTTGTCCCTCGCTCCTaGGGTAGCCCCCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQFVPRS*GSPLSC
Trigger: GCAAGAAAGGGGGCTACCTCAGGAGCGAGGGACAAA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTTGAACAGATACTTCTaGAAGTATCCCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLNRYF*KYPRLT
Trigger: CGTGAGCCTGGGATACTTTCAGAAGTATCTGTTCAA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCATGACCTGGATTCCTTaGTGCTGCTTTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITMTWIP*CCFWLP
Trigger: AGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCAT...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACTTACTCCGGTCTTTGTaGCCAGACTTCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDLLRSL*PDFSSR
Trigger: ACGGGAGCTGAAGTCTGGGCACAAAGACCGGAGTAA...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGGGGACTGACCGACTaGCTTCTCGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGGLTD*LLEVLP
Trigger: TGGAAGTACCTCGAGAAGGCAGTCGGTCAGTCCCCC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGATGCTCAGGAAAGGGCTaGTGGACCGCCTTCGACCAT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRCSGKG*WTAFDH
Trigger: ATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCA...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACGGAGGCAGAGGTGGTTaGTGTGGAAGAGCTGGTATT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDGGRGG*CGRAGI
Trigger: AATACCAGCTCTTCCACAGCAACCACCTCTGCCTCC...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCAGGAACCTGACTAAATaGTGGCTGAGAAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTARNLTK*WLRRRQ
Trigger: CTGCCTCCTTCTCAGCCAGCATTTAGTCAGGTTCCT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGAGGTGGTGCTGGGCTaGTGTTCTTCACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQEVVLG*CSSQAQ
Trigger: CTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAGCAGGCTGAGGTGGTaGTGGGCTGCTGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELSRLRW*WAAVLH
Trigger: GTGAAGAACAGCAGCCCAGCACCACCTCAGCCTGCT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGTCAGCAAGGCCTATTaGATCCCCAGCCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQVSKAY*IPSPRL
Trigger: GAGTCTGGGGCTGGGGATGCAATAGGCCTTGCTGAC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTGTGCCATTTGAGGGATaGTCAGGTCGGTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QIQEHKAIPGQDSNDFPSVPFEG*SGRFGS
Trigger: AGAGCCAAACCGACCTGAGCATCCCTCAAATGGCAC...AGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGATGTTAAGCAGCTGTaGCATTTGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILDVKQL*HLRDAQ
Trigger: CTGAGCATCCCTCAAATGGCACAGCTGCTTAACATC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTCTCTGAGTCCTGCTaGTGGGAAGTAGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVSESC*WEVASV
Trigger: GACGGAAGCTACTTCCCAGCAGCAGGACTCAGAGAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTGTTTTCCTCCAGACTaGCTGCTGGCTCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLCFPPD*LLALGF
Trigger: AAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACCTGGCAGGGTACACATaGTGGGATGTGGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDLAGYT*WDVGMS
Trigger: TGACATACCCACATCCCAGCATGTGTACCCTGCCAG...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGTTTTCACATTTGAGCTaGTGCATGTGCTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MKEAGLQASNSGVSHSVWFSHLS*CMCCLD
Trigger: ATCCAGACAGCACATGCAGCAGCTCAAATGTGAAAA...CCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGGCTATCATCTTGTTTaGAGCTGTCAGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILGYHLV*SCQTTS
Trigger: GGAAGTGGTCTGACAGCTCCAAACAAGATGATAGCC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTCACTTCTTTCGTAGCTaGACGACCGTCTCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFHFFRS*TTVSCY
Trigger: ATAGCAGGAGACGGTCGTCCAGCTACGAAAGAAGTG...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTTTCCTACTGGGGAGTaGACTCCGACTCAGAGACCG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKFPTGE*TPTQRP
Trigger: CGGTCTCTGAGTCGGAGTCCACTCCCCAGTAGGAAA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTACTTCTGGACTTCATaGATTTCCTACTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTYFWTS*ISYWGV
Trigger: CACTCCCCAGTAGGAAATCCATGAAGTCCAGAAGTA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGATACAGGTGAACCCTTaGACTCCTTTCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISIQVNP*TPFHPS
Trigger: AGATGGATGGAAAGGAGTCCAAGGGTTCACCTGTAT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTATACAGGTGAACCCTTaGACTCCTTTCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSIQVNP*TPFHPS
Trigger: AGATGGATGGAAAGGAGTCCAAGGGTTCACCTGTAT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTTGCTGTGGAAGAGCTaGTATTGGAGGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLLLWKS*YWRQRW
Trigger: CCACCTTTGCCTCCAATACCAGCTCTTCCACAGCAA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCAACCTGACTAAATGCTaGCTGAGAAGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTANLTKC*LRRRQR
Trigger: CCTCTGCCTCCTTCTCAGCCAGCATTTAGTCAGGTT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACCAGTGGGGGAGGTCTaGAGGAGCCATTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRPVGEV*RSHFAE
Trigger: CTCAGCAAAATGGCTCCTCCAGACCTCCCCCACTGG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACTTACTCCACAACTCATaGCAATCCTGCCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDLLHNS*QSCQWG
Trigger: CCCCCACTGGCAGGATTGCCATGAGTTGTGGAGTAA...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATCGAGAAGTTTTGGATaGAGGTGGCTCTTCGACTAC +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGSRSFG*RWLFDY
Trigger: GTAGTCGAAGAGCCACCTCCATCCAAAACTTCTCGA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGGCTGAGGTGGTGCTaGGCTGCTGTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQRLRWC*AAVLHR
Trigger: CCTGTGAAGAACAGCAGCCCAGCACCACCTCAGCCT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGAGGGCACTGATGGATTaGTTCAGGGCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKRALMD*FRASSC
Trigger: GCAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TTCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCAGGGCACTGATGGATTaGTTCAGGGCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSKSRNTKQYQDRIQMISRALMD*FRASSC
Trigger: GCAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCT...GGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp CAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTCCAGACTGCCTGCTaGCTCTTGGGTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: QIQEHKAIPGQDSNDFPSLQTAC*LLGFHQ
Trigger: CTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAG...AGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGGCTCTGCTTCAGGCTaGGATAAAAGTTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLGSASG*DKSCSK
Trigger: CTTGCTGCAACTTTTATCCCAGCCTGAAGCAGAGCC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGGTGGAGTACTCCATTaGTCTCAAGGCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKGGVLH*SQGLVL
Trigger: GAGCACCAGGCCTTGAGACCAATGGAGTACTCCACC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGGTGGAGTACTCCATTaGTCTCAAGGCCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDGGVLH*SQGLVL
Trigger: GAGCACCAGGCCTTGAGACCAATGGAGTACTCCACC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGCAAAACGGAGGTCCTaGTCCCCTGGAAACTGCACT +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKAKRRS*SPGNCT
Trigger: AGTGCAGTTTCCAGGGGACCAGGACCTCCGTTTTGC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAACGCTAAGGGGACCCTaGCAAAACGGAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELTLRGP*QNGGPG
Trigger: ACCAGGACCTCCGTTTTGCCAGGGTCCCCTTAGCGT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGACACACACATACAAGTaGTTGGGTGATGTCTATGGC +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISTHTYK*LGDVYG
Trigger: GCCATAGACATCACCCAACCACTTGTATGTGTGTGT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGAGCGAGGGAAGAAATaGGAGTTCCTCGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQERGKK*EFLGSG
Trigger: TCCACTGCCGAGGAACTCTCATTTCTTCCCTCGCTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTCGATACCAAGCGGTaGCGCTCTCTGCTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFDTKR*RSLLLE
Trigger: CTCTAACAGCAGAGAGCGTCACCGCTTGGTATCGAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGGAATGACGACTGCGTaGACTGGATCTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGGMTTA*TGSLLF
Trigger: AAAAAGAAGAGATCCAGTTCACGCAGTCGTCATTCC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACGGTGAGATACTGGAATaGCGACTGCGTGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDGEILE*RLRELD
Trigger: ATCCAGTTCACGCAGTCGTCATTCCAGTATCTCACC...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTAGGCAAAAATACAGGTaGACCCTTGGACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLRQKYR*TLGLLS
Trigger: GGAAAGGAGTCCAAGGGTTCACCTGTATTTTTGCCT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTATCCTTAGCCTCTACTaGACTGTTCTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSILSLY*TVLFSR
Trigger: CCTAGAAAAGAGAACAGTTCAGTAGAGGCTAAGGAT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGATCCTTAGCCTCTACTaGACTGTTCTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISILSLY*TVLFSR
Trigger: CCTAGAAAAGAGAACAGTTCAGTAGAGGCTAAGGAT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGGAGAGGAAGGTCTGTaGGTAAGTGACGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDGEEGL*VSDVSS
Trigger: AGAGGACACGTCACTTACTCACAGACCTTCCTCTCC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGTTGCTGAGGTGGTGTaGTTGCCTTTGGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKVAEVV*LPLVLE
Trigger: CTCCAGAACCAAAGGCAATCACACCACCTCAGCAAC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTTTCACGAATGGCTGTaGTTGGGAAGCCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLFHEWL*LGSPLS
Trigger: AGAAAGAGGGCTTCCCAATCACAGCCATTCGTGAAA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACCTGATCAGTTCTAGCTaGGCCAGTTCCAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDLISSS*ASSRLA
Trigger: AGCCAATCTGGAACTGGCTCAGCTAGAACTGATCAG...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACTCAGTACTTGTCCCTaGGGTAGTTTCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGLSTCP*GSFFSR
Trigger: TCTCGAAAAGAAACTACCTCAGGGACAAGTACTGAG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACTTCCGTCAGGGCACTaGTGGATTGGTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQLPSGH*WIGSGL
Trigger: AAGCCCTGAACCAATCCATCAGTGCCCTGACGGAAG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCAAAGAGCCTCTCCTaGGCCATCTCAATACTGAAA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSKSLS*AISILK
Trigger: TTTCAGTATTGAGATGGCTCAGGAGAGGCTCTTTGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCACTCCCGTCCTTCTTaGCCCCATGTCTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKHSRPS*PHVSLN
Trigger: ATTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCATCGATCCCGACTTaGTGGAGACTTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSSIPT*WRLLGF
Trigger: AAAGCCAAGAAGTCTCCAGCAAGTCGGGATCGATGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCATGACCTGGATTCCTTaGTGCTGCTTTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAMTWIP*CCFWLP
Trigger: AGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCAT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTGTAGGAGTCATAATTaGTCGAGGTATGAGATCGTG +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTCRSHN*SRYEIV
Trigger: CACGATCTCATACCTCGAGCAATTATGACTCCTACA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATACTGGAATGACGACTaGGTGAACTGGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGYWNDD*VNWISS
Trigger: AGAAGAGATCCAGTTCACGCAGTCGTCATTCCAGTA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAATCTCCTCTTTCAGTaGTATGGGTTTAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQNLLFQ*YGFRVS
Trigger: AGAGACTCTAAACCCATAGCACTGAAAGAGGAGATT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAGACGCCTTCGATATTaGTTCTTCGGTTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILRRLRY*FFGFMV
Trigger: CACCATGAAACCGAAGAAGCAATATCGAAGGCGTCT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAACTCATGGCAATCCTaGCAGTGGGGGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELNSWQS*QWGRSG
Trigger: TCCAGACCTCCCCCACTGGCAGGATTGCCATGAGTT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAGGTCGGTTTGGCTCTaGAGCAGGTTTAATAACACT +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILRSVWL*SRFNNT
Trigger: AGTGTTATTAAACCTGCTGCAGAGCCAAACCGACCT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGTCTCTGAGTCCTGCTaGTGGGAAGTAGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELVSESC*WEVASV
Trigger: GACGGAAGCTACTTCCCAGCAGCAGGACTCAGAGAC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTACTGCCAATATATTCTaGATGTCAGCTGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSTANIF*MSAGVL
Trigger: AAGCACACCAGCTGACATGCAGAATATATTGGCAGT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTGCTGTCTGACTGCCAATATATTCTaGATGTCAGCTGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: FPLSGSCFSHLSCCMCCLTANIF*MSAGVL
Trigger: AAGCACACCAGCTGACATGCAGAATATATTGGCAGT...CAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTACAACGGACAGCTTTaGAGTAGCCAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITYNGQL*SSQMQM
Trigger: CATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCACAACCTGCTTTATGTaGAGGGAGAAGGGCGTATCT +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTATTCFM*REKGVS
Trigger: AGATACGCCCTTCTCCCTGCACATAAAGCAGGTTGT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCCTACTTGCCCAAGAATaGCACGTTCTACAACCTGCT +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTALLAQE*HVLQPA
Trigger: AGCAGGTTGTAGAACGTGGCATTCTTGGGCAAGTAG...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGGAGGACATGCTGCTaGCTCCTCCTGTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQRRTCC*LLLWHC
Trigger: ACAATGCCACAGGAGGAGGCAGCAGCATGTCCTCCT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTATGTGCTGTCTGGATTaGAGGGATGAGAGAGGCACT +
Preference number: 4 (lower is better)
Translates to: TKQYQDRIQMISPLWVLFMCCLD*RDERGT
Trigger: AGTGCCTCTCTCATCCCTGCAATCCAGACAGCACAT...AAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACCTTGCTGCTGCTTTTaGCTACCTGCGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQPCCCF*LPAPSH
Trigger: ATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCCTGGATCTCCGTTTTaGGCTGTCCACTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLPGSPF*AVHCFV
Trigger: TACAAAACAGTGGACAGCCCAAAACGGAGATCCAGG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATTTCCTACTGGGGAGTaGACTCCGACTCAGAGACCG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQFPTGE*TPTQRP
Trigger: CGGTCTCTGAGTCGGAGTCCACTCCCCAGTAGGAAA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTACTTCTGGACTTCATaGATTTCCTACTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITYFWTS*ISYWGV
Trigger: CACTCCCCAGTAGGAAATCCATGAAGTCCAGAAGTA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGACGACTGCGTGAACTaGATCTCTTCTTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQDDCVN*ISSFYY
Trigger: ATAGTAAAAAGAAGAGATCCAGTTCACGCAGTCGTC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGATGGTTCTGGAGAGTCTaGGGGAGACAGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRWFWRV*GRQIST
Trigger: GGTGGAGATCTGTCTCCCCCAGACTCTCCAGAACCA...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAACGAATGGCTGTGATTaGGAAGCCCTCTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGTNGCD*EALFLI
Trigger: AATGAGAAAGAGGGCTTCCCAATCACAGCCATTCGT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATATCAGGCCACACAGCTaGACAAGGGCTACCACAAAG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDIRPHS*TRATTK
Trigger: CTTTGTGGTAGCCCTTGTCCAGCTGTGTGGCCTGAT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTCTAGTGTCAGCATGTaGTCCAATAAATCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQSSVSM*SNKSSA
Trigger: AGCACTTGATTTATTGGACCACATGCTGACACTAGA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTAGTTTTGGATGGAGGTaGCTCTTCGACTACAACACC +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFSFGWR*LFDYNT
Trigger: GGTGTTGTAGTCGAAGAGCCACCTCCATCCAAAACT...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACTTTTCGAGAAGTTTTaGATGGAGGTGGCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGLFEKF*MEVALR
Trigger: TCGAAGAGCCACCTCCATCCAAAACTTCTCGAAAAG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTATGCTCAGGTCGGTTTaGCTCTGCAGCAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLMLRSV*LCSRFN
Trigger: ATTAAACCTGCTGCAGAGCCAAACCGACCTGAGCAT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGATCTGAGTCCTGCTGCTaGGAAGTAGCTTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRSESCC*EVASVR
Trigger: CCTGACGGAAGCTACTTCCCAGCAGCAGGACTCAGA...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCTCCAGACTGCCTGCTaGCTCTTGGGTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDLQTAC*LLGFHQ
Trigger: CTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAACTGGATGGAAGGATaGATAGGAAAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: AVISPLGMEASSLTTAQQNWMEG*IGKESF
Trigger: GAAAGATTCCTTTCCTATCCATCCTTCCATCCAGTT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAAGGGGGCCTCTTCTCTaGTGGAAGAATGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRRGPLL*WKNVRR
Trigger: CCTCCTCACATTCTTCCACCAGAGAAGAGGCCCCCT...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTACACATGCTGGGATGTaGGTATGTCAATACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSTHAGM*VCQYCS
Trigger: AGAACAGTATTGACATACCCACATCCCAGCATGTGT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACGGGGTGGGGGTGAGATaGGATCATACATACACATAC +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDGVGVR*DHTYTY
Trigger: GTATGTGTATGTATGATCCCATCTCACCCCCACCCC...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp ACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTCAGTGTTTGGACAGGTaGGATTTCCCACTGAACCTG +
Preference number: 4 (lower is better)
Translates to: TKQYQDRIQMISPLWVLFQCLDR*DFPLNL
Trigger: CAGGTTCAGTGGGAAATCCCACCTGTCCAAACACTG...AAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACCCTTCGGTCTAGTTTaGAGGCCATGTCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELPFGLV*RPCHRR
Trigger: TCTCCGATGACATGGCCTTCAAACTAGACCGAAGGG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACCCTTCGGTCTAGTTTaGAGGCCATGTCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRPFGLV*RPCHRR
Trigger: TCTCCGATGACATGGCCTTCAAACTAGACCGAAGGG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACTTGTGGAGCTTGGATaGCCTGGATTCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELLVELG*PGFLAA
Trigger: AGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGTTTCCCTTTTTCGATaGCTTTTACTCCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILVSLFR*LLLRSL
Trigger: CAAAGACCGGAGTAAAAGTCATCGAAAAAGGGAAAC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCCTTCTTTTTCCTACTaGGTTCAGCTCCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKPSFSY*VQLPDW
Trigger: CCAGTCTGGGAGCTGAACTCAGTAGGAAAAAGAAGG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGGCAAAAATACAGGTaGACCCTTGGACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDRQKYR*TLGLLS
Trigger: GGAAAGGAGTCCAAGGGTTCACCTGTATTTTTGCCT...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCAAAGGAGGCAACGTTaGAGTTTTCAGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLQRRQR*SFQVWN
Trigger: ATTCCACACCTGAAAACTTCAACGTTGCCTCCTTTG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATAGGTCTGTGAGTAAGTaGCGTGTCCTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDRSVSK*RVLCSF
Trigger: GAAGGAACAGAGGACACGTCACTTACTCACAGACCT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGAGAGGAAGGTCTGTaGGTAAGTGACGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGEEGL*VSDVSS
Trigger: AGAGGACACGTCACTTACTCACAGACCTTCCTCTCC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTTTTTATATGGTTGCTaGGGTGGTGTGATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISFLYGC*GGVIAF
Trigger: AAAGGCAATCACACCACCTCAGCAACCATATAAAAA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACACCTTTGTCCTTCTTaGAATCCAGTGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGHLCPS*NPVHLV
Trigger: AACAAGATGCACTGGATTTCAAGAAGGACAAAGGTG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCCTCAGTACTTGTCCCTaGGGTAGTTTCTTTTCGAGA +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTALSTCP*GSFFSR
Trigger: TCTCGAAAAGAAACTACCTCAGGGACAAGTACTGAG...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCCTGCTAGTAGCAAGTaGGCAAGGAATACAACGGAC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDPASSK*ARNTTD
Trigger: GTCCGTTGTATTCCTTGCTCACTTGCTACTAGCAGG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCAACTGACACTTTTCTaGTGCAGCATTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITQLTLF*CSILSQ
Trigger: TTGAGAGAGAATGCTGCATCAGAAAAGTGTCAGTTG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGTAGGAGTCATAATTaGTCGAGGTATGAGATCGTG +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILCRSHN*SRYEIV
Trigger: CACGATCTCATACCTCGAGCAATTATGACTCCTACA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGAGGCAGAGGTGGTTaGTGTGGAAGAGCTGGTATT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGGRGG*CGRAGI
Trigger: AATACCAGCTCTTCCACAGCAACCACCTCTGCCTCC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAATGGTCTCTGAGTCCTaGTGCTGGGAAGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELMVSES*CWEVAS
Trigger: GGAAGCTACTTCCCAGCAGCAGGACTCAGAGACCAT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGCATGTCAGCTGGTGTaGTTGAAGCTTCAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELACQLV*LKLQGS
Trigger: CGACCCTTGAAGCTTCAAGCACACCAGCTGACATGC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAACTGCCAATATATTCTaGATGTCAGCTGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGTANIF*MSAGVL
Trigger: AAGCACACCAGCTGACATGCAGAATATATTGGCAGT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTTCCTCCAGACTGCCTaGTGGCTCTTGGGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKFLQTA*WLLGFH
Trigger: ATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAGGAA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACCCAACCCCATGTCTTTaGAGTGTTTGGACTTATGCC +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDPTPCL*SVWTYA
Trigger: GGCATAAGTCCAAACACTCCAAAGACATGGGGTTGG...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAGCTCCCGTTCTTTCCTaGTCTTCTCCTTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRAPVLS*SSPCGA
Trigger: AGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGC...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATATTGGAGGCAAAGGTaGCAAAGGGGGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELYWRQR*QRGCLR
Trigger: CCTCAGACACCCCCTTTGCCACCTTTGCCTCCAATA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATGGTGTGATTGCCTTTaGTTCTGGAGAGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELWCDCL*FWRVWG
Trigger: CCCCCAGACTCTCCAGAACCAAAGGCAATCACACCA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCATATGGTTGCTGAGGTaGTGTGATTGCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAIWLLR*CDCLWF
Trigger: GAACCAAAGGCAATCACACCACCTCAGCAACCATAT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTGGTCTCTTTTTATATaGTTGCTGAGGTGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSWSLFI*LLRWCD
Trigger: ATCACACCACCTCAGCAACCATATAAAAAGAGACCA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCTAGTGTCAGCATGTaGTCCAATAAATCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSSVSM*SNKSSA
Trigger: AGCACTTGATTTATTGGACCACATGCTGACACTAGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTCTTTTCGAGAAGTTTTaGATGGAGGTGGCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFLFEKF*MEVALR
Trigger: TCGAAGAGCCACCTCCATCCAAAACTTCTCGAAAAG...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCATAGTTTTGCAATTTaGTCTCTGCATGTACCACAG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISHSFAI*SLHVPQ
Trigger: CTGTGGTACATGCAGAGACCAAATTGCAAAACTATG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ATGAAGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGATGATTTCCCCTCTCTaGGTCTTGTTTTTCACATTT +
Preference number: 4 (lower is better)
Translates to: MKEAGLQASNSGVSHSVWMISPL*VLFFTF
Trigger: AAATGTGAAAAACAAGACCCAGAGAGGGGAAATCAT...CCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACTCATTCGAACGCTTTaGACTTCCCGATATCCGGTC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELLIRTL*TSRYPV
Trigger: GACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGTTTCCCTTTTTCGATaGCTTTTACTCCGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLVSLFR*LLLRSL
Trigger: CAAAGACCGGAGTAAAAGTCATCGAAAAAGGGAAAC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATGGAAGCCTGACAGGTaGGATACTGGAATGACGACT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELWKPDR*DTGMTT
Trigger: AGTCGTCATTCCAGTATCTCACCTGTCAGGCTTCCA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACCTTCTTTTTCCTACTaGGTTCAGCTCCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQPSFSY*VQLPDW
Trigger: CCAGTCTGGGAGCTGAACTCAGTAGGAAAAAGAAGG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCAAAATCTGCTAGTTTaGTTTGCCCACTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: DTPNGGQKRERKESVSGTQNLLV*FAHCYS
Trigger: TGAATAACAGTGGGCAAATCAAACTAGCAGATTTTG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAAGTTCCAGATTGGCTTaGAAAATAGGCTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGSSRLA*KIGFFV
Trigger: CACAAAGAAGCCTATTTTTCAAGCCAATCTGGAACT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACCTGCTAGTAGCAAGTaGGCAAGGAATACAACGGAC +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRPASSK*ARNTTD
Trigger: GTCCGTTGTATTCCTTGCTCACTTGCTACTAGCAGG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTTTAACCTATGTTTCCTaGAGGTCTAAGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFLTYVS*RSKSVQ
Trigger: CTGCACAGACTTAGACCTTCAGGAAACATAGGTTAA...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGATGAAACTTGAGTTTTaGAAACTACCCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISMKLEF*KLPSKM
Trigger: CATCTTGGAGGGTAGTTTTCAAAACTCAAGTTTCAT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTATACAAGTGGTTGGGTaGTGTCTATGGCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLIQVVG*CLWHKL
Trigger: TAGCTTATGCCATAGACATCACCCAACCACTTGTAT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp CAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTTGTTTTTCACATTTaGGCTGCTGCATGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QIQEHKAIPGQDSNDFPSLVFHI*AAACAV
Trigger: GACAGCACATGCAGCAGCTCAAATGTGAAAAACAAG...AGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGAGACAACGGGGAGCTaGTCAAGTCTGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQETTGS*SSLFPL
Trigger: AAGAGGAAACAGACTTGAGCAGCTCCCCGTTGTCTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGAGTGTTTGGACTTATaGCGCTTGTGCTTCGATACC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDECLDL*RLCFDT
Trigger: GGTATCGAAGCACAAGCGGCATAAGTCCAAACACTC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTCATCGATCCCGACTTaGTGGAGACTTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDSSIPT*WRLLGF
Trigger: AAAGCCAAGAAGTCTCCAGCAAGTCGGGATCGATGA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGGAACCTGACTAAATaGTGGCTGAGAAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQRNLTK*WLRRRQ
Trigger: CTGCCTCCTTCTCAGCCAGCATTTAGTCAGGTTCCT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCACATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACTGGTCCTCAGAAAAGTaGACCAAACCAGATTCTAGC +
Preference number: 4 (lower is better)
Translates to: SHRNRSQNEKPPKLSHPDWSSEK*TKPDSS
Trigger: GCTAGAATCTGGTTTGGTGCACTTTTCTGAGGACCA...GTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCATGTACCACAGAATTaGTGCTTCCCTCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDHVPQN*CFPQPS
Trigger: TGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCTACTTGCCCAAGAATaGCACGTTCTACAACCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDLLAQE*HVLQPA
Trigger: AGCAGGTTGTAGAACGTGGCATTCTTGGGCAAGTAG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACTGGTCTTCTCCTTGTaGAGCTTGGATGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRLVFSL*SLDDLD
Trigger: ATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACACTTCTTTCGTAGCTaGACGACCGTCTCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELHFFRS*TTVSCY
Trigger: ATAGCAGGAGACGGTCGTCCAGCTACGAAAGAAGTG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAACCTGACTAAATGCTaGCTGAGAAGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQNLTKC*LRRRQR
Trigger: CCTCTGCCTCCTTCTCAGCCAGCATTTAGTCAGGTT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTAGGAAGAGTTTCTTTTaGACTATCCATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSRKSFF*TIHVII
Trigger: GATGATGACATGGATAGTCCAAAAGAAACTCTTCCT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTGGTCTCTTTTTATATaGTTGCTGAGGTGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITWSLFI*LLRWCD
Trigger: ATCACACCACCTCAGCAACCATATAAAAAGAGACCA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACTGCTGCTGCATCTCTaGGTTGGAGTGGATGTTAAG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQLLLHL*VGVDVK
Trigger: CTTAACATCCACTCCAACCCAGAGATGCAGCAGCAG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGGCTCTGCTTCAGGCTaGGATAAAAGTTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQGSASG*DKSCSK
Trigger: CTTGCTGCAACTTTTATCCCAGCCTGAAGCAGAGCC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTTCTTCACCAGGGTCTaGACCAAGGATTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKFFTRV*TKDSVK
Trigger: CTTGACAGAATCCTTGGTCCAGACCCTGGTGAAGAA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGAAAGATTCAGAGAACTaGATGGAAGGATGGATAGGA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILKDSEN*MEGWIG
Trigger: TCCTATCCATCCTTCCATCCAGTTCTCTGAATCTTT...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCCATCCAGGGGGAACTaGTGCCAACATCATTATTTC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKPSRGN*CQHHYF
Trigger: GAAATAATGATGTTGGCACCAGTTCCCCCTGGATGG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAATCAGTGTTTGGCCCTaGAGGCAAGGCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELISVWP*RQGQIK
Trigger: TTTGATCTGGCCTTGCCTCCAGGGCCAAACACTGAT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGTAGGGATGAGGGAATaGAGGCTTAAGTATATTATT +
Preference number: 4 (lower is better)
Translates to: NVLAIAHPGGTGANIIISVGMRE*RLKYII
Trigger: AATAATATACTTAAGCCTCCATTCCCTCATCCCTAC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACGAGGTATGAGATCGTaGGGGACTAAGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELRGMRS*GTKVII
Trigger: GATTATGACCTTAGTCCCTCACGATCTCATACCTCG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGGAATGACGACTGCGTaGACTGGATCTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDGMTTA*TGSLLF
Trigger: AAAAAGAAGAGATCCAGTTCACGCAGTCGTCATTCC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAGCAGATGTCTTTGAGTaGGTAGAAGGGGGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRADVFE*VEGGKV
Trigger: AACTTTGCCCCCTTCTACTCACTCAAAGACATCTGC...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCAAAATCTGCTAGTTTaGTTTGCCCACTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITQNLLV*FAHCYS
Trigger: TGAATAACAGTGGGCAAATCAAACTAGCAGATTTTG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGTAGCCAAATGCAGATaGTTACCTCGCTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELVAKCR*LPRSGK
Trigger: TTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTAC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATGCAGCAGCAGCAGCTaGTCTTTCCTTCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELCSSSS*SFLLFP
Trigger: AGGAAAAAGAAGGAAAGAGCAGCTGCTGCTGCTGCA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTAATCTCCTCTTTCAGTaGTATGGGTTTAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFNLLFQ*YGFRVS
Trigger: AGAGACTCTAAACCCATAGCACTGAAAGAGGAGATT...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTGGTCCTCAGAAAAGTaGACCAAACCAGATTCTAGC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDWSSEK*TKPDSS
Trigger: GCTAGAATCTGGTTTGGTGCACTTTTCTGAGGACCA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTCTGCTAGTTTGATTTaGCCACTGTTATTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSASLI*PLLFSK
Trigger: TTTGCTGAATAACAGTGGGCAAATCAAACTAGCAGA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGATGTTAAGCAGCTGTaGCATTTGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQDVKQL*HLRDAQ
Trigger: CTGAGCATCCCTCAAATGGCACAGCTGCTTAACATC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTAATAGAAGTTCTACTTaGAAATTTGTGCTAACTGCC +
Preference number: 4 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSNRSST*KFVLTA
Trigger: GGCAGTTAGCACAAATTTGCAAGTAGAACTTCTATT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACCAACCCCATGTCTTTaGAGTGTTTGGACTTATGCC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQPTPCL*SVWTYA
Trigger: GGCATAAGTCCAAACACTCCAAAGACATGGGGTTGG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAGGCTATCATCTTGTTTaGAGCTGTCAGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELGYHLV*SCQTTS
Trigger: GGAAGTGGTCTGACAGCTCCAAACAAGATGATAGCC...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGATATGGTTGCTGAGGTaGTGTGATTGCCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKIWLLR*CDCLWF
Trigger: GAACCAAAGGCAATCACACCACCTCAGCAACCATAT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGACGAATGGCTGTGATTaGGAAGCCCTCTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKTNGCD*EALFLI
Trigger: AATGAGAAAGAGGGCTTCCCAATCACAGCCATTCGT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAGTTTTGGATGGAGGTaGCTCTTCGACTACAACACC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELSFGWR*LFDYNT
Trigger: GGTGTTGTAGTCGAAGAGCCACCTCCATCCAAAACT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAATGCTCAGGTCGGTTTaGCTCTGCAGCAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELMLRSV*LCSRFN
Trigger: ATTAAACCTGCTGCAGAGCCAAACCGACCTGAGCAT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAGTTCAAGATGCTCAATaGGGAAAAAGTGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGVQDAQ*GKSVHL
Trigger: TAAGTGAACACTTTTTCCCCATTGAGCATCTTGAAC...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGCAGGGTACACATGCTaGGATGTGGGTATGTCAATA +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQAGYTC*DVGMSI
Trigger: TATTGACATACCCACATCCCAGCATGTGTACCCTGC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGACAAGATACACCCAATaGGGGTCAAAAACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKTRYTQ*GSKTRE
Trigger: CTCTCTCGTTTTTGACCCCCATTGGGTGTATCTTGT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATGTCGGAATCAGAGCTaGTATCATCATACTCCACCA +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELCRNQS*YHHTPP
Trigger: TGGTGGAGTATGATGATATCAGCTCTGATTCCGACA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACAAAGGAGGCAACGTTaGAGTTTTCAGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQQRRQR*SFQVWN
Trigger: ATTCCACACCTGAAAACTTCAACGTTGCCTCCTTTG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATGGGTTTTCATCAGCTaGCTCAAGAGAACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQWVFIS*LKRTAN
Trigger: ATTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGATGGGTTTTCATCAGCTaGCTCAAGAGAACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRWVFIS*LKRTAN
Trigger: ATTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCA...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTTGCCTCCCACTCATaGACAGAATCAGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFASHS*TESDFS
Trigger: TGAGAAATCTGATTCTGTTCATGAGTGGGAGGCAAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATACTGGAATGACGACTaGGTGAACTGGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELYWNDD*VNWISS
Trigger: AGAAGAGATCCAGTTCACGCAGTCGTCATTCCAGTA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCAAATCTTTAACAAGATaGTTCTCGGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAKSLTR*FSEFSS
Trigger: GGATGAGAACTCCGAGAAGCATCTTGTTAAAGATTT...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCGTCTCTTGTTCCCTGTaGTTTCAAATCTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: IEIEARMRSLPNYPILTAVSCSL*FQIFNK
Trigger: CTTGTTAAAGATTTGAAAGCACAGGGAACAAGAGAC...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAAGACGCCTTCGATATTaGTTCTTCGGTTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRRRLRY*FFGFMV
Trigger: CACCATGAAACCGAAGAAGCAATATCGAAGGCGTCT...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAAGGTCGGTTTGGCTCTaGAGCAGGTTTAATAACACT +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRRSVWL*SRFNNT
Trigger: AGTGTTATTAAACCTGCTGCAGAGCCAAACCGACCT...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ACAAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTCTGACTCAAGAGAACTaGCAATATATTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: TKQYQDRIQMISPLWVLFLTQEN*QYILHV
Trigger: GACATGCAGAATATATTGGCAGTTCTCTTGAGTCAG...AAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATACAACGGACAGCTTTaGAGTAGCCAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELYNGQL*SSQMQM
Trigger: CATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATCCAGGGGGAACTGGTaGCAACATCATTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQSRGNW*QHHYFV
Trigger: TACGAAATAATGATGTTGGCACCAGTTCCCCCTGGA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGATGAACGACTTGATATaGTCCTCAGAAAAGTGCACC +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKMNDLI*SSEKCT
Trigger: GGTGCACTTTTCTGAGGACCATATCAAGTCGTTCAT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAATGATTACCTCGCTCTaGCAAATGATTTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGMITSL*QMISLK
Trigger: CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCAT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCTTCGGTGGATTAACTaGCGAAGGATTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: CSSQMQMITSLWQMISLKLRWIN*RRILIS
Trigger: TGAAATCAAAATCCTTCGTCAGTTAATCCACCGAAG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCTTCGGTGGATTAACTaGCGAAGGATTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDLRWIN*RRILIS
Trigger: TGAAATCAAAATCCTTCGTCAGTTAATCCACCGAAG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACACCTTTGTCCTTCTTaGAATCCAGTGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELHLCPS*NPVHLV
Trigger: AACAAGATGCACTGGATTTCAAGAAGGACAAAGGTG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACAGGACTTCTACTTCTaGACTTCATGGATTTCCTAC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELQDFYF*TSWISY
Trigger: GTAGGAAATCCATGAAGTCCAGAAGTAGAAGTCCTG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCATAGTTTTGCAATTTaGTCTCTGCATGTACCACAG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDHSFAI*SLHVPQ
Trigger: CTGTGGTACATGCAGAGACCAAATTGCAAAACTATG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTATGATTACCTCGCTCTaGCAAATGATTTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLMITSL*QMISLK
Trigger: CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCAT...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATTTTTATATGGTTGCTaGGGTGGTGTGATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQFLYGC*GGVIAF
Trigger: AAAGGCAATCACACCACCTCAGCAACCATATAAAAA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAGTTCCAGATTGGCTTaGAAAATAGGCTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELSSRLA*KIGFFV
Trigger: CACAAAGAAGCCTATTTTTCAAGCCAATCTGGAACT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR TCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTACCCTCCAAGATGCTaGAGTATGTTTACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDYPPRC*SMFTFS
Trigger: AGAAAAAGTAAACATACTTCAGCATCTTGGAGGGTA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR TCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGACAGAAGGTTCAGATaGACTTTAATGCGATTTACC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQDRRFR*TLMRFT
Trigger: GGTAAATCGCATTAAAGTTCATCTGAACCTTCTGTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTCTCTTGTTCCCTGTaGTTTCAAATCTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVSCSL*FQIFNK
Trigger: CTTGTTAAAGATTTGAAAGCACAGGGAACAAGAGAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTCTGCTAGTTTGATTTaGCCACTGTTATTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDSASLI*PLLFSK
Trigger: TTTGCTGAATAACAGTGGGCAAATCAAACTAGCAGA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACTGACTCAAGAGAACTaGCAATATATTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: NTETVLSLFRSVSAGNELLTQEN*QYILHV
Trigger: GACATGCAGAATATATTGGCAGTTCTCTTGAGTCAG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR GCA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGACTGACTCAAGAGAACTaGCAATATATTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRLTQEN*QYILHV
Trigger: GACATGCAGAATATATTGGCAGTTCTCTTGAGTCAG...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGTCAAGGTGAAATTCTaGCAAACCTTTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQVKVKF*QTFTSI
Trigger: GATGGAAGTAAAGGTTTGGCAGAATTTCACCTTGAC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGACGACTGCGTGAACTaGATCTCTTCTTTTTACTAT +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQDDCVN*ISSFYY
Trigger: ATAGTAAAAAGAAGAGATCCAGTTCACGCAGTCGTC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATAGGAAGAGTTTCTTTTaGACTATCCATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDRKSFF*TIHVII
Trigger: GATGATGACATGGATAGTCCAAAAGAAACTCTTCCT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAACTGGATGGAAGGATaGATAGGAAAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQNWMEG*IGKESF
Trigger: GAAAGATTCCTTTCCTATCCATCCTTCCATCCAGTT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTTCAAGATGCTCAATaGGGAAAAAGTGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVQDAQ*GKSVHL
Trigger: TAAGTGAACACTTTTTCCCCATTGAGCATCTTGAAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CCA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTCTAACTGGACACACTaGTATAAAAAGCCATCAATG +
Preference number: 4 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDSNWTH*YKKPSM
Trigger: CATTGATGGCTTTTTATACCAGTGTGTCCAGTTAGA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
3UTR CAA 72 bp TTCAAAACCACAAAAATGATCACGGTCAAACCAGTTTaGCCTCCCACTCATGAACAGAATCAGATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FKTTKMITVKPV*PPTHEQNQISH
Trigger: ATGAGAAATCTGATTCTGTTCATGAGTGGGAGGCAAAACTGGTTTGACCGTGATCATTTTTGTGGTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR GCA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAAATCTTTAACAAGATaGTTCTCGGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQKSLTR*FSEFSS
Trigger: GGATGAGAACTCCGAGAAGCATCTTGTTAAAGATTT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS TCA 90 bp CGCCGAGCCAGTCCTCAGGCCCGGGCGCCGGGGAGGTCCAGGAAGTaGGAAGCCGACGGCCCGGGGCTGTGGAGCCGACTCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RRASPQARAPGRSRK*EADGPGLWSRLQLW
Trigger: CCAGAGCTGGAGTCGGCTCCACAGCCCCGGGCCGTCGGCTTCTCACTTCCTGGACCTCCCCGGCGCCCGGGCCTGAGGACTGGCTCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp TGGGGAGTGGACTCCGACTCAGAGACCGCTTGCTCAGGAAAGGGCTaGTGGACCGCCTTCGACCATAGGGACTGGGCGATCGCCCGCTGT +
Preference number: 5 (lower is better)
Translates to: WGVDSDSETACSGKG*WTAFDHRDWAIARC
Trigger: ACAGCGGGCGATCGCCCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp GGAGTGGACTCCGACTCAGAGACCGCTTGCTCAGGAAAGGGCTGCTaGACCGCCTTCGACCATAGGGACTGGGCGATCGCCCGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: GVDSDSETACSGKGC*TAFDHRDWAIARCK
Trigger: CTTACAGCGGGCGATCGCCCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp CCCCAAACTGGGAAGACTATAACGAGGAGCAGGCTGGGACCCAGGTaGCAGGGCATGGCGATGCTCCCAAGCCTGGCTGTGCCTACCCCT +
Preference number: 5 (lower is better)
Translates to: PQTGKTITRSRLGPR*QGMAMLPSLAVPTP
Trigger: AGGGGTAGGCACAGCCAGGCTTGGGAGCATCGCCATGCCCTGCCACCTGGGTCCCAGCCTGCTCCTCGTTATAGTCTTCCCAGTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS GCA 90 bp TGGGACCCAGGTGGCAGGGCATGGCGATGCTCCCAAGCCTGGCTGTaGCTACCCCTGCCCACAGGAAAGCTGAGAGAAGAATGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: WDPGGRAWRCSQAWL*LPLPTGKLREEWRE
Trigger: CTCTCTCCATTCTTCTCTCAGCTTTCCTGTGGGCAGGGGTAGGCACAGCCAGGCTTGGGAGCATCGCCATGCCCTGCCACCTGGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS TCA 90 bp GCTATAGGGACTGACAGATCTCTGTCGCCTACTGTAGGGGCTCGGTaGCCGGGTGCTGGACTGGTAGGCCGAAGGCTCCTTGTAAGGGGG +
Preference number: 5 (lower is better)
Translates to: AIGTDRSLSPTVGAR*PGAGLVGRRLLVRG
Trigger: CCCCCTTACAAGGAGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGTAGGCGACAGAGATCTGTCAGTCCCTATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp TTTGGACGGGGTCGGGTGGAGTACTCCATTGGTCTCAAGGCCTGGTaGTCATGTGGCAGGTGGCCAGGAGGCTCTGCTTCAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: FGRGRVEYSIGLKAW*SCGRWPGGSASGWD
Trigger: ATCCCAGCCTGAAGCAGAGCCTCCTGGCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp GCTTGCTCAGGAAAGGGCTGCTGGACCGCCTTCGACCATAGGGACTaGGCGATCGCCCGCTGTAAGAGCCACTTCTTTCGTAGCTGGACG +
Preference number: 5 (lower is better)
Translates to: ACSGKGCWTAFDHRD*AIARCKSHFFRSWT
Trigger: CGTCCAGCTACGAAAGAAGTGGCTCTTACAGCGGGCGATCGCCCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp CATTCCCACCGTTGCTCCTACCTGCTGCCTCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCTGTGGCCCACTGTTCTTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: HSHRCSYLLPPPVAL*EFFGAPVAHCSCHC
Trigger: ACAGTGACAAGAACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGGTAGGAGCAACGGTGGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS TCA 90 bp TACCAAGCGGTGACGCTCTCTGCTGTTAGAGCTGCCGCCTCCCGATaGCGGCTGCAAAGTTCCAGAAGCTCCTCCACTCCCGTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: YQAVTLSAVRAAASR*RLQSSRSSSTPVLL
Trigger: AAGAAGGACGGGAGTGGAGGAGCTTCTGGAACTTTGCAGCCGTCATCGGGAGGCGGCAGCTCTAACAGCAGAGAGCGTCACCGCTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp AGCCACTTCTTTCGTAGCTGGACGACCGTCTCCTGCTATAGGGACTaGCAGATCTCTGTCGCCTACTGTAGGGGCTCGGTGACCGGGTGC +
Preference number: 5 (lower is better)
Translates to: SHFFRSWTTVSCYRD*QISVAYCRGSVTGC
Trigger: GCACCCGGTCACCGAGCCCCTACAGTAGGCGACAGAGATCTGTCAGTCCCTATAGCAGGAGACGGTCGTCCAGCTACGAAAGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp TCCACCTCGCTATTCTCCATGCCAGAACGCAAAGTGGCCAGTGATTaGTGGGCCTGGGTTCCCGGTAACCGCACCCAGTGGCCCAATCCT +
Preference number: 5 (lower is better)
Translates to: STSLFSMPERKVASD*WAWVPGNRTQWPNP
Trigger: AGGATTGGGCCACTGGGTGCGGTTACCGGGAACCCAGGCCCATCAATCACTGGCCACTTTGCGTTCTGGCATGGAGAATAGCGAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558240.1
ENST00000585161.1
CDS GCA 90 bp TCATGGATTTCCTACTGGGGAGTGGACTCCGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGGACCGCCTTCGACCATAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SWISYWGVDSDSETA*SGKGCWTAFDHRDW
Trigger: CCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGTAGGAAATCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS GCA 90 bp ACTTCATGGATTTCCTGGGGAGTGGACTCCGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGGACCGCCTTCGACCATAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: TSWISWGVDSDSETA*SGKGCWTAFDHRDW
Trigger: CCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGGAAATCCATGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584632.5
CDS TCA 90 bp TTGGAGTGTTTGGACTTATGCCGCTTGTGCTTCGATACCAAGCGGTaGCGCTCTCTGCTGTTAGAGCTGCCGCCTCCCGATGACGGCTGC +
Preference number: 5 (lower is better)
Translates to: LECLDLCRLCFDTKR*RSLLLELPPPDDGC
Trigger: GCAGCCGTCATCGGGAGGCGGCAGCTCTAACAGCAGAGAGCGTCACCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp ACCGGGTGCTGGACTGGTAGGCCGAAGGCTCCTTGTAAGGGGGACTaGCCGACTGCCTTCTCGAGGTACTTCCAGGACTTTTCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: TGCWTGRPKAPCKGD*PTAFSRYFQDFSCR
Trigger: CCTACAAGAAAAGTCCTGGAAGTACCTCGAGAAGGCAGTCGGTCAGTCCCCCTTACAAGGAGCCTTCGGCCTACCAGTCCAGCACCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp GAAATGAGAGTTCCTCGGCAGTGGAGTTGCGAGACAACGGGGAGCTaGTCAAGTCTGTTTCCTCTTCTCCCTCCGCCGAGCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: EMRVPRQWSCETTGS*SSLFPLLPPPSQSS
Trigger: TGAGGACTGGCTCGGCGGAGGGAGAAGAGGAAACAGACTTGAGCAGCTCCCCGTTGTCTCGCAACTCCACTGCCGAGGAACTCTCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp GCATGTACCACAGAATTGCTGCTTCCCTCAGCCTTCAGGAATGGTTaGCCGACCACCGGGTGTAACGCTAAGGGGACCCTGGCAAAACGG +
Preference number: 5 (lower is better)
Translates to: ACTTELLLPSAFRNG*PTTGCNAKGTLAKR
Trigger: CCGTTTTGCCAGGGTCCCCTTAGCGTTACACCCGGTGGTCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp GAAGAATGTGAGGAGGACATGCTGCTGCCTCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCTGTGGCCCACTGTTCTTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EECEEDMLLPPPVAL*EFFGAPVAHCSCHC
Trigger: ACAGTGACAAGAACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGCATGTCCTCCTCACATTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS TCA 90 bp TGTGCCCTGGTAACTGCTGGACTCCCCAAGGTGGCTCAGAGAGCCTaGGAAGGTCCTGTTCTTCACCAGGGTCTGGACCAAGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: CALVTAGLPKVAQRA*EGPVLHQGLDQGFC
Trigger: ACAGAATCCTTGGTCCAGACCCTGGTGAAGAACAGGACCTTCTCAGGCTCTCTGAGCCACCTTGGGGAGTCCAGCAGTTACCAGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS GCA 90 bp GGTGCTTCCTTCAAAGACTCCTCTGGGGCCATGGTCTCTGAGTCCTaGTGCTGGGAAGTAGCTTCCGTCAGGGCACTGATGGATTGGTTC +
Preference number: 5 (lower is better)
Translates to: GASFKDSSGAMVSES*CWEVASVRALMDWF
Trigger: GAACCAATCCATCAGTGCCCTGACGGAAGCTACTTCCCAGCAGCAGGACTCAGAGACCATGGCCCCAGAGGAGTCTTTGAAGGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS CCA 90 bp GGGATGCTGCTTCGGGGGTCACCAACCCCATGTCTTTGGAGTGTTTaGACTTATGCCGCTTGTGCTTCGATACCAAGCGGTGACGCTCTC +
Preference number: 5 (lower is better)
Translates to: GMLLRGSPTPCLWSV*TYAACASIPSGDAL
Trigger: GAGAGCGTCACCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp CTGTGCCCAGGGATGCTGCTTCGGGGGTCACCAACCCCATGTCTTTaGAGTGTTTGGACTTATGCCGCTTGTGCTTCGATACCAAGCGGT +
Preference number: 5 (lower is better)
Translates to: LCPGMLLRGSPTPCL*SVWTYAACASIPSG
Trigger: ACCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp GTGGAGTACTCCATTGGTCTCAAGGCCTGGTGCTCATGTGGCAGGTaGCCAGGAGGCTCTGCTTCAGGCTGGGATAAAAGTTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: VEYSIGLKAWCSCGR*PGGSASGWDKSCSK
Trigger: CTTGCTGCAACTTTTATCCCAGCCTGAAGCAGAGCCTCCTGGCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp CAGGCCCATCAGTGTTTCCATAAGTCCTGTTTGGACGGGGTCGGGTaGAGTACTCCATTGGTCTCAAGGCCTGGTGCTCATGTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: QAHQCFHKSCLDGVG*STPLVSRPGAHVAG
Trigger: ACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACACTGATGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp AGTCTGAGGCCTCCATTCTTGGCATATCACTGCTCTTCCCCAAACTaGGAAGACTATAACGAGGAGCAGGCTGGGACCCAGGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SLRPPFLAYHCSSPN*EDYNEEQAGTQVAG
Trigger: CCCTGCCACCTGGGTCCCAGCCTGCTCCTCGTTATAGTCTTCCCAGTTTGGGGAAGAGCAGTGATATGCCAAGAATGGAGGCCTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS-3UTR CAA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATGCTGCATCTCTGGGTaGGAGTGGATGTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWACCISG*EWMLSS
Trigger: GCTGCTTAACATCCACTCCAACCCAGAGATGCAGCA...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCAACTGCCTGCTGGCTCTaGGGTTTTCATCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWATACWL*GFHQLT
Trigger: AGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGT...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS TCA 90 bp GTCTGTTTAGCTTTTAGTAAGTCCCGGGAACGCCTGTGCTGGTGGTaGCGATGTTTGTGCAGGCGGTCGCTCCGATCTGATCCACGACGT +
Preference number: 5 (lower is better)
Translates to: VCLAFSKSRERLCWW*RCLCRRSLRSDPRR
Trigger: ACGTCGTGGATCAGATCGGAGCGACCGCCTGCACAAACATCGTCACCACCAGCACAGGCGTTCCCGGGACTTACTAAAAGCTAAACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp CTTCAGCTCCCGTTCTTTCCTGGTCTTCTCCTTGTGGAGCTTGGATaGCCTGGATTCCTTGCTGCTGCTTTTGGCTACCTGCGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LQLPFFPGLLLVELG*PGFLAAAFGYLRLP
Trigger: GGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp GGTGAAGGAGCGAGGGAAGAAATGAGAGTTCCTCGGCAGTGGAGTTaGGAGACAACGGGGAGCTGCTCAAGTCTGTTTCCTCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: GEGAREEMRVPRQWS*ETTGSCSSLFPLLP
Trigger: AGGGAGAAGAGGAAACAGACTTGAGCAGCTCCCCGTTGTCTCGCAACTCCACTGCCGAGGAACTCTCATTTCTTCCCTCGCTCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp CAGCTGCTGCTGCATCTCTGGGTTGGAGTGGATGTTAAGCAGCTGTaGCATTTGAGGGATGCTCAGGTCGGTTTGGCTCTGCAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: QLLLHLWVGVDVKQL*HLRDAQVGLALQQV
Trigger: AACCTGCTGCAGAGCCAAACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTTAACATCCACTCCAACCCAGAGATGCAGCAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS GCA 90 bp GCTTCCGTCAGGGCACTGATGGATTGGTTCAGGGCTTCCAGCTGCTaGTGCATCTCTGGGTTGGAGTGGATGTTAAGCAGCTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: ASVRALMDWFRASSC*CISGLEWMLSSCAI
Trigger: AATGGCACAGCTGCTTAACATCCACTCCAACCCAGAGATGCAGCAGCAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCTGACGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS CCA 90 bp ATATGGTTGCTGAGGTGGTGTGATTGCCTTTGGTTCTGGAGAGTCTaGGGGAGACAGATCTCCACCAGGGAGCTCTGGAGGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: IWLLRWCDCLWFWRV*GRQISTRELWRERK
Trigger: CTTCCTCTCCCTCCAGAGCTCCCTGGTGGAGATCTGTCTCCCCCAGACTCTCCAGAACCAAAGGCAATCACACCACCTCAGCAACCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp TACTTGTGGGGAAGGATGAAGACTGACAAGTTCTCCCCATCCCAGTaGCATTCTCAGGGTCAGGGTGGTGACCGAGGCTGGAATCTTGGG +
Preference number: 5 (lower is better)
Translates to: YLWGRMKTDKFSPSQ*HSQGQGGDRGWNLG
Trigger: CCCAAGATTCCAGCCTCGGTCACCACCCTGACCCTGAGAATGCCACTGGGATGGGGAGAACTTGTCAGTCTTCATCCTTCCCCACAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558240.1
ENST00000559545.5
CDS-3UTR CAA 90 bp AGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGGCATGTCTCACACAGTGTTaGGACAGGTGGGATTTCCCA +
Preference number: 5 (lower is better)
Translates to: SKKGGGRHRRLVTCPIWACLTQC*DRWDFP
Trigger: TGGGAAATCCCACCTGTCCAAACACTGTGTGAGACA...TGCCCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp GCAAGCAAGAAAGGTGGGGGTAGACACAGGAGGCTGGTGACCTGTCCCATCTGGATGAAGGAAGCAGGCTaGCAGGCCTCTAATTCTGGT +
Preference number: 5 (lower is better)
Translates to: ASKKGGGRHRRLVTCPIWMKEAG*QASNSG
Trigger: ACCAGAATTAGAGGCCTGCAAGCCTGCTTCCTTCAT...CCAGATGGGACAGGTCACCAGCCTCCTGTGTCTACCCCCACCTTTCTTGCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS CCA 90 bp GCTCCCGTTCTTTCCTGGTCTTCTCCTTGTGGAGCTTGGATGACCTaGATTCCTTGCTGCTGCTTTTGGCTACCTGCGCCTTCCCATAGT +
Preference number: 5 (lower is better)
Translates to: APVLSWSSPCGAWMT*IPCCCFWLPAPSHS
Trigger: ACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp ACTGAACCCTGTTTCAGGCCCATCAGTGTTTCCATAAGTCCTGTTTaGACGGGGTCGGGTGGAGTACTCCATTGGTCTCAAGGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TEPCFRPISVSISPV*TGSGGVLHWSQGLV
Trigger: CACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACACTGATGGGCCTGAAACAGGGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS-3UTR CAA 90 bp CAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACCAGGGCACTGATGGATaGGTTCAGGGCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QASNSGVSHSVWTGGISHQGTDG*VQGFQL
Trigger: CAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCTG...GTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp TTTCCCCTCTCTGGGTCTTGTTTTTCACATTTGAGCTGCTGCATGTGCTGTCTGCCTCCTCCTGTGGCATaGTGGGAGTTCTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: FPLSGSCFSHLSCCMCCLPPPVA*WEFFGA
Trigger: GGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGG...CAGACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp GTGGGATTTCCCACTGAACCTGGCTTGGCTTTAGGTTCTGTGAAAGAGACTGAAAGGGCATTCCCACCGTaGCTCCTACCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGFPTEPGLALGSVKETERAFPP*LLPAAS
Trigger: GGAGGCAGCAGGTAGGAGCAACGGTGGGAATGCCCT...TTCAGTCTCTTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGGAAATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS GCA 90 bp TCCTGGTCTTCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTaGTGCTTTTGGCTACCTGCGCCTTCCCATAGTCATCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SWSSPCGAWMTWIPC*CFWLPAPSHSHQSP
Trigger: AGGAGACTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp GCTCCCCATAGTTTTGCAATTTGGTCTCTGCATGTACCACAGAATTaGTGCTTCCCTCAGCCTTCAGGAATGGTTGCCCGACCACCGGGT +
Preference number: 5 (lower is better)
Translates to: APHSFAIWSLHVPQN*CFPQPSGMVARPPG
Trigger: ACCCGGTGGTCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATGCAGAGACCAAATTGCAAAACTATGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp TTGTGCCCAGACTTCAGCTCCCGTTCTTTCCTGGTCTTCTCCTTGTaGAGCTTGGATGACCTGGATTCCTTGCTGCTGCTTTTGGCTACC +
Preference number: 5 (lower is better)
Translates to: LCPDFSSRSFLVFSL*SLDDLDSLLLLLAT
Trigger: GGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTCTGGGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp AGGTGGCTCAGAGAGCCTGAGAAGGTCCTGTTCTTCACCAGGGTCTaGACCAAGGATTCTGTCAAGGCTGGACCAGAGTTTCGTTCATCA +
Preference number: 5 (lower is better)
Translates to: RWLREPEKVLFFTRV*TKDSVKAGPEFRSS
Trigger: TGATGAACGAAACTCTGGTCCAGCCTTGACAGAATCCTTGGTCCAGACCCTGGTGAAGAACAGGACCTTCTCAGGCTCTCTGAGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCCTCGGCAGTGGAGTaGCGAGACAACGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSSAVE*RDNGEL
Trigger: CAGCTCCCCGTTGTCTCGCAACTCCACTGCCGAGGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCACAAGCAGCTGTGCCATTaGAGGGATGCTCAGGTCGGT +
Preference number: 5 (lower is better)
Translates to: QASNSGVSHSVWTGGISHKQLCH*RDAQVG
Trigger: ACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTT...GTGGGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACCTCCTCCTGTGGCATaGTGGGAGTTCTTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGPPPVA*WEFFGA
Trigger: GGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGCCTCACGCCCCCTTaGTCCCTCGCTCCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILCLTPP*SLAPEV
Trigger: TACCTCAGGAGCGAGGGACAAAGGGGGCGTGAGGCA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS TCA 90 bp TACCTGCGCCTTCCCATAGTCATCAGTCTCCTCATTCGAACGCTTTaGACTTCCCGATATCCGGTCCTTCATCGATCCCGACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: YLRLPIVISLLIRTL*TSRYPVLHRSRLAG
Trigger: TCCAGCAAGTCGGGATCGATGAAGGACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGGAGACTGATGACTATGGGAAGGCGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp GAGACAGATCTCCACCAGGGAGCTCTGGAGGGAGAGGAAGGTCTGTaGGTAAGTGACGTGTCCTCTGTTCCTTCTCTTTCTTCACAGGTT +
Preference number: 5 (lower is better)
Translates to: ETDLHQGALEGEEGL*VSDVSSVPSLSSQV
Trigger: AACCTGTGAAGAAAGAGAAGGAACAGAGGACACGTCACTTACTCACAGACCTTCCTCTCCCTCCAGAGCTCCCTGGTGGAGATCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp GTTTTGGATGGAGGTGGCTCTTCGACTACAACACCACTTTGTCGCTaGCGTCGCCGTTTCTTACTCCACAACTCATGGCAATCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLDGGGSSTTTPLCR*RRRFLLHNSWQSCQ
Trigger: CTGGCAGGATTGCCATGAGTTGTGGAGTAAGAAACGGCGACGTCAGCGACAAAGTGGTGTTGTAGTCGAAGAGCCACCTCCATCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp TGGTCTTCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTGCTaGTTTTGGCTACCTGCGCCTTCCCATAGTCATCAGTCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WSSPCGAWMTWIPCC*FWLPAPSHSHQSPH
Trigger: ATGAGGAGACTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp CTTTCCTGGTCTTCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTaGTGCTGCTTTTGGCTACCTGCGCCTTCCCATAGTCATCAGTCT +
Preference number: 5 (lower is better)
Translates to: LSWSSPCGAWMTWIP*CCFWLPAPSHSHQS
Trigger: AGACTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp CCCCATAGTTTTGCAATTTGGTCTCTGCATGTACCACAGAATTGCTaGTTCCCTCAGCCTTCAGGAATGGTTGCCCGACCACCGGGTGTA +
Preference number: 5 (lower is better)
Translates to: PHSFAIWSLHVPQNC*FPQPSGMVARPPGV
Trigger: TACACCCGGTGGTCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATGCAGAGACCAAATTGCAAAACTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 90 bp TCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTGCTGCTTTTaGCTACCTGCGCCTTCCCATAGTCATCAGTCTCCTCATTCGAAC +
Preference number: 5 (lower is better)
Translates to: SPCGAWMTWIPCCCF*LPAPSHSHQSPHSN
Trigger: GTTCGAATGAGGAGACTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp TTTTACTCCGGTCTTTGTGCCCAGACTTCAGCTCCCGTTCTTTCCTaGTCTTCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FYSGLCAQTSAPVLS*SSPCGAWMTWIPCC
Trigger: GCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTCTGGGCACAAAGACCGGAGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp TCTCTTTTTATATGGTTGCTGAGGTGGTGTGATTGCCTTTGGTTCTaGAGAGTCTGGGGGAGACAGATCTCCACCAGGGAGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLFIWLLRWCDCLWF*RVWGRQISTRELWR
Trigger: CCTCCAGAGCTCCCTGGTGGAGATCTGTCTCCCCCAGACTCTCCAGAACCAAAGGCAATCACACCACCTCAGCAACCATATAAAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 90 bp GGTCCTGTTCTTCACCAGGGTCTGGACCAAGGATTCTGTCAAGGCTaGACCAGAGTTTCGTTCATCAGTGTCAATGGCACTGAACCCTGT +
Preference number: 5 (lower is better)
Translates to: GPVLHQGLDQGFCQG*TRVSFISVNGTEPC
Trigger: ACAGGGTTCAGTGCCATTGACACTGATGAACGAAACTCTGGTCCAGCCTTGACAGAATCCTTGGTCCAGACCCTGGTGAAGAACAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCCTTGCTGCTGCTTTaGGCTACCTGCGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSLLLL*ATCAFP
Trigger: TGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCGACTCAGAGACCGCTaGCTCAGGAAAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILRLRDR*LRKGLL
Trigger: CAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTGTCAGCAAGGCCTATaGCATCCCCAGCCCCAGACT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSCQQGL*HPQPQT
Trigger: AGTCTGGGGCTGGGGATGCAATAGGCCTTGCTGACA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAAGCAGCTGTGCCATTaGAGGGATGCTCAGGTCGGT +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQKQLCH*RDAQVG
Trigger: ACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCCAGGGCACTGATGGATaGGTTCAGGGCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DTPNGGQKRERKESVSGTQGTDG*VQGFQL
Trigger: CAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCTG...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS TCA 90 bp TGCTGCATCTCTGGGTTGGAGTGGATGTTAAGCAGCTGTGCCATTTaGGGGATGCTCAGGTCGGTTTGGCTCTGCAGCAGGTTTAATAAC +
Preference number: 5 (lower is better)
Translates to: CCISGLEWMLSSCAI*GMLRSVWLCSRFNN
Trigger: GTTATTAAACCTGCTGCAGAGCCAAACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTTAACATCCACTCCAACCCAGAGATGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS GCA 90 bp CTGTGGCCCACTGTTCTTGTCACTGTTGTTTTCCTCCAGACTGCCTaGTGGCTCTTGGGTTTTCATCAGCTGACTCAAGAGAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: LWPTVLVTVVFLQTA*WLLGFHQLTQENCQ
Trigger: TTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACAACAGTGACAAGAACAGTGGGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACCACTCCCGTCCTTCTaGCCCCCATGTCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGPLPSF*PPCLSE
Trigger: TTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTGG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTTGGACTTATGCCGCTaGTGCTTCGATACCAAGCGG +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQLDLCR*CFDTKR
Trigger: CCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCGACTCAGAGACCGCTaGCTCAGGAAAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLRLRDR*LRKGLL
Trigger: CAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTGTCAGCAAGGCCTATaGCATCCCCAGCCCCAGACT +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITCQQGL*HPQPQT
Trigger: AGTCTGGGGCTGGGGATGCAATAGGCCTTGCTGACA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTAAGCAGCTGTGCCATTaGAGGGATGCTCAGGTCGGT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSKQLCH*RDAQVG
Trigger: ACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGTGTCAGCTGGTGTGCTaGAAGCTTCAAGGGTCGTCT +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQCQLVC*KLQGSS
Trigger: AGACGACCCTTGAAGCTTCAAGCACACCAGCTGACA...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCTGTCAGCTGGTGTGCTaGAAGCTTCAAGGGTCGTCT +
Preference number: 5 (lower is better)
Translates to: LQASNSGVSHSVWTGGISCQLVC*KLQGSS
Trigger: AGACGACCCTTGAAGCTTCAAGCACACCAGCTGACA...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGACTGCCTGCTGGCTCTaGGGTTTTCATCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQTACWL*GFHQLT
Trigger: AGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGGGTGGAGTACTCCATaGGTCTCAAGGCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITGWSTP*VSRPGA
Trigger: AGCACCAGGCCTTGAGACCAATGGAGTACTCCACCC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS GCA 90 bp ATCATCATACTCCACCAAAGGTTTGATAACTGTGCCCAGGGATGCTaGTTCGGGGGTCACCAACCCCATGTCTTTGGAGTGTTTGGACTT +
Preference number: 5 (lower is better)
Translates to: IIILHQRFDNCAQGC*FGGHQPHVFGVFGL
Trigger: AAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTATGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 90 bp GATATCATCATACTCCACCAAAGGTTTGATAACTGTGCCCAGGGATaGTGCTTCGGGGGTCACCAACCCCATGTCTTTGGAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: DIIILHQRFDNCAQG*CFGGHQPHVFGVFG
Trigger: TCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTATGATGATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTCCTCGGCAGTGGAGTaGCGAGACAACGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKSSAVE*RDNGEL
Trigger: CAGCTCCCCGTTGTCTCGCAACTCCACTGCCGAGGA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTTGGACTTATGCCGCTaGTGCTTCGATACCAAGCGG +
Preference number: 5 (lower is better)
Translates to: DTPNGGQKRERKESVSGTLDLCR*CFDTKR
Trigger: CCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCTCCCTTCGGTCTAGTTaGAAGGCCATGTCATCGGAG +
Preference number: 5 (lower is better)
Translates to: DTPNGGQKRERKESVSGTSLRSS*KAMSSE
Trigger: CTCCGATGACATGGCCTTCAAACTAGACCGAAGGGA...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCTTTTACTCCGGTCTTaGTGCCCAGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLLLRS*CPDFSS
Trigger: GGAGCTGAAGTCTGGGCACAAAGACCGGAGTAAAAG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGGGCTATCATCTTGTTaGGAGCTGTCAGACCACTTC +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQGLSSC*ELSDHF
Trigger: GAAGTGGTCTGACAGCTCCAAACAAGATGATAGCCC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGACTACAACACCACTTaGTCGCTGACGTCGCCGTTT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSDYNTT*SLTSPF
Trigger: AAACGGCGACGTCAGCGACAAAGTGGTGTTGTAGTC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTCAGGGCACTGATGGATaGGTTCAGGGCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLQGTDG*VQGFQL
Trigger: CAGCTGGAAGCCCTGAACCAATCCATCAGTGCCCTG...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTGGGTGGAGTACTCCATaGGTCTCAAGGCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFGWSTP*VSRPGA
Trigger: AGCACCAGGCCTTGAGACCAATGGAGTACTCCACCC...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATTCCATAAGTCCTGTTaGGACGGGGTCGGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGFHKSC*DGVGWS
Trigger: ACTCCACCCGACCCCGTCCAAACAGGACTTATGGAA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AGGAAGCAGGCTTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGTCCCCTCTCTGGGTCTaGTTTTTCACATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RKQACRPLILVSHTVFGQSPLWV*FFTFEL
Trigger: CAGCTCAAATGTGAAAAACAAGACCCAGAGAGGGGA...CTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAAGCCTGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp TTGCAGGCCTCTAATTCTGGTGTCTCACACAGTGTTTGGACAGGTGGGATTTCCCCCACTGAACCTGGCTaGGCTTTAGGTTCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LQASNSGVSHSVWTGGISPTEPG*ALGSVK
Trigger: TTTCACAGAACCTAAAGCCAAGCCAGGTTCAGTGGG...GGAAATCCCACCTGTCCAAACACTGTGTGAGACACCAGAATTAGAGGCCTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS TCA 90 bp CTGTCAAGGCTGGACCAGAGTTTCGTTCATCAGTGTCAATGGCACTaGACCCTGTTTCAGGCCCATCAGTGTTTCCATAAGTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LSRLDQSFVHQCQWH*TLFQAHQCFHKSCL
Trigger: CAAACAGGACTTATGGAAACACTGATGGGCCTGAAACAGGGTTCAGTGCCATTGACACTGATGAACGAAACTCTGGTCCAGCCTTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS TCA 90 bp AACAGCCTCACCTTATATTCTGGCTGTGATTTTGGGCTCCAGACCTaGGTCAACCAGTATAGTTCCAATCCGTTTGGAGGTCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: NSLTLYSGCDFGLQT*VNQYSSNPFGGPGS
Trigger: ACTGCCAGGACCTCCAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGGTGAGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS GCA 90 bp GCTGACTCAAGAGAACTGCCAATATATTCTGCATGTCAGCTGGTGTaGTTGAAGCTTCAAGGGTCGTCTGTTCTGCTGAAGGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: ADSRELPIYSACQLV*LKLQGSSVLLKAGS
Trigger: TGATCCTGCCTTCAGCAGAACAGACGACCCTTGAAGCTTCAAGCACACCAGCTGACATGCAGAATATATTGGCAGTTCTCTTGAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCCATGTCTCTCTGAATaGGGCATTCCCTTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITPCLSE*GIPFPL
Trigger: CAGGGGAAAGGGAATGCCCAATTCAGAGAGACATGG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGACCAACCCCATGTCTTaGGAGTGTTTGGACTTATGC +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQTNPMS*ECLDLC
Trigger: GCATAAGTCCAAACACTCCAAAGACATGGGGTTGGT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGATCCCTTCGGTCTAGTTaGAAGGCCATGTCATCGGAG +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGSLRSS*KAMSSE
Trigger: CTCCGATGACATGGCCTTCAAACTAGACCGAAGGGA...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTCCTCATTCGAACGCTTaGAACTTCCCGATATCCGGT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSPHSNA*NFPISG
Trigger: ACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGG...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGGATGACCTGGATTCCTaGCTGCTGCTTTTGGCTACC +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILDDLDS*LLLLAT
Trigger: GGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATC...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTTCCTGGATCTCCGTTTaGGGCTGTCCACTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSWISV*GCPLFC
Trigger: ACAAAACAGTGGACAGCCCAAAACGGAGATCCAGGA...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGGCAAAGGAGGCAACGTaGAAGTTTTCAGGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQAKEAT*KFSGVE
Trigger: TTCCACACCTGAAAACTTCAACGTTGCCTCCTTTGC...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTGTCAGCTGGTGTGCTaGAAGCTTCAAGGGTCGTCT +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILCQLVC*KLQGSS
Trigger: AGACGACCCTTGAAGCTTCAAGCACACCAGCTGACA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS TCA 90 bp TTGTTTTCCTCCAGACTGCCTGCTGGCTCTTGGGTTTTCATCAGCTaGCTCAAGAGAACTGCCAATATATTCTGCATGTCAGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LFSSRLPAGSWVFIS*LKRTANIFCMSAGV
Trigger: CACACCAGCTGACATGCAGAATATATTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS TCA 90 bp TGTTTATCTTTTCTTCAAGCAAAAAGAAGAAGCAGAGCTGTAGCGTaGAGTCACCTTGGCCTGGCTGCCTGGCAGGCAGTGAATAGGGTA +
Preference number: 5 (lower is better)
Translates to: CLSFLQAKRRSRAVA*SHLGLAAWQAVNRV
Trigger: TACCCTATTCACTGCCTGCCAGGCAGCCAGGCCAAGGTGACTTCACGCTACAGCTCTGCTTCTTCTTTTTGCTTGAAGAAAAGATAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS-3UTR CAA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTCCATGTCTCTCTGAATaGGGCATTCCCTTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFPCLSE*GIPFPL
Trigger: CAGGGGAAAGGGAATGCCCAATTCAGAGAGACATGG...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGACCAACCCCATGTCTTaGGAGTGTTTGGACTTATGC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISTNPMS*ECLDLC
Trigger: GCATAAGTCCAAACACTCCAAAGACATGGGGTTGGT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTTCATCGATCCCGACTaGCTGGAGACTTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILFIDPD*LETSWL
Trigger: AAGCCAAGAAGTCTCCAGCAAGTCGGGATCGATGAA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGACCTCATTCGAACGCTTaGAACTTCCCGATATCCGGT +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGPHSNA*NFPISG
Trigger: ACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGG...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CACATGCTGGGATGTGGGTATGTCAATACTGTTCTTCCTCACAGTATGCTGTTTCTTTTACTCCGGTCTTaGTGCCCAGACTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HMLGCGYVNTVLPHSMLFLLLRS*CPDFSS
Trigger: GGAGCTGAAGTCTGGGCACAAAGACCGGAGTAAAAG...AAACAGCATACTGTGAGGAAGAACAGTATTGACATACCCACATCCCAGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCGGGCTATCATCTTGTTaGGAGCTGTCAGACCACTTC +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITGLSSC*ELSDHF
Trigger: GAAGTGGTCTGACAGCTCCAAACAAGATGATAGCCC...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGTGGAAGAGCTGGTATaGGAGGCAAAGGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLVEELV*EAKVAK
Trigger: CTTTGCCACCTTTGCCTCCAATACCAGCTCTTCCAC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGCCTGTGTCTTTGTCCTaGGCTTTATATACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQPVSLS*ALYTWP
Trigger: TGGCCAAGTATATAAAGCCAAGGACAAAGACACAGG...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTGCTGCATCTCTGGGTaGGAGTGGATGTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLCCISG*EWMLSS
Trigger: GCTGCTTAACATCCACTCCAACCCAGAGATGCAGCA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ATAGAAATAGAAGCCAGAATGAGAAGCCTCCCAAATTATCCCATCCTGACAGCCTGCTGCATCTCTGGGTaGGAGTGGATGTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: IEIEARMRSLPNYPILTACCISG*EWMLSS
Trigger: GCTGCTTAACATCCACTCCAACCCAGAGATGCAGCA...GGCTGTCAGGATGGGATAATTTGGGAGGCTTCTCATTCTGGCTTCTATTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGTAAAGTCTACCTACTaGCCCAAGAATGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISVKSTY*PKNATF
Trigger: GAACGTGGCATTCTTGGGCAAGTAGGTAGACTTTAC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS TCA 90 bp AGGACTTTTCTTGTAGGAGTCATAATTGCTCGAGGTATGAGATCGTaGGGGACTAAGGTCATAATCTTGGCCATAAGAAGCTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: RTFLVGVIIARGMRS*GTKVIILAIRSSRG
Trigger: CCCTCGGGAGCTTCTTATGGCCAAGATTATGACCTTAGTCCCTCACGATCTCATACCTCGAGCAATTATGACTCCTACAAGAAAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 90 bp TCGGTTTGGCTCTGCAGCAGGTTTAATAACACTGCCAATTCACTTTaGTTCAGCTGTTGTGTGATGTCAGCAAGGCCTATTGCATCCCCA +
Preference number: 5 (lower is better)
Translates to: SVWLCSRFNNTANSL*FSCCVMSARPIASP
Trigger: TGGGGATGCAATAGGCCTTGCTGACATCACACAACAGCTGAATCAAAGTGAATTGGCAGTGTTATTAAACCTGCTGCAGAGCCAAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAATGTCTTTGGAGTGTTaGGACTTATGCCGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGMSLEC*DLCRLC
Trigger: GCACAAGCGGCATAAGTCCAAACACTCCAAAGACAT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTACTCCACCAAAGGTTaGATAACTGTGCCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILYSTKG*ITVPRD
Trigger: ATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTACTCCACCAAAGGTTaGATAACTGTGCCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITYSTKG*ITVPRD
Trigger: ATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAATCCTTGCTGCTGCTTTaGGCTACCTGCGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQSLLLL*ATCAFP
Trigger: TGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGA...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCCTGGATCTCCGTTTaGGGCTGTCCACTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSWISV*GCPLFC
Trigger: ACAAAACAGTGGACAGCCCAAAACGGAGATCCAGGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTACTAAGGTCATAATCTaGGCCATAAGAAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSTKVII*AIRSSR
Trigger: TCGGGAGCTTCTTATGGCCAAGATTATGACCTTAGT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCAATACAGGTGAACCCTaGGACTCCTTTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITNTGEP*DSFPSI
Trigger: GATGGATGGAAAGGAGTCCAAGGGTTCACCTGTATT...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCCAATAATGTCAAACTaGTCCACACAGCGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILPIMSN*STQRFP
Trigger: GGGGAAACGCTGTGTGGACAAGTTTGACATTATTGG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCTTGGCTTTATATACTaGGCCATAGGTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISLGFIY*AIGSFS
Trigger: GGAGAAGGAACCTATGGCCAAGTATATAAAGCCAAG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTCTTGGCTTTATATACTaGGCCATAGGTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSLGFIY*AIGSFS
Trigger: GGAGAAGGAACCTATGGCCAAGTATATAAAGCCAAG...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GATACACCCAATGGGGGTCAAAAACGAGAGAGAAAGGAATCAGTGTCAGGAACCAAGCCCTCTTTCTCATaGTCTAGTCTCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: DTPNGGQKRERKESVSGTKPSFS*SSLTFF
Trigger: GAAGAAGGTGAGACTAGACAATGAGAAAGAGGGCTT...GGTTCCTGACACTGATTCCTTTCTCTCTCGTTTTTGACCCCCATTGGGTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCTCTTTTCGAGAAGTTTaGGATGGAGGTGGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITSFREV*DGGGSS
Trigger: CGAAGAGCCACCTCCATCCAAAACTTCTCGAAAAGA...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTCCATAAGTCCTGTTaGGACGGGGTCGGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFHKSC*DGVGWS
Trigger: ACTCCACCCGACCCCGTCCAAACAGGACTTATGGAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS TCA 90 bp GTTTTTCACATCTTATATTCTGGCTGTGATTTTGGGCTCCAGACCTaGGTCAACCAGTATAGTTCCAATCCGTTTGGAGGTCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: VFHILYSGCDFGLQT*VNQYSSNPFGGPGS
Trigger: ACTGCCAGGACCTCCAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGATGTGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGATGACCTGGATTCCTaGCTGCTGCTTTTGGCTACC +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKDDLDS*LLLLAT
Trigger: GGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTTCCTGGTCTTCTCCTaGTGGAGCTTGGATGACCTG +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKFLVFS*WSLDDL
Trigger: CAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGCGAGGGGCTATCATCTaGTTTGGAGCTGTCAGACCA +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKRGAII*FGAVRP
Trigger: TGGTCTGACAGCTCCAAACAAGATGATAGCCCCTCG...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAACTAAGGTCATAATCTaGGCCATAAGAAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGTKVII*AIRSSR
Trigger: TCGGGAGCTTCTTATGGCCAAGATTATGACCTTAGT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTCTCTTTTTATATGGTaGCTGAGGTGGTGTGATTGC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSLFIW*LRWCDC
Trigger: GCAATCACACCACCTCAGCAACCATATAAAAAGAGA...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCCCTGTGTCTTTGTCCTaGGCTTTATATACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITPVSLS*ALYTWP
Trigger: TGGCCAAGTATATAAAGCCAAGGACAAAGACACAGG...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAAAGCCCTCTTTCTCATaGTCTAGTCTCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGKPSFS*SSLTFF
Trigger: GAAGAAGGTGAGACTAGACAATGAGAAAGAGGGCTT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGACTACAACACCACTTaGTCGCTGACGTCGCCGTTT +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKDYNTT*SLTSPF
Trigger: AAACGGCGACGTCAGCGACAAAGTGGTGTTGTAGTC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATACTGCCTGCTGGCTCTaGGGTTTTCATCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDTACWL*GFHQLT
Trigger: AGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGT...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCTGTTATTAGCCCTCTAGGAATGGAGGCATCATCTCTAACCACAGCTCAGCAGAGAAGGGCGTATCTTTaGTCAAAGTGGAGTAAACTT +
Preference number: 5 (lower is better)
Translates to: AVISPLGMEASSLTTAQQRRAYL*SKWSKL
Trigger: AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCT...CTGCTGAGCTGTGGTTAGAGATGATGCCTCCATTCCTAGAGGGCTAATAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTCATCGATCCCGACTaGCTGGAGACTTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFIDPD*LETSWL
Trigger: AAGCCAAGAAGTCTCCAGCAAGTCGGGATCGATGAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATTCCTGGTCTTCTCCTaGTGGAGCTTGGATGACCTG +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELFLVFS*WSLDDL
Trigger: CAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAACGAGGGGCTATCATCTaGTTTGGAGCTGTCAGACCA +
Preference number: 5 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQRGAII*FGAVRP
Trigger: TGGTCTGACAGCTCCAAACAAGATGATAGCCCCTCG...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGTGGAAGAGCTGGTATaGGAGGCAAAGGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQVEELV*EAKVAK
Trigger: CTTTGCCACCTTTGCCTCCAATACCAGCTCTTCCAC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGTCTCTTTTTATATGGTaGCTGAGGTGGTGTGATTGC +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILSLFIW*LRWCDC
Trigger: GCAATCACACCACCTCAGCAACCATATAAAAAGAGA...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTAGTTCTCCTGTGTCTTaGTCCTTGGCTTTATATACT +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSSSPVS*SLALYT
Trigger: AGTATATAAAGCCAAGGACAAAGACACAGGAGAACT...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGAGTTCTCCTGTGTCTTaGTCCTTGGCTTTATATACT +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISSSPVS*SLALYT
Trigger: AGTATATAAAGCCAAGGACAAAGACACAGGAGAACT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTGCACCTTTGTCCTTCTaGAAATCCAGTGCATCTTGT +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLAPLSF*KSSASC
Trigger: ACAAGATGCACTGGATTTCAAGAAGGACAAAGGTGC...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGCCAAAATCTGCTAGTTaGATTTGCCCACTGTTATTC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISPKSAS*ICPLLF
Trigger: GAATAACAGTGGGCAAATCAAACTAGCAGATTTTGG...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp CCTGCTTTATGTGCAGGGAGAAGGGCGTATCTTTTGTCAAAGTGGAGTAAACTTTCTGGAGGAGCCATTTaGCTGAGTTCGACATCTTTA +
Preference number: 5 (lower is better)
Translates to: PALCAGRRAYLLSKWSKLSGGAI*LSSTSL
Trigger: TAAAGATGTCGAACTCAGCAAAATGGCTCCTCCAGA...AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCTCCCTGCACATAAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGAGAAGGGCGTATCTTTaGTCAAAGTGGAGTAAACTT +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISRRAYL*SKWSKL
Trigger: AAGTTTACTCCACTTTGACAAAAGATACGCCCTTCT...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTTTCTAAATCAGTGTTaGGCCCTGGAGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDFLNQC*ALEARP
Trigger: TGGCCTTGCCTCCAGGGCCAAACACTGATTTAGAAA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGACGGTCAAACCAGTTTaGCCTCCCACTCATGAACAG +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKTVKPV*PPTHEQ
Trigger: CTGTTCATGAGTGGGAGGCAAAACTGGTTTGACCGT...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATTCTCCTTGTGGAGCTaGGATGACCTGGATTCCTTG +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELFSLWS*DDLDSL
Trigger: CAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATCCAATAATGTCAAACTaGTCCACACAGCGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDPIMSN*STQRFP
Trigger: GGGGAAACGCTGTGTGGACAAGTTTGACATTATTGG...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATGTTCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGGAAATCCAGTGCATCTaGTTTATCTGTGACAATTTC +
Preference number: 5 (lower is better)
Translates to: NVLAIAHPGGTGANIIISEIQCI*FICDNF
Trigger: GAAATTGTCACAGATAAACAAGATGCACTGGATTTC...CGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TCTGGCTATAGCCCATCCAGGGGGAACTGGTGCCAACATCATTATTTCGTAAGTGAAATCCAGTGCATCTaGTTTATCTGTGACAATTTC +
Preference number: 5 (lower is better)
Translates to: SGYSPSRGNWCQHHYFVSEIQCI*FICDNF
Trigger: GAAATTGTCACAGATAAACAAGATGCACTGGATTTC...ACTTACGAAATAATGATGTTGGCACCAGTTCCCCCTGGATGGGCTATAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp GCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAAGAGCAGCTCAAATTTTGCCAAAATCTGCTAGTTaGATTTGCCCACTGTTATTC +
Preference number: 5 (lower is better)
Translates to: ARPLCFPYSKSQRAAQILPKSAS*ICPLLF
Trigger: GAATAACAGTGGGCAAATCAAACTAGCAGATTTTGG...CAAAATTTGAGCTGCTCTTTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATGTAAAGTCTACCTACTaGCCCAAGAATGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDVKSTY*PKNATF
Trigger: GAACGTGGCATTCTTGGGCAAGTAGGTAGACTTTAC...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGGTGCCAACATCATTATTTCGTAAGTCGCCTGCTAGTAGCAAGTGAGCAAGGAAATTATCCCAGGTTCTaGGGCATCTCAACGATTTTT +
Preference number: 5 (lower is better)
Translates to: WCQHHYFVSRLLVASEQGNYPRF*GISTIF
Trigger: AAAAATCGTTGAGATGCCCAAGAACCTGGGATAATT...TCCTTGCTCACTTGCTACTAGCAGGCGACTTACGAAATAATGATGTTGGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAATGTCTTTGGAGTGTTaGGACTTATGCCGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELMSLEC*DLCRLC
Trigger: GCACAAGCGGCATAAGTCCAAACACTCCAAAGACAT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAATACAGGTGAACCCTaGGACTCCTTTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELNTGEP*DSFPSI
Trigger: GATGGATGGAAAGGAGTCCAAGGGTTCACCTGTATT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATATTCTAAAACACAAAGGCCCATGTCTGAGGACTAAGAAGTCAACAGACAGAGCAAAGGAGGCAACGTaGAAGTTTTCAGGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: NILKHKGPCLRTKKSTDRAKEAT*KFSGVE
Trigger: TTCCACACCTGAAAACTTCAACGTTGCCTCCTTTGC...TCTGTCTGTTGACTTCTTAGTCCTCAGACATGGGCCTTTGTGTTTTAGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS-3UTR CAA 90 bp GTGAGCAAGGAATACAACGGACAGCTTTGCAGTAGCCAAATGCAGATGATTACCAAGGAAGAGTTTCTTTaGGACTATCCATGTCATCAT +
Preference number: 5 (lower is better)
Translates to: VSKEYNGQLCSSQMQMITKEEFL*DYPCHH
Trigger: ATGATGACATGGATAGTCCAAAAGAAACTCTTCCTT...GGTAATCATCTGCATTTGGCTACTGCAAAGCTGTCCGTTGTATTCCTTGCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATCTTTTCGAGAAGTTTaGGATGGAGGTGGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELSFREV*DGGGSS
Trigger: CGAAGAGCCACCTCCATCCAAAACTTCTCGAAAAGA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAACTTTGATTCAGCTGTaGTGTGATGTCAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELTLIQL*CDVSKA
Trigger: GGCCTTGCTGACATCACACAACAGCTGAATCAAAGT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAACTTTGATTCAGCTGTaGTGTGATGTCAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQTLIQL*CDVSKA
Trigger: GGCCTTGCTGACATCACACAACAGCTGAATCAAAGT...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS TCA 90 bp TCTCCAAATCCAGGAACACAAAGCAATACCAGGACAGGATTCAAATaGTTTCCCCTCTCTGGGTCTTGTTTTTCACATCTTATATTCTGG +
Preference number: 5 (lower is better)
Translates to: SPNPGTQSNTRTGFK*FPLSGSCFSHLIFW
Trigger: CCAGAATATAAGATGTGAAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTTGTGTTCCTGGATTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS GCA 90 bp AATCTCCTCTTTCAGTGCTATGGGTTTAGAGTCTCTTGTTCCCTGTaGTTTCAAATCTTTAACAAGATGCTTCTCGGAGTTCTCATCCAA +
Preference number: 5 (lower is better)
Translates to: NLLFQCYGFRVSCSL*FQIFNKMLLGVLIQ
Trigger: TTGGATGAGAACTCCGAGAAGCATCTTGTTAAAGATTTGAAAGCACAGGGAACAAGAGACTCTAAACCCATAGCACTGAAAGAGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS-3UTR CAA 90 bp AAACATTTATTCAAATCAGCCAGGCCACTCTGTTTCCCTTATAGCAAAAGCCAAGCACCTTTGTCCTTCTaGAAATCCAGTGCATCTTGT +
Preference number: 5 (lower is better)
Translates to: KHLFKSARPLCFPYSKSQAPLSF*KSSASC
Trigger: ACAAGATGCACTGGATTTCAAGAAGGACAAAGGTGC...TTGGCTTTTGCTATAAGGGAAACAGAGTGGCCTGGCTGATTTGAATAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTATCTGGAGGAGCCATTTaGCTGAGTTCGACATCTTTA +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELSGGAI*LSSTSL
Trigger: TAAAGATGTCGAACTCAGCAAAATGGCTCCTCCAGA...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AAAGCAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTGGGTCTTGTTTTTTCTTGTTTTTCACATTaGAGCTGCTGCATGTGCTGT +
Preference number: 5 (lower is better)
Translates to: KAIPGQDSNDFPSLGLVFSCFSH*SCCMCC
Trigger: ACAGCACATGCAGCAGCTCAAATGTGAAAAACAAGA...AAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTGCTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGTGTTTCATGAACGACTaGATATGGTCCTCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKCFMND*IWSSEK
Trigger: CTTTTCTGAGGACCATATCAAGTCGTTCATGAAACA...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp ACCTCGCTCTGGCAAATGATTTCATTAAAGATTCAGAGAACTGGATGGAAGGATTGTTTCATGAACGACTaGATATGGTCCTCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: TSLWQMISLKIQRTGWKDCFMND*IWSSEK
Trigger: CTTTTCTGAGGACCATATCAAGTCGTTCATGAAACA...ATCCTTCCATCCAGTTCTCTGAATCTTTAATGAAATCATTTGCCAGAGCGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS GCA 90 bp GTGGTCACATTTCTAGGACATAATCTTGCTCTACAACAGAGACCTTaGATGGACTTGGCTAACACATTTTACAGAATGTTTGATGACATA +
Preference number: 5 (lower is better)
Translates to: VVTFLGHNLALQQRP*MDLANTFYRMFDDI
Trigger: TATGTCATCAAACATTCTGTAAAATGTGTTAGCCAAGTCCATGCAAGGTCTCTGTTGTAGAGCAAGATTATGTCCTAGAAATGTGACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584336.1
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTACAGTTCCAGATTGGCTaGAAAAATAGGCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELQFQIG*KNRLLC
Trigger: ACAAAGAAGCCTATTTTTCAAGCCAATCTGGAACTG...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp AATACTGAAACTGTTCTTTCTCTCTTCCGATCAGTAAGTGCAGGCAATGAACTAAATTATCCCAGGTTCTaGGGCATCTCAACGATTTTT +
Preference number: 5 (lower is better)
Translates to: NTETVLSLFRSVSAGNELNYPRF*GISTIF
Trigger: AAAAATCGTTGAGATGCCCAAGAACCTGGGATAATT...TAGTTCATTGCCTGCACTTACTGATCGGAAGAGAGAAAGAACAGTTTCAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS-3UTR CAA 90 bp TGCAGTAGCCAAATGCAGATGATTACCTCGCTCTGGCAAATGATTTCATTAAAGGAGGGAAAAACATTATaGATGACTGCTGATAACCAA +
Preference number: 5 (lower is better)
Translates to: CSSQMQMITSLWQMISLKEGKTL*MTADNQ
Trigger: TTGGTTATCAGCAGTCATCAATAATGTTTTTCCCTC...CTTTAATGAAATCATTTGCCAGAGCGAGGTAATCATCTGCATTTGGCTACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS CCA 72 bp GCCGACGGCCCGGGGCTGTGGAGCCGACTCCAGCTCTaGGGCCCTGCGAGGACTACGCGGGCCCTTCCCCTA +
Preference number: 6 (lower is better)
Translates to: ADGPGLWSRLQL*GPARTTRALPL
Trigger: TAGGGGAAGGGCCCGCGTAGTCCTCGCAGGGCCCCAGAGCTGGAGTCGGCTCCACAGCCCCGGGCCGTCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp AGTCCTCAGGCCCGGGCGCCGGGGAGGTCCAGGAAGTaGGAAGCCGACGGCCCGGGGCTGTGGAGCCGACTC +
Preference number: 6 (lower is better)
Translates to: SPQARAPGRSRK*EADGPGLWSRL
Trigger: GAGTCGGCTCCACAGCCCCGGGCCGTCGGCTTCTCACTTCCTGGACCTCCCCGGCGCCCGGGCCTGAGGACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp GGTAGCCCGGTTCAGGACGGCTTCCTGTCGCCGGGGTaGCGCGGCCTAGGTGCCTCACGCCCCCTTTGTCCC +
Preference number: 6 (lower is better)
Translates to: GSPVQDGFLSPG*RGLGASRPLCP
Trigger: GGGACAAAGGGGGCGTGAGGCACCTAGGCCGCGGCACCCCGGCGACAGGAAGCCGTCCTGAACCGGGCTACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp GGACGGCTTCCTGTCGCCGGGGTGCCGCGGCCTAGGTaGCTCACGCCCCCTTTGTCCCTCGCTCCTGAGGTA +
Preference number: 6 (lower is better)
Translates to: GRLPVAGVPRPR*LTPPLSLAPEV
Trigger: TACCTCAGGAGCGAGGGACAAAGGGGGCGTGAGGCACCTAGGCCGCGGCACCCCGGCGACAGGAAGCCGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp TCTGTCGCCTACTGTAGGGGCTCGGTGACCGGGTGCTaGACTGGTAGGCCGAAGGCTCCTTGTAAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: SVAYCRGSVTGC*TGRPKAPCKGD
Trigger: GTCCCCCTTACAAGGAGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGTAGGCGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp TGCAGCAAGGCGGCTGTCACGGCTGGGTTCAACTCCTaGGGGGCGCTGGAAAGATCGCCTTCAACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: CSKAAVTAGFNS*GALERSPSTRG
Trigger: CCCTCTGGTTGAAGGCGATCTTTCCAGCGCCCCCCAGGAGTTGAACCCAGCCGTGACAGCCGCCTTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp ATTCCCACCGTTGCTCCTACCTGCTGCCTCCTCCTGTaGCATTGTGGGAGTTCTTCGGGGCCCCTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: IPTVAPTCCLLL*HCGSSSGPLWP
Trigger: GGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGGTAGGAGCAACGGTGGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS CCA 72 bp GGGAAGACTATAACGAGGAGCAGGCTGGGACCCAGGTaGCAGGGCATGGCGATGCTCCCAAGCCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: GKTITRSRLGPR*QGMAMLPSLAV
Trigger: CACAGCCAGGCTTGGGAGCATCGCCATGCCCTGCCACCTGGGTCCCAGCCTGCTCCTCGTTATAGTCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 72 bp CACCGTTGCTCCTACCTGCTGCCTCCTCCTGTGGCATaGTGGGAGTTCTTCGGGGCCCCTGTGGCCCACTGT +
Preference number: 6 (lower is better)
Translates to: HRCSYLLPPPVA*WEFFGAPVAHC
Trigger: ACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGGTAGGAGCAACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS GCA 72 bp ATCTCTGTCGCCTACTGTAGGGGCTCGGTGACCGGGTaGTGGACTGGTAGGCCGAAGGCTCCTTGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: ISVAYCRGSVTG*WTGRPKAPCKG
Trigger: CCCCTTACAAGGAGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGTAGGCGACAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp GACTCCGACTCAGAGACCGCTTGCTCAGGAAAGGGCTaGTGGACCGCCTTCGACCATAGGGACTGGGCGATC +
Preference number: 6 (lower is better)
Translates to: DSDSETACSGKG*WTAFDHRDWAI
Trigger: GATCGCCCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp GGTGGCAGGGCATGGCGATGCTCCCAAGCCTGGCTGTaGCTACCCCTGCCCACAGGAAAGCTGAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: GGRAWRCSQAWL*LPLPTGKLREE
Trigger: TTCTTCTCTCAGCTTTCCTGTGGGCAGGGGTAGGCACAGCCAGGCTTGGGAGCATCGCCATGCCCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CCA 72 bp GAGGAGGACATGCTGCTGCCTCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCTGTGGCCCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: EEDMLLPPPVAL*EFFGAPVAHCS
Trigger: AGAACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGCATGTCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS CCA 72 bp CGTTGCTCCTACCTGCTGCCTCCTCCTGTGGCATTGTaGGAGTTCTTCGGGGCCCCTGTGGCCCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: RCSYLLPPPVAL*EFFGAPVAHCS
Trigger: AGAACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGGTAGGAGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559663.1
CDS CAA 72 bp TGTGAGGAGGACATGCTGCTGCCTCCTCCTGTGGCATaGTGGGAGTTCTTCGGGGCCCCTGTGGCCCACTGT +
Preference number: 6 (lower is better)
Translates to: CEEDMLLPPPVA*WEFFGAPVAHC
Trigger: ACAGTGGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGCATGTCCTCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS TCA 72 bp GTGACGCTCTCTGCTGTTAGAGCTGCCGCCTCCCGATaGCGGCTGCAAAGTTCCAGAAGCTCCTCCACTCCC +
Preference number: 6 (lower is better)
Translates to: VTLSAVRAAASR*RLQSSRSSSTP
Trigger: GGGAGTGGAGGAGCTTCTGGAACTTTGCAGCCGTCATCGGGAGGCGGCAGCTCTAACAGCAGAGAGCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp ACTGACAGATCTCTGTCGCCTACTGTAGGGGCTCGGTaGCCGGGTGCTGGACTGGTAGGCCGAAGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: TDRSLSPTVGAR*PGAGLVGRRLL
Trigger: AAGGAGCCTTCGGCCTACCAGTCCAGCACCCGGTCACCGAGCCCCTACAGTAGGCGACAGAGATCTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TCCTACTGGGGAGTGGACTCCGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGGACCGCCTTCGACCAT +
Preference number: 6 (lower is better)
Translates to: SYWGVDSDSETA*SGKGCWTAFDH
Trigger: ATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGTAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS GCA 72 bp GGTCGGGTGGAGTACTCCATTGGTCTCAAGGCCTGGTaGTCATGTGGCAGGTGGCCAGGAGGCTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: GRVEYSIGLKAW*SCGRWPGGSAS
Trigger: TGAAGCAGAGCCTCCTGGCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS GCA 72 bp CCCCTGGAAACTGCACTGACCCTGTGCCCTGGTAACTaGTGGACTCCCCAAGGTGGCTCAGAGAGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: PLETALTLCPGN*WTPQGGSESLR
Trigger: TCTCAGGCTCTCTGAGCCACCTTGGGGAGTCCAGCAGTTACCAGGGCACAGGGTCAGTGCAGTTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp GGAAAGGGCTGCTGGACCGCCTTCGACCATAGGGACTaGGCGATCGCCCGCTGTAAGAGCCACTTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: GKGCWTAFDHRD*AIARCKSHFFR
Trigger: ACGAAAGAAGTGGCTCTTACAGCGGGCGATCGCCCAGTCCCTATGGTCGAAGGCGGTCCAGCAGCCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp AGTCCTGTTTGGACGGGGTCGGGTGGAGTACTCCATTaGTCTCAAGGCCTGGTGCTCATGTGGCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SPVWTGSGGVLH*SQGLVLMWQVA
Trigger: GGCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp AAGAATGTGAGGAGGACATGCTGCTGCCTCCTCCTGTaGCATTGTGGGAGTTCTTCGGGGCCCCTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: KNVRRTCCCLLL*HCGSSSGPLWP
Trigger: GGGCCACAGGGGCCCCGAAGAACTCCCACAATGCCACAGGAGGAGGCAGCAGCATGTCCTCCTCACATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447079.6
CDS CAA 72 bp TTCCTACTGGGGAGTGGACTCCGACTCAGAGACCGCTaGCTCAGGAAAGGGCTGCTGGACCGCCTTCGACCA +
Preference number: 6 (lower is better)
Translates to: FLLGSGLRLRDR*LRKGLLDRLRP
Trigger: TGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS CAA 72 bp GATTTCCTGGGGAGTGGACTCCGACTCAGAGACCGCTaGCTCAGGAAAGGGCTGCTGGACCGCCTTCGACCA +
Preference number: 6 (lower is better)
Translates to: DFLGSGLRLRDR*LRKGLLDRLRP
Trigger: TGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGGAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584632.5
CDS GCA 72 bp TCTCTGCTGTTAGAGCTGCCGCCTCCCGATGACGGCTaGAAAGTTCCAGAAGCTCCTCCACTCCCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SLLLELPPPDDG*KVPEAPPLPSF
Trigger: GAAGGACGGGAGTGGAGGAGCTTCTGGAACTTTGCAGCCGTCATCGGGAGGCGGCAGCTCTAACAGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp ATTTCCTGGGGAGTGGACTCCGACTCAGAGACCGCTTaGTCAGGAAAGGGCTGCTGGACCGCCTTCGACCAT +
Preference number: 6 (lower is better)
Translates to: ISWGVDSDSETA*SGKGCWTAFDH
Trigger: ATGGTCGAAGGCGGTCCAGCAGCCCTTTCCTGAGCAAGCGGTCTCTGAGTCGGAGTCCACTCCCCAGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584632.5
CDS CAA 72 bp AAGTCCTGTTTGGACGGGGTCGGGTGGAGTACTCCATaGGTCTCAAGGCCTGGTGCTCATGTGGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: KSCLDGVGWSTP*VSRPGAHVAGG
Trigger: GCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CAA 90 bp CACCTTGGCCTGGCTGCCTGGCAGGCAGTGAATAGGGTATCTCCCTaGATGAGCACTGACCGCTCTCCTCCTCCATACTTACGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: HLGLAAWQAVNRVSP*MSTDRSPPPYLRCP
Trigger: GGGACACCGTAAGTATGGAGGAGGAGAGCGGTCAGTGCTCATCAAGGGAGATACCCTATTCACTGCCTGCCAGGCAGCCAGGCCAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 90 bp TGTTTCCATAAGTCCTGTTTGGACGGGGTCGGGTGGAGTACTCCATaGGTCTCAAGGCCTGGTGCTCATGTGGCAGGTGGCCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: CFHKSCLDGVGWSTP*VSRPGAHVAGGQEA
Trigger: AGCCTCCTGGCCACCTGCCACATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS TCA 72 bp CTATTCTCCATGCCAGAACGCAAAGTGGCCAGTGATTaGTGGGCCTGGGTTCCCGGTAACCGCACCCAGTGG +
Preference number: 6 (lower is better)
Translates to: LFSMPERKVASD*WAWVPGNRTQW
Trigger: CCACTGGGTGCGGTTACCGGGAACCCAGGCCCATCAATCACTGGCCACTTTGCGTTCTGGCATGGAGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558240.1
ENST00000585161.1
CDS GCA 72 bp ACAGAATTGCTGCTTCCCTCAGCCTTCAGGAATGGTTaGCCGACCACCGGGTGTAACGCTAAGGGGACCCTG +
Preference number: 6 (lower is better)
Translates to: TELLLPSAFRNG*PTTGCNAKGTL
Trigger: CAGGGTCCCCTTAGCGTTACACCCGGTGGTCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp GGCCATAAGAAGCTCCCGAGGGGCTATCATCTTGTTTaGAGCTGTCAGACCACTTCCTGTGGGGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GHKKLPRGYHLV*SCQTTSCGGSW
Trigger: CCAGGAGCCCCCACAGGAAGTGGTCTGACAGCTCCAAACAAGATGATAGCCCCTCGGGAGCTTCTTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp CCTCCACCTCGCTATTCTCCATGCCAGAACGCAAAGTaGCCAGTGATTGATGGGCCTGGGTTCCCGGTAACC +
Preference number: 6 (lower is better)
Translates to: PPPRYSPCQNAK*PVIDGPGFPVT
Trigger: GGTTACCGGGAACCCAGGCCCATCAATCACTGGCCACTTTGCGTTCTGGCATGGAGAATAGCGAGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558240.1
ENST00000585161.1
CDS CCA 72 bp CAGTATAGTTCCAATCCGTTTGGAGGTCCTGGCAGTTaGGGGGAAATCCTGGCACCTCTCCCCAGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: QYSSNPFGGPGS*GEILAPLPSAS
Trigger: GGAGGCACTGGGGAGAGGTGCCAGGATTTCCCCCCAACTGCCAGGACCTCCAAACGGATTGGAACTATACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558240.1
ENST00000585161.1
CDS CCA 72 bp TCCTCTGCCAGGGTAGCATGTGCCAGCCTGGGAGGGTaGCACCATGCCCTAGTGTCTAATTTCTGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: SSARVACASLGG*HHALVSNFWRC
Trigger: ACACCTCCAGAAATTAGACACTAGGGCATGGTGCCACCCTCCCAGGCTGGCACATGCTACCCTGGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 90 bp GATGACGGCTGCAAAGTTCCAGAAGCTCCTCCACTCCCGTCCTTCTaGCCCCCATGTCTCTCTGAATTGGGCATTCCCTTTCCCCTGACC +
Preference number: 6 (lower is better)
Translates to: DDGCKVPEAPPLPSF*PPCLSELGIPFPLT
Trigger: GGTCAGGGGAAAGGGAATGCCCAATTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTGGAGGAGCTTCTGGAACTTTGCAGCCGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp ACTGTGCCCAGGGATGCTGCTTCGGGGGTCACCAACCCCATGTCTTaGGAGTGTTTGGACTTATGCCGCTTGTGCTTCGATACCAAGCGG +
Preference number: 6 (lower is better)
Translates to: TVPRDAASGVTNPMS*ECLDLCRLCFDTKR
Trigger: CCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp TTGGACTTATGCCGCTTGTGCTTCGATACCAAGCGGTaGCGCTCTCTGCTGTTAGAGCTGCCGCCTCCCGAT +
Preference number: 6 (lower is better)
Translates to: LDLCRLCFDTKR*RSLLLELPPPD
Trigger: ATCGGGAGGCGGCAGCTCTAACAGCAGAGAGCGTCACCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp GCTTTTAGTAAGTCCCGGGAACGCCTGTGCTGGTGGTaGCGATGTTTGTGCAGGCGGTCGCTCCGATCTGAT +
Preference number: 6 (lower is better)
Translates to: AFSKSRERLCWW*RCLCRRSLRSD
Trigger: ATCAGATCGGAGCGACCGCCTGCACAAACATCGTCACCACCAGCACAGGCGTTCCCGGGACTTACTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp TGGACTGGTAGGCCGAAGGCTCCTTGTAAGGGGGACTaGCCGACTGCCTTCTCGAGGTACTTCCAGGACTTT +
Preference number: 6 (lower is better)
Translates to: WTGRPKAPCKGD*PTAFSRYFQDF
Trigger: AAAGTCCTGGAAGTACCTCGAGAAGGCAGTCGGTCAGTCCCCCTTACAAGGAGCCTTCGGCCTACCAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp TTTCGTAGCTGGACGACCGTCTCCTGCTATAGGGACTaGCAGATCTCTGTCGCCTACTGTAGGGGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: FRSWTTVSCYRD*QISVAYCRGSV
Trigger: CACCGAGCCCCTACAGTAGGCGACAGAGATCTGTCAGTCCCTATAGCAGGAGACGGTCGTCCAGCTACGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp GAAGGAGCGAGGGAAGAAATGAGAGTTCCTCGGCAGTaGAGTTGCGAGACAACGGGGAGCTGCTCAAGTCTG +
Preference number: 6 (lower is better)
Translates to: EGAREEMRVPRQ*SCETTGSCSSL
Trigger: CAGACTTGAGCAGCTCCCCGTTGTCTCGCAACTCCACTGCCGAGGAACTCTCATTTCTTCCCTCGCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp CCAGACTTCAGCTCCCGTTCTTTCCTGGTCTTCTCCTTGTGGAGCTaGGATGACCTGGATTCCTTGCTGCTGCTTTTGGCTACCTGCGCC +
Preference number: 6 (lower is better)
Translates to: PDFSSRSFLVFSLWS*DDLDSLLLLLATCA
Trigger: GGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp TCTGGGTTGGAGTGGATGTTAAGCAGCTGTGCCATTTaGGGGATGCTCAGGTCGGTTTGGCTCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGLEWMLSSCAI*GMLRSVWLCSR
Trigger: CCTGCTGCAGAGCCAAACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTTAACATCCACTCCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS GCA 72 bp CTCCACCAAAGGTTTGATAACTGTGCCCAGGGATGCTaGTTCGGGGGTCACCAACCCCATGTCTTTGGAGTG +
Preference number: 6 (lower is better)
Translates to: LHQRFDNCAQGC*FGGHQPHVFGV
Trigger: CACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTTATCAAACCTTTGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp TGGTTGCTGTGGAAGAGCTGGTATTGGAGGCAAAGGTaGCAAAGGGGGTGTCTGAGGTGGAGGGGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: WLLWKSWYWRQR*QRGCLRWRGSS
Trigger: ACTACTACCCCTCCACCTCAGACACCCCCTTTGCCACCTTTGCCTCCAATACCAGCTCTTCCACAGCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp GCTTCGGGGGTCACCAACCCCATGTCTTTGGAGTGTTaGGACTTATGCCGCTTGTGCTTCGATACCAAGCGG +
Preference number: 6 (lower is better)
Translates to: ASGVTNPMSLEC*DLCRLCFDTKR
Trigger: CCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp GAGACTGAATTTGCCAGGCTCTGGGTGAGAGGTGACTaGTGGACATCACTGCATTCCTCAGAGGGCATTCCC +
Preference number: 6 (lower is better)
Translates to: ETEFARLWVRGD*WTSLHSSEGIP
Trigger: GGGAATGCCCTCTGAGGAATGCAGTGATGTCCATCAGTCACCTCTCACCCAGAGCCTGGCAAATTCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559663.1
ENST00000581963.1
CDS GCA 72 bp GCAAAGTTCCAGAAGCTCCTCCACTCCCGTCCTTCTTaGCCCCATGTCTCTCTGAATTGGGCATTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: AKFQKLLHSRPS*PHVSLNWAFPF
Trigger: GAAAGGGAATGCCCAATTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTGGAGGAGCTTCTGGAACTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp CCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTGCTaGTTTTGGCTACCTGCGCCTTCCCATAGTCATCAG +
Preference number: 6 (lower is better)
Translates to: PCGAWMTWIPCC*FWLPAPSHSHQ
Trigger: CTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp CTGCATCTCTGGGTTGGAGTGGATGTTAAGCAGCTGTaGCATTTGAGGGATGCTCAGGTCGGTTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LHLWVGVDVKQL*HLRDAQVGLAL
Trigger: CAGAGCCAAACCGACCTGAGCATCCCTCAAATGGCACAGCTGCTTAACATCCACTCCAACCCAGAGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
ENST00000584632.5
CDS CCA 72 bp CTTCGGGGGTCACCAACCCCATGTCTTTGGAGTGTTTaGACTTATGCCGCTTGTGCTTCGATACCAAGCGGT +
Preference number: 6 (lower is better)
Translates to: LRGSPTPCLWSV*TYAACASIPSG
Trigger: ACCGCTTGGTATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp GGGATGCTGCTTCGGGGGTCACCAACCCCATGTCTTTaGAGTGTTTGGACTTATGCCGCTTGTGCTTCGATA +
Preference number: 6 (lower is better)
Translates to: GMLLRGSPTPCL*SVWTYAACASI
Trigger: TATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp GGAGCTTGGATGACCTGGATTCCTTGCTGCTGCTTTTaGCTACCTGCGCCTTCCCATAGTCATCAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: GAWMTWIPCCCF*LPAPSHSHQSP
Trigger: AGGAGACTGATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp CTTTCCTGGTCTTCTCCTTGTGGAGCTTGGATGACCTaGATTCCTTGCTGCTGCTTTTGGCTACCTGCGCCT +
Preference number: 6 (lower is better)
Translates to: LSWSSPCGAWMT*IPCCCFWLPAP
Trigger: AGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp CTATCATCTTGTTTGGAGCTGTCAGACCACTTCCTGTaGGGGCTCCTGGATCTCCGTTTTGGGCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: LSSCLELSDHFL*GLLDLRFGLST
Trigger: AGTGGACAGCCCAAAACGGAGATCCAGGAGCCCCCACAGGAAGTGGTCTGACAGCTCCAAACAAGATGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp CAGTGTTTCCATAAGTCCTGTTTGGACGGGGTCGGGTaGAGTACTCCATTGGTCTCAAGGCCTGGTGCTCAT +
Preference number: 6 (lower is better)
Translates to: QCFHKSCLDGVG*STPLVSRPGAH
Trigger: ATGAGCACCAGGCCTTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp CCTCCATTCTTGGCATATCACTGCTCTTCCCCAAACTaGGAAGACTATAACGAGGAGCAGGCTGGGACCCAG +
Preference number: 6 (lower is better)
Translates to: PPFLAYHCSSPN*EDYNEEQAGTQ
Trigger: CTGGGTCCCAGCCTGCTCCTCGTTATAGTCTTCCCAGTTTGGGGAAGAGCAGTGATATGCCAAGAATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 72 bp AGGGATGCTGCTTCGGGGGTCACCAACCCCATGTCTTaGGAGTGTTTGGACTTATGCCGCTTGTGCTTCGAT +
Preference number: 6 (lower is better)
Translates to: RDAASGVTNPMS*ECLDLCRLCFD
Trigger: ATCGAAGCACAAGCGGCATAAGTCCAAACACTCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp ATCTTGGCCATAAGAAGCTCCCGAGGGGCTATCATCTaGTTTGGAGCTGTCAGACCACTTCCTGTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: ILAIRSSRGAII*FGAVRPLPVGA
Trigger: AGCCCCCACAGGAAGTGGTCTGACAGCTCCAAACAAGATGATAGCCCCTCGGGAGCTTCTTATGGCCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp CTACCTGCGCCTTCCCATAGTCATCAGTCTCCTCATTCGAACGCTTaGAACTTCCCGATATCCGGTCCTTCATCGATCCCGACTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPAPSHSHQSPHSNA*NFPISGPSSIPTCW
Trigger: CCAGCAAGTCGGGATCGATGAAGGACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGGAGACTGATGACTATGGGAAGGCGCAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp ATCCACGACGTTCGTCGTTCTCCCTTCGGTCTAGTTTaGAGGCCATGTCATCGGAGAAGGTGTCGGAATCAG +
Preference number: 6 (lower is better)
Translates to: IHDVRRSPFGLV*RPCHRRRCRNQ
Trigger: CTGATTCCGACACCTTCTCCGATGACATGGCCTTCAAACTAGACCGAAGGGAGAACGACGAACGTCGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp CCGTTCTTTCCTGGTCTTCTCCTTGTGGAGCTTGGATaGCCTGGATTCCTTGCTGCTGCTTTTGGCTACCTG +
Preference number: 6 (lower is better)
Translates to: PFFPGLLLVELG*PGFLAAAFGYL
Trigger: CAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp ATACTCCACCAAAGGTTTGATAACTGTGCCCAGGGATaGTGCTTCGGGGGTCACCAACCCCATGTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: ILHQRFDNCAQG*CFGGHQPHVFG
Trigger: TCCAAAGACATGGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTGCTaGTGCTTTTGGCTACCTGCGCCTTCCCATAGTCAT +
Preference number: 6 (lower is better)
Translates to: SPCGAWMTWIPC*CFWLPAPSHSH
Trigger: ATGACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TCTTCTCCTTGTGGAGCTTGGATGACCTGGATTCCTTaGTGCTGCTTTTGGCTACCTGCGCCTTCCCATAGT +
Preference number: 6 (lower is better)
Translates to: SSPCGAWMTWIP*CCFWLPAPSHS
Trigger: ACTATGGGAAGGCGCAGGTAGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp GACTTCAGCTCCCGTTCTTTCCTGGTCTTCTCCTTGTaGAGCTTGGATGACCTGGATTCCTTGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: DFSSRSFLVFSL*SLDDLDSLLLL
Trigger: AAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp GGTCTTTGTGCCCAGACTTCAGCTCCCGTTCTTTCCTaGTCTTCTCCTTGTGGAGCTTGGATGACCTGGATT +
Preference number: 6 (lower is better)
Translates to: GLCAQTSAPVLS*SSPCGAWMTWI
Trigger: AATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTCTGGGCACAAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp AGAGAGCCTGAGAAGGTCCTGTTCTTCACCAGGGTCTaGACCAAGGATTCTGTCAAGGCTGGACCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: REPEKVLFFTRV*TKDSVKAGPEF
Trigger: AAACTCTGGTCCAGCCTTGACAGAATCCTTGGTCCAGACCCTGGTGAAGAACAGGACCTTCTCAGGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp CAGGGGCCTAAGACTGTCCTGGCTTCAGTATACTTGTaGGGAAGGATGAAGACTGACAAGTTCTCCCCATCC +
Preference number: 6 (lower is better)
Translates to: QGPKTVLASVYL*GRMKTDKFSPS
Trigger: GGATGGGGAGAACTTGTCAGTCTTCATCCTTCCCCACAAGTATACTGAAGCCAGGACAGTCTTAGGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559545.5
CDS CAA 72 bp TGCAAAGTTCCAGAAGCTCCTCCACTCCCGTCCTTCTaGCCCCCATGTCTCTCTGAATTGGGCATTCCCTTT +
Preference number: 6 (lower is better)
Translates to: CKVPEAPPLPSF*PPCLSELGIPF
Trigger: AAAGGGAATGCCCAATTCAGAGAGACATGGGGGCAAGAAGGACGGGAGTGGAGGAGCTTCTGGAACTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp GATCCACGACGTTCGTCGTTCTCCCTTCGGTCTAGTTaGAAGGCCATGTCATCGGAGAAGGTGTCGGAATCA +
Preference number: 6 (lower is better)
Translates to: DPRRSSFSLRSS*KAMSSEKVSES
Trigger: TGATTCCGACACCTTCTCCGATGACATGGCCTTCAAACTAGACCGAAGGGAGAACGACGAACGTCGTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp AGCTCCCGTTCTTTCCTGGTCTTCTCCTTGTGGAGCTaGGATGACCTGGATTCCTTGCTGCTGCTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: SSRSFLVFSLWS*DDLDSLLLLLA
Trigger: AGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp CTGTTTCAGGCCCATCAGTGTTTCCATAAGTCCTGTTaGGACGGGGTCGGGTGGAGTACTCCATTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LFQAHQCFHKSC*DGVGWSTPLVS
Trigger: TGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACACTGATGGGCCTGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CAA 90 bp AAGGTGTCGGAATCAGAGCTGATATCATCATACTCCACCAAAGGTTaGATAACTGTGCCCAGGGATGCTGCTTCGGGGGTCACCAACCCC +
Preference number: 6 (lower is better)
Translates to: KVSESELISSYSTKG*ITVPRDAASGVTNP
Trigger: GGGGTTGGTGACCCCCGAAGCAGCATCCCTGGGCACAGTTATCAAACCTTTGGTGGAGTATGATGATATCAGCTCTGATTCCGACACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp CTCCGATCTGATCCACGACGTTCGTCGTTCTCCCTTCGGTCTAGTTaGAAGGCCATGTCATCGGAGAAGGTGTCGGAATCAGAGCTGATA +
Preference number: 6 (lower is better)
Translates to: LRSDPRRSSFSLRSS*KAMSSEKVSESELI
Trigger: TATCAGCTCTGATTCCGACACCTTCTCCGATGACATGGCCTTCAAACTAGACCGAAGGGAGAACGACGAACGTCGTGGATCAGATCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp TCTTTGTGCCCAGACTTCAGCTCCCGTTCTTTCCTGGTCTTCTCCTaGTGGAGCTTGGATGACCTGGATTCCTTGCTGCTGCTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: SLCPDFSSRSFLVFS*WSLDDLDSLLLLLA
Trigger: AGCCAAAAGCAGCAGCAAGGAATCCAGGTCATCCAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGAAGTCTGGGCACAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp AAGGTCATAATCTTGGCCATAAGAAGCTCCCGAGGGGCTATCATCTaGTTTGGAGCTGTCAGACCACTTCCTGTGGGGGCTCCTGGATCT +
Preference number: 6 (lower is better)
Translates to: KVIILAIRSSRGAII*FGAVRPLPVGAPGS
Trigger: AGATCCAGGAGCCCCCACAGGAAGTGGTCTGACAGCTCCAAACAAGATGATAGCCCCTCGGGAGCTTCTTATGGCCAAGATTATGACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp GCCCACTGTTCTTGTCACTGTTGTTTTCCTCCAGACTaGCTGCTGGCTCTTGGGTTTTCATCAGCTGACTCA +
Preference number: 6 (lower is better)
Translates to: AHCSCHCCFPPD*LLALGFSSADS
Trigger: TGAGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGAGGAAAACAACAGTGACAAGAACAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS GCA 72 bp TGGGAGAGTCTGAGGCCTCCATTCTTGGCATATCACTaGTCTTCCCCAAACTGGGAAGACTATAACGAGGAG +
Preference number: 6 (lower is better)
Translates to: WESLRPPFLAYH*SSPNWEDYNEE
Trigger: CTCCTCGTTATAGTCTTCCCAGTTTGGGGAAGAGCAGTGATATGCCAAGAATGGAGGCCTCAGACTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CCA 72 bp TGTTTCAGGCCCATCAGTGTTTCCATAAGTCCTGTTTaGACGGGGTCGGGTGGAGTACTCCATTGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: CFRPISVSISPV*TGSGGVLHWSQ
Trigger: TTGAGACCAATGGAGTACTCCACCCGACCCCGTCCAAACAGGACTTATGGAAACACTGATGGGCCTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp CTTCACCAGGGTCTGGACCAAGGATTCTGTCAAGGCTaGACCAGAGTTTCGTTCATCAGTGTCAATGGCACT +
Preference number: 6 (lower is better)
Translates to: LHQGLDQGFCQG*TRVSFISVNGT
Trigger: AGTGCCATTGACACTGATGAACGAAACTCTGGTCCAGCCTTGACAGAATCCTTGGTCCAGACCCTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CAA 72 bp CCTTCCCATAGTCATCAGTCTCCTCATTCGAACGCTTaGAACTTCCCGATATCCGGTCCTTCATCGATCCCG +
Preference number: 6 (lower is better)
Translates to: PSHSHQSPHSNA*NFPISGPSSIP
Trigger: CGGGATCGATGAAGGACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGGAGACTGATGACTATGGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp TTTGGATGGAGGTGGCTCTTCGACTACAACACCACTTaGTCGCTGACGTCGCCGTTTCTTACTCCACAACTC +
Preference number: 6 (lower is better)
Translates to: FGWRWLFDYNTT*SLTSPFLTPQL
Trigger: GAGTTGTGGAGTAAGAAACGGCGACGTCAGCGACAAAGTGGTGTTGTAGTCGAAGAGCCACCTCCATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp TCGAGAAGTTTTGGATGGAGGTGGCTCTTCGACTACAACACCACTTaGTCGCTGACGTCGCCGTTTCTTACTCCACAACTCATGGCAATC +
Preference number: 6 (lower is better)
Translates to: SRSFGWRWLFDYNTT*SLTSPFLTPQLMAI
Trigger: GATTGCCATGAGTTGTGGAGTAAGAAACGGCGACGTCAGCGACAAAGTGGTGTTGTAGTCGAAGAGCCACCTCCATCCAAAACTTCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp CTTCCCATAGTCATCAGTCTCCTCATTCGAACGCTTTaGACTTCCCGATATCCGGTCCTTCATCGATCCCGA +
Preference number: 6 (lower is better)
Translates to: LPIVISLLIRTL*TSRYPVLHRSR
Trigger: TCGGGATCGATGAAGGACCGGATATCGGGAAGTTCAAAGCGTTCGAATGAGGAGACTGATGACTATGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TTTGCAATTTGGTCTCTGCATGTACCACAGAATTGCTaGTTCCCTCAGCCTTCAGGAATGGTTGCCCGACCA +
Preference number: 6 (lower is better)
Translates to: FAIWSLHVPQNC*FPQPSGMVARP
Trigger: TGGTCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATGCAGAGACCAAATTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CCA 72 bp CTTTTTATATGGTTGCTGAGGTGGTGTGATTGCCTTTaGTTCTGGAGAGTCTGGGGGAGACAGATCTCCACC +
Preference number: 6 (lower is better)
Translates to: LFIWLLRWCDCL*FWRVWGRQIST
Trigger: GGTGGAGATCTGTCTCCCCCAGACTCTCCAGAACCAAAGGCAATCACACCACCTCAGCAACCATATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp GGACATCACTGCATTCCTCAGAGGGCATTCCCACCGTaGCTCCTACCTGTAAAGGAAAATGGCAGGTTACAT +
Preference number: 6 (lower is better)
Translates to: GHHCIPQRAFPP*LLPVKENGRLH
Trigger: ATGTAACCTGCCATTTTCCTTTACAGGTAGGAGCAACGGTGGGAATGCCCTCTGAGGAATGCAGTGATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581963.1
CDS CAA 90 bp GACTCAAGAGAACTGCCAATATATTCTGCATGTCAGCTGGTGTGCTaGAAGCTTCAAGGGTCGTCTGTTCTGCTGAAGGCAGGATCACTG +
Preference number: 6 (lower is better)
Translates to: DSRELPIYSACQLVC*KLQGSSVLLKAGSL
Trigger: CAGTGATCCTGCCTTCAGCAGAACAGACGACCCTTGAAGCTTCAAGCACACCAGCTGACATGCAGAATATATTGGCAGTTCTCTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS TCA 72 bp TGGGCTGCTGTTCTTCACAGGCTCAGTACTTGTCCCTaGGGTAGTTTCTTTTCGAGAAGTTTTGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: WAAVLHRLSTCP*GSFFSRSFGWR
Trigger: CCTCCATCCAAAACTTCTCGAAAAGAAACTACCTCAGGGACAAGTACTGAGCCTGTGAAGAACAGCAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp CTGGACCAGAGTTTCGTTCATCAGTGTCAATGGCACTaGACCCTGTTTCAGGCCCATCAGTGTTTCCATAAG +
Preference number: 6 (lower is better)
Translates to: LDQSFVHQCQWH*TLFQAHQCFHK
Trigger: CTTATGGAAACACTGATGGGCCTGAAACAGGGTTCAGTGCCATTGACACTGATGAACGAAACTCTGGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS GCA 72 bp AGTTTTGCAATTTGGTCTCTGCATGTACCACAGAATTaGTGCTTCCCTCAGCCTTCAGGAATGGTTGCCCGA +
Preference number: 6 (lower is better)
Translates to: SFAIWSLHVPQN*CFPQPSGMVAR
Trigger: TCGGGCAACCATTCCTGAAGGCTGAGGGAAGCAGCAATTCTGTGGTACATGCAGAGACCAAATTGCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584336.1
CDS CAA 72 bp GAACTGCCAATATATTCTGCATGTCAGCTGGTGTGCTaGAAGCTTCAAGGGTCGTCTGTTCTGCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: ELPIYSACQLVC*KLQGSSVLLKA
Trigger: TGCCTTCAGCAGAACAGACGACCCTTGAAGCTTCAAGCACACCAGCTGACATGCAGAATATATTGGCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS CAA 90 bp CCCAGGAGCAAGAAAACAGCCTCACCTTATATTCTGGCTGTGATTTaGGGCTCCAGACCTGAGTCAACCAGTATAGTTCCAATCCGTTTG +
Preference number: 6 (lower is better)
Translates to: PRSKKTASPYILAVI*GSRPESTSIVPIRL
Trigger: CAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGGTGAGGCTGTTTTCTTGCTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS TCA 72 bp TCCAGACTGCCTGCTGGCTCTTGGGTTTTCATCAGCTaGCTCAAGAGAACTGCCAATATATTCTGCATGTCA +
Preference number: 6 (lower is better)
Translates to: SRLPAGSWVFIS*LKRTANIFCMS
Trigger: TGACATGCAGAATATATTGGCAGTTCTCTTGAGTCAGCTGATGAAAACCCAAGAGCCAGCAGGCAGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS GCA 72 bp AGAGAACTGCCAATATATTCTGCATGTCAGCTGGTGTaGTTGAAGCTTCAAGGGTCGTCTGTTCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RELPIYSACQLV*LKLQGSSVLLK
Trigger: CTTCAGCAGAACAGACGACCCTTGAAGCTTCAAGCACACCAGCTGACATGCAGAATATATTGGCAGTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000559663.1
CDS TCA 72 bp ACCTTATATTCTGGCTGTGATTTTGGGCTCCAGACCTaGGTCAACCAGTATAGTTCCAATCCGTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: TLYSGCDFGLQT*VNQYSSNPFGG
Trigger: ACCTCCAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CCA 72 bp AAGATGAATGTCTTGAATATGCAGGACTTCTACTTCTaGACTTCATGGATTTCCTGGGGAGTGGACTCCGAC +
Preference number: 6 (lower is better)
Translates to: KMNVLNMQDFYF*TSWISWGVDSD
Trigger: GTCGGAGTCCACTCCCCAGGAAATCCATGAAGTCCAGAAGTAGAAGTCCTGCATATTCAAGACATTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584632.5
CDS CAA 72 bp AGTTTTCAGGTGTGGAATAGCAGCTGTTACAGATACTaGAGTCTTCACAGAAACCTGTACAGGGGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SFQVWNSSCYRY*SLHRNLYRGLR
Trigger: TCTCAGCCCCCTGTACAGGTTTCTGTGAAGACTCAAGTATCTGTAACAGCTGCTATTCCACACCTGAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000581593.1
ENST00000584632.5
CDS CAA 72 bp GTACTTGTCCCTGAGGTAGTTTCTTTTCGAGAAGTTTaGGATGGAGGTGGCTCTTCGACTACAACACCACTT +
Preference number: 6 (lower is better)
Translates to: VLVPEVVSFREV*DGGGSSTTTPL
Trigger: AAGTGGTGTTGTAGTCGAAGAGCCACCTCCATCCAAAACTTCTCGAAAAGAAACTACCTCAGGGACAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp CTTGTCCACACAGCGTTTCCCCCAGTCGCTTTCTGTTaGTCTTCTTTCTCCATAACGAGGACAACAAATTCT +
Preference number: 6 (lower is better)
Translates to: LVHTAFPPVAFC*SSFSITRTTNS
Trigger: AGAATTTGTTGTCCTCGTTATGGAGAAAGAAGACAAACAGAAAGCGACTGGGGGAAACGCTGTGTGGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581593.1
CDS CAA 72 bp AAGAACATCTTTGGTCTTGCACCCAGGAAGCATCCATaGGTAGGTAACAGTGACGGTGATGTTAGCACTCTT +
Preference number: 6 (lower is better)
Translates to: KNIFGLAPRKHP*VGNSDGDVSTL
Trigger: AAGAGTGCTAACATCACCGTCACTGTTACCTACCAATGGATGCTTCCTGGGTGCAAGACCAAAGATGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581963.1
CDS CAA 90 bp CCTCTCTGGGTCTTGTTTTTCACATCTTATATTCTGGCTGTGATTTaGGGCTCCAGACCTGAGTCAACCAGTATAGTTCCAATCCGTTTG +
Preference number: 6 (lower is better)
Translates to: PLWVLFFTSYILAVI*GSRPESTSIVPIRL
Trigger: CAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGATGTGAAAAACAAGACCCAGAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS TCA 72 bp CTTGTAGGAGTCATAATTGCTCGAGGTATGAGATCGTaGGGGACTAAGGTCATAATCTTGGCCATAAGAAGC +
Preference number: 6 (lower is better)
Translates to: LVGVIIARGMRS*GTKVIILAIRS
Trigger: GCTTCTTATGGCCAAGATTATGACCTTAGTCCCTCACGATCTCATACCTCGAGCAATTATGACTCCTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS TCA 72 bp ATCTTATATTCTGGCTGTGATTTTGGGCTCCAGACCTaGGTCAACCAGTATAGTTCCAATCCGTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: ILYSGCDFGLQT*VNQYSSNPFGG
Trigger: ACCTCCAAACGGATTGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS GCA 72 bp TTTTATGTCAAAACATACAGAAATACCTCTGAACCCTaGCCTTCTCCTCCGTCTCTCCATAGTCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: FYVKTYRNTSEP*PSPPSLHSLWF
Trigger: GAACCAGAGACTATGGAGAGACGGAGGAGAAGGGCAGGGTTCAGAGGTATTTCTGTATGTTTTGACATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CCA 72 bp AAGATGAATGTCTTGAATATGCAGGACTTCTACTTCTaGACTTCATGGATTTCCTACTGGGGAGTGGACTCC +
Preference number: 6 (lower is better)
Translates to: KMNVLNMQDFYF*TSWISYWGVDS
Trigger: GGAGTCCACTCCCCAGTAGGAAATCCATGAAGTCCAGAAGTAGAAGTCCTGCATATTCAAGACATTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS CAA 72 bp CTTGTCCACACAGCGTTTCCCCCAGTCGCTTTCTGTTaGTCTTCTTTCTCCATAACGAGGACAACAAATTTT +
Preference number: 6 (lower is better)
Translates to: LVHTAFPPVAFC*SSFSITRTTNF
Trigger: AAAATTTGTTGTCCTCGTTATGGAGAAAGAAGACAAACAGAAAGCGACTGGGGGAAACGCTGTGTGGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 72 bp AAGAAAACAGCCTCACCTTATATTCTGGCTGTGATTTaGGGCTCCAGACCTGAGTCAACCAGTATAGTTCCA +
Preference number: 6 (lower is better)
Translates to: KKTASPYILAVI*GSRPESTSIVP
Trigger: TGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGGTGAGGCTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 90 bp AATGTCAAACTTGTCCACACAGCGTTTCCCCCAGTCGCTTTCTGTTaGTCTTCTTTCTCCATAACGAGGACAACAAATTCTATCCATGTC +
Preference number: 6 (lower is better)
Translates to: NVKLVHTAFPPVAFC*SSFSITRTTNSIHV
Trigger: GACATGGATAGAATTTGTTGTCCTCGTTATGGAGAAAGAAGACAAACAGAAAGCGACTGGGGGAAACGCTGTGTGGACAAGTTTGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581593.1
CDS TCA 72 bp GAATTAAGTGGAAGCCTGACAGGTGAGATACTGGAATaGCGACTGCGTGAACTGGATCTCTTCTTTTTACTA +
Preference number: 6 (lower is better)
Translates to: ELSGSLTGEILE*RLRELDLFFLL
Trigger: TAGTAAAAAGAAGAGATCCAGTTCACGCAGTCGTCATTCCAGTATCTCACCTGTCAGGCTTCCACTTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp AATGTCAAACTTGTCCACACAGCGTTTCCCCCAGTCGCTTTCTGTTaGTCTTCTTTCTCCATAACGAGGACAACAAATTTTTGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: NVKLVHTAFPPVAFC*SSFSITRTTNFWSL
Trigger: AAGAGACCAAAAATTTGTTGTCCTCGTTATGGAGAAAGAAGACAAACAGAAAGCGACTGGGGGAAACGCTGTGTGGACAAGTTTGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TGTTTCATGAACGACTTGATATGGTCCTCAGAAAAGTaGACCAAACCAGATTCTAGCAGTCCCATTAAGTCA +
Preference number: 6 (lower is better)
Translates to: CFMNDLIWSSEK*TKPDSSSPIKS
Trigger: TGACTTAATGGGACTGCTAGAATCTGGTTTGGTGCACTTTTCTGAGGACCATATCAAGTCGTTCATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CCA 72 bp CAATACCAGGACAGGATTCAAATGATTTCCCCTCTCTaGGTCTTGTTTTTCACATCTTATATTCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QYQDRIQMISPL*VLFFTSYILAV
Trigger: CACAGCCAGAATATAAGATGTGAAAAACAAGACCCAGAGAGGGGAAATCATTTGAATCCTGTCCTGGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS CAA 72 bp GTCTTGTTTTTCACATCTTATATTCTGGCTGTGATTTaGGGCTCCAGACCTGAGTCAACCAGTATAGTTCCA +
Preference number: 6 (lower is better)
Translates to: VLFFTSYILAVI*GSRPESTSIVP
Trigger: TGGAACTATACTGGTTGACTCAGGTCTGGAGCCCAAAATCACAGCCAGAATATAAGATGTGAAAAACAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558240.1
CDS CAA 72 bp TCCCCTGTCCCTATTCAGATATCAGATTGTCTCATGTaGGTCCCTGAGGTCCCATTAATTAAAAATACATCC +
Preference number: 6 (lower is better)
Translates to: SPVPIQISDCLM*VPEVPLIKNTS
Trigger: GGATGTATTTTTAATTAATGGGACCTCAGGGACCAACATGAGACAATCTGATATCTGAATAGGGACAGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585161.1
CDS CAA 90 bp TGCGTGAACTGGATCTCTTCTTTTTACTATGAGAAGATGAATGTCTaGAATATGCAGGACTTCTACTTCTGGACTTCATGGATTTCCTGG +
Preference number: 6 (lower is better)
Translates to: CVNWISSFYYEKMNV*NMQDFYFWTSWISW
Trigger: CCAGGAAATCCATGAAGTCCAGAAGTAGAAGTCCTGCATATTCAAGACATTCATCTTCTCATAGTAAAAAGAAGAGATCCAGTTCACGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584632.5
CDS GCA 72 bp TTTCAGTGCTATGGGTTTAGAGTCTCTTGTTCCCTGTaGTTTCAAATCTTTAACAAGATGCTTCTCGGAGTT +
Preference number: 6 (lower is better)
Translates to: FQCYGFRVSCSL*FQIFNKMLLGV
Trigger: AACTCCGAGAAGCATCTTGTTAAAGATTTGAAAGCACAGGGAACAAGAGACTCTAAACCCATAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS CAA 90 bp TGCGTGAACTGGATCTCTTCTTTTTACTATGAGAAGATGAATGTCTaGAATATGCAGGACTTCTACTTCTGGACTTCATGGATTTCCTAC +
Preference number: 6 (lower is better)
Translates to: CVNWISSFYYEKMNV*NMQDFYFWTSWISY
Trigger: GTAGGAAATCCATGAAGTCCAGAAGTAGAAGTCCTGCATATTCAAGACATTCATCTTCTCATAGTAAAAAGAAGAGATCCAGTTCACGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430627.6
ENST00000447079.6
CDS CAA 90 bp TACAAGGTAAAAGGCACCTTTGTCCTTCTTGAAATCCAGTGCATCTaGTTTATCTGTGACAATTTCCTTCATGTTAACAACACTTCGGTG +
Preference number: 6 (lower is better)
Translates to: YKVKGTFVLLEIQCI*FICDNFLHVNNTSV
Trigger: CACCGAAGTGTTGTTAACATGAAGGAAATTGTCACAGATAAACAAGATGCACTGGATTTCAAGAAGGACAAAGGTGCCTTTTACCTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430627.6
ENST00000447079.6
ENST00000584632.5
CDS GCA 72 bp TTTCTAGGACATAATCTTGCTCTACAACAGAGACCTTaGATGGACTTGGCTAACACATTTTACAGAATGTTT +
Preference number: 6 (lower is better)
Translates to: FLGHNLALQQRP*MDLANTFYRMF
Trigger: AAACATTCTGTAAAATGTGTTAGCCAAGTCCATGCAAGGTCTCTGTTGTAGAGCAAGATTATGTCCTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584336.1