Pregenerated sensors for CDK11B (Homo sapiens)
Ensembl gene IDs: ENSG00000248333Ensembl transcript IDs: ENST00000341832.11, ENST00000611150.3, ENST00000615951.4, ENST00000626918.2, ENST00000629289.2, ENST00000629312.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCCTCCTCAGAGTTGCTaGCGGTCTCCTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHPPQSC*RSPPPP Trigger: AGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| 3UTR-3UTR GCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACATGCCTCCTCAGAGTTaGTGCCGGTCTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHMPPQS*CRSPPP Trigger: AGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCAT...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| 3UTR-3UTR GCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCTGATTCTTCACTGGTaGTCCCTTCCTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHLILHW*SLPPPP Trigger: AGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| 3UTR-3UTR CCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCCTCTGATTCTTCACTaGTGCTCCCTTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHPLILH*CSLPPP Trigger: AGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR GCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGACGCTCCGGCAGCCCTaGAGGGCCGGCAGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTETLRQP*RAGRYL Trigger: CAAGTACCTGCCGGCCCTGCAGGGCTGCCGGAGCGT...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR TCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCGAAGTCACCCACCTTaGGGATGCCGGCGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTERSHPP*GCRRGS Trigger: TGAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR GCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCCTCCTCAGAGTTGCTaGCGGTCTCCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEPPQSC*RSPPPP Trigger: AGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCCACCCTCTCCGCCCTaGGCAAGTCACGGAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEPPSPP*ASHGEN Trigger: GTTTTCTCCGTGACTTGCCCAGGGCGGAGAGGGTGG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR GCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCATCGTTCGGTGATGTaGAGACACTTCCCTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEHRSVM*RHFPAG Trigger: GCCCGCAGGGAAGTGTCTGCACATCACCGAACGATG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR GCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGATGCCTCCTCAGAGTTaGTGCCGGTCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEMPPQS*CRSPPP Trigger: AGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCAT...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGGGTCTTCACCTCCCCTaGCAGGAAGGGCTGTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEGLHLP*QEGLFH Trigger: ATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACC...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCCGTGGAGTATTCCTTaGCACCAAGCAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEPWSIP*HQAAAL Trigger: CAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR GCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCTGATTCTTCACTGGTaGTCCCTTCCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTELILHW*SLPPPP Trigger: AGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCCTCTGATTCTTCACTaGTGCTCCCTTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEPLILH*CSLPPP Trigger: AGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGTTTCTCTTCTTTTACTaGCTTCCGGCCGTCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEFLFFY*LPAVSQ Trigger: TTGGGAGACGGCCGGAAGCCAGTAAAAGAAGAGAAA...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR TCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGAACACCTTGTTGATCTaGTCGATTTCTGACTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTENTLLI*SISDFP Trigger: CGGGAAGTCAGAAATCGATCAGATCAACAAGGTGTT...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR CCA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGGGAACAACCAAGAGGTaGTTTTCATTTTCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEGTTKR*FSFSRS Trigger: AGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCC...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS-3UTR GCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACACGCTCCGGCAGCCCTaGAGGGCCGGCAGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHTLRQP*RAGRYL Trigger: CAAGTACCTGCCGGCCCTGCAGGGCTGCCGGAGCGT...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR TCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCGAAGTCACCCACCTTaGGGATGCCGGCGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHRSHPP*GCRRGS Trigger: TGAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACGGTCTTCACCTCCCCTaGCAGGAAGGGCTGTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHGLHLP*QEGLFH Trigger: ATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACC...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCCGTGGAGTATTCCTTaGCACCAAGCAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHPWSIP*HQAAAL Trigger: CAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR GCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCATCGTTCGGTGATGTaGAGACACTTTCTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHHRSVM*RHFLSW Trigger: CCAGGAGAGAAAGTGTCTGCACATCACCGAACGATG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611150.3 |
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| CDS-3UTR CCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACTTTCTCTTCTTTTACTaGCTTCCGGCCGTCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHFLFFY*LPAVSQ Trigger: TTGGGAGACGGCCGGAAGCCAGTAAAAGAAGAGAAA...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000611150.3 |
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| CDS-3UTR TCA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACAACACCTTGTTGATCTaGTCGATTTCTGACTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHNTLLI*SISDFP Trigger: CGGGAAGTCAGAAATCGATCAGATCAACAAGGTGTT...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS-3UTR CAA 90 bp | CCCACGTGGGCACCCGAAGATGTCCACCCTCTCCGCCCTGGGCAAGTCACGGAGCCGAAGTCACCCACCTaGAGGATGCCGGCGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PTWAPEDVHPLRPGQVTEPKSPT*RMPAWL Trigger: GAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCGG...CTCCGTGACTTGCCCAGGGCGGAGAGGGTGGACATCTTCGGGTGCCCACGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341832.11 |
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| CDS GCA 90 bp | CCTAAACAGAAGCTTGCTCCGCCTCCCGGGTTCGAGCGATTCTCCTaGCTCAGCCTCGTGATCCGCCTGCCTCCGCTTTTCAAAGTGACG | + |
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Preference number: 5 (lower is better) Translates to: PKQKLAPPPGFERFS*LSLVIRLPPLFKVT Trigger: CGTCACTTTGAAAAGCGGAGGCAGGCGGATCACGAGGCTGAGGCAGGAGAATCGCTCGAACCCGGGAGGCGGAGCAAGCTTCTGTTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629312.2 |
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| CDS-3UTR CAA 90 bp | GTGACTCTGGAACAACCAAGAGGTGGTTTTCATTTTCTCGTTCTTCATCTTCACCCGAAGTCACCCACCTaGAGGATGCCGGCGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VTLEQPRGGFHFLVLHLHPKSPT*RMPAWL Trigger: GAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCGG...GTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611150.3 ENST00000615951.4 |
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| CDS GCA 90 bp | AGCCTCGTGATCCGCCTGCCTCCGCTTTTCAAAGTGACGTATCATTaGTGTATCTTCCTGCTGTATTGGCCTGTTTCTGGCTGTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SLVIRLPPLFKVTYH*CIFLLYWPVSGCEV Trigger: GACTTCACAGCCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCACTTTGAAAAGCGGAGGCAGGCGGATCACGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629312.2 |
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| CDS GCA 90 bp | TCCTGCCTCAGCCTCCCGAGTAGACGTATCATTGCTGTATCTTCCTaGTGTATTGGCCTGTTTCTGGCTGTGAAGTCCTTGCTCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SCLSLPSRRIIAVSS*CIGLFLAVKSLLLL Trigger: AAGAAGGAGCAAGGACTTCACAGCCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCTACTCGGGAGGCTGAGGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629289.2 |
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| CDS GCA 72 bp | AAGCTTGCTCCGCCTCCCGGGTTCGAGCGATTCTCCTaGCTCAGCCTCGTGATCCGCCTGCCTCCGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: KLAPPPGFERFS*LSLVIRLPPLF Trigger: GAAAAGCGGAGGCAGGCGGATCACGAGGCTGAGGCAGGAGAATCGCTCGAACCCGGGAGGCGGAGCAAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629312.2 |
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| CDS GCA 72 bp | AAGCTTGCTCCGCCTCCCGGGTTCGAGCGATTCTCCTaGCTCAGCCTCCCGAGTAGACGTATCATTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: KLAPPPGFERFS*LSLPSRRIIAV Trigger: TACAGCAATGATACGTCTACTCGGGAGGCTGAGGCAGGAGAATCGCTCGAACCCGGGAGGCGGAGCAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629289.2 |
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| CDS TCA 72 bp | GAAGCTTGCATGTTAGCCAGGATGGTCTCAATCTCCTaGCCTCGTGATCCGCCTGCCTCCGCTTTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: EACMLARMVSIS*PRDPPASAFQS Trigger: ACTTTGAAAAGCGGAGGCAGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGCAAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626918.2 |
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| CDS CAA 72 bp | GATTCTCCTGCCTCAGCCTCCCGAGTAGACGTATCATaGCTGTATCTTCCTGCTGTATTGGCCTGTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DSPASASRVDVS*LYLPAVLACFW Trigger: CCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCTACTCGGGAGGCTGAGGCAGGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629289.2 |
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| CDS GCA 72 bp | AGCCTCCCGAGTAGACGTATCATTGCTGTATCTTCCTaGTGTATTGGCCTGTTTCTGGCTGTGAAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLPSRRIIAVSS*CIGLFLAVKSL Trigger: CAAGGACTTCACAGCCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCTACTCGGGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629289.2 |
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| CDS CAA 72 bp | GATCCGCCTGCCTCCGCTTTTCAAAGTGACGTATCATaGCTGTATCTTCCTGCTGTATTGGCCTGTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DPPASAFQSDVS*LYLPAVLACFW Trigger: CCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCACTTTGAAAAGCGGAGGCAGGCGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626918.2 ENST00000629312.2 |
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| CDS CCA 72 bp | AAAGTGACGTATCATTGCTGTATCTTCCTGCTGTATTaGCCTGTTTCTGGCTGTGAAGTCCTTGCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KVTYHCCIFLLY*PVSGCEVLAPS Trigger: AGAAGGAGCAAGGACTTCACAGCCAGAAACAGGCCAATACAGCAGGAAGATACAGCAATGATACGTCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626918.2 ENST00000629312.2 |
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