RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDHR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000099834, ENSG00000273572

Ensembl transcript IDs: ENST00000349570.11, ENST00000358353.8, ENST00000397542.7, ENST00000526077.5, ENST00000529337.1, ENST00000531088.5, ENST00000531177.5, ENST00000531899.5, ENST00000534311.1, ENST00000617105.3, ENST00000619215.2, ENST00000631535.1, ENST00000631565.1, ENST00000632059.1, ENST00000632429.1, ENST00000633633.1, ENST00000634167.1, ENST00000674088.1

Found 1147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTaGGGCTGGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: RALRASVPPRAWGRA*GWGRAPSWPCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGAGGAACGCCT +
Preference number: 1 (lower is better)
Translates to: LRASVPPRAWGRAWG*GRAPSWPCGQGGTP
Trigger: AGGCGTTCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCC +
Preference number: 1 (lower is better)
Translates to: DPRACPTPWPGFREP*FILPRVGGWGSETS
Trigger: GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 90 bp CGGGCTCCCGGCCGCAGCCACAGCCTCCACGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: RAPGRSHSLHGDLGH*VAGKVGLLALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGGCTGCGGCCGGGAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GCCTCGGGAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCAT +
Preference number: 1 (lower is better)
Translates to: ASGRRRALQVVYGKC*SLGVGTAWPDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTCCCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp AGAGCCTCGGGAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCACCGCCT +
Preference number: 1 (lower is better)
Translates to: RASGRRRALQVVYGK*CSLGVGTAWPDPPP
Trigger: AGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTCCCGAGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GGGGCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGTGTCCCGCA +
Preference number: 1 (lower is better)
Translates to: GAAGRRAPRSALVWR*QCGWVPHSPPECPA
Trigger: TGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp CGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCCAAACC +
Preference number: 1 (lower is better)
Translates to: RCRSHWRHPRPGWAR*ERPRLPPSRCPRQT
Trigger: GGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp CCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTG +
Preference number: 1 (lower is better)
Translates to: PAPRHGLGFGSLALF*LGSEAGGARPPVPV
Trigger: CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: EWDPHGPARLPHAMA*VSGALLYSASGRRL
Trigger: CAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp GGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACACCTGGG +
Preference number: 1 (lower is better)
Translates to: GGHCRWFTGSAAALG*GQRGQTHRLICTPG
Trigger: CCCAGGTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp ACCACGGGGGCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGTGT +
Preference number: 1 (lower is better)
Translates to: TTGAAGRRAPRSALV*RWQCGWVPHSPPEC
Trigger: ACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGCCCCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCCCCCAGAGCTGGTCGTGGAGGGTCC +
Preference number: 1 (lower is better)
Translates to: PGCGRGWWPQSCARG*MRACASPRAGRGGS
Trigger: GGACCCTCCACGACCAGCTCTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp GGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCAGAGCTGGTCGTGGAGGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: GVDEVGGLRVVPEGG*GPVPPPELVVEGPW
Trigger: CCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACAC +
Preference number: 1 (lower is better)
Translates to: KAAGTAGGLREVLQP*GGDSVARPTASSAH
Trigger: GTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp CGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCAGCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: RRAPRSALVWRWQCG*VPHSPPECPAPAAR
Trigger: TCTGGCTGCTGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp AGGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCAGCAGC +
Preference number: 1 (lower is better)
Translates to: RSAGTTFSTSVAVAV*LGSTFSPGVSRTSS
Trigger: GCTGCTGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp CCCCGTGGTACTGAGCTTGAATGCAGACGTAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGGGCCGCAGGTCGGCGGGCACCACGT +
Preference number: 1 (lower is better)
Translates to: PRGTELECRRSHLRR*RAGTTGAAGRRAPR
Trigger: ACGTGGTGCCCGCCGACCTGCGGCCCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 90 bp GGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTCGCCAAACCAGACAGCCTTGTACCC +
Preference number: 1 (lower is better)
Translates to: GAIHVQGGRVENDHV*LRPDVLAKPDSLVP
Trigger: GGGTACAAGGCTGTCTGGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCATCTGCACACCTGGGCTCAAGCGCTA +
Preference number: 1 (lower is better)
Translates to: QVVYGKCCSLGVGTA*PDPPPHLHTWAQAL
Trigger: TAGCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 90 bp AGCCGCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTaGGCTCTGGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCC +
Preference number: 1 (lower is better)
Translates to: SRKGSLDGSGHGRPA*ALALGAARGMCLSP
Trigger: GGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp AGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTCG +
Preference number: 1 (lower is better)
Translates to: RCLRPPAPKCVALGV*IGSSASPGNLCVGS
Trigger: CGACCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 90 bp CACCGTGTTGTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAA +
Preference number: 1 (lower is better)
Translates to: HRVVGLNLCVEGSRL*QCGGGQHNLSLHPE
Trigger: TTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCACAACACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp GGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGT +
Preference number: 1 (lower is better)
Translates to: GPQPLRRRLPPVPVW*WSAQPLPPSGSVSG
Trigger: ACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp CCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTaGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTTGG +
Preference number: 1 (lower is better)
Translates to: PQPLRRRLPPVPVWW*SAQPLPPSGSVSGW
Trigger: CCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp TGTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: CGPQPLRRRLPPVPV*WWSAQPLPPSGSVS
Trigger: ACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp TGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCGTGTCCTCCTCCACCCTTATCTCCT +
Preference number: 1 (lower is better)
Translates to: CRPCRGPQPAVASRG*RWSSLSCPPPPLSP
Trigger: AGGAGATAAGGGTGGAGGAGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 90 bp CAGTGTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGA +
Preference number: 1 (lower is better)
Translates to: QCGGGQHNLSLHPEV*VVGNSICDGRVEVR
Trigger: TCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 90 bp GTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAAC +
Preference number: 1 (lower is better)
Translates to: VVVVSTTSPSIRKCE*LVIRYVMAELRSEN
Trigger: GTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTC +
Preference number: 2 (lower is better)
Translates to: GPARLPHAMAWVSGA*LYSASGRRLGERDL
Trigger: GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 2 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 2 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: APAQATRRTHPQRASVQVEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 90 bp CCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCCAAAC +
Preference number: 2 (lower is better)
Translates to: PLPESLAPSTSRVGA*RTTTSASVPMSSPN
Trigger: GTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 2 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 2 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 2 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GAAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGCCAGACCCACCGCCTCATCTGCACA +
Preference number: 2 (lower is better)
Translates to: EGGGHCRWFTGSAAA*GWGQRGQTHRLICT
Trigger: TGTGCAGATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 2 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 2 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 2 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 2 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PKCVALGVCIGSSASPGNEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 2 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCAAGTGCGTCGCCTTaGGGGTTTGCATCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPSASP*GFASAP
Trigger: AGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 2 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTC +
Preference number: 2 (lower is better)
Translates to: QVFETTGSQVRRLGG*HRLLSLPRQSLCRV
Trigger: GACCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 2 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 2 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 2 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 2 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR TCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp GGTGTAGAACAGAATGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGTGGAGTTCACTTTCGTGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GVEQNVVLVAVLSLQ*RLGDDGGVHFRVLL
Trigger: GAGGAGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACATTCTGTTCTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 90 bp AGAAGGAAGGTCATGGGGCTGGGGACACTCCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCC +
Preference number: 2 (lower is better)
Translates to: RRKVMGLGTLLATVR*PESGWMMNVPFTFP
Trigger: GGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR GCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 2 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 2 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLVIRYVMAELRSENSGSRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp CAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGATTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 2 (lower is better)
Translates to: QGRPVGPSPAEGRSWGWGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...TCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 2 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 2 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 90 bp GTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCC +
Preference number: 2 (lower is better)
Translates to: VVVSTTSPSIRKCEW*VIRYVMAELRSENS
Trigger: GGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: VARVWVDDECTIHVSPKDRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR GCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR TCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 2 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: VARVWVDDECTIHVSPKDGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGGGGACGGGCGCCCAGT +
Preference number: 3 (lower is better)
Translates to: VRALRASVPPRA*GRAWGWGRAPS
Trigger: ACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTaGGGCTGGGGACGGGCGCCCAGTTGGCCTTGTGGT +
Preference number: 3 (lower is better)
Translates to: RASVPPRAWGRA*GWGRAPSWPCG
Trigger: ACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 72 bp GGGGCGGGCTCCCGGCCGCAGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGCGGGCAAGGTCGGCCT +
Preference number: 3 (lower is better)
Translates to: GAGSRPQPQPPR*PGSLSSGQGRP
Trigger: AGGCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGGCTGCGGCCGGGAGCCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp TCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGGCCTTGTGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SVPPRAWGRAWG*GRAPSWPCGQG
Trigger: TCCCTGACCACAAGGCCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 3 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 3 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGG +
Preference number: 3 (lower is better)
Translates to: REPCFILPRVGG*GSETSSARAAG
Trigger: CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
3UTR GCA 72 bp AGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACAGCGTGGCCAGACCCA +
Preference number: 3 (lower is better)
Translates to: RRRALQVVYGKC*SLGVGTAWPDP
Trigger: TGGGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp CCCCGGGTGTGGACGAGGTTGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGCCTGTGCCTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: PRVWTRLVASEL*QRVDEGLCLPQ
Trigger: CTGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCACAACTCTGAGGCCACCAACCTCGTCCACACCCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: PHGPARLPHAMA*VSGALLYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp GGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCT +
Preference number: 3 (lower is better)
Translates to: GTPMDPRACPTP*PGFREPCFILP
Trigger: AGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 3 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGTCGGCGGGCACCACGTTCAGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAG +
Preference number: 3 (lower is better)
Translates to: GRRAPRSALVWR*QCGWVPHSPPE
Trigger: CTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GCCGCAGGTCGGCGGGCACCACGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCC +
Preference number: 3 (lower is better)
Translates to: AAGRRAPRSALV*RWQCGWVPHSP
Trigger: GGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCGCCGACCTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGCGCCCAGTTGGCCTTGTGGTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGCTGGGGCTCCGGAGCT +
Preference number: 3 (lower is better)
Translates to: GAQLALWSGRNA*LSKPWGWGSGA
Trigger: AGCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 72 bp AGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCTCCGTCCCGATGTCCT +
Preference number: 3 (lower is better)
Translates to: SHWRHPRPGWAR*ERPRLPPSRCP
Trigger: AGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp CGCCATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCA +
Preference number: 3 (lower is better)
Translates to: RHGLGFGSLALF*LGSEAGGARPP
Trigger: TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp CACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTCGCCAAACCAGACAGC +
Preference number: 3 (lower is better)
Translates to: HVQGGRVENDHV*LRPDVLAKPDS
Trigger: GCTGTCTGGTTTGGCGAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 3 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp AGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGT +
Preference number: 3 (lower is better)
Translates to: RPPAPKCVALGV*IGSSASPGNLC
Trigger: ACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR GCA 72 bp GTGGGCCTCAACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: VGLNLCVEGSRL*QCGGGQHNLSL
Trigger: GAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTaGGCTCTGGCTTTGGGAGCAGCGAGGGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: GSLDGSGHGRPA*ALALGAARGMC
Trigger: ACACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp CCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCGGAGTGTCCCGCACCA +
Preference number: 3 (lower is better)
Translates to: PRSALVWRWQCG*VPHSPPECPAP
Trigger: TGGTGCGGGACACTCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGATGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 3 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTaGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: LRRRLPPVPVWW*SAQPLPPSGSV
Trigger: CACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGT +
Preference number: 3 (lower is better)
Translates to: PLRRRLPPVPVW*WSAQPLPPSGS
Trigger: ACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp CAACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGA +
Preference number: 3 (lower is better)
Translates to: QPLRRRLPPVPV*WWSAQPLPPSG
Trigger: TCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 3 (lower is better)
Translates to: PKCVALGVCIGSSASPGNWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR-3UTR CAA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 3 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR TCA 72 bp ATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: IRESADKPQGIP*WFWAWAPSLGS
Trigger: AGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CCA 72 bp GGGGACACTCCTGGCCACGGTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACCATTCACGTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: GDTPGHGEVARV*VDDECTIHVSP
Trigger: AGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 3 (lower is better)
Translates to: VARVWVDDECTIHVSPKDVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 3 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR GCA 72 bp CTCCTGTTCGGAAACTTGTATCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGTGTTGTGGGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: LLFGNLYLNDCG*GARGHRVVGLN
Trigger: GTTGAGGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp ACACTCCTGGCCACGGTGAGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTCACGTTTCCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: TLLATVRLPESG*MMNVPFTFPLK
Trigger: CTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR TCA 72 bp GGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATATGTGATGGCCGAGTT +
Preference number: 3 (lower is better)
Translates to: GGQHNLSLHPEV*VVGNSICDGRV
Trigger: AACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CCA 72 bp GTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTGATGGCCGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: VSTTSPSIRKCE*LVIRYVMAELR
Trigger: CCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGACGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMARCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSREVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGGGTGCGGGCTCTGCGGGCATCGGTGCCTCCGCGGGCTTGGGGTCGTGCGTGTCAGTGCTGAGGGTGTaGGCCCAGGCAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: GGAGSAGIGASAGLGSCVSVLRV*AQAASS
Trigger: GGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGA...CACGCACGACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAGCCCGCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGATTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGATGTAGACAGGTCTaGAGTCACCGTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGGCRQV*SHRPAP
Trigger: TGGGGCAGGACGGTGACTGCAGACCTGTCTACATCC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAARCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGATGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMATHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GHVRPLVEVQGPVQPQGGWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...CCCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLQGGSR*PAGPAH
Trigger: GTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAALAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
3UTR CAA 72 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCACCTGAAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKR*SSEGPPPEDGV
Trigger: CACCCCATCTTCAGGTGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTCACAGGTGGGGAGACTaGGGCCAAGTGGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVHRWGD*GQVGRR
Trigger: GCGCCTGCCCACTTGGCCTCAGTCTCCCCACCTGTG...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSALCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTATGGACCCGCGCGCCTaGCCCACGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPMDPRA*PTPWPG
Trigger: CCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCAT...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGACTGGGCCTGGGCCATaGTCCCCGGGGGTCGGACGA +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQTGPGP*SPGVGR
Trigger: TCGTCCGACCCCCGGGGACCATGGCCCAGGCCCAGT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAARWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGAGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGRPVGPSPAEGRSWGWGVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...TCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGTGGGGACAGCGTaGCCAGACCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGVGTA*PDPPPH
Trigger: ATGAGGCGGTGGGTCTGGCCACGCTGTCCCCACCCC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCTGCAGCCTTGGGGTaGGGACAGCGTGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVAAALG*GQRGQT
Trigger: GGTCTGGCCACGCTGTCCCCACCCCAAGGCTGCAGC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCTCTGCGGGCATCGGTaGCTCCGCGGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGLCGHR*LRGLGV
Trigger: GACCCCAAGCCCGCGGAGGCACCGATGCCCGCAGAG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAACCCACCGCCTCATCTaGACACCTGGGCTCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGTHRLI*TPGLKR
Trigger: GCGCTTGAGCCCAGGTGTGCAGATGAGGCGGTGGGT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
67% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSACLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGGGTCGTGCGTGGGGCTaGGGACGGGCGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLGRAWG*GRAPSW
Trigger: CCAACTGGGCGCCCGTCCCCAGCCCCACGCACGACC...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGTGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCCTGCCCCACGCCATaGCCTGGGTTTCGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNACPTP*PGFREP
Trigger: AGGCTCCCGAAACCCAGGCCATGGCGTGGGGCAGGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: APAQATRRTHPQRASVQVLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLPLAG*SSPLPE
Trigger: TTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCGAGACTGAGGCCAAGTaGGCAGGCGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSETEAK*AGAGPG
Trigger: CCCTGGGCCAGCGCCTGCCCACTTGGCCTCAGTCTC...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGCAGAAGGGACACATaGGCCCCCGGGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRRDT*APGQEL
Trigger: CAGCTCCTGCCCGGGGGCCCATGTGTCCCTTCTGCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCAGAAGGGACACATaGGCCCCCGGGCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARGRRDT*APGQEL
Trigger: CAGCTCCTGCCCGGGGGCCCATGTGTCCCTTCTGCC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000633633.1
ENST00000674088.1
3UTR CAA 72 bp GAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCCTCCGTCCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ESLAPSTSRVGA*RTTTSASVPMS
Trigger: GGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSARGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGPGRRV*AGLASR
Trigger: CCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCISGQC*GCGPRQ
Trigger: CTGCCTGGGCCCACACCCTCAGCACTGACCACTGAT...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGCACAGGTGGGGAGACTaGGGCCAAGTGGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRHRWGD*GQVGRR
Trigger: GCGCCTGCCCACTTGGCCTCAGTCTCCCCACCTGTG...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGCCCTCATCGCCGCTaGCGGAGTCACTGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPRPHRR*RSHWRH
Trigger: ATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCCACCGGCTCCCAAGTaGGTCGCCTTGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNPPAPK*VALGVC
Trigger: GCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCCTGGTCTGGCTCCTaGTCAGGCCACACGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLSWSGS*SGHTAH
Trigger: GTGCGCCGTGTGGCCTGAGCAGGAGCCAGACCAGGA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCCTGCAGTCACCGTCCTaGCCCACAGGTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVLQSPS*PTGGET
Trigger: AGTCTCCCCACCTGTGGGGCAGGACGGTGACTGCAG...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGCAGTACTGGGCCTaGGCCATGGTCCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETEQYWA*AMVPGG
Trigger: ACCCCCGGGGACCATGGCCCAGGCCCAGTACTGCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPRVTS*PSGTWM
Trigger: CATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARARWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARARPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSARAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGACGGGCGCCCAGTTaGCCTTGTGGTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPGRAPS*PCGQGG
Trigger: TCCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCGGGTCGGAGGCTaGGGGAGCGAGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPRVGG*GSETSS
Trigger: ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGTCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGSERV*RLGLAQ
Trigger: CTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GTCCAGGGTGGGCGCGTTGAGAACGACCACGTCTGCCTCCGTCCCGATGTCCTCCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQGGRVENDHVCLRPDVLPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCAAGTGGGCAGGCGCTaGCCCAGGGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPQVGRR*PRVPII
Trigger: GATGATGGGGACCCTGGGCCAGCGCCTGCCCACTTG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 72 bp GAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: ETTGSQVRRLGG*HRLLSLPRQSL
Trigger: CAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 72 bp AGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCLRPPAPKCVA*GVCIGSSASPG
Trigger: GCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGGCAGCTGCATCCTTaGCCACAACGCCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGQLHP*PQRPLQ
Trigger: CTGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPRVGGWGSETSSARAAGKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGGTGCCAGAGGGTGGATaGGGGCCTGTGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWVPEGG*GPVPPP
Trigger: TGGGGGAGGCACAGGCCCTCATCCACCCTCTGGCAC...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCCCCGGCAGGTGTTTaGGACCACCGGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPPAGV*DHRLPS
Trigger: ACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCISGQC*GCGPRQ
Trigger: CTGCCTGGGCCCACACCCTCAGCACTGACCACTGAT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSASRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCCGCGCCCTCGCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: PAPSPSSPLPESLAPSTSGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...GGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGCGAGGGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGAGATGGCAGTATGTaGCCCGTGGGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGDGSM*PVGTAP
Trigger: CGGGGCTGTCCCCACGGGGCACATACTGCCATCTCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp AGGTCATGTTCGGCCGCTCGTAGAAGTCCAGGGGCCGGTCCAGCCTCAGGGCGGCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RSCSAARRSPGAGPASGRLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...CCGCCCTGAGGCTGGACCGGCCCCTGGACTTCTACGAGCGGCCGAACATGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSAREGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCAAGTTGGACTGAGTaGAGGGGTCAACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAPSWTE*RGQPGG
Trigger: GCCCCCTGGTTGACCCCTGCACTCAGTCCAACTTGG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSAGPAH*QKEGQS
Trigger: CGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAATNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGATTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGAAGGTCATGGGGCTaGGGACACTCCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGRSWG*GHSWPR
Trigger: CCGTGGCCAGGAGTGTCCCCAGCCCCATGACCTTCC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCGCCCAGTTGGCCTTGTaGTCAGGGAGGAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSAQLAL*SGRNAW
Trigger: CCAGGCGTTCCTCCCTGACCACAAGGCCAACTGGGC...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGCTCCTTGGTCAGGATaGACCTCACCGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGAPWSG*TSPPWG
Trigger: GCCCCACGGCGGTGAGGTCCATCCTGACCAAGGAGC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCGCTGCCGGAGTCACTaGCGCCATCCACGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWRCRSH*RHPRPG
Trigger: CCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAAGTGCTGCAGCCTTaGGGTGGGGACAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSEVLQP*GGDSVA
Trigger: GGCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTTGGCGGCTGTCACCTaGCAGGAGGGTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPLAAVT*QEGLSG
Trigger: CCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCCCAAGACCCCATCTTaGCGGCTGTCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPPKTPS*RLSPGR
Trigger: CCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARSSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGAGAACTCCGGGTCCTaGGCCTGGATCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVENSGS*AWILRG
Trigger: GCCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGCGACAGGGGACTGAGTaGATGGGACCCCCATGGACC +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLRQGTE*MGPPWT
Trigger: GGTCCATGGGGGTCCCATTCACTCAGTCCCCTGTCG...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCCGCAAGGGATCCCTTaGTGGTTCTGGGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRPQGIP*WFWAWA
Trigger: CGCCCATGCCCAGAACCATCAAGGGATCCCTTGCGG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTCGCGGTCCTCAGCCTaGAGTTGCGTCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVSRSSA*SCVSGM
Trigger: CATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGA...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHEGSRL*QCGGGQ
Trigger: CTGACCACCACCACACTGGCACAGGCGGGAGCCTTC...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGTCGCCTTGGGGGTTTaGATCGGCTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRVALGV*IGSSAS
Trigger: GGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGAC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGCAGGGTGTTTACTaGTGCGCTCCAACCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGQGVY*CAPTQA
Trigger: TGCTTGGGTTGGAGCGCAGCAGTAAACACCCTGCCC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGGCAGGGTGTTTACTaGTGCGCTCCAACCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVGQGVY*CAPTQA
Trigger: TGCTTGGGTTGGAGCGCAGCAGTAAACACCCTGCCC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTTTACGACCGGCTTCTaGCAAGGGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVFTTGF*QGGSRW
Trigger: CCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAA...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTGCAGTCACCGTCCTaGCCCACAGGTGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPLQSPS*PTGGET
Trigger: AGTCTCCCCACCTGTGGGGCAGGACGGTGACTGCAG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVREMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGCGGTGGCAGTGTGGCTaGGTTCCACATTCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGRWQCG*VPHSPP
Trigger: CGGGGGAGAATGTGGAACCCAGCCACACTGCCACCG...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGCAGTATGTGCCCCGTaGGGACAGCCCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETAVCAP*GQPRGT
Trigger: AGTACCACGGGGCTGTCCCCACGGGGCACATACTGC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARASGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCCCACGCCATGGCCTaGGTTTCGGGAGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPHAMA*VSGALL
Trigger: AAGCAAGGCTCCCGAAACCCAGGCCATGGCGTGGGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGGGGACTGAGTGAATaGGACCCCCATGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRGLSE*DPHGPA
Trigger: CGCGGGTCCATGGGGGTCCCATTCACTCAGTCCCCT...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGCGGGCACTGCAGGTaGTTTACGGGAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPGGHCR*FTGSAA
Trigger: TGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARATSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTGGGCTCTGGCTTTaGGAGCAGCGAGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPGLWL*EQRGEC
Trigger: ACATTCCCCTCGCTGCTCCCAAAGCCAGAGCCCAGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLSEWDPHGPARLPHAMANQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CAAGGTCGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGATGGATCCTCAGAGGCTaGGAAGGGGCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QGRPVGPSPAEGRSWGWGWILRG*EGAAAS
Trigger: GGATGCAGCTGCCCCTTCTCAGCCTCTGAGGATCCA...TCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTGGCCCAAGTTGGACTaGGTGCAGGGGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPWPKLD*VQGSTR
Trigger: CCTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
CDS-3UTR TCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCAGCCATCTGAGAAGGTaGAGGGCAGGAACCACGGGG +
Preference number: 4 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSSHLRR*RAGTTG
Trigger: CCCCGTGGTTCCTGCCCTGCACCTTCTCAGATGGCT...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGTGGCCTCAGAGTTGTaGCAGAGGGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRVASEL*QRVDEG
Trigger: GCCCTCATCCACCCTCTGGCACAACTCTGAGGCCAC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCTGGTTGGTGGGAGGTaGTGTTTTCTGCACCCGGGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSLVGGR*CFLHPG
Trigger: CCCCGGGTGCAGAAAACAGCACCTCCCACCAACCAG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTTGGCTTTGGGGTCTGTaGTGTGTCCCCACCGGGAGT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSWLWGL*CVPTGS
Trigger: ACTCCCGGTGGGGACACAGCACAGACCCCAAAGCCA...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGAGAACGACCACGTCTaGCTCCGTCCCGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPENDHV*LRPDVL
Trigger: GAGGACATCGGGACGGAGGCAGACGTGGTCGTTCTC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGTGGTTTACGGGAAGTaGTGCAGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGVVYGK*CSLGVG
Trigger: CCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCAC...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGAAGGCGGCGGGCACTaGAGGTGGTTTACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLEGGGH*RWFTGS
Trigger: ACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTTC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGATGTAGACAGGTCTaGAGTCACCGTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGCRQV*SHRPAP
Trigger: TGGGGCAGGACGGTGACTGCAGACCTGTCTACATCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARATNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGTGGCGGTGGCAGTGTaGCTGGGTTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVVAVAV*LGSTFS
Trigger: GGAGAATGTGGAACCCAGCCACACTGCCACCGCCAC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: PRVGGWGSETSSARAAGGIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGSKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCACTTCCCAGACTAGCTaGCACAGAGCCTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCTSQTS*HRASGR
Trigger: CCTTCCCGAGGCTCTGTGCCAGCTAGTCTGGGAAGT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAAGTGCGTCGCCTTaGGGGTTTGCATCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPSASP*GFASAP
Trigger: AGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCTCAGTGCTGAGGGTGTaGGCCCAGGCAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSSVLRV*AQAASS
Trigger: GGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGA...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
3UTR CAA 72 bp AGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RFQKGTRTPGRC*RPPAPKCVALG
Trigger: CCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETVASRG*RWSSLS
Trigger: CGAAAGTGAACTCCACCGTCATCCCCGAGACGCAAC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPTPPSL*SFTTGF
Trigger: GAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGT...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGTTTACGGGAAGTGCTaGAGCCTTGGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLVYGKC*SLGVGT
Trigger: TGTCCCCACCCCAAGGCTGCAGCACTTCCCGTAAAC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGGGCAGGGTGTTTACTaGTGCGCTCCAACCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRGQGVY*CAPTQA
Trigger: TGCTTGGGTTGGAGCGCAGCAGTAAACACCCTGCCC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGGCAGGGTGTTTACTaGTGCGCTCCAACCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGQGVY*CAPTQA
Trigger: TGCTTGGGTTGGAGCGCAGCAGTAAACACCCTGCCC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCACGAACACCCTTAGCTaGGTCACCAATGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPTNTLS*VTNVPP
Trigger: CGGAGGCACATTGGTGACCCAGCTAAGGGTGTTCGT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGCACTAGTGTGGCGGTaGCAGTGTGGCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: FSTSVAVAVWLGSTFSPGALVWR*QCGWVP
Trigger: TGGAACCCAGCCACACTGCCACCGCCACACTAGTGC...TCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: SASGRRLGERDLQCPCGWIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSPVPVW*WSAQPL
Trigger: GAGAGGTTGTGCTGACCACCACCACACTGGCACAGG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCTGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGATGGACCTCACCGCCGTaGGGCTTCCGCCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRWTSPP*GFRQLG
Trigger: CCCGAGCTGGCGGAAGCCCCACGGCGGTGAGGTCCA...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCCTCATCTGCACACCTaGGCTCAAGCGCTAATGACG +
Preference number: 4 (lower is better)
Translates to: PKCVALGVCIGSSASPGNPHLHT*AQALMT
Trigger: CGTCATTAGCGCTTGAGCCCAGGTGTGCAGATGAGG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTCAGTCCAGGTCACTaGGCAGGGTGTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLSPGH*AGCLLL
Trigger: CAGCAGTAAACACCCTGCCCAGTGACCTGGACTGAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATCAAGTGGGCAGGCGCTaGCCCAGGGTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHQVGRR*PRVPII
Trigger: GATGATGGGGACCCTGGGCCAGCGCCTGCCCACTTG...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVSLDPK*KGGGQG
Trigger: GCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGA...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGGCTGGGTCACCAATGTaGCTCCGCTCTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWAGSPM*LRSDTA
Trigger: TGCTGTGTCAGAGCGGAGGCACATTGGTGACCCAGC...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp TTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGACTGAGAAGGGGCAGCTaGATCCTTGACCACAACGCC +
Preference number: 4 (lower is better)
Translates to: FSTSVAVAVWLGSTFSPGLRRGS*ILDHNA
Trigger: GGCGTTGTGGTCAAGGATGCAGCTGCCCCTTCTCAG...TCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp CGTGTCCTCCTCCACCCTTATCTCCTTGGTCTTAAAGGGGAATTCGGGGGCATTGAGCGAGACCTCCAGTaGCCGTGCGGCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVLLHPYLLGLKGEFGGIERDLQ*PCGWGR
Trigger: TCTCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTC...AATGCCCCCGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGAGGAGGACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGGGTTTCGGGAGCCTTaGTTTATTCTGCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRGFREP*FILPRV
Trigger: GACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CATGGCCTGGGTTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGTGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HGLGFGSLALFCLGSEAGCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCAGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTTGTGGACGAGGTTGGTaGCCTCAGAGTTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSCGRGW*PQSCAR
Trigger: TCTGGCACAACTCTGAGGCCACCAACCTCGTCCACA...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGG +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSLSLKQ*LLLVIR
Trigger: CCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: FILPRVGGWGSETSSARAGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGCAGGGTGTTTACTGCTaGGCTCCAACCCAAGCATGT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGQGVYC*APTQAC
Trigger: ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTG...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATTTCACAGAGCAGTACTaGGCCTGGGCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHFTEQY*AWAMVP
Trigger: GGGGACCATGGCCCAGGCCCAGTACTGCTCTGTGAA...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELWPSGT*MSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCA...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GSLALFCLGSEAGGARPPNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCGAGGTTGCCCGAGTCTaGGTGGATGATGAATGTACC +
Preference number: 4 (lower is better)
Translates to: FREPCFILPRVGGWGSETEVARV*VDDECT
Trigger: GGTACATTCATCATCCACCCAGACTCGGGCAACCTC...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATAGTTGTGCCAGAGGGTaGATGAGGGCCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHSCARG*MRACAS
Trigger: GGAGGCACAGGCCCTCATCCACCCTCTGGCACAACT...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGTGCCTCCGCGGGCTTaGGGTCGTGCGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VARVWVDDECTIHVSPKDVPPRA*GRAWGW
Trigger: CCAGCCCCACGCACGACCCCAAGCCCGCGGAGGCAC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTTCGTTTGGCCCAAGTTaGACTGAGTGCAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPSFGPS*TECRGQ
Trigger: TTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGA...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
CDS-3UTR CCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCTCCAGCCTCTGGGGATaGGGGGACATCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TCISMTVVAVPEVTVLWASSLWG*GDICGG
Trigger: CCCTCCACAGATGTCCCCCCATCCCCAGAGGCTGGA...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGCACTCCTGGCCACGGTaGGGTTGCCCGAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELHSWPR*GCPSLG
Trigger: ACCCAGACTCGGGCAACCTCACCGTGGCCAGGAGTG...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCATGGGGTGCTCTTGCTaGGGGGCATCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: WLVIRYVMAELRSENSGSMGCSC*GASAER
Trigger: CCTCTCAGCCGATGCCCCTCAGCAAGAGCACCCCAT...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGCGAGGGGCCGCCACCTaGAGATGGGGTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELRGAAT*RWGALA
Trigger: AGCAAGAGCACCCCATCTTCAGGTGGCGGCCCCTCG...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR GCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGTGGGCCTCAACCTCTaGGTAGAAGGCTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRVGLNL*VEGSRL
Trigger: CAGGCGGGAGCCTTCTACGCAGAGGTTGAGGCCCAC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATAGCCTTGCTTTATTCTaGCTCGGGTCGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHSLALF*LGSEAG
Trigger: CCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: REPCFILPRVGGWGSETSTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGGGAGAAGTAGTCACTaGCACCTGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPGRSSH*HLLSFP
Trigger: AGGAAATGACAGCAGGTGCCAGTGACTACTTCTCCC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGACGTCCTCAGCGTAGATaGGTCCGGGACGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRRPQRR*VRDAGR
Trigger: TCGTCCTGCGTCCCGGACCCATCTACGCTGAGGACG...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: CFILPRVGGWGSETSSARLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCTCAAAGCCTTGGGGCTaGGGCTCCGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TCISMTVVAVPEVTVLWASKPWG*GSGALP
Trigger: TGGCAAAGCTCCGGAGCCCCAGCCCCAAGGCTTTGA...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGACTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 72 bp CAGAATGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGTGGAGTTCACTTTCGT +
Preference number: 4 (lower is better)
Translates to: QNVVLVAVLSLQ*RLGDDGGVHFR
Trigger: ACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EPCFILPRVGGWGSETSSNQESR*ETAGFP
Trigger: AGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATT...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGCCACAGCCTCCACGGTaGCCTGGGTCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELPQPPR*PGSLSS
Trigger: GCTACTCAGTGACCCAGGTCACCGTGGAGGCTGTGG...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: SLALFCLGSEAGGARPPVLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR TCA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCATCCGGAAGTGTaGGTGGTTGGTAATTCGATA +
Preference number: 4 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRLHPEV*VVGNSI
Trigger: TATCGAATTACCAACCACTCACACTTCCGGATGGAG...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FGSLALFCLGSEAGGARPKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR GCA 90 bp TGGTTGGTAATTCGATATGTGATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTCCTCAGCCTGCAGTTaGGTCTCGGGGATGACGGTG +
Preference number: 4 (lower is better)
Translates to: WLVIRYVMAELRSENSGSSSACS*VSGMTV
Trigger: CACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGA...GGACCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp CTTAGATGTAGGAGTCATCACCACCGGGCGCATCGTAGGGACCCCCACCCCTCCGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRCRSHHHRAHRRDPHPSGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...GGAGGGGTGGGGGTCCCTACGATGCGCCCGGTGGTGATGACTCCTACATCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR GCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGGTACTGAGCTTGAATaGAGACGTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGGTELE*RRSHLR
Trigger: TCTCAGATGGCTACGTCTGCATTCAAGCTCAGTACC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATGAAATGCAAAGGGGGTaGACAAGGCTCCGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHEMQRG*TRLRGS
Trigger: TGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTC...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: ALLYSASGRRLGERDLQCTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: GALLYSASGRRLGERDLQTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: LALFCLGSEAGGARPPVPTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGCAGAAGGAAGGTCATaGGGCTGGGGACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRAEGRS*GWGHSW
Trigger: CCAGGAGTGTCCCCAGCCCCATGACCTTCCTTCTGC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CGTGTCCTCCTCCACCCTTATCTCCTTGGTCTTAAAGGGGAATTCGGGGGCATTGCAAGGTCGGCCTGTTaGCCCTTCACCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVLLHPYLLGLKGEFGGIARSAC*PFTSRR
Trigger: CCTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGC...AATGCCCCCGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGAGGAGGACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: LYSASGRRLGERDLQCPCIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGACCTCGGAAGTGGTGCTaGTCCAGGGCCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRPRKWC*SRAQLF
Trigger: GAACAACTGGGCCCTGGACCAGCACCACTTCCGAGG...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGGTGACCTGGGTCACTaGGTAGCGGGCAAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VARVWVDDECTIHVSPKDGDLGH*VAGKVG
Trigger: GCCGACCTTGCCCGCTACTCAGTGACCCAGGTCACC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAATGACGACAGGGGACTaGGTGAATGGGACCCCCATG +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRMTTGD*VNGTPM
Trigger: CATGGGGGTCCCATTCACTCAGTCCCCTGTCGTCAT...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGCGTTCAGCACTAGTGTaGCGGTGGCAGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELRSALV*RWQCGW
Trigger: CCAGCCACACTGCCACCGCCACACTAGTGCTGAACG...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GCCTCAGGGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: ASGRDGLHSPGRSSHWHLLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...CAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCCCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: LLYSASGRRLGERDLQCPIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCATCCGGAAGTGTGAGTaGTTGGTAATTCGATATGTG +
Preference number: 4 (lower is better)
Translates to: PCFILPRVGGWGSETSSAIRKCE*LVIRYV
Trigger: CACATATCGAATTACCAACCACTCACACTTCCGGAT...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CCA 90 bp CCCTCCATCCGGAAGTGTGAGTGGTTGGTAATTCGATATGTGATGGCCGAGTTGCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCT +
Preference number: 4 (lower is better)
Translates to: PSIRKCEWLVIRYVMAELPPVPV*WWSAQP
Trigger: AGGTTGTGCTGACCACCACCACACTGGCACAGGCGG...CAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATTGGGGACCTCGGAAGTaGTGCTGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VARVWVDDECTIHVSPKDWGPRK*CWSRAQ
Trigger: CTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCA...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATTGCCTCCCCCAGAGCTaGTCGTGGAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDCLPQS*SWRVPG
Trigger: CCCAGGGACCCTCCACGACCAGCTCTGGGGGAGGCA...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGACCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRPPAAR*HLCSPL
Trigger: TAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGG...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR TCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATCCAGGGTGGGCGCGTTaGGAACGACCACGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDPGWAR*ERPRLP
Trigger: AGGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGG...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATAGGGCTCAGGGGGTCTaGGGACCTCGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDRAQGV*GPRKWC
Trigger: GCACCACTTCCGAGGTCCCCAGACCCCCTGAGCCCT...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATGGGTGTGGACGAGGTTaGTGGCCTCAGAGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VARVWVDDECTIHVSPKDGCGRG*WPQSCA
Trigger: GGCACAACTCTGAGGCCACCAACCTCGTCCACACCC...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATCTAGGCCTCCTGGTCTaGCTCCTGCTCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDLGLLV*LLLRPH
Trigger: GTGTGGCCTGAGCAGGAGCCAGACCAGGAGGCCTAG...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
3UTR CAA 72 bp AGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATGGCCGAGTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: STTSPSIRKCEW*VIRYVMAELRS
Trigger: GGACCTCAACTCGGCCATCACATATCGAATTACCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR TCA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCAAACTTGTATCTCAATaGCTGTGGTTGCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAKLVSQ*LWLRCQ
Trigger: CTGGCACCGCAACCACAGTCATTGAGATACAAGTTT...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp GGCGGGACGGTTTACACTCACCAGGGAGAAGTAGTCACTGGCACCTGCTGTCATACGTTGAGAAACAGCTaGTTTCCCTGGATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: GGTVYTHQGEVVTGTCCHTLRNS*FPWIRN
Trigger: ATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGT...ATGACAGCAGGTGCCAGTGACTACTTCTCCCTGGTGAGTGTAAACCGTCCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGATTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATTCAGGGAGGAACGCCTaGTTGTCAAAGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDSGRNA*LSKPWG
Trigger: GCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGA...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR GCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATCTCAATGACTGTGGTTaGGGTGCCAGAGGTCACCGT +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDLNDCG*GARGHR
Trigger: ACGGTGACCTCTGGCACCGCAACCACAGTCATTGAG...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATAACAGCTGGTTTCCCTaGATCCGAAATGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDNSWFP*IRNAKG
Trigger: CCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTT...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CCA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: VARVWVDDECTIHVSPKDLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CCA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATTTGCCCGAGTCTGGGTaGATGATGAATGTACCATTC +
Preference number: 4 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDLPESG*MMNVPF
Trigger: GAATGGTACATTCATCATCCACCCAGACTCGGGCAA...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: APAQATRRTHPQRASVQVGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCTGGGTTTCGGGAGCCCAAGACCCCATCTaGGCGGCTGTCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: WDPHGPARLPHAMAWVSGAQDPI*AAVTWQ
Trigger: CTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGC...TCCCGAAACCCAGGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: PRVGGWGSETSSARAAGGPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GLSEWDPHGPARLPHAMATTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
71% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRVGGWGSETSSARAAGGGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: APAQATRRTHPQRASVQVRRLGG*HRLLSL
Trigger: GAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRRRLGG*HRLLSL
Trigger: GAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACG...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 5 (lower is better)
Translates to: APAQATRRTHPQRASVQVPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: APAQATRRTHPQRASVQVVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: YSASGRRLGERDLQCPCGTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGAGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LALFCLGSEAGGARPPVPGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWRRLGG*HRLLSL
Trigger: GAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACG...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLSEWDPHGPARLPHAMAPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGAGGAGGGGCAGTCGTTaGGCCCAAGTTGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGRRGSR*AQVGLS
Trigger: ACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCT...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS GCA 90 bp AGCCCCACACCCTTGGAGATGCCCGCCTGCCCTGCCCCGCACCTCTaGGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SPTPLEMPACPAPHL*VEGSRLCQCGGGQH
Trigger: GTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGGCAGGCGGGCATCTCCAAGGGTGTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS-3UTR CAA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAALATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGACTGAGTGAATGGGACCCCCATGGACCCGCGCGCCTGCCCCACGCCATGGCCCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: GLSEWDPHGPARLPHAMARVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...GGCCATGGCGTGGGGCAGGCGCGCGGGTCCATGGGGGTCCCATTCACTCAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: YSASGRRLGERDLQCPCGLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GATGGCCGAGTTGAGGTCCGAGAACTCCGGGTCCTGAGCCTGGATCCTCAGAGGGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DGRVEVRELRVLSLDPQRGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...CCTCTGAGGATCCAGGCTCAGGACCCGGAGTTCTCGGACCTCAACTCGGCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FGSLALFCLGSEAGGARPGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS GCA 90 bp GGCTTCTGCCAAGGGGGCTCCCGCTGGCCGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCGTTTGGCCCAAGTTGGACTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GFCQGGSRWPAGPAH*QKEGQSFGPSWTEC
Trigger: GCACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTGGCAGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS GCA 90 bp CCCGCCTGCCCTGCCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAA +
Preference number: 5 (lower is better)
Translates to: PACPAPHLCVEGSRL*QCGGGQHNLSLHPE
Trigger: TTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGGCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAAVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCCCTCATCGCCGCTGCCGGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALIAAAGVTGAIHVQGGRNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...GCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCCGGCAGCGGCGATGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGGACTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: GGGHCRWFTGSAAALGWGLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...TCCCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAAGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAAPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: FILPRVGGWGSETSSARATTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CFILPRVGGWGSETSSARGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGGGTGCCTCCGCGGGCTaGGGGTCGTGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWGASAG*GSCVGL
Trigger: CAGCCCCACGCACGACCCCAAGCCCGCGGAGGCACC...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp CTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: LPRVGGWGSETSSARAAGWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...CCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS TCA 90 bp GGGCCCAAGACCCCATCTTGGCGGCTGTCACCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGGACTGGCGCAGTTCCTACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: GPKTPSWRLSPGRRV*AGLASRTGAVPTSA
Trigger: CGCTGAGGTAGGAACTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS TCA 90 bp GTGGGCAGGCGCTGGCCCAGGGTCCCCATCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAGCTTCATCCCGAAATGGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VGRRWPRVPIISGQC*GCGPRQLHPEMAQP
Trigger: AGGCTGGGCCATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGATGATGGGGACCCTGGGCCAGCGCCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS CCA 90 bp ATCCTTTACGACCGGCTTCTGCCAAGGGGGCTCCCGCTGGCCGGCTaGTCCAGCCCACTGCCAGAAGGAGGGGCAGTCGTTTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: ILYDRLLPRGLPLAG*SSPLPEGGAVVWPK
Trigger: CTTGGGCCAAACGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS CCA 90 bp CCCCATCTTGGCGGCTGTCACCTGGCAGGAGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAGTTCCTACCTCAGCGACCTTCGCCC +
Preference number: 5 (lower is better)
Translates to: PHLGGCHLAGGSERV*RLGLAQFLPQRPSP
Trigger: GGGCGAAGGTCGCTGAGGTAGGAACTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAAGATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCCCAAGACCCCATCTaGGCGGCTGTCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCAQDPI*AAVTWQ
Trigger: CTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: SASGRRLGERDLQCPCGWPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: FILPRVGGWGSETSSARAGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: LFCLGSEAGGARPPVPVRPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...CCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: CFILPRVGGWGSETSSARTTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCACCACCGAGAAGCGCTaGTCCTCCGAGGGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSATTEKR*SSEGPP
Trigger: TGGCGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGT...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: FILPRVGGWGSETSSARALVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGGGGACGGGCGCCCAGTaGGCCTTGTGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGGTGAQ*ALWSGR
Trigger: CCTCCCTGACCACAAGGCCAACTGGGCGCCCGTCCC...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TGGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: WLLLRPHGAPTPSAPQSRWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...CCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: ALLYSASGRRLGERDLQCGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...GCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGAAGTGCTGCAGCCTaGGGGTGGGGACAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQGSAAA*GWGQRG
Trigger: GCCACGCTGTCCCCACCCCAAGGCTGCAGCACTTCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 5 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCACTGGAGGAGGGGCAGTCGTTaGGCCCAAGTTGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: CSGHTAHPPPARLSPGHWRRGSR*AQVGLS
Trigger: ACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCT...CCAGTGACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633633.1
CDS-3UTR CAA 90 bp TTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGAGGAGGGGCAGTCGTTaGGCCCAAGTTGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: FCLGSEAGGARPPVPVRLRRGSR*AQVGLS
Trigger: ACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCT...CAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS TCA 90 bp TCCTACCTCAGCGACCTTCGCCCCAGCCAGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTCTGCCAAGGGGGCTCCCGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: SYLSDLRPSQTPPSL*SFTTGFCQGGSRWP
Trigger: CGGCCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGTCTGGCTGGGGCGAAGGTCGCTGAGGTAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS TCA 90 bp AGCAGTCTCAGCGACCTTCGCCCCAGCCAGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTCTGCCAAGGGGGCTCCCGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: SSLSDLRPSQTPPSL*SFTTGFCQGGSRWP
Trigger: CGGCCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGTCTGGCTGGGGCGAAGGTCGCTGAGACTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529337.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGCCCAAGACCCCATCTaGGCGGCTGTCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLAQDPI*AAVTWQ
Trigger: CTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCCCAAGACCCCATCTaGGCGGCTGTCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PKCVALGVCIGSSASPGNAQDPI*AAVTWQ
Trigger: CTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: ASGRRLGERDLQCPCGWGSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...CCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAANRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAAYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACTGGTTGTCAAAGCCTaGGGGCTGGGGCTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPLVVKA*GLGLRS
Trigger: GCTCCGGAGCCCCAGCCCCAAGGCTTTGACAACCAG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCGTCGCCTTGGGGGTTaGCATCGGCTCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPRRLGG*HRLLSL
Trigger: GAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCCCAAGTGCGTCGCCTaGGGGGTTTGCATCGGCTCC +
Preference number: 5 (lower is better)
Translates to: PKCVALGVCIGSSASPGNPKCVA*GVCIGS
Trigger: GGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: CFILPRVGGWGSETSSARTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...ACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCAGGAGGGGCAGTCGTTaGGCCCAAGTTGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: YSASGRRLGERDLQCPCGRRGSR*AQVGLS
Trigger: ACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCT...GCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349570.11
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS GCA 90 bp AGACACATCTTTAAGCCCCACACCCTTGGAGATGCCCGCCTGCCCTaGCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: RHIFKPHTLGDARLP*PAPLRRRLPPVPVW
Trigger: CCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGGCAGGCGGGCATCTCCAAGGGTGTGGGGCTTAAAGATGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS CCA 90 bp CCCTGCCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: PCPAPLRRRLPPVPV*WWSAQPLPPSGSVS
Trigger: ACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS CCA 90 bp CTGAGGCCAAGTGGGCAGGCGCTGGCCCAGGGTCCCCATCATCAGTaGTCAGTGCTGAGGGTGTGGGCCCAGGCAGCTTCATCCCGAAAT +
Preference number: 5 (lower is better)
Translates to: LRPSGQALAQGPHHQ*SVLRVWAQAASSRN
Trigger: ATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGATGATGGGGACCCTGGGCCAGCGCCTGCCCACTTGGCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSAVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGCTTTGGGAGCAGCGAGGGGAATGTGTCTCTCACCCCTAGGCCTCCTGGTCTGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: GFGSSEGNVSLTPRPPGLLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CAGACCAGGAGGCCTAGGGGTGAGAGACACATTCCCCTCGCTGCTCCCAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: FGSLALFCLGSEAGGARPGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGGGCAGCTGCATCCTaGACCACAACGCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: EPCFILPRVGGWGSETSSGAAAS*TTTPAP
Trigger: TGGAGCGGGCGTTGTGGTCAAGGATGCAGCTGCCCC...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSAPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTGGTCCAGGGCCCAGTaGTTCCTCCAGCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLWSRAQ*FLQPLW
Trigger: CCACAGAGGCTGGAGGAACAACTGGGCCCTGGACCA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358353.8
CDS-3UTR CAA 90 bp CGGCCTGTTGGCCCTTCACCAGCAGAAGGAAGGTCATGGGGCTGGGGACACTCCCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: RPVGPSPAEGRSWGWGHSRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...GGAGTGTCCCCAGCCCCATGACCTTCCTTCTGCTGGTGAAGGGCCAACAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSAGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGGGAGGAACGCCTGGTaGTCAAAGCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPGRNAW*SKPWGW
Trigger: CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCC...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGCACCACGTTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATTCCAGGGTGGGCGCGTaGAGAACGACCACGTCTGCC +
Preference number: 5 (lower is better)
Translates to: RAPRSALVWRWQCGWVPHSRVGA*RTTTSA
Trigger: GGCAGACGTGGTCGTTCTCAACGCGCCCACCCTGGA...ATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAACGTGGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCACCCCCGGCAGGTGTTaGAGACCACCGGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FREPCFILPRVGGWGSETTPGRC*RPPAPK
Trigger: CTTGGGAGCCGGTGGTCTCAAACACCTGCCGGGGGT...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCGCCGCAAGGGATCCCTaGATGGTTCTGGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSAAARDP*MVLGMG
Trigger: GCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGC...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATGCCGCAAGGGATCCCTaGATGGTTCTGGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PKCVALGVCIGSSASPGNAARDP*MVLGMG
Trigger: GCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGC...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS CCA 90 bp CCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTGGTaGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: PAPLRRRLPPVPVWW*SAQPLPPSGSVSGW
Trigger: CCAACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS CCA 90 bp TGCCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTGGTaGTGGTCAGCACAACCTCTCCCTCCATCCGGAAGTGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: CPAPLRRRLPPVPVW*WSAQPLPPSGSVSG
Trigger: ACCACTCACACTTCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS-3UTR CAA 90 bp GGCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: GSCSGHTAHPPPARLSPGSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...ACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FILPRVGGWGSETSSARANRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CAGGTGTTTGAGACCACCGGCTCCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QVFETTGSQVRRLGGLHRGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...CCGATGCAAACCCCCAAGGCGACGCACTTGGGAGCCGGTGGTCTCAAACACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGGACGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: PRVGGWGSETSSARAAGGRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...TCCCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: FREPCFILPRVGGWGSETPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: EPCFILPRVGGWGSETSSPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAGGTCACCGTGTaGTGGGCCTCAACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: FGSLALFCLGSEAGGARPPEVTV*WASTSA
Trigger: CGCAGAGGTTGAGGCCCACAACACGGTGACCTCTGG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp TGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTGGGGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: CLGSEAGGARPPVPVRLGLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CCCCAGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGGGTGTGGACGAGGTaGGTGGCCTCAGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRVWTR*VASELC
Trigger: GCACAACTCTGAGGCCACCAACCTCGTCCACACCCG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS CCA 90 bp ATCCGAAATGCAAAGGGGGTGGACAAGGCTCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATGTCCACCAGCGGCTCGGTGACATTT +
Preference number: 5 (lower is better)
Translates to: IRNAKGVDKAPRVTS*PSGTWMSTSGSVTF
Trigger: AAATGTCACCGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531177.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000631565.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTCAGCACTAGTGTGGCGGTGGCAGTGTGGCTGGGTTCCACATTCTCCCCCGGAGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGT +
Preference number: 5 (lower is better)
Translates to: FSTSVAVAVWLGSTFSPGVLSLQ*RLGDDG
Trigger: ACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGAC...TCCGGGGGAGAATGTGGAACCCAGCCACACTGCCACCGCCACACTAGTGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSANRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: REPCFILPRVGGWGSETSPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...GGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGTCACTGGCGCCATCCACGTCCAGGGTGGGCGCGTTGAGAACGACCACGTCCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: GVTGAIHVQGGRVENDHVPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...GACGTGGTCGTTCTCAACGCGCCCACCCTGGACGTGGATGGCGCCAGTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCATATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GCTCCTGCTCAGGCCACACGGCGCACCCACCCCCAGCGCGCCTCAGTCCAGGTCCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: APAQATRRTHPQRASVQVLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...GACCTGGACTGAGGCGCGCTGGGGGTGGGTGCGCCGTGTGGCCTGAGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp ATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGGCTTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: ILPRVGGWGSETSSARAASTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...AGCCGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCAACAGAATGTCGTCCTaGTCGCGGTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FREPCFILPRVGGWGSETNRMSS*SRSSAC
Trigger: GCAGGCTGAGGACCGCGACAAGGACGACATTCTGTT...GGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp CCGCCCAGGGCCGCCATATCCACCACCGAGAAGCGCTTGTCCTCCGAGGGGCCGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: PPRAAISTTEKRLSSEGPLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CGGCCCCTCGGAGGACAAGCGCTTCTCGGTGGTGGATATGGCGGCCCTGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS TCA 90 bp TGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTTGCGTCTCGGGGATaGCGGTGGAGTTCACTTTCGTGTCCAATGTGCCTCCGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: CRPCRGPQPAVASRG*RWSSLSCPMCLRSD
Trigger: GTCAGAGCGGAGGCACATTGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526077.5
ENST00000531899.5
ENST00000632059.1
ENST00000632429.1
CDS-3UTR CAA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGCCCAAGACCCCATCTaGGCGGCTGTCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAAQDPI*AAVTWQ
Trigger: CTGCCAGGTGACAGCCGCCAAGATGGGGTCTTGGGC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGTATGTGATGGCCGAGTaGAGGTCCGAGAACTCCGGG +
Preference number: 5 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWYVMAE*RSENSG
Trigger: CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATA...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCTCTGTGTAGGGTGGGTTTCGGGAGCCTaGCTTTATTCTGCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: ALGVCIGSSASPGNLCVGWVSGA*LYSASG
Trigger: ACCCGAGGCAGAATAAAGCAAGGCTCCCGAAACCCA...CCCTACACAGAGATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: ALFCLGSEAGGARPPVPVSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...CACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CAGTTGGCCTTGTGGTCAGGGAGGAACGCCTGGTTGTCAAAGCCTTGGGGCTGGCCCGTGGTACTGAGCTaGAATGCAGACGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: QLALWSGRNAWLSKPWGWPVVLS*NADVAI
Trigger: GATGGCTACGTCTGCATTCAAGCTCAGTACCACGGG...CCAGCCCCAAGGCTTTGACAACCAGGCGTTCCTCCCTGACCACAAGGCCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp ACTTGTATCTCAATGACTGTGGTTGCGGTGCCAGAGGTCACCGTGTTGTGGGCCGGCAAGGTCGGCCTGTaGGCCCTTCACCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TCISMTVVAVPEVTVLWAGKVGL*ALHQQK
Trigger: CTTCTGCTGGTGAAGGGCCAACAGGCCGACCTTGCC...GGCCCACAACACGGTGACCTCTGGCACCGCAACCACAGTCATTGAGATACAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS CCA 90 bp GTGGTCAGTGCTGAGGGTGTGGGCCCAGGCAGCTTCATCCCGAAATaGCCCAGCCTTCTCGTAATCAGGAGTCACGTTGAGAAACAGCTG +
Preference number: 5 (lower is better)
Translates to: VVSAEGVGPGSFIPK*PSLLVIRSHVEKQL
Trigger: CAGCTGTTTCTCAACGTGACTCCTGATTACGAGAAGGCTGGGCCATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp GCAAGGGATCCCTTGATGGTTCTGGGCATGGGCGCCCAGCCTGGGCTCTGGCTTTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: ARDPLMVLGMGAQPGLWLSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...AAGCCAGAGCCCAGGCTGGGCGCCCATGCCCAGAACCATCAAGGGATCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSASTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: LYSASGRRLGERDLQCPCRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...GCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp AAGGCGGCGGGCACTGCAGGTGGTTTACGGGAAGTGCTGCAGCCTTGGGGTGGGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: KAAGTAGGLREVLQPWGGLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CCCACCCCAAGGCTGCAGCACTTCCCGTAAACCACCTGCAGTGCCCGCCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GGCTCAGGGGGTCTGGGGACCTCGGAAGTGGTGCTGGTCCAGGGCCCAGTTGTTCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: GSGGLGTSEVVLVQGPVVLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...AACAACTGGGCCCTGGACCAGCACCACTTCCGAGGTCCCCAGACCCCCTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS-3UTR CAA 90 bp TTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGTGCGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: FILPRVGGWGSETSSARALLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CGCACGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp ACCCAAGCATGTAGATTTCAGAAGGGGACTAGGACCCCCGGCAGGTGTTTGAGAGCCGCAAGGGATCCCTaGATGGTTCTGGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: TQACRFQKGTRTPGRCLRAARDP*MVLGMG
Trigger: GCCCATGCCCAGAACCATCAAGGGATCCCTTGCGGC...TCTCAAACACCTGCCGGGGGTCCTAGTCCCCTTCTGAAATCTACATGCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp GAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTTCCACCCTTATCTCCTaGGTCTTAAAGGGGAATTCG +
Preference number: 5 (lower is better)
Translates to: EPCFILPRVGGWGSETSSSTLIS*VLKGNS
Trigger: CGAATTCCCCTTTAAGACCAAGGAGATAAGGGTGGA...ACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCACGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: GSLALFCLGSEAGGARPPRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...TGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp GGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: GALLYSASGRRLGERDLQRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...CTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: SGALLYSASGRRLGERDLRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...GAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp CCCAAGTGCGTCGCCTTGGGGGTTTGCATCGGCTCCTCAGCCTCCCCAGGCAATCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: PKCVALGVCIGSSASPGNRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...ATTGCCTGGGGAGGCTGAGGAGCCGATGCAAACCCCCAAGGCGACGCACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS-3UTR CAA 90 bp TTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCGCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: LLYSASGRRLGERDLQCPLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...CGGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: PCFILPRVGGWGSETSSALLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...GGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp CTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCCCCTCCTGTTCGGAAACTaGTATCTCAATGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: LALFCLGSEAGGARPPVPLLFGN*YLNDCG
Trigger: ACCACAGTCATTGAGATACAAGTTTCCGAACAGGAG...GGGCACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp AGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCCAGTGCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: SLALFCLGSEAGGARPPVRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...CACTGGAGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
ENST00000674088.1
CDS-3UTR CAA 90 bp TTCGGGAGCCTTGCTTTATTCTGCCTCGGGTCGGAGGCTGGGGGAGCGAGACCTCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: FGSLALFCLGSEAGGARPRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...AGGTCTCGCTCCCCCAGCCTCCGACCCGAGGCAGAATAAAGCAAGGCTCCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000531177.5
ENST00000617105.3
ENST00000619215.2
ENST00000631565.1
ENST00000633633.1
CDS-3UTR CAA 90 bp AATGGTGTATTTCCATTAGGGAAAGTGCTGACAAGCCGCAAGGGATCCCTTGATCTGGCCACGGTGAGGTaGCCCGAGTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: NGVFPLGKVLTSRKGSLDLATVR*PESGWM
Trigger: CATCCACCCAGACTCGGGCAACCTCACCGTGGCCAG...ATCAAGGGATCCCTTGCGGCTTGTCAGCACTTTCCCTAATGGAAATACACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358353.8
ENST00000397542.7
ENST00000617105.3
ENST00000633633.1
CDS TCA 90 bp GCTGAGCCTCAAGCAGTGACTTCTCCTCGTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCTGGATCCGAAATGCAAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AEPQAVTSPRNQESR*ETAGFPGSEMQRGW
Trigger: CCACCCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS TCA 90 bp CTTCATCCCGAAATGGCCCAGCCTTCTCGTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCTGGATCCGAAATGCAAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LHPEMAQPSRNQESR*ETAGFPGSEMQRGW
Trigger: CCACCCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATTACGAGAAGGCTGGGCCATTTCGGGATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS TCA 90 bp GGTCAATGTGCCTCCGCTCTGACACAGCAGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGGAGTCACGTTGAGAAACAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GQCASALTQQLSLKQ*LLLVIRSHVEKQLV
Trigger: AACCAGCTGTTTCTCAACGTGACTCCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAGCTGCTGTGTCAGAGCGGAGGCACATTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534311.1
ENST00000631535.1
CDS GCA 90 bp AGTTCACTTTCGTGTCCTCCTCCACCCTTATCTCCTTGGTCAATGTaGCTCCGCTCTGACACAGCAGCTGAGCCTCAAGCAGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: SSLSCPPPPLSPWSM*LRSDTAAEPQAVTS
Trigger: AGAAGTCACTGCTTGAGGCTCAGCTGCTGTGTCAGAGCGGAGGCACATTGACCAAGGAGATAAGGGTGGAGGAGGACACGAAAGTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534311.1
ENST00000631535.1
CDS-3UTR CAA 90 bp GTTGCCCGAGTCTGGGTGGATGATGAATGTACCATTCACGTTTCCCCTAAAGATCGGAAGTGTGAGTGGTaGGTAATTCGATATGTGATG +
Preference number: 5 (lower is better)
Translates to: VARVWVDDECTIHVSPKDRKCEW*VIRYVM
Trigger: CATCACATATCGAATTACCAACCACTCACACTTCCG...ATCTTTAGGGGAAACGTGAATGGTACATTCATCATCCACCCAGACTCGGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS GCA 72 bp CAAGGGGGCTCCCGCTGGCCGGCTGGTCCAGCCCACTaGCAGAAGGAGGGGCAGTCGTTTGGCCCAAGTTGG +
Preference number: 6 (lower is better)
Translates to: QGGSRWPAGPAH*QKEGQSFGPSW
Trigger: CCAACTTGGGCCAAACGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS CCA 72 bp GCAAAGGGGGTGGACAAGGCTCCGAGGGTCACCTCCTaGCCCTCCGGGACGTGGATGTCCACCAGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: AKGVDKAPRVTS*PSGTWMSTSGS
Trigger: CGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGGAGCCTTGTCCACCCCCTTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531177.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000631565.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS CCA 72 bp TCCTTTACGACCGGCTTCTGCCAAGGGGGCTCCCGCTaGCCGGCTGGTCCAGCCCACTGCCAGAAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SFTTGFCQGGSR*PAGPAHCQKEG
Trigger: CCCCTCCTTCTGGCAGTGGGCTGGACCAGCCGGCCAGCGGGAGCCCCCTTGGCAGAAGCCGGTCGTAAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS GCA 72 bp CCTGCCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTaGCAGTGTGGTGGTGGTCAGCACAACCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PAPHLCVEGSRL*QCGGGQHNLSL
Trigger: GAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS GCA 72 bp TTTAAGCCCCACACCCTTGGAGATGCCCGCCTGCCCTaGCCCGCACCTCTGCGTAGAAGGCTCCCGCCTGTG +
Preference number: 6 (lower is better)
Translates to: FKPHTLGDARLP*PAPLRRRLPPV
Trigger: CACAGGCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGGCAGGCGGGCATCTCCAAGGGTGTGGGGCTTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS CCA 72 bp GGCGGCTGTCACCTGGCAGGAGGGTCTGAGCGGGTCTaGCGTCTAGGACTGGCGCAGTTCCTACCTCAGCGA +
Preference number: 6 (lower is better)
Translates to: GGCHLAGGSERV*RLGLAQFLPQR
Trigger: TCGCTGAGGTAGGAACTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS CCA 72 bp AGTGGGCAGGCGCTGGCCCAGGGTCCCCATCATCAGTaGTCAGTGCTGAGGGTGTGGGCCCAGGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SGQALAQGPHHQ*SVLRVWAQAAS
Trigger: TGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGATGATGGGGACCCTGGGCCAGCGCCTGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS TCA 72 bp ACCCCATCTTGGCGGCTGTCACCTGGCAGGAGGGTCTaGGCGGGTCTGGCGTCTAGGACTGGCGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: TPSWRLSPGRRV*AGLASRTGAVP
Trigger: AGGAACTGCGCCAGTCCTAGACGCCAGACCCGCTCAGACCCTCCTGCCAGGTGACAGCCGCCAAGATGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS GCA 72 bp ACATCTTTAAGCCCCACACCCTTGGAGATGCCCGCCTaGCCTGCCCCGCACCTCTGCGTAGAAGGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: TSLSPTPLEMPA*PAPHLCVEGSR
Trigger: GCGGGAGCCTTCTACGCAGAGGTGCGGGGCAGGGCAGGCGGGCATCTCCAAGGGTGTGGGGCTTAAAGATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS TCA 72 bp AGCGACCTTCGCCCCAGCCAGACGCCGCCCAGTTTATaGTCCTTTACGACCGGCTTCTGCCAAGGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SDLRPSQTPPSL*SFTTGFCQGGS
Trigger: GGAGCCCCCTTGGCAGAAGCCGGTCGTAAAGGATCATAAACTGGGCGGCGTCTGGCTGGGGCGAAGGTCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000617105.3
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS TCA 72 bp CGCTGGCCCAGGGTCCCCATCATCAGTGGTCAGTGCTaGGGGTGTGGGCCCAGGCAGCTTCATCCCGAAATG +
Preference number: 6 (lower is better)
Translates to: RWPRVPIISGQC*GCGPRQLHPEM
Trigger: CATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGATGATGGGGACCCTGGGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS CCA 72 bp AAGGCTCCGAGGGTCACCTCCTGGCCCTCCGGGACGTaGATGTCCACCAGCGGCTCGGTGACATTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: KAPRVTSWPSGT*MSTSGSVTFVF
Trigger: GAACACAAATGTCACCGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCCAGGAGGTGACCCTCGGAGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531177.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000631565.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS CCA 72 bp GCACCTCTGCGTAGAAGGCTCCCGCCTGTGCCAGTGTaGTGGTGGTCAGCACAACCTCTCCCTCCATCCGGA +
Preference number: 6 (lower is better)
Translates to: APLRRRLPPVPV*WWSAQPLPPSG
Trigger: TCCGGATGGAGGGAGAGGTTGTGCTGACCACCACCACACTGGCACAGGCGGGAGCCTTCTACGCAGAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531899.5
ENST00000632429.1
CDS CCA 72 bp CAGGGTCCCCATCATCAGTGGTCAGTGCTGAGGGTGTaGGCCCAGGCAGCTTCATCCCGAAATGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: QGPHHQWSVLRV*AQAASSRNGPA
Trigger: GGCTGGGCCATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGATGATGGGGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS CAA 72 bp CTGGTCCAGCCCACTGCCAGAAGGAGGGGCAGTCGTTaGGCCCAAGTTGGACTGAGTGCAGGGGTCAACCAG +
Preference number: 6 (lower is better)
Translates to: LVQPTARRRGSR*AQVGLSAGVNQ
Trigger: CTGGTTGACCCCTGCACTCAGTCCAACTTGGGCCAAACGACTGCCCCTCCTTCTGGCAGTGGGCTGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349570.11
ENST00000529337.1
ENST00000619215.2
ENST00000633633.1
ENST00000674088.1
CDS CCA 72 bp GCTGAGGGTGTGGGCCCAGGCAGCTTCATCCCGAAATaGCCCAGCCTTCTCGTAATCAGGAGTCACGTTGAG +
Preference number: 6 (lower is better)
Translates to: AEGVGPGSFIPK*PSLLVIRSHVE
Trigger: CTCAACGTGACTCCTGATTACGAGAAGGCTGGGCCATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS TCA 72 bp GGCCCTCCGGGACGTGGATGTCCACCAGCGGCTCGGTaGCATTTGTGTTCTCCTCTACTTCAAAGATGTCCT +
Preference number: 6 (lower is better)
Translates to: GPPGRGCPPAAR*HLCSPLLQRCP
Trigger: AGGACATCTTTGAAGTAGAGGAGAACACAAATGTCACCGAGCCGCTGGTGGACATCCACGTCCCGGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531177.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000631565.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS GCA 72 bp CACGTTGAGAAACAGCTGGTTTCCCTGGATCCGAAATaGAAAGGGGGTGGACAAGGCTCCGAGGGTCACCTC +
Preference number: 6 (lower is better)
Translates to: HVEKQLVSLDPK*KGGGQGSEGHL
Trigger: GAGGTGACCCTCGGAGCCTTGTCCACCCCCTTTGCATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531177.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000631565.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS GCA 72 bp TCGTGTCCTCCTCCACCCTTATCTCCTTGGTCAATGTaGCTCCGCTCTGACACAGCAGCTGAGCCTCAAGCA +
Preference number: 6 (lower is better)
Translates to: SCPPPPLSPWSM*LRSDTAAEPQA
Trigger: TGCTTGAGGCTCAGCTGCTGTGTCAGAGCGGAGGCACATTGACCAAGGAGATAAGGGTGGAGGAGGACACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534311.1
ENST00000631535.1
CDS CAA 90 bp GGTGTAGAACAGAATGTCGTCCTTGTCGCGGTCCTCAGCCTGCAGTaGCGTCTCGGGGATGACGGTGGAGTTCACTTTCGTGTCCAATGT +
Preference number: 6 (lower is better)
Translates to: GVEQNVVLVAVLSLQ*RLGDDGGVHFRVQC
Trigger: ACATTGGACACGAAAGTGAACTCCACCGTCATCCCCGAGACGCAACTGCAGGCTGAGGACCGCGACAAGGACGACATTCTGTTCTACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526077.5
ENST00000531899.5
ENST00000632059.1
ENST00000632429.1
CDS TCA 72 bp GCCTCCGCTCTGACACAGCAGCTGAGCCTCAAGCAGTaGCTTCTCCTCGTAATCAGGAGTCACGTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: ASALTQQLSLKQ*LLLVIRSHVEK
Trigger: TTTCTCAACGTGACTCCTGATTACGAGGAGAAGTCACTGCTTGAGGCTCAGCTGCTGTGTCAGAGCGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1
CDS TCA 72 bp GAAATGGCCCAGCCTTCTCGTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCTGGATCCGAAATGCAA +
Preference number: 6 (lower is better)
Translates to: EMAQPSRNQESR*ETAGFPGSEMQ
Trigger: TTGCATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATTACGAGAAGGCTGGGCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531177.5
ENST00000631565.1
CDS CAA 72 bp GTGACATTTGTGTTCTCCTCTACTTCAAAGATGTCCTaGTTCACAGAGCAGTCTCAGCGACCTTCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: VTFVFSSTSKMS*FTEQSQRPSPQ
Trigger: CTGGGGCGAAGGTCGCTGAGACTGCTCTGTGAACAAGGACATCTTTGAAGTAGAGGAGAACACAAATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529337.1
CDS TCA 72 bp CAAGCAGTGACTTCTCCTCGTAATCAGGAGTCACGTTaGGAAACAGCTGGTTTCCCTGGATCCGAAATGCAA +
Preference number: 6 (lower is better)
Translates to: QAVTSPRNQESR*ETAGFPGSEMQ
Trigger: TTGCATTTCGGATCCAGGGAAACCAGCTGTTTCTCAACGTGACTCCTGATTACGAGGAGAAGTCACTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000349570.11
ENST00000358353.8
ENST00000397542.7
ENST00000526077.5
ENST00000529337.1
ENST00000531088.5
ENST00000531899.5
ENST00000534311.1
ENST00000617105.3
ENST00000619215.2
ENST00000631535.1
ENST00000632059.1
ENST00000632429.1
ENST00000633633.1
ENST00000634167.1
ENST00000674088.1