RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDHR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000099834, ENSG00000273572

Ensembl transcript IDs: ENST00000349570.11, ENST00000358353.8, ENST00000397542.7, ENST00000526077.5, ENST00000529337.1, ENST00000531088.5, ENST00000531177.5, ENST00000531899.5, ENST00000534311.1, ENST00000617105.3, ENST00000619215.2, ENST00000631535.1, ENST00000631565.1, ENST00000632059.1, ENST00000632429.1, ENST00000633633.1, ENST00000634167.1, ENST00000674088.1

Found 1147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTaGGGCTGGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: RALRASVPPRAWGRA*GWGRAPSWPCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGAGGAACGCCT +
Preference number: 1 (lower is better)
Translates to: LRASVPPRAWGRAWG*GRAPSWPCGQGGTP
Trigger: AGGCGTTCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCC +
Preference number: 1 (lower is better)
Translates to: DPRACPTPWPGFREP*FILPRVGGWGSETS
Trigger: GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 90 bp CGGGCTCCCGGCCGCAGCCACAGCCTCCACGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: RAPGRSHSLHGDLGH*VAGKVGLLALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGGCTGCGGCCGGGAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GCCTCGGGAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCAT +
Preference number: 1 (lower is better)
Translates to: ASGRRRALQVVYGKC*SLGVGTAWPDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTCCCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp AGAGCCTCGGGAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCACCGCCT +
Preference number: 1 (lower is better)
Translates to: RASGRRRALQVVYGK*CSLGVGTAWPDPPP
Trigger: AGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTCCCGAGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GGGGCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGTGTCCCGCA +
Preference number: 1 (lower is better)
Translates to: GAAGRRAPRSALVWR*QCGWVPHSPPECPA
Trigger: TGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp CGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCCAAACC +
Preference number: 1 (lower is better)
Translates to: RCRSHWRHPRPGWAR*ERPRLPPSRCPRQT
Trigger: GGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp CCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTG +
Preference number: 1 (lower is better)
Translates to: PAPRHGLGFGSLALF*LGSEAGGARPPVPV
Trigger: CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: EWDPHGPARLPHAMA*VSGALLYSASGRRL
Trigger: CAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACACCTGGG +
Preference number: 1 (lower is better)
Translates to: GGHCRWFTGSAAALG*GQRGQTHRLICTPG
Trigger: CCCAGGTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp ACCACGGGGGCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGTGT +
Preference number: 1 (lower is better)
Translates to: TTGAAGRRAPRSALV*RWQCGWVPHSPPEC
Trigger: ACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGCCCCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCCCCCAGAGCTGGTCGTGGAGGGTCC +
Preference number: 1 (lower is better)
Translates to: PGCGRGWWPQSCARG*MRACASPRAGRGGS
Trigger: GGACCCTCCACGACCAGCTCTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp GGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCAGAGCTGGTCGTGGAGGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: GVDEVGGLRVVPEGG*GPVPPPELVVEGPW
Trigger: CCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACAC +
Preference number: 1 (lower is better)
Translates to: KAAGTAGGLREVLQP*GGDSVARPTASSAH
Trigger: GTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp CGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCAGCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: RRAPRSALVWRWQCG*VPHSPPECPAPAAR
Trigger: TCTGGCTGCTGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp AGGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCAGCAGC +
Preference number: 1 (lower is better)
Translates to: RSAGTTFSTSVAVAV*LGSTFSPGVSRTSS
Trigger: GCTGCTGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp CCCCGTGGTACTGAGCTTGAATGCAGACGTAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGGGCCGCAGGTCGGCGGGCACCACGT +
Preference number: 1 (lower is better)
Translates to: PRGTELECRRSHLRR*RAGTTGAAGRRAPR
Trigger: ACGTGGTGCCCGCCGACCTGCGGCCCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTCGCCAAACCAGACAGCCTTGTACCC +
Preference number: 1 (lower is better)
Translates to: GAIHVQGGRVENDHV*LRPDVLAKPDSLVP
Trigger: GGGTACAAGGCTGTCTGGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCATCTGCACACCTGGGCTCAAGCGCTA +
Preference number: 1 (lower is better)
Translates to: QVVYGKCCSLGVGTA*PDPPPHLHTWAQAL
Trigger: TAGCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp AGCCGCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTaGGCTCTGGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCC +
Preference number: 1 (lower is better)
Translates to: SRKGSLDGSGHGRPA*ALALGAARGMCLSP
Trigger: GGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp AGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTCG +
Preference number: 1 (lower is better)
Translates to: RCLRPPAPKCVALGV*IGSSASPGNLCVGS
Trigger: CGACCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp CACCGTGTTGTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAA +
Preference number: 1 (lower is better)
Translates to: HRVVGLNLCVEGSRL*QCGGGQHNLSLHPE
Trigger: TTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCACAACACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp GGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGT +
Preference number: 1 (lower is better)
Translates to: GPQPLRRRLPPVPVW*WSAQPLPPSGSVSG
Trigger: ACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTaGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTTGG +
Preference number: 1 (lower is better)
Translates to: PQPLRRRLPPVPVWW*SAQPLPPSGSVSGW
Trigger: CCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp TGTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: CGPQPLRRRLPPVPV*WWSAQPLPPSGSVS
Trigger: ACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp TGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCGTGTCCTCCTCCACCCTTATCTCCT +
Preference number: 1 (lower is better)
Translates to: CRPCRGPQPAVASRG*RWSSLSCPPPPLSP
Trigger: AGGAGATAAGGGTGGAGGAGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp CAGTGTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGA +
Preference number: 1 (lower is better)
Translates to: QCGGGQHNLSLHPEV*VVGNSICDGRVEVR
Trigger: TCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp GTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAAC +
Preference number: 1 (lower is better)
Translates to: VVVVSTTSPSIRKCE*LVIRYVMAELRSEN
Trigger: GTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTC +
Preference number: 2 (lower is better)
Translates to: GPARLPHAMAWVSGA*LYSASGRRLGERDL
Trigger: GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 2 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 90 bp CCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCCAAAC +
Preference number: 2 (lower is better)
Translates to: PLPESLAPSTSRVGA*RTTTSASVPMSSPN
Trigger: GTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 2 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 2 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 2 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACA +
Preference number: 2 (lower is better)
Translates to: EGGGHCRWFTGSAAA*GWGQRGQTHRLICT
Trigger: TGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 2 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 2 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 2 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 2 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 2 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCAAGTGCGTCGCCTTaGGGGTTTGCATCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPSASP*GFASAP
Trigger: AGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: QVFETTGSQVRRLGG*HRLLSLPRQSLCRV
Trigger: GACCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 2 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 2 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 2 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GGTGTAGAACAGAATGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGTGGAGTTCACTTTCGTGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GVEQNVVLVAVLSLQ*RLGDDGGVHFRVLL
Trigger: GAGGAGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACATTCTGTTCTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp AGAAGGAAGGTCATGGGGCTGGGGACACTCCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCC +
Preference number: 2 (lower is better)
Translates to: RRKVMGLGTLLATVR*PESGWMMNVPFTFP
Trigger: GGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 2 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 2 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGATTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 2 (lower is better)
Translates to: QGRPVGPSPAEGRSWGWGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...TCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 2 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 90 bp GTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCC +
Preference number: 2 (lower is better)
Translates to: VVVSTTSPSIRKCEW*VIRYVMAELRSENS
Trigger: GGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: VARVWVDDECTIHVSPKDRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: VARVWVDDECTIHVSPKDGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGGGGACGGGCGCCCAGT +
Preference number: 3 (lower is better)
Translates to: VRALRASVPPRA*GRAWGWGRAPS
Trigger: ACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTaGGGCTGGGGACGGGCGCCCAGTTGGCCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: RASVPPRAWGRA*GWGRAPSWPCG
Trigger: ACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 72 bp GGGGCGGGCTCCCGGCCGCAGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGCGGGCAAGGTCGGCCT +
Preference number: 3 (lower is better)
Translates to: GAGSRPQPQPPR*PGSLSSGQGRP
Trigger: AGGCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGGCTGCGGCCGGGAGCCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp TCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SVPPRAWGRAWG*GRAPSWPCGQG
Trigger: TCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 3 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 3 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGG +
Preference number: 3 (lower is better)
Translates to: REPCFILPRVGG*GSETSSARAAG
Trigger: CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
3UTR GCA 72 bp AGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCA +
Preference number: 3 (lower is better)
Translates to: RRRALQVVYGKC*SLGVGTAWPDP
Trigger: TGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp CCCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGCCTGTGCCTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: PRVWTRLVASEL*QRVDEGLCLPQ
Trigger: CTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACCCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: PHGPARLPHAMA*VSGALLYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp GGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCT +
Preference number: 3 (lower is better)
Translates to: GTPMDPRACPTP*PGFREPCFILP
Trigger: AGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 3 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAG +
Preference number: 3 (lower is better)
Translates to: GRRAPRSALVWR*QCGWVPHSPPE
Trigger: CTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCC +
Preference number: 3 (lower is better)
Translates to: AAGRRAPRSALV*RWQCGWVPHSP
Trigger: GGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGCGCCCAGTTGGCCTTGTGGTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGCTGGGGCTCCGGAGCT +
Preference number: 3 (lower is better)
Translates to: GAQLALWSGRNA*LSKPWGWGSGA
Trigger: AGCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 72 bp AGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCTCCGTCCCGATGTCCT +
Preference number: 3 (lower is better)
Translates to: SHWRHPRPGWAR*ERPRLPPSRCP
Trigger: AGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp CGCCATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCA +
Preference number: 3 (lower is better)
Translates to: RHGLGFGSLALF*LGSEAGGARPP
Trigger: TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp CACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTCGCCAAACCAGACAGC +
Preference number: 3 (lower is better)
Translates to: HVQGGRVENDHV*LRPDVLAKPDS
Trigger: GCTGTCTGGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 3 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp AGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGT +
Preference number: 3 (lower is better)
Translates to: RPPAPKCVALGV*IGSSASPGNLC
Trigger: ACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp GTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: VGLNLCVEGSRL*QCGGGQHNLSL
Trigger: GAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTaGGCTCTGGCTTTGGGAGCAGCGAGGGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: GSLDGSGHGRPA*ALALGAARGMC
Trigger: ACACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp CCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCA +
Preference number: 3 (lower is better)
Translates to: PRSALVWRWQCG*VPHSPPECPAP
Trigger: TGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGATGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 3 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTaGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: LRRRLPPVPVWW*SAQPLPPSGSV
Trigger: CACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGT +
Preference number: 3 (lower is better)
Translates to: PLRRRLPPVPVW*WSAQPLPPSGS
Trigger: ACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGA +
Preference number: 3 (lower is better)
Translates to: QPLRRRLPPVPV*WWSAQPLPPSG
Trigger: TCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: PKCVALGVCIGSSASPGNWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 3 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 72 bp ATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: IRESADKPQGIP*WFWAWAPSLGS
Trigger: AGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp GGGGACACTCCTGGCCACGGTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACCATTCACGTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: GDTPGHGEVARV*VDDECTIHVSP
Trigger: AGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 3 (lower is better)
Translates to: VARVWVDDECTIHVSPKDVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 3 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp CTCCTGTTCGGAAACTTGTATCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGTGTTGTGGGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: LLFGNLYLNDCG*GARGHRVVGLN
Trigger: GTTGAGGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp ACACTCCTGGCCACGGTGAGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTCACGTTTCCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: TLLATVRLPESG*MMNVPFTFPLK
Trigger: CTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 72 bp GGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATATGTGATGGCCGAGTT +
Preference number: 3 (lower is better)
Translates to: GGQHNLSLHPEV*VVGNSICDGRV
Trigger: AACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTGATGGCCGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: VSTTSPSIRKCE*LVIRYVMAELR
Trigger: CCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGACGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMARCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSREVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTCAGTGCTGAGGGTGTaGGCCCAGGCAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVSVLRV*AQAASS
Trigger: GGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGATTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGATGTAGACAGGTCTaGAGTCACCGTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGGCRQV*SHRPAP
Trigger: TGGGGCAGGACGGTGACTGCAGACCTGTCTACATCC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAARCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGATGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMATHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GHVRPLVEVQGPVQPQGGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAALAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
3UTR CAA 72 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCACCTGAAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKR*SSEGPPPEDGV
Trigger: CACCCCATCTTCAGGTGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTCACAGGTGGGGAGACTaGGGCCAAGTGGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVHRWGD*GQVGRR
Trigger: GCGCCTGCCCACTTGGCCTCAGTCTCCCCACCTGTG...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSALCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAARWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGAGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGRPVGPSPAEGRSWGWGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...TCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSACLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCGAGACTGAGGCCAAGTaGGCAGGCGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSETEAK*AGAGPG
Trigger: CCCTGGGCCAGCGCCTGCCCACTTGGCCTCAGTCTC...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGCAGAAGGGACACATaGGCCCCCGGGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRRDT*APGQEL
Trigger: CAGCTCCTGCCCGGGGGCCCATGTGTCCCTTCTGCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCAGAAGGGACACATaGGCCCCCGGGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARGRRDT*APGQEL
Trigger: CAGCTCCTGCCCGGGGGCCCATGTGTCCCTTCTGCC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000633633.1
ENST00000674088.1
3UTR CAA 72 bp GAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCCTCCGTCCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ESLAPSTSRVGA*RTTTSASVPMS
Trigger: GGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSARGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCISGQC*GCGPRQ
Trigger: CTGCCTGGGCCCACACCCTCAGCACTGACCACTGAT...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGCACAGGTGGGGAGACTaGGGCCAAGTGGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRHRWGD*GQVGRR
Trigger: GCGCCTGCCCACTTGGCCTCAGTCTCCCCACCTGTG...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCCTGCAGTCACCGTCCTaGCCCACAGGTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVLQSPS*PTGGET
Trigger: AGTCTCCCCACCTGTGGGGCAGGACGGTGACTGCAG...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARARWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARARPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSARAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCAAGTGGGCAGGCGCTaGCCCAGGGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPQVGRR*PRVPII
Trigger: GATGATGGGGACCCTGGGCCAGCGCCTGCCCACTTG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 72 bp GAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: ETTGSQVRRLGG*HRLLSLPRQSL
Trigger: CAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 72 bp AGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCLRPPAPKCVA*GVCIGSSASPG
Trigger: GCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCISGQC*GCGPRQ
Trigger: CTGCCTGGGCCCACACCCTCAGCACTGACCACTGAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSAREGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAATNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8