Pregenerated sensors for CDK11A (Homo sapiens)
Ensembl gene IDs: ENSG00000008128Ensembl transcript IDs: ENST00000356200.7, ENST00000357760.6, ENST00000358779.9, ENST00000378633.5, ENST00000378638.6, ENST00000404249.8, ENST00000460465.5, ENST00000479362.1, ENST00000498810.1, ENST00000509982.5
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 72 bp | GATCTCTCAGCTCCCCCTCCTCAAGGGAATCCCGCTTaGAATCCCGGTCATCAGACTGCGACATTTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLSAPPPQGNPA*NPGHQTATFGS Trigger: ACTTCCAAATGTCGCAGTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356200.7 ENST00000378638.6 |
||
| CDS TCA 72 bp | CTATACGGGGAGTTCCTTATTGTGATCTCCATGCAGTaGTCTCTCAGCTCCCCCTCCTCAAGGGAATCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LYGEFLIVISMQ*SLSSPSSRESR Trigger: GCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000356200.7 ENST00000357760.6 ENST00000358779.9 ENST00000378633.5 ENST00000378638.6 ENST00000404249.8 ENST00000460465.5 ENST00000479362.1 ENST00000498810.1 ENST00000509982.5 |
||
| CDS CCA 72 bp | GATCTCTCAGCTCCCCCTCCTCAAGGGAATCCCGCTTaGAATCCCGGTCATCAGACTAAGAAGCAAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DLSAPPPQGNPA*NPGHQTKKQRE Trigger: TTCTCTTTGCTTCTTAGTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498810.1 |
||
| CDS TCA 72 bp | TTGAGTCTTCTCTTCTATACGGGGAGTTCCTTATTGTaGTCTCCATGCAGTGATCTCTCAGCTCCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSLLFYTGSSLL*SPCSDLSAPPP Trigger: AGGAGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000356200.7 ENST00000357760.6 ENST00000358779.9 ENST00000378633.5 ENST00000378638.6 ENST00000404249.8 ENST00000460465.5 ENST00000479362.1 ENST00000498810.1 ENST00000509982.5 |
||