Pregenerated sensors for CDK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170312Ensembl transcript IDs: ENST00000316629.8, ENST00000373809.2, ENST00000395284.8, ENST00000448257.6, ENST00000475504.6, ENST00000487784.1, ENST00000519078.6, ENST00000614696.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAGCTACATCTTCTTAATCTGATTGTCCAAATCATTAAAATATaGATGATTCAGTGCCATTTTGCCAGAAATTCGTTTGGCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: RKLHLLNLIVQIIKI*MIQCHFARNSFGWI Trigger: GATCCAGCCAAACGAATTTCTGGCAAAATGGCACTGAATCATCCATATTTTAATGATTTGGACAATCAGATTAAGAAGATGTAGCTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTACTGTTCTTCCCTGTTaGGGACAGCCCTTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: VKMCSFKLRLESQDKQLLTVLPC*GQPLIF Trigger: AAAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACACTGTTCTTCCCTGTTaGGGACAGCCCTTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: VVLNSDSKAKISNSFSYYTVLPC*GQPLIF Trigger: AAAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACAACTGCCATAAGGACTaGGATGATTTAAGCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: VVLNSDSKAKISNSFSYYNCHKD*DDLSQL Trigger: GAGTTGGCTTAAATCATCTCAGTCCTTATGGCAGTT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTAACTGCCATAAGGACTaGGATGATTTAAGCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: VKMCSFKLRLESQDKQLLNCHKD*DDLSQL Trigger: GAGTTGGCTTAAATCATCTCAGTCCTTATGGCAGTT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTAACTGCCATAAGGACTaGGATGATTTAAGCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: PLIFVRLSKFWHALMLAFNCHKD*DDLSQL Trigger: GAGTTGGCTTAAATCATCTCAGTCCTTATGGCAGTT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCTTCAGTTATTACTCTaGCCAAGGCATAAGAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: VKMCSFKLRLESQDKQLLLQLLL*PRHKNS Trigger: TGAATTCTTATGCCTTGGTCAGAGTAATAACTGAAG...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTATATGGATGATTCAGTaGCATTTTGCCAGAAATTCG | + |
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Preference number: 2 (lower is better) Translates to: PLIFVRLSKFWHALMLAFIWMIQ*HFARNS Trigger: CGAATTTCTGGCAAAATGGCACTGAATCATCCATAT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTAGACTTAGCAAATTTTaGCATGCTCTCATGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: VKMCSFKLRLESQDKQLLRLSKF*HALMLA Trigger: AGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR CCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACAGACTTAGCAAATTTTaGCATGCTCTCATGTTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVLNSDSKAKISNSFSYYRLSKF*HALMLA Trigger: AGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR CAA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTAACTGTTCTTCCCTGTaGCGGACAGCCCTTGATCTT | + |
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Preference number: 3 (lower is better) Translates to: VKMCSFKLRLESQDKQLLNCSSL*RTALDL Trigger: AAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGTT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR CCA 72 bp | AGCAAATCCAAGCCATTTTCATCCAAGTTTTTGACATaGGATGCTAGGCTTCCTGGTTTCCATTTGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: SKSKPFSSKFLT*DARLPGFHLGN Trigger: ATTTCCCAAATGGAAACCAGGAAGCCTAGCATCCCATGTCAAAAACTTGGATGAAAATGGCTTGGATTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| 3UTR-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTGTTGCGGACAGCCCTaGATCTTTGTAAGACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: VVLNSDSKAKISNSFSYYCCGQP*IFVRLS Trigger: GCTAAGTCTTACAAAGATCAAGGGCTGTCCGCAACA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| 3UTR-3UTR CAA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTGTTGCGGACAGCCCTaGATCTTTGTAAGACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VKMCSFKLRLESQDKQLLCCGQP*IFVRLS Trigger: GCTAAGTCTTACAAAGATCAAGGGCTGTCCGCAACA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTCCAAGAGCCAGCTTTaGAGCCAAGTGCGAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLSKSQL*SQVRAV Trigger: AACTGCTCGCACTTGGCTTCAAAGCTGGCTCTTGGA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316629.8 |
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| 3UTR CAA 72 bp | TTCGAGAGCAAATCCAAGCCATTTTCATCCAAGTTTTaGACATGGGATGCTAGGCTTCCTGGTTTCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FESKSKPFSSKF*TWDARLPGFHL Trigger: CAAATGGAAACCAGGAAGCCTAGCATCCCATGTCAAAAACTTGGATGAAAATGGCTTGGATTTGCTCTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: WEMYSYSPVKIPLLATLHEESMY*PGGIES Trigger: GGATTCTATCCCTCCTGGTCAGTACATGGATTCTTC...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYEESMY*PGGIES Trigger: GGATTCTATCCCTCCTGGTCAGTACATGGATTCTTC...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLEESMY*PGGIES Trigger: GGATTCTATCCCTCCTGGTCAGTACATGGATTCTTC...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFEESMY*PGGIES Trigger: GGATTCTATCCCTCCTGGTCAGTACATGGATTCTTC...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTACTGTTCTTCCCTGTTaGGGACAGCCCTTGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFTVLPC*GQPLIF Trigger: AAAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTCCAAGTTTTTGACATaGGATGCTAGGCTTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFSKFLT*DARLPG Trigger: ACCAGGAAGCCTAGCATCCCATGTCAAAAACTTGGA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTCCAAGTTTTTGACATaGGATGCTAGGCTTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYSKFLT*DARLPG Trigger: ACCAGGAAGCCTAGCATCCCATGTCAAAAACTTGGA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTTTCATCCAAGTTTTTaGCATGGGATGCTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFFHPSF*HGMLGF Trigger: GAAGCCTAGCATCCCATGTCAAAAACTTGGATGAAA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTTTCATCCAAGTTTTTaGCATGGGATGCTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLFHPSF*HGMLGF Trigger: GAAGCCTAGCATCCCATGTCAAAAACTTGGATGAAA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTTTCATCCAAGTTTTTaGCATGGGATGCTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYFHPSF*HGMLGF Trigger: GAAGCCTAGCATCCCATGTCAAAAACTTGGATGAAA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | ATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATTATTGGAACTGCCATAAGGACTaGGATGATTTAAGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: MYSYSPVKIPLLATLHYWNCHKD*DDLSQL Trigger: GAGTTGGCTTAAATCATCTCAGTCCTTATGGCAGTT...CCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACAGAACTCTTCTAGAGTaGCAAAACACAATCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYRTLLE*QNTIPC Trigger: ACAGGGGATTGTGTTTTGTCACTCTAGAAGAGTTCT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTAGAACTCTTCTAGAGTaGCAAAACACAATCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFRTLLE*QNTIPC Trigger: ACAGGGGATTGTGTTTTGTCACTCTAGAAGAGTTCT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | ATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATTATTGGAGAACTCTTCTAGAGTaGCAAAACACAATCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: MYSYSPVKIPLLATLHYWRTLLE*QNTIPC Trigger: ACAGGGGATTGTGTTTTGTCACTCTAGAAGAGTTCT...CCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTAGAAATTTCCCGAATTaGAGTACTAGGAACCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLRNFPN*STRNPF Trigger: GAAGGGGTTCCTAGTACTGCAATTCGGGAAATTTCT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACAGAAATTTCCCGAATTaGAGTACTAGGAACCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYRNFPN*STRNPF Trigger: GAAGGGGTTCCTAGTACTGCAATTCGGGAAATTTCT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTACTACCTTAACAAGTaGAGAATCCATGTACTGACC | + |
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Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFYYLNK*RIHVLT Trigger: GGTCAGTACATGGATTCTTCACTTGTTAAGGTAGTA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316629.8 ENST00000373809.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATCTTCAGTTATTACTCTaGCCAAGGCATAAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: WEMYSYSPVKIPLLATLHLQLLL*PRHKNS Trigger: TGAATTCTTATGCCTTGGTCAGAGTAATAACTGAAG...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATAGACTTAGCAAATTTTaGCATGCTCTCATGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: WEMYSYSPVKIPLLATLHRLSKF*HALMLA Trigger: AGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCT...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACCTTCAGTTATTACTCTaGCCAAGGCATAAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYLQLLL*PRHKNS Trigger: TGAATTCTTATGCCTTGGTCAGAGTAATAACTGAAG...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTATAACTCTTAACAAGTaGAGAATCCATGTACTGACC | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLITLNK*RIHVLT Trigger: GGTCAGTACATGGATTCTTCACTTGTTAAGAGTTAT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACATATGGATGATTCAGTaGCATTTTGCCAGAAATTCG | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYIWMIQ*HFARNS Trigger: CGAATTTCTGGCAAAATGGCACTGAATCATCCATAT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTATATGGATGATTCAGTaGCATTTTGCCAGAAATTCG | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLIWMIQ*HFARNS Trigger: CGAATTTCTGGCAAAATGGCACTGAATCATCCATAT...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR GCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTGTACCAGAGTGTTATTaGCTCATGTGTATATACTCT | + |
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Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLVPECY*LMCIYS Trigger: AGAGTATATACACATGAGGCAATAACACTCTGGTAC...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448257.6 |
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| CDS-3UTR CCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACCTAGTTCAGCAAATATaGTGCCTATACTCCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYLVQQI*CLYSKC Trigger: ACATTTGGAGTATAGGCACCATATTTGCTGAACTAG...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTCTAGTTCAGCAAATATaGTGCCTATACTCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFLVQQI*CLYSKC Trigger: ACATTTGGAGTATAGGCACCATATTTGCTGAACTAG...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCTAGTTCAGCAAATATaGTGCCTATACTCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLLVQQI*CLYSKC Trigger: ACATTTGGAGTATAGGCACCATATTTGCTGAACTAG...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTGCCAGAAATTCGTTTaGCTGGATCATAGATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VKMCSFKLRLESQDKQLLCQKFV*LDHRLT Trigger: TGTTAATCTATGATCCAGCCAAACGAATTTCTGGCA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTGCCAGAAATTCGTTTaGCTGGATCATAGATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFCQKFV*LDHRLT Trigger: TGTTAATCTATGATCCAGCCAAACGAATTTCTGGCA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTGCCAGAAATTCGTTTaGCTGGATCATAGATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYCQKFV*LDHRLT Trigger: TGTTAATCTATGATCCAGCCAAACGAATTTCTGGCA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTAGACTTAGCAAATTTTaGCATGCTCTCATGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFRLSKF*HALMLA Trigger: AGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACATTTCTGAATCCCCATaGAAAAGTGGTTTCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLNSDSKAKISNSFSYYISESP*KSGFLV Trigger: AACTAAGAAACCACTTTTCCATGGGGATTCAGAAAT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CCA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTATTTCTGAATCCCCATaGAAAAGTGGTTTCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLIFVRLSKFWHALMLAFISESP*KSGFLV Trigger: AACTAAGAAACCACTTTTCCATGGGGATTCAGAAAT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
||
| CDS-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTTCCAAGAGCCAGCTTaGAAGCCAAGTGCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVLNSDSKAKISNSFSYYFQEPA*KPSASS Trigger: ACTGCTCGCACTTGGCTTCAAAGCTGGCTCTTGGAA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316629.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTGGCCACACTTCATTATaGGGAGTGCCCAAAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKMCSFKLRLESQDKQLLGHTSL*GVPKAL Trigger: CAGAGCTTTGGGCACTCCCAATAATGAAGTGTGGCC...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTGGCCACACTTCATTATaGGGAGTGCCCAAAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLIFVRLSKFWHALMLAFGHTSL*GVPKAL Trigger: CAGAGCTTTGGGCACTCCCAATAATGAAGTGTGGCC...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 |
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| CDS-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACGGCCACACTTCATTATaGGGAGTGCCCAAAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVLNSDSKAKISNSFSYYGHTSL*GVPKAL Trigger: CAGAGCTTTGGGCACTCCCAATAATGAAGTGTGGCC...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 |
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| CDS-3UTR CAA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATGGCCACACTTCATTATaGGGAGTGCCCAAAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: WEMYSYSPVKIPLLATLHGHTSL*GVPKAL Trigger: TAGAGCTTTGGGCACTCCCAATAATGAAGTGTGGCC...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATTGTTGCGGACAGCCCTaGATCTTTGTAAGACTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WEMYSYSPVKIPLLATLHCCGQP*IFVRLS Trigger: GCTAAGTCTTACAAAGATCAAGGGCTGTCCGCAACA...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACAACTGTTCTTCCCTGTaGCGGACAGCCCTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVLNSDSKAKISNSFSYYNCSSL*RTALDL Trigger: AAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGTT...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTAACTGTTCTTCCCTGTaGCGGACAGCCCTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLIFVRLSKFWHALMLAFNCSSL*RTALDL Trigger: AAGATCAAGGGCTGTCCGCAACAGGGAAGAACAGTT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS TCA 90 bp | CTGTACCAGAGTGTTACTACCTTAACAAGTGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCCAAGTATTTCTTCAGATCCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYQSVTTLTSEESMY*PGGIESKYFFRSME Trigger: TTCCATGGATCTGAAGAAATACTTGGATTCTATCCCTCCTGGTCAGTACATGGATTCTTCACTTGTTAAGGTAGTAACACTCTGGTACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316629.8 ENST00000373809.2 |
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| CDS-3UTR CAA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTAAATGTCAACTGGAGTaGAGTAACGAGCTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLIFVRLSKFWHALMLAFKCQLE*SNELTP Trigger: TGGGGTCAGCTCGTTACTCAACTCCAGTTGACATTT...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTGTTGCGGACAGCCCTaGATCTTTGTAAGACTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLIFVRLSKFWHALMLAFCCGQP*IFVRLS Trigger: GCTAAGTCTTACAAAGATCAAGGGCTGTCCGCAACA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | TGGGAAATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATTTTCATGGCTACCACTaGACCTGTAGTTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WEMYSYSPVKIPLLATLHFHGYH*TCSFVS Trigger: AGACACAAAACTACAGGTCAAGTGGTAGCCATGAAA...ATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACATTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTTTCATGGCTACCACTaGACCTGTAGTTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLNSDSKAKISNSFSYYFHGYH*TCSFVS Trigger: AGACACAAAACTACAGGTCAAGTGGTAGCCATGAAA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTTTCATGGCTACCACTaGACCTGTAGTTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VKMCSFKLRLESQDKQLLFHGYH*TCSFVS Trigger: AGACACAAAACTACAGGTCAAGTGGTAGCCATGAAA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | GTCAAAATGTGTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTTTTTCATCCAAGTTTTaGACATGGGATGCTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKMCSFKLRLESQDKQLLFSSKF*TWDARL Trigger: AAGCCTAGCATCCCATGTCAAAAACTTGGATGAAAA...AAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTACACATTTTGAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | CCCTTGATCTTTGTAAGACTTAGCAAATTTTGGCATGCTCTCATGTTAGCTTTTTTTTCATCCAAGTTTTaGACATGGGATGCTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLIFVRLSKFWHALMLAFFSSKF*TWDARL Trigger: AAGCCTAGCATCCCATGTCAAAAACTTGGATGAAAA...AAAAGCTAACATGAGAGCATGCCAAAATTTGCTAAGTCTTACAAAGATCAAGGG 38% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | ATGTATTCTTATAGTCCTGTAAAGATTCCACTTCTGGCCACACTTCATTATTGGTTTTCATCCAAGTTTTaGACATGGGATGCTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MYSYSPVKIPLLATLHYWFSSKF*TWDARL Trigger: AAGCCTAGCATCCCATGTCAAAAACTTGGATGAAAA...CCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGACTATAAGAATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614696.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTTTAAACTCAGACTCGAAAGCCAAGATAAGCAACTCCTTCAGTTATTACTGTACCAGAGTGTTATaGCCTCATGTGTATATACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVLNSDSKAKISNSFSYYCTRVL*PHVYIL Trigger: GAGTATATACACATGAGGCAATAACACTCTGGTACA...GTAATAACTGAAGGAGTTGCTTATCTTGGCTTTCGAGTCTGAGTTTAAAACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448257.6 |
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| CDS CCA 72 bp | AGACTTTCAAAGCAGCCAATCAGAGCCCAGCTACGCTaGGCAGGCCTTCCCGGGTGGCTAGAGCGCGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSKQPIRAQLR*AGLPGWLERER Trigger: TCTTTCGCGCTCTAGCCACCCGGGAAGGCCTGCCCAGCGTAGCTGGGCTCTGATTGGCTGCTTTGAAAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519078.6 |
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| CDS TCA 72 bp | CGCGTCGCTCTCCGCTCAATTTCCAAGAGCCAGCTTTaGAGCCAAGTGCGAGCAGTTTCAAACTCACCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVALRSISKSQL*SQVRAVSNSPR Trigger: GCGCGGTGAGTTTGAAACTGCTCGCACTTGGCTTCAAAGCTGGCTCTTGGAAATTGAGCGGAGAGCGACGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316629.8 |
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| CDS CAA 72 bp | CCGCGTCGCTCTCCGCTCAATTTCCAAGAGCCAGCTTaGAAGCCAAGTGCGAGCAGTTTCAAACTCACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRRSPLNFQEPA*KPSASSFKLTA Trigger: CGCGGTGAGTTTGAAACTGCTCGCACTTGGCTTCAAAGCTGGCTCTTGGAAATTGAGCGGAGAGCGACGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316629.8 |
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| CDS CAA 90 bp | CTAGTTCAGCAAATATGGTGCCTATACTCCAAATGTCAACTGGAGTaGAGTAACGAGCTGACCCCAGCAATACTTCTGGAGATCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LVQQIWCLYSKCQLE*SNELTPAILLEICT Trigger: GGTACAGATCTCCAGAAGTATTGCTGGGGTCAGCTCGTTACTCAACTCCAGTTGACATTTGGAGTATAGGCACCATATTTGCTGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS CAA 72 bp | CAAATATGGTGCCTATACTCCAAATGTCAACTGGAGTaGAGTAACGAGCTGACCCCAGCAATACTTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QIWCLYSKCQLE*SNELTPAILLE Trigger: CTCCAGAAGTATTGCTGGGGTCAGCTCGTTACTCAACTCCAGTTGACATTTGGAGTATAGGCACCATATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 ENST00000614696.4 |
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| CDS CAA 72 bp | TCCTGTAAAGATTCCACTTCTGGCCACACTTCATTATaGGGAGTGCCCAAAGCTCTGAAAATCCTGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCKDSTSGHTSL*GVPKALKILKS Trigger: ACTCTTCAGGATTTTCAGAGCTTTGGGCACTCCCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000316629.8 ENST00000373809.2 ENST00000395284.8 ENST00000448257.6 |
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| CDS TCA 72 bp | AGTGTTACTACCTTAACAAGTGAAGAATCCATGTACTaGCCAGGAGGGATAGAATCCAAGTATTTCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVTTLTSEESMY*PGGIESKYFFR Trigger: TCTGAAGAAATACTTGGATTCTATCCCTCCTGGTCAGTACATGGATTCTTCACTTGTTAAGGTAGTAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316629.8 ENST00000373809.2 |
||
| CDS CCA 72 bp | ATTACAAATAAAACTAACAGCGCTACCTCTGCAGAGTaGTTTGGTAGAACTGGTGCAAGAATAAGACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: ITNKTNSATSAE*FGRTGARIRHF Trigger: AAAGTGTCTTATTCTTGCACCAGTTCTACCAAACCACTCTGCAGAGGTAGCGCTGTTAGTTTTATTTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475504.6 |
||
| CDS CCA 72 bp | CTTTCAGGCCATTTTAGGCTAATAAGCATTTGTGGGTaGGAAGCCCATTTATATACAACATCACATTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LSGHFRLISICG*EAHLYTTSHLY Trigger: ATACAAATGTGATGTTGTATATAAATGGGCTTCCCACCCACAAATGCTTATTAGCCTAAAATGGCCTGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487784.1 |
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