RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089486

Ensembl transcript IDs: ENST00000399599.7, ENST00000562334.5, ENST00000562579.5, ENST00000563186.5, ENST00000563332.6, ENST00000563507.5, ENST00000564828.5, ENST00000566234.2, ENST00000567695.6, ENST00000586728.5, ENST00000586768.1, ENST00000588381.1, ENST00000589159.5, ENST00000589890.1, ENST00000611166.2, ENST00000631859.1, ENST00000631926.1, ENST00000632367.1, ENST00000632554.1, ENST00000632680.1, ENST00000632937.1, ENST00000633324.1, ENST00000633395.1, ENST00000633452.1, ENST00000633564.1, ENST00000633690.1, ENST00000634168.1, ENST00000634209.1

Found 1238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTaGGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCT +
Preference number: 1 (lower is better)
Translates to: VGIHQPPGRGHTHTQ*GHRADGKGLGSGAP
Trigger: AGGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR CCA 90 bp GCCTCAGCCCAGTCTGTGTTGCTTAAGGGTGCGCCTCCCCAGGGCTaGATGATGCTGTGCTCAAGCCTGCGGGTAGGAGGGCTCCAGCTT +
Preference number: 1 (lower is better)
Translates to: ASAQSVLLKGAPPQG*MMLCSSLRVGGLQL
Trigger: AAGCTGGAGCCCTCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGCACCCTTAAGCAACACAGACTGGGCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR GCA 90 bp GGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGAGG +
Preference number: 1 (lower is better)
Translates to: GEGSAHPSAPTRGTL*HLLPSWDTPATRQR
Trigger: CCTCTGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR GCA 90 bp TCTGTGTTGCTTAAGGGTGCGCCTCCCCAGGGCTGGATGATGCTGTaGTCAAGCCTGCGGGTAGGAGGGCTCCAGCTTGCAGATCCCATG +
Preference number: 1 (lower is better)
Translates to: SVLLKGAPPQGWMML*SSLRVGGLQLADPM
Trigger: CATGGGATCTGCAAGCTGGAGCCCTCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGCACCCTTAAGCAACACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR TCA 90 bp TTGGTGTTGTCCCAGGCAGTTGGCATGGCATCAGCACTGAGGGTGTaGGACCCTGAGGACTCAGCCTCCCGTCCTGCCAGTAGACTGCCT +
Preference number: 1 (lower is better)
Translates to: LVLSQAVGMASALRV*DPEDSASRPASRLP
Trigger: AGGCAGTCTACTGGCAGGACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTCAGTGCTGATGCCATGCCAACTGCCTGGGACAACACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR GCA 90 bp GGTCGCCCAGAACCTGCGTGTGCAGACTGCGCTCTGTTAGTCTTCTaGCTGTCAGCCTCAGCCCAGTCTGTGTTGCTTAAGGGTGCGCCT +
Preference number: 1 (lower is better)
Translates to: GRPEPACADCALLVF*LSASAQSVLLKGAP
Trigger: AGGCGCACCCTTAAGCAACACAGACTGGGCTGAGGCTGACAGGCAGAAGACTAACAGAGCGCAGTCTGCACACGCAGGTTCTGGGCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR TCA 90 bp CTTACGTGTTGGTGTTGTCCCAGGCAGTTGGCATGGCATCAGCACTaGGGGTGTGAGACCCTGAGGACTCAGCCTCCCGTCCTGCCAGTA +
Preference number: 1 (lower is better)
Translates to: LTCWCCPRQLAWHQH*GCETLRTQPPVLPV
Trigger: TACTGGCAGGACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTCAGTGCTGATGCCATGCCAACTGCCTGGGACAACACCAACACGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR TCA 90 bp AGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCCCACCTGACTCCAGACAACTTACCC +
Preference number: 1 (lower is better)
Translates to: STPEAQSTQKQTQAL*PCPTWAHLTPDNLP
Trigger: GGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 90 bp GGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTT +
Preference number: 1 (lower is better)
Translates to: GSFRPQQYRVHRGMA*KGVCTLTQRDKFLL
Trigger: AAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR TCA 90 bp AGAAACAAACCCAGGCTTTGTGACCCTGTCCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: RNKPRLCDPVLRGPT*LQTTYPFSAQQVRN
Trigger: GTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 90 bp CTACCAGGGTCTGATCATTCACCCAGGTACAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGGCACTGGGACAGGGTATTAGACATC +
Preference number: 1 (lower is better)
Translates to: LPGSDHSPRYSVLST*HQAALGHWDRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGGGTGAATGATCAGACCCTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR CCA 90 bp CTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGTTTGGAAACAGAGGCATCAGGACCC +
Preference number: 1 (lower is better)
Translates to: LANCSGCCWSQGERV*TEPVPCLETEASGP
Trigger: GGGTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR CCA 90 bp GTGACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTaGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCA +
Preference number: 1 (lower is better)
Translates to: VTGGHAVAVRDQEGQ*QDTVVQVSKFTNHS
Trigger: TGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR CCA 90 bp GCCCAGTCACAGCTGGAAATCCCAGGGCTGGTCTACACCCGACTCTaGTTTGGTTTAATTAGGTCCTTACGTGTTGGTGTTGTCCCAGGC +
Preference number: 1 (lower is better)
Translates to: AQSQLEIPGLVYTRL*FGLIRSLRVGVVPG
Trigger: GCCTGGGACAACACCAACACGTAAGGACCTAATTAAACCAAACCAGAGTCGGGTGTAGACCAGCCCTGGGATTTCCAGCTGTGACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR TCA 90 bp GATGCCATATATAGATGGTTGAAACCAGCATCAGAGGAAGGAAGGTaGCCTTACAGCCACTGCCGAGACCAACGTGTGCCCTGGCCCAGT +
Preference number: 1 (lower is better)
Translates to: DAIYRWLKPASEEGR*PYSHCRDQRVPWPS
Trigger: ACTGGGCCAGGGCACACGTTGGTCTCGGCAGTGGCTGTAAGGTCACCTTCCTTCCTCTGATGCTGGTTTCAACCATCTATATATGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR TCA 90 bp GCTCCAGCTTGCAGATCCCATGCGTGGATGCCATATATAGATGGTTaGAACCAGCATCAGAGGAAGGAAGGTGACCTTACAGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: APACRSHAWMPYIDG*NQHQRKEGDLTATA
Trigger: GGCAGTGGCTGTAAGGTCACCTTCCTTCCTCTGATGCTGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR GCA 90 bp ACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGCCTTAAATCCCAACAGAATTTTTGC +
Preference number: 1 (lower is better)
Translates to: THQADQQHTSSLSAP*HPLTLGLKSQQNFC
Trigger: GCAAAAATTCTGTTGGGATTTAAGGCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 90 bp AATTTAATGAGAAACTACAAACTGAGACTGGGCCACGATTCACAGTaGCAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGT +
Preference number: 1 (lower is better)
Translates to: NLMRNYKLRLGHDSQ*QEAMQWQCETRKDS
Trigger: ACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTCAGTTTGTAGTTTCTCATTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR TCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ARLPAPSGSGKVTTEHRERTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp CCACCATGCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: PPCPTSSTPEAQSTQKQTHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGCATGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAACTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 2 (lower is better)
Translates to: QAQQQPVSWGEGPGTYRELQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: ARLPAPSGSGKVTTEHRETSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LLGDGGTAPSPKWERESDRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 2 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLAACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: THSRPSRSETPVATGLGTTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp ACACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTGCCACCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: THTKQTNNTQAHCQPPATHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: LLGDGGTAPSPKWERESDRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAACTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 2 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: QAQQQPVSWGEGPGTYREANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGAACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 2 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAATCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLAAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CCCAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PSRRPLPAYLPDHTHQADRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: RGWCPPRQFYHLWLLLPRRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...ACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLARTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CCACCATGCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PPCPTSSTPEAQSTQKQTRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGCATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCAGCAGCTCTCGGGCACTaGGACAGGGTATTAGACATC +
Preference number: 2 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAAALGH*DRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGC...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACACGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: RGWCPPRQFYHLWLLLPRQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...ACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp AGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAGTAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 2 (lower is better)
Translates to: RRPCSGSARPGRTVAGYSSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...ACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR TCA 90 bp GCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: AGVHQGSSTTCGCSFLVPHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...AGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTCCAGATCACATCCCATaGAGCAACAGAAGAAACCCA +
Preference number: 2 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAPDHIP*SNRRNP
Trigger: TGGGTTTCTTCTGTTGCTTCATGGGATGTGATCTGG...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
3UTR-3UTR GCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACATACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: LPEESAAQVGQGEEDRTSAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...AGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR CCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 2 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLAGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGCAGCTCTCGGGCACTaGGACAGGGTATTAGACATC +
Preference number: 2 (lower is better)
Translates to: SYPHAVRTQGRREGARLRAALGH*DRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGC...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTGCAGCTCTCGGGCACTaGGACAGGGTATTAGACATC +
Preference number: 2 (lower is better)
Translates to: RQRSYPHAVRTQGRREGAAALGH*DRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGC...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp AAGGGGGACCCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGGGTTCACAGAGGCATaGCCTGAAAGGGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: KGDPLPSLAQLGYTSHQAGFTEA*PERGSA
Trigger: TGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCC...TGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAAGACAGGGCGAGGCTaGTGTCCACCAAGGCAGTTC +
Preference number: 2 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYKTGRG*CPPRQF
Trigger: GAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR TCA 90 bp GAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAACAGAGGCATCAGGACCCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: ERVWTEPVPCLETEASGPHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGGTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGACGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GGCTTTGTGACCCTGTCCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: GFVTLSYVGPPDSRQLTHSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...ATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCATCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAATCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp CCACCATGCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: PPCPTSSTPEAQSTQKQTANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...GGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGCATGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCTACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCAGCTGGGGCATGTGTaGGTCACATCCTTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWEQLGHV*VTSLKS
Trigger: TGACTTCAAGGATGTGACGCACACATGCCCCAGCTG...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR GCA 90 bp GCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATCAGCTGGGGCATGTGTaGGTCACATCCTTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: AGESRVPAPLAQALVRVDQLGHV*VTSLKS
Trigger: TGACTTCAAGGATGTGACGCACACATGCCCCAGCTG...ATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR GCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTGTAGATGTAGGCTTTaGAGCTGGGGCATGTGTGCG +
Preference number: 2 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGCRCRL*SWGMCA
Trigger: CGCACACATGCCCCAGCTGCAAAGCCTACATCTACA...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR GCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGTGTAGATGTAGGCTTTaGAGCTGGGGCATGTGTGCG +
Preference number: 2 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWECRCRL*SWGMCA
Trigger: CGCACACATGCCCCAGCTGCAAAGCCTACATCTACA...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp CAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCAACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: QQETPPSLSSRSHTPSRPTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...TGGTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGAGTCTACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GTNWLTALAAVGPRGKESTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...AGACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: LPEESAAQVGQGEEDRTSTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...AGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCACAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAQGERV*TEPVPC
Trigger: ACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTG...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp AGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAGTGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RRPCSGSARPGRTVAGYSGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...ACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR CCA 90 bp CGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RGWCPPRQFYHLWLLLPRGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...ACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGGCAGCTCTCGGGCACTaGGACAGGGTATTAGACATC +
Preference number: 2 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRAALGH*DRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGC...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCAAGACAGGGCGAGGCTaGTGTCCACCAAGGCAGTTC +
Preference number: 2 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLKTGRG*CPPRQF
Trigger: GAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGCTTTGTGACCCTGTCCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GFVTLSYVGPPDSRQLTHRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...ATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp TTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: LPEESAAQVGQGEEDRTSRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...AGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR TCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTGGAAAGAGTCTGGACTaGACCTGTACCTTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: THSRPSRSETPVATGLGTGKSLD*TCTLFG
Trigger: TCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCC...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp CCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 2 (lower is better)
Translates to: PLPSLAQLGYTSHQAEVILRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...TATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GAGGGGCCCGGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 2 (lower is better)
Translates to: EGPGTYREENPWRRLCTSLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...GGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCCGGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp AGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAGTAGGGGGTCTGCACACTaGCTCAAAGGGACAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RRPCSGSARPGRTVAGYSRGSAH*LKGTSS
Trigger: GGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCT...ACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR TCA 90 bp CGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTAGGGGGTCTGCACACTaGCTCAAAGGGACAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RGWCPPRQFYHLWLLLPRRGSAH*LKGTSS
Trigger: GGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCT...ACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 2 (lower is better)
Translates to: EIKTGRGWCPPRQFYHLWHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...CCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGCATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 2 (lower is better)
Translates to: GNKDRARLVSTKAVLPLVHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...CACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTAGCCCAGTGTGCCTaGAGGAGCAGGTGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLLAQCA*RSRCEQ
Trigger: CTGCTCACACCTGCTCCTGCAGGCACACTGGGCTAG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATAGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PLPSLAQLGYTSHQAEVIGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...TATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGTCTGAGGGCCAGAGTTaGCAGTTTTACTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGSEGQS*QFYFQP
Trigger: TGGCTGGAAGTAAAACTGCCAACTCTGGCCCTCAGA...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTACAGCCACTGCCGAGACCAACGTGTGCCCTGGCCCAGTCACAGCTGGAAATCCATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: LQPLPRPTCALAQSQLEIHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...GATTTCCAGCTGTGACTGGGCCAGGGCACACGTTGGTCTCGGCAGTGGCTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CCA 90 bp GTCACAGCTGGAAATCCCAGGGCTGGTCTACACCCGACTCTGGTTTGGTTTAATCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 2 (lower is better)
Translates to: VTAGNPRAGLHPTLVWFNQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...ATTAAACCAAACCAGAGTCGGGTGTAGACCAGCCCTGGGATTTCCAGCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CCA 90 bp TTACAGCCACTGCCGAGACCAACGTGTGCCCTGGCCCAGTCACAGCTGGAAATCCAGTTCTACCACTTGTaGCTGCTCCTTCCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: LQPLPRPTCALAQSQLEIQFYHL*LLLPRP
Trigger: GGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTG...GATTTCCAGCTGTGACTGGGCCAGGGCACACGTTGGTCTCGGCAGTGGCTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR TCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGAGGAAAGAGTCTGGACTaGACCTGTACCTTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGGKSLD*TCTLFG
Trigger: TCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCC...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: GTYREENPWRRLCTSKRTHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...GGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATCCAGATCACATCCCATaGAGCAACAGAAGAAACCCA +
Preference number: 2 (lower is better)
Translates to: AGESRVPAPLAQALVRVDPDHIP*SNRRNP
Trigger: TGGGTTTCTTCTGTTGCTTCATGGGATGTGATCTGG...ATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
3UTR-3UTR GCA 90 bp GAGGGGCCCGGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCCCCTCTGCCATCTCTTaGCCAGTTGGGATACACCAG +
Preference number: 2 (lower is better)
Translates to: EGPGTYREENPWRRLCTSPSAIS*PVGIHQ
Trigger: CTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGG...GGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCCGGGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGAACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGG +
Preference number: 2 (lower is better)
Translates to: GRKSMEKALHIQAHPQGGTRGTL*HLLPSW
Trigger: CCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGT...TCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GCTGTTGGTCCCAGGGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAAGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 2 (lower is better)
Translates to: AVGPRGKESGLNLYLVWKAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...TTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTGGGACCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GTTAGCACAGGCGCTTGTACGTGTAGATGTAGGCTTTGCAGCTGGGGCATGTGTACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: VSTGACTCRCRLCSWGMCTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...ACACATGCCCCAGCTGCAAAGCCTACATCTACACGTACAAGCGCCTGTGCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR CCA 90 bp GGACAGGGTATTAGACATCCTGGGCTTCTATACCTGAGAGTTCTGAGGGCCAGAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: GQGIRHPGLLYLRVLRARRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TCTGGCCCTCAGAACTCTCAGGTATAGAAGCCCAGGATGTCTAATACCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 2 (lower is better)
Translates to: GNKDRARLVSTKAVLPLVGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...CACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAATCTGAGGGCCAGAGTTaGCAGTTTTACTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKSEGQS*QFYFQP
Trigger: TGGCTGGAAGTAAAACTGCCAACTCTGGCCCTCAGA...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp TCAGGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: SGNKDRARLVSTKAVLPLHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...AAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGCTCCAGCTTGCAGATCCCATGCGTGGATGCCATATATAGATGGTTGAAACCACTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 2 (lower is better)
Translates to: GSSLQIPCVDAIYRWLKPLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...TGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR GCA 90 bp AAGGGGGTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: KGVCTLTQRDKFLLSYQGSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...ACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGACCCTCTGCCATCTCTTaGCCAGTTGGGATACACCAG +
Preference number: 2 (lower is better)
Translates to: GRKSMEKALHIQAHPQGGPSAIS*PVGIHQ
Trigger: CTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGG...TCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp TTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTCAGCTGGGGCATGTGTaGGTCACATCCTTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: LPEESAAQVGQGEEDRTSQLGHV*VTSLKS
Trigger: TGACTTCAAGGATGTGACGCACACATGCCCCAGCTG...AGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR-3UTR GCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCATGTAGATGTAGGCTTTaGAGCTGGGGCATGTGTGCG +
Preference number: 2 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPCRCRL*SWGMCA
Trigger: CGCACACATGCCCCAGCTGCAAAGCCTACATCTACA...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGAACCTGTACCTTGTTTaGAAACAGAGGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGNLYLV*KQRHQD
Trigger: GTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTT...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTCAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: APPLAPQRRKVPRNKPRLQGERV*TEPVPC
Trigger: ACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTG...AAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: GTYREENPWRRLCTSKRTGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...GGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTATTAGACATCCTGGGCTTTCTGAGGGCCAGAGTTaGCAGTTTTACTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LTPGSSRALGQGIRHPGLSEGQS*QFYFQP
Trigger: TGGCTGGAAGTAAAACTGCCAACTCTGGCCCTCAGA...AAGCCCAGGATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGACATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: GRKSMEKALHIQAHPQGGHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...TCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp AAGGGGGTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: KGVCTLTQRDKFLLSYQGRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...ACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GGACAGGGTATTAGACATCCTGGGCTTCTATACCTGAGAGTTCTGAGGGCCAGACTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 2 (lower is better)
Translates to: GQGIRHPGLLYLRVLRARLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...TCTGGCCCTCAGAACTCTCAGGTATAGAAGCCCAGGATGTCTAATACCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTCTGATCCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 2 (lower is better)
Translates to: VCTLTQRDKFLLSYQGLIHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...GATCAGACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACATACAGTGGTCCAGGTaGGCAAGTTCACAAACCATT +
Preference number: 2 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDIQWSR*ASSQTI
Trigger: AATGGTTTGTGAACTTGCTCACCTGGACCACTGTAT...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR GCA 90 bp CCACCATGCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCTCCCAACAGAATTTTTaGCAGAAGAGTCAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: PPCPTSSTPEAQSTQKQTSQQNF*QKSQRL
Trigger: GAGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGA...GGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGCATGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GGCTCCAGCTTGCAGATCCCATGCGTGGATGCCATATATAGATGGTTGAAACCATCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: GSSLQIPCVDAIYRWLKPSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...TGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR GCA 90 bp GCTGTTGGTCCCAGGGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAAGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: AVGPRGKESGLNLYLVWKANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...TTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTGGGACCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTAACCTGTACCTTGTTTaGAAACAGAGGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGNLYLV*KQRHQD
Trigger: GTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTT...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGACAGGGTATTAGACATCCTGGGCTTCTATACCTGAGAGTTCTGAGGGCCAGATGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: GQGIRHPGLLYLRVLRARCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...TCTGGCCCTCAGAACTCTCAGGTATAGAAGCCCAGGATGTCTAATACCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: EIKTGRGWCPPRQFYHLWHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...CCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGCAGTTCTACCACTTGTaGCTGCTCCTTCCTCGTCCC +
Preference number: 2 (lower is better)
Translates to: GNKDRARLVSTKAVLPLVQFYHL*LLLPRP
Trigger: GGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTG...CACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCATCCCAACAGAATTTTTaGCAGAAGAGTCAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPSQQNF*QKSQRL
Trigger: GAGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGA...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAATCCCAACAGAATTTTTaGCAGAAGAGTCAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKSQQNF*QKSQRL
Trigger: GAGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGA...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GAAGGACAGTGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCACCATGGAGAAGGCTCTaGACATCCAAGCGCACCCAC +
Preference number: 2 (lower is better)
Translates to: EGQWQDTVVQVSKFTNHSPWRRL*TSKRTH
Trigger: GTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGG...TGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAAGGACAGTGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCATGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: EGQWQDTVVQVSKFTNHSCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...TGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAACAGAGGCATCAGGATGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: GERVWTEPVPCLETEASGCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTCTGATCGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: VCTLTQRDKFLLSYQGLIGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...GATCAGACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAAGGACAGTGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCAGGGTTCACAGAGGCATaGCCTGAAAGGGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: EGQWQDTVVQVSKFTNHSGFTEA*PERGSA
Trigger: TGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCC...TGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp TTCCTTCTTAGCTACCAGGGTCTGATCATTCACCCAGGTACAGTGTCCTCTCTACGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: FLLSYQGLIIHPGTVSSLRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...TAGAGAGGACACTGTACCTGGGTGAATGATCAGACCCTGGTAGCTAAGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp ACACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTGCCACCTCCCAACAGAATTTTTaGCAGAAGAGTCAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: THTKQTNNTQAHCQPPATSQQNF*QKSQRL
Trigger: GAGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGA...GGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp GGCTCCAGCTTGCAGATCCCATGCGTGGATGCCATATATAGATGGTTGAAACCATCTACCACTTGTGGCTaGTCCTTCCTCGTCCCTAGC +
Preference number: 2 (lower is better)
Translates to: GSSLQIPCVDAIYRWLKPSTTCG*SFLVPS
Trigger: GCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGA...TGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR GCA 90 bp AAGGGGGTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTTGTAGATGTAGGCTTTaGAGCTGGGGCATGTGTGCG +
Preference number: 2 (lower is better)
Translates to: KGVCTLTQRDKFLLSYQGCRCRL*SWGMCA
Trigger: CGCACACATGCCCCAGCTGCAAAGCCTACATCTACA...ACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
3UTR-3UTR TCA 90 bp GTCACAGCTGGAAATCCCAGGGCTGGTCTACACCCGACTCTGGTTTGGTTTAATTTAGCTACCAGGGTCTaGTCATTCACCCAGGTACAG +
Preference number: 2 (lower is better)
Translates to: VTAGNPRAGLHPTLVWFNLATRV*SFTQVQ
Trigger: CTGTACCTGGGTGAATGATCAGACCCTGGTAGCTAA...ATTAAACCAAACCAGAGTCGGGTGTAGACCAGCCCTGGGATTTCCAGCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR GCA 90 bp GAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGTCCCAACAGAATTTTTaGCAGAAGAGTCAGCGGCTC +
Preference number: 2 (lower is better)
Translates to: EIKTGRGWCPPRQFYHLWSQQNF*QKSQRL
Trigger: GAGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGA...CCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TCAGGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTCAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: SGNKDRARLVSTKAVLPLQGERV*TEPVPC
Trigger: ACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTG...AAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCAGGAAATAAAGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 2 (lower is better)
Translates to: WQDTVVQVSKFTNHSGNKGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...TTTATTTCCTGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR TCA 90 bp TGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCAGGAAATAAACTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 2 (lower is better)
Translates to: WQDTVVQVSKFTNHSGNKLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...TTTATTTCCTGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR GCA 90 bp TGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCAGGAAATAAATACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: WQDTVVQVSKFTNHSGNKYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...TTTATTTCCTGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGAACCTGTACCTTGTTTaGAAACAGAGGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: EIKTGRGWCPPRQFYHLWNLYLV*KQRHQD
Trigger: GTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTT...CCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp TTCCTTCTTAGCTACCAGGGTCTGATCATTCACCCAGGTACAGTGTCCTCTCTATCTGAGGGCCAGAGTTaGCAGTTTTACTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: FLLSYQGLIIHPGTVSSLSEGQS*QFYFQP
Trigger: TGGCTGGAAGTAAAACTGCCAACTCTGGCCCTCAGA...TAGAGAGGACACTGTACCTGGGTGAATGATCAGACCCTGGTAGCTAAGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAACAGAGGCATCAGGAAACCTGTACCTTGTTTaGAAACAGAGGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: GERVWTEPVPCLETEASGNLYLV*KQRHQD
Trigger: GTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTT...TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CCA 90 bp GAAAGGGCCAATTTAATGAGAAACTACAAACTGAGACTGGGCCACGATTCACAGCAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: ERANLMRNYKLRLGHDSQQGERV*TEPVPC
Trigger: ACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTG...CTGTGAATCGTGGCCCAGTCTCAGTTTGTAGTTTCTCATTAAATTGGCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR CCA 72 bp GTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGA +
Preference number: 3 (lower is better)
Translates to: VGQGEEDRTSRG*WHGSQPQVGAG
Trigger: TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
3UTR TCA 72 bp CACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTaGGGACACAGGGCAGACGGGAAGGGGCTAGGCTCA +
Preference number: 3 (lower is better)
Translates to: HQPPGRGHTHTQ*GHRADGKGLGS
Trigger: TGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR GCA 72 bp CTTAAGGGTGCGCCTCCCCAGGGCTGGATGATGCTGTaGTCAAGCCTGCGGGTAGGAGGGCTCCAGCTTGCA +
Preference number: 3 (lower is better)
Translates to: LKGAPPQGWMML*SSLRVGGLQLA
Trigger: TGCAAGCTGGAGCCCTCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGCACCCTTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR CCA 72 bp CAGTCTGTGTTGCTTAAGGGTGCGCCTCCCCAGGGCTaGATGATGCTGTGCTCAAGCCTGCGGGTAGGAGGG +
Preference number: 3 (lower is better)
Translates to: QSVLLKGAPPQG*MMLCSSLRVGG
Trigger: CCCTCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGCACCCTTAAGCAACACAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CAA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAVCVTS*KSLMRQ
Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
3UTR TCA 72 bp CCCAGGCTTTGTGACCCTGTCCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCATTCTCGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: PRLCDPVLRGPT*LQTTYPFSAQQ
Trigger: CTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 72 bp TGGTGTTGTCCCAGGCAGTTGGCATGGCATCAGCACTaGGGGTGTGAGACCCTGAGGACTCAGCCTCCCGTC +
Preference number: 3 (lower is better)
Translates to: WCCPRQLAWHQH*GCETLRTQPPV
Trigger: GACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTCAGTGCTGATGCCATGCCAACTGCCTGGGACAACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR GCA 72 bp TCTGCACATCCAAGCGCACCCACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGGGATACACCAGCCACC +
Preference number: 3 (lower is better)
Translates to: SAHPSAPTRGTL*HLLPSWDTPAT
Trigger: GGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGTGGGTGCGCTTGGATGTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTCCATCTCTTGCCCAGTaGGGATACACCAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: AGVHQGSSTTCGCSFLVPPSLAQ*GYTSHQ
Trigger: CTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGG...AGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCACCCTCTGCCATCTCTaGCCCAGTTGGGATACACCA +
Preference number: 3 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLATLCHL*PSWDTP
Trigger: TGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGT...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: RQRSYPHAVRTQGRREGAVCVTS*KSLMRQ
Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGACATCCTTGAAGTCATaGATGAGGCAGGGGATCAGG +
Preference number: 3 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVTSLKS*MRQGIR
Trigger: CCTGATCCCCTGCCTCATCAATGACTTCAAGGATGT...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
3UTR TCA 72 bp GAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCCCACCTGACTCCAGAC +
Preference number: 3 (lower is better)
Translates to: EAQSTQKQTQAL*PCPTWAHLTPD
Trigger: GTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 72 bp CGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTGACTCAAAGGGACAAG +
Preference number: 3 (lower is better)
Translates to: RPQQYRVHRGMA*KGVCTLTQRDK
Trigger: CTTGTCCCTTTGAGTCAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR CCA 72 bp GGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTaGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACA +
Preference number: 3 (lower is better)
Translates to: GHAVAVRDQEGQ*QDTVVQVSKFT
Trigger: TGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR-3UTR CAA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGAACCTGTACCTTGTTaGGAAACAGAGGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGEPVPC*ETEASG
Trigger: TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTC...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 72 bp TCTGATCATTCACCCAGGTACAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGGCACTGGGACAGGGTA +
Preference number: 3 (lower is better)
Translates to: SDHSPRYSVLST*HQAALGHWDRV
Trigger: TACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGGGTGAATGATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR GCA 72 bp GGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTaGACATCCAAGCGCACCCACAAGGGGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: GTYREENPWRRL*TSKRTHKGDPL
Trigger: CAGAGGGTCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR GCA 72 bp GCTGTGCTCAAGCCTGCGGGTAGGAGGGCTCCAGCTTaGAGATCCCATGCGTGGATGCCATATATAGATGGT +
Preference number: 3 (lower is better)
Translates to: AVLKPAGRRAPA*RSHAWMPYIDG
Trigger: ACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGCCCTCCTACCCGCAGGCTTGAGCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CAA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTATCCCAACAGAATTTTaGCCAGAAGAGTCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGIPTEF*PEESAA
Trigger: AGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGAT...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAAATCCCAACAGAATTTTaGCCAGAAGAGTCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKIPTEF*PEESAA
Trigger: AGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGAT...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAAGAACCTGTACCTTGTTaGGAAACAGAGGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKEPVPC*ETEASG
Trigger: TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTC...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCCATCTCTTGCCCAGTaGGGATACACCAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: GTYREENPWRRLCTSKRTPSLAQ*GYTSHQ
Trigger: CTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGG...GGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGAACCCTCTGCCATCTCTaGCCCAGTTGGGATACACCA +
Preference number: 3 (lower is better)
Translates to: GRKSMEKALHIQAHPQGGTLCHL*PSWDTP
Trigger: TGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGT...TCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR TCA 72 bp AGAAACTACAAACTGAGACTGGGCCACGATTCACAGTaGCAGGAGGCCATGCAGTGGCAGTGCGAGACCAGG +
Preference number: 3 (lower is better)
Translates to: RNYKLRLGHDSQ*QEAMQWQCETR
Trigger: CCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTCAGTTTGTAGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
3UTR CCA 72 bp AGGGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTaGAAACAGAGGCATCAGGACCCCAGCAGGAGACCC +
Preference number: 3 (lower is better)
Translates to: RGKESGLNLYLV*KQRHQDPSRRP
Trigger: GGGTCTCCTGCTGGGGTCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp TTACAGCCACTGCCGAGACCAACGTGTGCCCTGGCCCAGTCACAGCTGGAAATCATCCCAACAGAATTTTaGCCAGAAGAGTCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: LQPLPRPTCALAQSQLEIIPTEF*PEESAA
Trigger: AGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGAT...GATTTCCAGCTGTGACTGGGCCAGGGCACACGTTGGTCTCGGCAGTGGCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CAA 90 bp CCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGATCCCAACAGAATTTTaGCCAGAAGAGTCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: PEESAAQVGQGEEDRTSRIPTEF*PEESAA
Trigger: AGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGAT...CCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGACCCTCTGCCATCTCTaGCCCAGTTGGGATACACCA +
Preference number: 3 (lower is better)
Translates to: GNKDRARLVSTKAVLPLVTLCHL*PSWDTP
Trigger: TGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGT...CACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GAAATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGACCCTCTGCCATCTCTaGCCCAGTTGGGATACACCA +
Preference number: 3 (lower is better)
Translates to: EIKTGRGWCPPRQFYHLWTLCHL*PSWDTP
Trigger: TGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGT...CCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCAGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPVCVTS*KSLMRQ
Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
3UTR CCA 72 bp TGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGAGTCTaGACTGAACCTGTACCTTGTTTGGAAACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: CSGCCWSQGERV*TEPVPCLETEA
Trigger: TGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGCTTTGTGACCCTGTCCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATATCCCAACAGAATTTTaGCCAGAAGAGTCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: GFVTLSYVGPPDSRQLTHIPTEF*PEESAA
Trigger: AGCCGCTGACTCTTCTGGCAAAAATTCTGTTGGGAT...ATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGGACAGGGTCACAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp CCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATAGAACCTGTACCTTGTTaGGAAACAGAGGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: PLPSLAQLGYTSHQAEVIEPVPC*ETEASG
Trigger: TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTC...TATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGCTCCAGCTTGCAGATCCCATGCGTGGATGCCATATATAGATGGTTGAAACCACCATCTCTTGCCCAGTaGGGATACACCAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: GSSLQIPCVDAIYRWLKPPSLAQ*GYTSHQ
Trigger: CTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGG...TGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCAAGCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CAA 90 bp GAAGGACAGTGGCAGGATACAGTGGTCCAGGTGAGCAAGTTCACAAACCATTCACCATCTCTTGCCCAGTaGGGATACACCAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: EGQWQDTVVQVSKFTNHSPSLAQ*GYTSHQ
Trigger: CTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGG...TGAATGGTTTGTGAACTTGCTCACCTGGACCACTGTATCCTGCCACTGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp CGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATGTAGGCTTTGCAACATCCTTGAAGTCATaGATGAGGCAGGGGATCAGG +
Preference number: 3 (lower is better)
Translates to: RVPAPLAQALVRVDVGFATSLKS*MRQGIR
Trigger: CCTGATCCCCTGCCTCATCAATGACTTCAAGGATGT...TGCAAAGCCTACATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
3UTR TCA 72 bp CTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTCTaGTCATTCACCCAGGTACAGTGTCCTCTCTACCTG +
Preference number: 3 (lower is better)
Translates to: LKGTSSFLATRV*SFTQVQCPLYL
Trigger: CAGGTAGAGAGGACACTGTACCTGGGTGAATGATCAGACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR CCA 72 bp CAGCTGGAAATCCCAGGGCTGGTCTACACCCGACTCTaGTTTGGTTTAATTAGGTCCTTACGTGTTGGTGTT +
Preference number: 3 (lower is better)
Translates to: QLEIPGLVYTRL*FGLIRSLRVGV
Trigger: AACACCAACACGTAAGGACCTAATTAAACCAAACCAGAGTCGGGTGTAGACCAGCCCTGGGATTTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
3UTR-3UTR CAA 90 bp GTCTGCACACTGACTCAAAGGGACAAGTTCCTTCTTAGCTACCAGGGTCTGATCGAACCTGTACCTTGTTaGGAAACAGAGGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: VCTLTQRDKFLLSYQGLIEPVPC*ETEASG
Trigger: TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTC...GATCAGACCCTGGTAGCTAAGAAGGAACTTGTCCCTTTGAGTCAGTGTGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR-3UTR CAA 90 bp GGGGAAAGAGTCTGGACTGAACCTGTACCTTGTTTGGAAACAGAGGCATCAGGAGAACCTGTACCTTGTTaGGAAACAGAGGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: GERVWTEPVPCLETEASGEPVPC*ETEASG
Trigger: TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTC...TCCTGATGCCTCTGTTTCCAAACAAGGTACAGGTTCAGTCCAGACTCTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
3UTR TCA 72 bp TGCAGATCCCATGCGTGGATGCCATATATAGATGGTTaGAACCAGCATCAGAGGAAGGAAGGTGACCTTACA +
Preference number: 3 (lower is better)
Translates to: CRSHAWMPYIDG*NQHQRKEGDLT
Trigger: TGTAAGGTCACCTTCCTTCCTCTGATGCTGGTTTCAACCATCTATATATGGCATCCACGCATGGGATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR TCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR TCA 90 bp AAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: KAQGARLTGGGVPSPSSVHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...AACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGATGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QSTGGQTDRRGSPESQLRRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...ACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCACACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KAQGARLTGGGVPSPSSVRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...AACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCTGGCGTGTAGGGCCCTaGGGGGTAGTAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSWRVGP*GVVAHG
Trigger: CCCATGGGCTACTACCCCCCAGGGCCCTACACGCCA...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR TCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWEREACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCCTCCCCAGGGCTGGATaGTGCTGTGCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSLPRAG*CCAQAC
Trigger: GCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAG...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTCCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLGDGGTAPSPKWERESRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...ACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWEREGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGTGGCGTGTAGGGCCCTaGGGGGTAGTAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREWRVGP*GVVAHG
Trigger: CCCATGGGCTACTACCCCCCAGGGCCCTACACGCCA...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCGTGGTGGCAGCTCCTaGAGGGACCAGGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDRGGSS*RDQDCG
Trigger: GCCACAGTCCTGGTCCCTTCAGGAGCTGCCACCACG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR TCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGALVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR GCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTCTAGCCCAGTGTGCCTaGAGGAGCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGALAQCA*RSRCEQ
Trigger: CTGCTCACACCTGCTCCTGCAGGCACACTGGGCTAG...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGGCCGAGACCAACGTGTaGCCTGGCCCAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEAETNV*PGPVTA
Trigger: AGCTGTGACTGGGCCAGGGCACACGTTGGTCTCGGC...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYREGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGCCAGGCTGGGGCATTaGGTGACCCGGCGGCTCATA +
Preference number: 4 (lower is better)
Translates to: GLLGDGGTAPSPKWERESARLGH*VTRRLI
Trigger: TATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGC...ACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTGCACTGTCACCGTGGTaGCAGCTCCTGAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QSTGGQTDRRGSPESQLRALSPW*QLLKGP
Trigger: TGGTCCCTTCAGGAGCTGCCACCACGGTGACAGTGC...ACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCATGGCCTGCTGGCAGTaGGGACACACCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLMACWQ*GHTVCT
Trigger: TGTGCAGACGGTGTGTCCCCACTGCCAGCAGGCCAT...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTATGGCCTGCTGGCAGTaGGGACACACCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAMACWQ*GHTVCT
Trigger: TGTGCAGACGGTGTGTCCCCACTGCCAGCAGGCCAT...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTGAGAAGGGAGGCAGGTaGGGCTCCTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTEKGGR*GSFSCW
Trigger: CCAGCAGCTGAAGGAGCCTCACCTGCCTCCCTTCTC...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCCGTGGTGGCAGCTCCTaGAGGGACCAGGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGRGGSS*RDQDCG
Trigger: GCCACAGTCCTGGTCCCTTCAGGAGCTGCCACCACG...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR TCA 90 bp CCCAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: PSRRPLPAYLPDHTHQADHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLAHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTATTAGACATCCTGGGCTTCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: LTPGSSRALGQGIRHPGLHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...AAGCCCAGGATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGACAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAAGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCCCCAGGGCGGGGGAGTaGAAGGGCCAATTTAATGAG +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSPRAGE*KGQFNE
Trigger: CTCATTAAATTGGCCCTTTCACTCCCCCGCCCTGGG...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCTCCCCAGGGCTGGATaGTGCTGTGCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDLPRAG*CCAQAC
Trigger: GCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTCCATGGAGAAGGCTCTaGACATCCAAGCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: QSTGGQTDRRGSPESQLRPWRRL*TSKRTH
Trigger: GTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGG...ACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCTAGCCCAGTGTGCCTaGAGGAGCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPLAQCA*RSRCEQ
Trigger: CTGCTCACACCTGCTCCTGCAGGCACACTGGGCTAG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTGCCGAGACCAACGTGTaGCCTGGCCCAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTAETNV*PGPVTA
Trigger: AGCTGTGACTGGGCCAGGGCACACGTTGGTCTCGGC...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCAGCCCAGTCTGTGTTaGTTAAGGGTGCGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEQPSLC*LRVRLP
Trigger: GGGGAGGCGCACCCTTAAGCAACACAGACTGGGCTG...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGGCTCCTTCAGCTGCTaGCCTGGATGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPGSFSC*PGWTGN
Trigger: GTTCCCTGTCCATCCAGGCCAGCAGCTGAAGGAGCC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KAQGARLTGGGVPSPSSVFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...AACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR CCA 90 bp CCACCATGCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PPCPTSSTPEAQSTQKQTWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...GGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGCATGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp AGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGGCCAGGCTGGGGCATTaGGTGACCCGGCGGCTCATA +
Preference number: 4 (lower is better)
Translates to: RVKRTGLLGDGGTAPSPKARLGH*VTRRLI
Trigger: TATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGC...CTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGCCAGGCTGGGGCATTaGGTGACCCGGCGGCTCATA +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGARLGH*VTRRLI
Trigger: TATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGC...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGTGGCGTGTAGGGCCCTaGGGGGTAGTAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGWRVGP*GVVAHG
Trigger: CCCATGGGCTACTACCCCCCAGGGCCCTACACGCCA...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGAGTCTGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTNWLTALAAVGPRGKESARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...AGACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GAGGGGCCCGGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGPGTYREENPWRRLCTSARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...GGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCCGGGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGATGGCCTGCTGGCAGTaGGGACACACCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEMACWQ*GHTVCT
Trigger: TGTGCAGACGGTGTGTCCCCACTGCCAGCAGGCCAT...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GLLGDGGTAPSPKWERESAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...ACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKAQGARLTGGGVPSPSSGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...GGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTGGGTTCACAGAGGCATaGCCTGAAAGGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QSTGGQTDRRGSPESQLRGFTEA*PERGSA
Trigger: TGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCC...ACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
CDS-3UTR CCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: AGESRVPAPLAQALVRVDQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...ATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAGGAGGCCATGCAGTaGCAGTGCGAGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPQEAMQ*QCETRK
Trigger: CTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACGCGCCTCCCCAGGGCTaGATGATGCTGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDAPPQG*MMLCSS
Trigger: GCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGC...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGGAACGCCTCGGCAGCTaGCAGTCGCACTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREERLGS*QSHFCH
Trigger: GTGACAGAAGTGCGACTGCCAGCTGCCGAGGCGTTC...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563507.5
ENST00000564828.5
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGCAGCACTGTCACCGTaGTGGCAGCTCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGAALSP*WQLPEA
Trigger: TGCCTCCGGGAGCTGCCACCACGGTGACAGTGCTGC...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563507.5
ENST00000633324.1
CDS-3UTR TCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAACTGAGCTCCCATGCATaGGGACTGGACTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWERELSSHA*GLDCQA
Trigger: TGCCTGGCAGTCCAGTCCTCATGCATGGGAGCTCAG...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR TCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGAGTCTCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GTNWLTALAAVGPRGKESHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...AGACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCAAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEASVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCAGGGGGTCTGCACACTaGCTCAAAGGGACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLRGSAH*LKGTSS
Trigger: GGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCT...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAACACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYREHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGAGGGTGTGAGACCCTaGGGACTCAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTEGVRP*GLSLPS
Trigger: GGACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTC...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAATCAGCACTGAGGGTGTaGGACCCTGAGGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWERESALRV*DPEDSA
Trigger: GGCTGAGTCCTCAGGGTCTCACACCCTCAGTGCTGA...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGACTCCCCAGGGCTGGATaGTGCTGTGCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGLPRAG*CCAQAC
Trigger: GCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAG...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp AAGGGGGACCCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGTCCCGTCGCAGGTCTaGTTCCTCCCTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGDPLPSLAQLGYTSHQAVPSQV*FLPPPG
Trigger: TCCTGGGGGAGGGAGGAAGCAGACCTGCGACGGGAC...TGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR GCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWEREMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAATTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWERELVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGTACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCCCTCTGCCATCTCTTaGCCAGTTGGGATACACCAG +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLPSAIS*PVGIHQ
Trigger: CTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGG...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPTRGTL*HLLPSW
Trigger: CCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGT...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGCCATGCAGTGGCAGTaGGAGACCAGGAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPAMQWQ*ETRKDS
Trigger: ACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR GCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCCCAGAACCTGCGTGTaGAGACTGCGCTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLPRTCV*RLRSVS
Trigger: ACTAACAGAGCGCAGTCTGCACACGCAGGTTCTGGG...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCGCTCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGAPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGAGC...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562334.5
ENST00000631859.1
CDS-3UTR GCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGGCTCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWEAPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGAGC...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562334.5
ENST00000631859.1
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGCTGGGCCCAGGGGCCTaGGCATACCACACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRLGPGA*AYHTVP
Trigger: AGGAACTGTGTGGTATGCCCAGGCCCCTGGGCCCAG...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCTTCAGCTGCTGGCCTaGATGGACAGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPLQLLA*MDREQA
Trigger: TGCCTGTTCCCTGTCCATCCAGGCCAGCAGCTGAAG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGGCTCCTTCAGCTGCTaGCCTGGATGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLLGDGGTAPSPKWERESGSFSC*PGWTGN
Trigger: GTTCCCTGTCCATCCAGGCCAGCAGCTGAAGGAGCC...ACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWEREEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGCCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWEPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp TCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: SAAQVGQGEEDRTSRGWWGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...CCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLARRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CCCAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PSRRPLPAYLPDHTHQADRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...GTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: APPLAPQRRKVPRNKPRLRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...AAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGAGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CCCAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSRRPLPAYLPDHTHQADGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...GTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACTGGCGTGTAGGGCCCTaGGGGGTAGTAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYWRVGP*GVVAHG
Trigger: CCCATGGGCTACTACCCCCCAGGGCCCTACACGCCA...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCAGCACTGTCACCGTGGTaGCAGCTCCTGAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAALSPW*QLLKGP
Trigger: TGGTCCCTTCAGGAGCTGCCACCACGGTGACAGTGC...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACGCAGCACTGTCACCGTaGTGGCAGCTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDAALSP*WQLLKG
Trigger: TCCCTTCAGGAGCTGCCACCACGGTGACAGTGCTGC...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHRECSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGGGGTTCACAGAGGCATaGCCTGAAAGGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEGFTEA*PERGSA
Trigger: TGCAGACCCCCTTTCAGGCCATGCCTCTGTGAACCC...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCCATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCAGAACGCCTCGGCAGCTaGCAGTCGCACTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAERLGS*QSHFCH
Trigger: GTGACAGAAGTGCGACTGCCAGCTGCCGAGGCGTTC...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564828.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGCTGAGCTCCCATGCATaGGGACTGGACTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGLSSHA*GLDCQA
Trigger: TGCCTGGCAGTCCAGTCCTCATGCATGGGAGCTCAG...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR TCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTGAGAAGGGAGGCAGGTaGGGCTCCTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGEKGGR*GSFSCW
Trigger: CCAGCAGCTGAAGGAGCCTCACCTGCCTCCCTTCTC...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGAGGAGATCTTGGTGGTaGTGGCCTGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRRRSWW*WPAGSG
Trigger: CCCACTGCCAGCAGGCCATCACCACCAAGATCTCCT...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCAGGAGATCTTGGTGGTaGTGGCCTGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGRRSWW*WPAGSG
Trigger: CCCACTGCCAGCAGGCCATCACCACCAAGATCTCCT...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR TCA 90 bp ATAAAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCACAGGGGGCCAGACTaGCAGGCGGGGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: IKTGRGWCPPRQFYHLWLHRGPD*QAGESR
Trigger: TCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTG...CAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAACGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYRERESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAACTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYRELRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAACAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGAGGGGGTCTGCACACTaGCTCAAAGGGACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTERGSAH*LKGTSS
Trigger: GGAACTTGTCCCTTTGAGTCAGTGTGCAGACCCCCT...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGCACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp TTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACACAGAGGCATGGCCTaGAAGGGGGTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: LPILGPAGQKRLWPQAWGHRGMA*KGVCTL
Trigger: CAGTGTGCAGACCCCCTTTCAGGCCATGCCTCTGTG...TCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp AAGGGGGACCCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCACATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: KGDPLPSLAQLGYTSHQAHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...TGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTCATACCCACACGCAGTaGGGACACAGGGCAGACGGG +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGHTHTQ*GHRADG
Trigger: CCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATG...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCAGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: QQETPPSLSSRSHTPSRPACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...TGGTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTCTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGGCCACGATTCACAGTaGCAGGAGGCCATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQGHDSQ*QEAMQW
Trigger: CCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCC...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCCACGATTCACAGTaGCAGGAGGCCATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRGHDSQ*QEAMQW
Trigger: CCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCC...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCGAGGGTGTGAGACCCTaGGGACTCAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLEGVRP*GLSLPS
Trigger: GGACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTC...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGCATGGCATCAGCACTaGGGGTGTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQAWHQH*GCETLR
Trigger: CCTCAGGGTCTCACACCCTCAGTGCTGATGCCATGC...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGCTCCCCAGGGCTGGATaGTGCTGTGCTCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRLPRAG*CCAQAC
Trigger: GCAGGCTTGAGCACAGCATCATCCAGCCCTGGGGAG...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAATCCCTCCCCCAGGACTaGTGGCACCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKSLPQD*WHPRAT
Trigger: CGTGGCCCTTGGGTGCCAGCAGTCCTGGGGGAGGGA...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR GCA 90 bp GCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AGESRVPAPLAQALVRVDMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...ATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGCCGGAGGCATGTAGGTaGCATCTGCACTCATGTGTG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREPEACR*HLHSCV
Trigger: CACACATGAGTGCAGATGGCACCTACATGCCTCCGG...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCCGGAGGCATGTAGGTaGCATCTGCACTCATGTGTG +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPPEACR*HLHSCV
Trigger: CACACATGAGTGCAGATGGCACCTACATGCCTCCGG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGATGGGGACACACCGTCTaGACAGGCGCTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGWGHTV*TGAPSK
Trigger: CTTTGAGGGAGCGCCTGTGCAGACGGTGTGTCCCCA...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGATTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGLVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGLVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCAGCTGGGGCATGTGTaGGTCACATCCTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLQLGHV*VTSLKS
Trigger: TGACTTCAAGGATGTGACGCACACATGCCCCAGCTG...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RQRSYPHAVRTQGRREGASLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp AGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTCATTGTCAGCCCCCTaGCACCCACTGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RVKRTGLLGDGGTAPSPKSLSAP*HPLTLG
Trigger: GCCAAGGGTCAGTGGGTGGCAGGGGGCTGACAATGA...CTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GGGCTAGGCTCAGGGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: GLGSGAPSGPSNTGFTEAYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...TGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCCCTGAGCCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGACCCTCTGCCATCTCTTaGCCAGTTGGGATACACCAG +
Preference number: 4 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGPSAIS*PVGIHQ
Trigger: CTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGG...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDTRGTL*HLLPSW
Trigger: CCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGT...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTCCATGGAGAAGGCTCTaGACATCCAAGCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTPWRRL*TSKRTH
Trigger: GTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGG...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTGCCATGCAGTGGCAGTaGGAGACCAGGAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTAMQWQ*ETRKDS
Trigger: ACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGC...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGCTCCTTCAGCTGCTaGCCTGGATGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGGSFSC*PGWTGN
Trigger: GTTCCCTGTCCATCCAGGCCAGCAGCTGAAGGAGCC...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGGCTCCTTCAGCTGCTaGCCTGGATGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGGSFSC*PGWTGN
Trigger: GTTCCCTGTCCATCCAGGCCAGCAGCTGAAGGAGCC...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTCCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGTCCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPAPAIQGSQRHGLKGGPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...ACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp TTTTTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: FLPEESAAQVGQGEEDRTWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...AGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp ACACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTGCCACCTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: THTKQTNNTQAHCQPPATWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...GGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTATTAGACATCCTGGGCTTGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LTPGSSRALGQGIRHPGLGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...AAGCCCAGGATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp CCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PEESAAQVGQGEEDRTSRGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...CCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGAGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGAGCCAGGCTGGGGCATTaGGTGACCCGGCGGCTCATA +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGARLGH*VTRRLI
Trigger: TATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGC...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTATCTGCACTCATGTGTaGTGGGATGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARLTGGGVPSPSSVSTGAICTHV*WDEARL
Trigger: CAGCCTGGCTTCATCCCACCACACATGAGTGCAGAT...AGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCAGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQETPPSLSSRSHTPSRPGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...TGGTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATAGGGGGTAGTAGCCCATaGGTGGGTGGGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLPSLAQLGYTSHQAEVIGGSSP*VGGGLE
Trigger: CTCCAGGCCCCCACCCACCCATGGGCTACTACCCCC...TATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCTGGCGTGTAGGGCCCTaGGGGGTAGTAGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLWRVGP*GVVAHG
Trigger: CCCATGGGCTACTACCCCCCAGGGCCCTACACGCCA...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTYREENPWRRLCTSKRTARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...GGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGAAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGCACTGTCACCGTGGTaGCAGCTCCTGAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQALSPW*QLLKGP
Trigger: TGGTCCCTTCAGGAGCTGCCACCACGGTGACAGTGC...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGGCACTGTCACCGTGGTaGCAGCTCCTGAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWEALSPW*QLLKGP
Trigger: TGGTCCCTTCAGGAGCTGCCACCACGGTGACAGTGC...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTGCAGCACTGTCACCGTaGTGGCAGCTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RQRSYPHAVRTQGRREGAAALSP*WQLLKG
Trigger: TCCCTTCAGGAGCTGCCACCACGGTGACAGTGCTGC...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCGCAGCACTGTCACCGTaGTGGCAGCTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGAALSP*WQLLKG
Trigger: TCCCTTCAGGAGCTGCCACCACGGTGACAGTGCTGC...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000634209.1
CDS-3UTR CCA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTATGGCCTGCTGGCAGTaGGGACACACCGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RQRSYPHAVRTQGRREGAMACWQ*GHTVCT
Trigger: TGTGCAGACGGTGTGTCCCCACTGCCAGCAGGCCAT...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGTVSSLPDTRQLSGTGTRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...TGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp ACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGGACTTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: THSRPSRSETPVATGLGTCSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...AGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGDGGTAPSPKWERESGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...ACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp AGGCAGAGGTCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: RQRSYPHAVRTQGRREGAGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...AGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGGCAGCTCTCGGGCACTaGGACAGGGTATTAGACATC +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTEAALGH*DRVLDI
Trigger: GATGTCTAATACCCTGTCCCAGTGCCCGAGAGCTGC...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCATCTCTTGCCCAGTTaGGATACACCAGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQGEEDRTSRGWWHGSQPHLLPS*DTPATR
Trigger: CCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATG...GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTCCCTAGCCCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: VSTKAVLPLVAAPSSSLAQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...GGCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CCCAGCAGGAGACCCCTCCCAGCTTATCTTCCCGATCACACACACCAAGCAGACCAACAGCCTGTCAGCTaGGGTGAGGGGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: PSRRPLPAYLPDHTHQADQQPVS*GEGPGT
Trigger: AGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTG...GTCTGCTTGGTGTGTGTGATCGGGAAGATAAGCTGGGAGGGGTCTCCTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAACAGGAGGCCATGCAGTaGCAGTGCGAGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGEEDRTSRGWWHGSQPQQEAMQ*QCETRK
Trigger: CTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTG...TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCCAGGAGGCCATGCAGTaGCAGTGCGAGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGQEAMQ*QCETRK
Trigger: CTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTG...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACGACCAACGTGTGCCCTaGCCCAGTCACAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDDQRVP*PSHSWK
Trigger: TTTCCAGCTGTGACTGGGCCAGGGCACACGTTGGTC...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTGCGCCTCCCCAGGGCTaGATGATGCTGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGAPPQG*MMLCSS
Trigger: GCTTGAGCACAGCATCATCCAGCCCTGGGGAGGCGC...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR CCA 90 bp GCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTGCAGCACTGTCACCGTaGTGGCAGCTCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: APPLAPQRRKVPRNKPRLAALSP*WQLPEA
Trigger: TGCCTCCGGGAGCTGCCACCACGGTGACAGTGCTGC...AAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563507.5
ENST00000633324.1
CDS-3UTR TCA 90 bp GACAGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAGGAGATCTTGGTGGTaGTGGCCTGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DRRPCSGSARPGRTVAGYRRSWW*WPAGSG
Trigger: CCCACTGCCAGCAGGCCATCACCACCAAGATCTCCT...GTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp CTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGTAGGAGATCTTGGTGGTaGTGGCCTGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPAPAIQGSQRHGLKGGRRSWW*WPAGSG
Trigger: CCCACTGCCAGCAGGCCATCACCACCAAGATCTCCT...ACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR TCA 90 bp AGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGCGGGAAAGTGACCACTaGGCACAGGGAGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RVKRTGLLGDGGTAPSPKRESDH*AQGAKH
Trigger: GTGCTTTGCTCCCTGTGCTCAGTGGTCACTTTCCCG...CTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR TCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGACTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWELRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGCTACGTGGGCCCACCTaGCTCCAGACAACTTACCCA +
Preference number: 4 (lower is better)
Translates to: GEEDRTSRGWWHGSQPQVLRGPT*LQTTYP
Trigger: TGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAG...CACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGTCAAACCCAGGCTTTGTaGCCCTGTCCTACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPAPAIQGSQRHGLKGGQTQAL*PCPTWA
Trigger: GGCCCACGTAGGACAGGGTCACAAAGCCTGGGTTTG...ACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACAGTGTCCTCTCTACCTaGCACCAGGCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDSVLST*HQAALG
Trigger: CCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACT...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp CGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATGTAGGCTTTGCAGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: RVPAPLAQALVRVDVGFAACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...TGCAAAGCCTACATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564828.5
ENST00000633395.1
CDS-3UTR TCA 90 bp ACACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTGCCACCGCCTGTCAGCTGGGGTaGGGGGCCCGGCACTTACAG +
Preference number: 4 (lower is better)
Translates to: THTKQTNNTQAHCQPPATACQLG*GARHLQ
Trigger: CTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGC...GGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp AAGACAGGGCGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTGCAGGAGCAGGTGTaGGCAGGCACAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: KTGRGWCPPRQFYHLWLLLQEQV*AGTATA
Trigger: GGCTGTTGCTGTGCCTGCTCACACCTGCTCCTGCAG...GAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCGCCCTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR TCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGCCACGATTCACAGTaGCAGGAGGCCATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQGHDSQ*QEAMQW
Trigger: CCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCC...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR TCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCAGAGGGTGTGAGACCCTaGGGACTCAGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPEGVRP*GLSLPS
Trigger: GGACGGGAGGCTGAGTCCTCAGGGTCTCACACCCTC...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp AAGGGGGACCCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCATCAGCACTGAGGGTGTaGGACCCTGAGGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: KGDPLPSLAQLGYTSHQASALRV*DPEDSA
Trigger: GGCTGAGTCCTCAGGGTCTCACACCCTCAGTGCTGA...TGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR TCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTGCATGGCATCAGCACTaGGGGTGTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGAWHQH*GCETLR
Trigger: CCTCAGGGTCTCACACCCTCAGTGCTGATGCCATGC...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp CCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGGGCTCCTTCTCCTCAAATCCGTaGTACTCAGAGAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PHAVRTQGRREGARLRGSFSSNP*YSEKGG
Trigger: GCCTCCCTTCTCTGAGTAGCACGGATTTGAGGAGAA...GGAGCCCCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR GCA 90 bp GAGCAAAGCACAGGGGGCCAGACTGACAGGCGGGGGAGTCCCGAGTCCCAGCTCTTCTCCTCAAATCCGTaGTACTCAGAGAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EQSTGGQTDRRGSPESQLFSSNP*YSEKGG
Trigger: GCCTCCCTTCTCTGAGTAGCACGGATTTGAGGAGAA...GAGCTGGGACTCGGGACTCCCCCGCCTGTCAGTCTGGCCCCCTGTGCTTTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAGCTGGACATCTTCGCTaGTTCTCCTCAAATCCGTGC +
Preference number: 4 (lower is better)
Translates to: DRTSRGWWHGSQPQVGAGAGHLR*FSSNPC
Trigger: GCACGGATTTGAGGAGAAGCAGCGAAGATGTCCAGC...TCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGTATGCCTGGAGGGGGCTaGATCACAGCTGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLPAPAIQGSQRHGLKGGMPGGG*ITAGEE
Trigger: TTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCAT...ACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAACCGGAGGCATGTAGGTaGCATCTGCACTCATGTGTG +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYREPEACR*HLHSCV
Trigger: CACACATGAGTGCAGATGGCACCTACATGCCTCCGG...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp ACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAACCGGAGGCATGTAGGTaGCATCTGCACTCATGTGTG +
Preference number: 4 (lower is better)
Translates to: TGLLGDGGTAPSPKWEREPEACR*HLHSCV
Trigger: CACACATGAGTGCAGATGGCACCTACATGCCTCCGG...TTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGTCAAAGATCTCTCCCTaGAGCACTGTCACCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHRESKISP*STVTVV
Trigger: CACCACGGTGACAGTGCTGCAGGGAGAGATCTTTGA...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAATGGGGACACACCGTCTaGACAGGCGCTCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKWGHTV*TGAPSK
Trigger: CTTTGAGGGAGCGCCTGTGCAGACGGTGTGTCCCCA...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR GCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTTTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGLVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR GCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGTTGGTGGTGATGGCCTaGTGGCAGTGGGGACACACC +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQLVVMA*WQWGHT
Trigger: GGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAA...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR GCA 90 bp GGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGTGTAGATGTAGGCTTTaGAGCTGGGGCATGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GMVARLPAPSGSGKVTTECRCRL*SWGMCA
Trigger: CGCACACATGCCCCAGCTGCAAAGCCTACATCTACA...CTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR GCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGCTAACTGCTCTGGCTaGTGTTGGTCCCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGANCSG*CWSQGE
Trigger: TTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGC...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGTACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR GCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGTACTTCCAGCCACCATaGCCCACCTCTAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRYFQPP*PTSSTP
Trigger: TGGGGTGCTAGAGGTGGGGCATGGTGGCTGGAAGTA...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCCCTCTGCCATCTCTTaGCCAGTTGGGATACACCAG +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDPSAIS*PVGIHQ
Trigger: CTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGG...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGACAAGGGGGACCCTCTaGCATCTCTTGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRTRGTL*HLLPSW
Trigger: CCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTTGT...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GAGACTGGGCCACGATTCACAGTGACAGGAGGCCATGCAGTGGCAGTGCGAGACCTAGCCCAGTGTGCCTaGAGGAGCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ETGPRFTVTGGHAVAVRDLAQCA*RSRCEQ
Trigger: CTGCTCACACCTGCTCCTGCAGGCACACTGGGCTAG...GTCTCGCACTGCCACTGCATGGCCTCCTGTCACTGTGAATCGTGGCCCAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR GCA 90 bp CAGGCACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAATCTACCACTTGTGGCTaGTCCTTCCTCGTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QAQQQPVSWGEGPGTYRESTTCG*SFLVPS
Trigger: GCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGA...TTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp CTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACTCTACCACTTGTGGCTaGTCCTTCCTCGTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: LLGDGGTAPSPKWERESDSTTCG*SFLVPS
Trigger: GCTAGGGACGAGGAAGGAGCAGCCACAAGTGGTAGA...GTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR GCA 90 bp GCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCGGCTGGATGATGCTGTaGTCAAGCCTGCGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: AQVGQGEEDRTSRGWWHGGWMML*SSLRVG
Trigger: TCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCC...GCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGGCTGGATGATGCTGTaGTCAAGCCTGCGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGGWMML*SSLRVG
Trigger: TCCTACCCGCAGGCTTGAGCACAGCATCATCCAGCC...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp AAGGGGGACCCTCTGCCATCTCTTGCCCAGTTGGGATACACCAGCCACCAGGCAAGGTCGCCCAGAACCTaGGTGTGCAGACTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: KGDPLPSLAQLGYTSHQARSPRT*VCRLRS
Trigger: AGAGCGCAGTCTGCACACGCAGGTTCTGGGCGACCT...TGCCTGGTGGCTGGTGTATCCCAACTGGGCAAGAGATGGCAGAGGGTCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
CDS-3UTR GCA 90 bp GGAAGAAAATCCATGGAGAAGGCTCTGCACATCCAAGCGCACCCACAAGGGGGAAGCCCCGCGCGGCTTTaGGCGCACAACGAAACCCCC +
Preference number: 4 (lower is better)
Translates to: GRKSMEKALHIQAHPQGGSPARL*AHNETP
Trigger: GGGGGTTTCGTTGTGCGCGCAAAGCCGCGCGGGGCT...TCCCCCTTGTGGGTGCGCTTGGATGTGCAGAGCCTTCTCCATGGATTTTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563332.6
CDS-3UTR GCA 90 bp ACAGAATTTTTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACGCTCCAGAAGCCCGGTaGCCGAGGCCGGCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: TEFLPEESAAQVGQGEEDAPEAR*PRPAES
Trigger: GCTTTCGGCCGGCCTCGGGCACCGGGCTTCTGGAGC...GTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAAAAATTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563332.6
CDS-3UTR CCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGCCCATGCATGAGGACTaGACTGCCAGGCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWEPMHED*TARQAV
Trigger: CACAGCTTGCCTGGCAGTCCAGTCCTCATGCATGGG...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399599.7
ENST00000611166.2
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGCTTCAGCTGCTGGCCTaGATGGACAGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRLQLLA*MDREQA
Trigger: TGCCTGTTCCCTGTCCATCCAGGCCAGCAGCTGAAG...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGCTTCAGCTGCTGGCCTaGATGGACAGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGLQLLA*MDREQA
Trigger: TGCCTGTTCCCTGTCCATCCAGGCCAGCAGCTGAAG...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp AGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGCTTCAGCTGCTGGCCTaGATGGACAGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: RVKRTGLLGDGGTAPSPKLQLLA*MDREQA
Trigger: TGCCTGTTCCCTGTCCATCCAGGCCAGCAGCTGAAG...CTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGGGTGGCTCCTTCAGCTGCTaGCCTGGATGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLPAPAIQGSQRHGLKGGGSFSC*PGWTGN
Trigger: GTTCCCTGTCCATCCAGGCCAGCAGCTGAAGGAGCC...ACCCCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTGAGGGGGAGGCTCGCTaGACATCTTCGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VQCPLYLTPGSSRALGQGEGEAR*TSSLLL
Trigger: GAGAAGCAGCGAAGATGTCCAGCGAGCCTCCCCCTC...ACCCTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGACCAGAAGTGGGGCTGTaGGGCCCCCAGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGPEVGL*GPQDKE
Trigger: CTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGG...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAATTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp TCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGATGGTGGTTTCTCTTCCAGAAGTaGGGCTGTGGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SAAQVGQGEEDRTSRGWWFLFQK*GCGAPR
Trigger: CCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAA...CCACCATCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp TTAGCACAGGCGCTTGTACGTGTAGATGTAGGCTTTGCAGCTGGGGCATGTGTGTGGGGAGGAACGGCCTaGGGTGGGCGGGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LAQALVRVDVGFAAGACVWGGTA*GGRGST
Trigger: AGTGGAGCCCCGCCCACCCCAGGCCGTTCCTCCCCA...CACACATGCCCCAGCTGCAAAGCCTACATCTACACGTACAAGCGCCTGTGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589159.5
ENST00000634209.1
CDS-3UTR CCA 90 bp TTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPEESAAQVGQGEEDRTSGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...AGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCAGGGCTGCATCACAGCTaGGGAGGAACGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPGLHHS*GGTAWG
Trigger: ACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCC...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
CDS-3UTR CCA 90 bp GAGGGGCCCGGCACTTACAGGGAAGAAAATCCATGGAGAAGGCTCTGCACATCCGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: EGPGTYREENPWRRLCTSGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...GGATGTGCAGAGCCTTCTCCATGGATTTTCTTCCCTGTAAGTGCCGGGCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAAGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CACACACCAAGCAGACCAACAACACACAAGCTCATTGTCAGCCCCCTGCCACCCGGGCAGTGGCATGCCTaGAGGGGGCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: HTPSRPTTHKLIVSPLPPGQWHA*RGLHHS
Trigger: GCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCC...GGGTGGCAGGGGGCTGACAATGAGCTTGTGTGTTGTTGGTCTGCTTGGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp TTTTTGCCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTCGGCGGCTCATAGGGTaGGGGGCCAATGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLPEESAAQVGQGEEDRTRRLIG*GANVRR
Trigger: CCTGCGGACATTGGCCCCCCACCCTATGAGCCGCCG...AGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGGCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCAGCCAGGCTGGGGCATTaGGTGACCCGGCGGCTCATA +
Preference number: 4 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPARLGH*VTRRLI
Trigger: TATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGC...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp ACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCACAGGCCTGGGTGCACTCATGTGTGGTaGGATGAAGCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TYPFSAQQVRNACGHRPGCTHVW*DEARLG
Trigger: CCCCAGCCTGGCTTCATCCCACCACACATGAGTGCA...CCCAGGCCTGTGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGATGCACTCATGTGTGGTaGGATGAAGCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGCTHVW*DEARLG
Trigger: CCCCAGCCTGGCTTCATCCCACCACACATGAGTGCA...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp TCATACCCACACGCAGTGAGGACACAGGGCAGACGGGAAGGGGCTAGGCTCAGGTGCACTCATGTGTGGTaGGATGAAGCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SYPHAVRTQGRREGARLRCTHVW*DEARLG
Trigger: CCCCAGCCTGGCTTCATCCCACCACACATGAGTGCA...CCTGAGCCTAGCCCCTTCCCGTCTGCCCTGTGTCCTCACTGCGTGTGGGTATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGGCTCCTTCCGGCCCCAGCAATACAGGGTTCACAGAGGCATGGCCTGAAAGGGTGCACTCATGTGTGGTaGGATGAAGCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLPAPAIQGSQRHGLKGCTHVW*DEARLG
Trigger: CCCCAGCCTGGCTTCATCCCACCACACATGAGTGCA...CCCTTTCAGGCCATGCCTCTGTGAACCCTGTATTGCTGGGGCCGGAAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GCACGGCTCCCAGCCCCAAGTGGGAGCGGGAAAGTGACCACTGAGCACAGGGAGATCTGCACTCATGTGTaGTGGGATGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARLPAPSGSGKVTTEHREICTHV*WDEARL
Trigger: CAGCCTGGCTTCATCCCACCACACATGAGTGCAGAT...CTCCCTGTGCTCAGTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GGACAGGGTATTAGACATCCTGGGCTTCTATACCTGAGAGTTCTGAGGGCCAGAGCCAGGGTAGGGCCCTaGCGTGTAGGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQGIRHPGLLYLRVLRARARVGP*RVGPWG
Trigger: CCCCCAGGGCCCTACACGCCAGGGCCCTACCCTGGC...TCTGGCCCTCAGAACTCTCAGGTATAGAAGCCCAGGATGTCTAATACCCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp TGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAAAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WAHLTPDNLPILGPAGQKKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...TTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp ACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTCAGAAACGCCTGTGGCCAAAGGGACCAGGACTGTaGCTGTGTGGCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TPDNLPILGPAGQKRLWPKGPGL*LCGPQG
Trigger: GCCCTGGGGGCCACACAGCCACAGTCCTGGTCCCTT...TGGCCACAGGCGTTTCTGACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGCACTGTCACCGTGGTaGCAGCTCCTGAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQALSPW*QLLKGP
Trigger: TGGTCCCTTCAGGAGCTGCCACCACGGTGACAGTGC...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CACAGCAACAGCCTGTCAGCTGGGGTGAGGGGCCCGGCACTTACAGGGAAGAAAGCAGCACTGTCACCGTaGTGGCAGCTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HSNSLSAGVRGPALTGKKAALSP*WQLLKG
Trigger: TCCCTTCAGGAGCTGCCACCACGGTGACAGTGCTGC...TTTCTTCCCTGTAAGTGCCGGGCCCCTCACCCCAGCTGACAGGCTGTTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CGAGGCTGGTGTCCACCAAGGCAGTTCTACCACTTGTGGCTGCTCCTTCCTCGTGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: RGWCPPRQFYHLWLLLPRVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...ACGAGGAAGGAGCAGCCACAAGTGGTAGAACTGCCTTGGTGGACACCAGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp CCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGTGGTGATGGCCTGCTaGCAGTGGGGACACACCGTC +
Preference number: 4 (lower is better)
Translates to: PEESAAQVGQGEEDRTSRVVMAC*QWGHTV
Trigger: GACGGTGTGTCCCCACTGCCAGCAGGCCATCACCAC...CCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GCCCCACCTCTAGCACCCCAGAGGCGCAAAGTACCCAGAAACAAACCCAGGCTTGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: APPLAPQRRKVPRNKPRLAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...AAGCCTGGGTTTGTTTCTGGGTACTTTGCGCCTCTGGGGTGCTAGAGGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGAGTCCCGAGTCCCAGCTCCGTTAGCACAGGCGCTTGTACGTGTAGATGTAGGGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GVPSPSSVSTGACTCRCRAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...CCTACATCTACACGTACAAGCGCCTGTGCTAACGGAGCTGGGACTCGGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564828.5
ENST00000589159.5
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCAGAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PEESAAQVGQGEEDRTSRAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...CCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp GAAGAGTCAGCGGCTCAGGTAGGGCAGGGTGAAGAGGACAGGACTTCTAGGGGAGCTCCCAGCCCCAAGTaGGAGCGGGAAAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: EESAAQVGQGEEDRTSRGAPSPK*ERESDH
Trigger: GTGGTCACTTTCCCGCTCCCACTTGGGGCTGGGAGC...TCCCCTAGAAGTCCTGTCCTCTTCACCCTGCCCTACCTGAGCCGCTGACTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000589159.5
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
ENST00000634209.1
CDS-3UTR CCA 90 bp CCCAGTTGGGATACACCAGCCACCAGGCAGAGGTCATACCCACACGCAGTGAGGACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PSWDTPATRQRSYPHAVRTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...CCTCACTGCGTGTGGGTATGACCTCTGCCTGGTGGCTGGTGTATCCCAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CCTACGTGGGCCCACCTGACTCCAGACAACTTACCCATTCTCGGCCCAGCAGGTACTTCTAGGGGATGGTaGCACGGCTCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PTWAHLTPDNLPILGPAGTSRGW*HGSQPQ
Trigger: TTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGT...ACCTGCTGGGCCGAGAATGGGTAAGTTGTCTGGAGTCAGGTGGGCCCACGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp AGGAGGCCATGCAGTGGCAGTGCGAGACCAGGAAGGACAGTGGCAGGATACAGTAGGACTTCTAGGGGATaGTGGCACGGCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRPCSGSARPGRTVAGYSRTSRG*WHGSQP
Trigger: GGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCT...ACTGTATCCTGCCACTGTCCTTCCTGGTCTCGCACTGCCACTGCATGGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000567695.6
ENST00000611166.2
ENST00000632680.1
ENST00000632937.1
CDS-3UTR CCA 90 bp AAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGTGCTCTGGCTGCTGTTaGTCCCAGGGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KRTGLLGDGGTAPSPKWECSGCC*SQGERV
Trigger: GACTCTTTCCCCCTGGGACCAACAGCAGCCAGAGCA...CTCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GAAGAGGACAGGACTTCTAGGGGATGGTGGCACGGCTCCCAGCCCCAAGTGGGAGGCCTGGGGACTAACTaGCTAACTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EEDRTSRGWWHGSQPQVGGLGTN*LTALAA
Trigger: AGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC...TCCCACTTGGGGCTGGGAGCCGTGCCACCATCCCCTAGAAGTCCTGTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp GGCCTGGGGACTAACTGGCTAACTGCTCTGGCTGCTGTTGGTCCCAGGGGGAAAGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: GLGTNWLTALAAVGPRGKGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...TTTCCCCCTGGGACCAACAGCAGCCAGAGCAGTTAGCCAGTTAGTCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000399599.7
ENST00000562334.5
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
ENST00000567695.6
ENST00000611166.2
ENST00000631859.1
ENST00000632680.1
ENST00000632937.1
ENST00000633324.1
ENST00000633395.1
CDS-3UTR CCA 90 bp CAGGTACAGTGTCCTCTCTACCTGACACCAGGCAGCTCTCGGGCACTGGGACAGGGTCAGAAACGCCTGTaGCCACAGGCCTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: QVQCPLYLTPGSSRALGQGQKRL*PQAWGL
Trigger: TAGTCCCCAGGCCTGTGGCCACAGGCGTTTCTGACC...CTGTCCCAGTGCCCGAGAGCTGCCTGGTGTCAGGTAGAGAGGACACTGTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000399599.7
ENST00000563332.6
ENST00000563507.5
ENST00000564828.5
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