RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDHR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000128536

Ensembl transcript IDs: ENST00000317716.14, ENST00000461766.1, ENST00000466045.1, ENST00000466351.1, ENST00000468143.1, ENST00000468477.1, ENST00000470188.5, ENST00000471910.1, ENST00000472116.1, ENST00000474330.1, ENST00000478080.5, ENST00000487084.1, ENST00000488386.5, ENST00000496633.1

Found 579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGACCTGGTAGGCTCTCACCTGACTCCCCAGTTGGGAAGGGAGTaGTTCCCTAATGAACACTCACCTGGACCTTTCTTAGGGTTACTG +
Preference number: 1 (lower is better)
Translates to: VDLVGSHLTPQLGRE*FPNEHSPGPFLGLL
Trigger: CAGTAACCCTAAGAAAGGTCCAGGTGAGTGTTCATTAGGGAAGCACTCCCTTCCCAACTGGGGAGTCAGGTGAGAGCCTACCAGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 90 bp CCTCCTGGCGCACTCTTGCCCCTATTTCTTGAGTTTCTCGAGGCTTaGCTTGCGACTAGGAAGACACTCAGCTCTTCCTGCCTATCACCA +
Preference number: 1 (lower is better)
Translates to: PPGALLPLFLEFLEA*LATRKTLSSSCLSP
Trigger: TGGTGATAGGCAGGAAGAGCTGAGTGTCTTCCTAGTCGCAAGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAGAGTGCGCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 90 bp GGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTaGTTGCTACACAGGCTGAGTTTCAGACCCTGCTTTCTAATGAGC +
Preference number: 1 (lower is better)
Translates to: GEQKCHFPVLLVSHP*LLHRLSFRPCFLMS
Trigger: GCTCATTAGAAAGCAGGGTCTGAAACTCAGCCTGTGTAGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp TATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTaGGAAGGAGCAAGGCAGGTAGGTTGTAAGGCTGATGGTGTTTCA +
Preference number: 1 (lower is better)
Translates to: YVPTQSPAVPSNHRK*EGARQVGCKADGVS
Trigger: TGAAACACCATCAGCCTTACAACCTACCTGCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGGGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp TCATTGCTCATGCCTACAGGTGGAAGTCTGAGTTTTATGTCTAGATaGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: SLLMPTGGSLSFMSR*GFQYVPTQSPAVPS
Trigger: GGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACATAAAACTCAGACTTCCACCTGTAGGCATGAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp TTACTTTCCTGGGTGTGGTTTGGGGTAAGCCCTGTTCATGAAGGCTaGATTTCTGTTCTTTGGGTTGCCCAGCTTGCCACCCTCATTTCT +
Preference number: 1 (lower is better)
Translates to: LLSWVWFGVSPVHEG*ISVLWVAQLATLIS
Trigger: AGAAATGAGGGTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCAGCCTTCATGAACAGGGCTTACCCCAAACCACACCCAGGAAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR CCA 90 bp ACCAATTGTGGTCCACTACTTCATTTCCATGAGGTGAGCATGAAGTaGCCAAGGGGAAACCTCCAAGGGGTATTTGGACTGAGAAGACTG +
Preference number: 1 (lower is better)
Translates to: TNCGPLLHFHEVSMK*PRGNLQGVFGLRRL
Trigger: CAGTCTTCTCAGTCCAAATACCCCTTGGAGGTTTCCCCTTGGCCACTTCATGCTCACCTCATGGAAATGAAGTAGTGGACCACAATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 90 bp AACCTGGTCAACGCTGGGAAATTGGCTGTCTGTAACCAATCAGACTaGTTGCCAGCCGAGTCTTCGTTGCAACGTTGTAACTTCACCTTA +
Preference number: 1 (lower is better)
Translates to: NLVNAGKLAVCNQSD*LPAESSLQRCNFTL
Trigger: TAAGGTGAAGTTACAACGTTGCAACGAAGACTCGGCTGGCAATCAGTCTGATTGGTTACAGACAGCCAATTTCCCAGCGTTGACCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 90 bp TCGTTGACGTCTTCCACAATGAAGGTTATCTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCCTTCACTAGAACTTCCAGGGAAATG +
Preference number: 1 (lower is better)
Translates to: SLTSSTMKVIWMRFS*PPYGLSFTRTSREM
Trigger: CATTTCCCTGGAAGTTCTAGTGAAGGACAGACCATATGGGGGTCAGGAGAATCGCATCCAGATAACCTTCATTGTGGAAGACGTCAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR GCA 90 bp AGCTTCCAAGGAAAGCATTTGACTCCGGGCCCCACAGATTTGCAATaGCTTAAATGGGCAATCAGCCACTTCACTCACTTTAACCTGCAT +
Preference number: 1 (lower is better)
Translates to: SFQGKHLTPGPTDLQ*LKWAISHFTHFNLH
Trigger: ATGCAGGTTAAAGTGAGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 90 bp CTTGTGAGCCACCCGTGCTTGCTACACAGGCTGAGTTTCAGACCCTaGTTTCTAATGAGCACAACAAAAAGCTCCAATGTCACAATCTAC +
Preference number: 1 (lower is better)
Translates to: LVSHPCLLHRLSFRP*FLMSTTKSSNVTIY
Trigger: GTAGATTGTGACATTGGAGCTTTTTGTTGTGCTCATTAGAAAGCAGGGTCTGAAACTCAGCCTGTGTAGCAAGCACGGGTGGCTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp GTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTCCCACACTGTaGAGTGTACTTTGGTTTTCAATAAATCCCTGCTTTCATTCTTTC +
Preference number: 1 (lower is better)
Translates to: VSGPLSHLLRPVPTL*SVLWFSINPCFHSF
Trigger: GAAAGAATGAAAGCAGGGATTTATTGAAAACCAAAGTACACTCCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp GCCGAGTCTTCGTTGCAACGTTGTAACTTCACCTTAGCCTCTGATTaGTTGCTTTTTGCAACCAATCAGATGTTTGCACAGGAGCGTGAC +
Preference number: 1 (lower is better)
Translates to: AESSLQRCNFTLASD*LLFATNQMFAQERD
Trigger: GTCACGCTCCTGTGCAAACATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACGTTGCAACGAAGACTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp CCTGACCCCCATATGGTCTGTCCTTCACTAGAACTTCCAGGGAAATaGTGGGATTTTGTCTCAATTCACCTGCATCTCGGTCTATCCTTT +
Preference number: 1 (lower is better)
Translates to: PDPHMVCPSLELPGK*WDFVSIHLHLGLSF
Trigger: AAAGGATAGACCGAGATGCAGGTGAATTGAGACAAAATCCCACCATTTCCCTGGAAGTTCTAGTGAAGGACAGACCATATGGGGGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR CCA 90 bp TTTGCACAGGAGCGTGACCTTTGTAACTCCACTTCAGTCTCTGATTaGTTGCTTCCTGCAACCAATCAGACCAATTGTGGTCCACTACTT +
Preference number: 1 (lower is better)
Translates to: FAQERDLCNSTSVSD*LLPATNQTNCGPLL
Trigger: AAGTAGTGGACCACAATTGGTCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGTCACGCTCCTGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 90 bp CTCATTTTACTTGCATTGAAGCTGAGAGCTTCCAAGGAAAGCATTTaGCTCCGGGCCCCACAGATTTGCAATGCCTTAAATGGGCAATCA +
Preference number: 1 (lower is better)
Translates to: LILLALKLRASKESI*LRAPQICNALNGQS
Trigger: TGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAAGCTCTCAGCTTCAATGCAAGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp TTGAGTCACTTGCTCAGGCCCGTTCCCACACTGTGGAGTGTACTTTaGTTTTCAATAAATCCCTGCTTTCATTCTTTCGTTGCCTCATTC +
Preference number: 1 (lower is better)
Translates to: LSHLLRPVPTLWSVL*FSINPCFHSFVASF
Trigger: GAATGAGGCAACGAAAGAATGAAAGCAGGGATTTATTGAAAACCAAAGTACACTCCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 90 bp CCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTaGAAATGCTTCTTTTGCTTGAGAAGTGACACTGGCACTAGGCAC +
Preference number: 1 (lower is better)
Translates to: PLLINHAQSRPGQAF*KCFFCLRSDTGTRH
Trigger: GTGCCTAGTGCCAGTGTCACTTCTCAAGCAAAAGAAGCATTTGCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 90 bp TTGGCTATAATCAACTCATACCTGTTTAAGGCCTTGAGAGGGAGATaGGAGAAAACTTTCACCAAATCCACGACGGTTGCTGTCTTCATT +
Preference number: 1 (lower is better)
Translates to: LAIINSYLFKALRGR*EKTFTKSTTVAVFI
Trigger: AATGAAGACAGCAACCGTCGTGGATTTGGTGAAAGTTTTCTCCCATCTCCCTCTCAAGGCCTTAAACAGGTATGAGTTGATTATAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 90 bp TACAAACTTTCTATGGTGAACAGAATAGAGCTTCCTAGCAGTCAATaGAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTC +
Preference number: 1 (lower is better)
Translates to: YKLSMVNRIELPSSQ*KEETQQFHTPKLTV
Trigger: GACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCATTGACTGCTAGGAAGCTCTATTCTGTTCACCATAGAAAGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR CAA 90 bp CCACAGGACCTTGTGGACCTGGTAGGCTCTCACCTGACTCCCCAGTaGGGAAGGGAGTGCTTCCCTAATGAACACTCACCTGGACCTTTC +
Preference number: 2 (lower is better)
Translates to: PQDLVDLVGSHLTPQ*GRECFPNEHSPGPF
Trigger: GAAAGGTCCAGGTGAGTGTTCATTAGGGAAGCACTCCCTTCCCAACTGGGGAGTCAGGTGAGAGCCTACCAGGTCCACAAGGTCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp GGCAGCAGGTGTTCTCTCCTCCTGGCGCACTCTTGCCCCTATTTCTaGAGTTTCTCGAGGCTTGCCTTGCGACTAGGAAGACACTCAGCT +
Preference number: 2 (lower is better)
Translates to: GSRCSLLLAHSCPYF*SFSRLALRLGRHSA
Trigger: AGCTGAGTGTCTTCCTAGTCGCAAGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAGAGTGCGCCAGGAGGAGAGAACACCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR GCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTGCAATCTCAGCCCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGGGCTGAGATTGC...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCGAGGCAGCATCTCAGTaGTTGACAGGCCCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTEAASQ*LTGPSL
Trigger: TAAGGAGGGGCCTGTCAATCACTGAGATGCTGCCTC...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CTTGGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGGCTGGGAAAACCCAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTC +
Preference number: 2 (lower is better)
Translates to: LGLYQSSGNAVEEVAGKTQDPPL*YWPRWF
Trigger: GAACCATCGTGGCCAATATCACAGCGGAGGATCCTG...GGTTTTCCCAGCCACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
3UTR-3UTR CCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCGTGATCTGCCCACCTTaGCAAAGTGCTGGCATTACA +
Preference number: 2 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGVICPP*QSAGIT
Trigger: TGTAATGCCAGCACTTTGCCAAGGTGGGCAGATCAC...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCCTTGCCCCTATTTCTTaGGTTTCTCGAGGCTTGCCT +
Preference number: 2 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLLAPIS*VSRGLP
Trigger: AGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAG...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp TCTTTCCGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SFRHHNAEGELLACGRIVWMRFS*PPYGLS
Trigger: GGACAGACCATATGGGGGTCAGGAGAATCGCATCCA...GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR CCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCCTCAGTGTTTGCTGCTaGAATGTGAATCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGLSVCC*NVNQSH
Trigger: GTGGCTCTGATTCACATTCCAGCAGCAAACACTGAG...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTCAACGCTGGGAAATTaGCTGTCTGTAACCAATCAG +
Preference number: 2 (lower is better)
Translates to: WGAEVSFPSSACEPPVLASTLGN*LSVTNQ
Trigger: CTGATTGGTTACAGACAGCCAATTTCCCAGCGTTGA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp CTGCTGCCGCTCCCCACTCCAGATGGCATGGTGAAGTTGAATCTGTaGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTTGTTTAGG +
Preference number: 2 (lower is better)
Translates to: LLPLPTPDGMVKLNL*FGASLSSSKQNLFR
Trigger: CCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATGCCATCTGGAGTGGGGAGCGGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR GCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTGCAAATGCTTCTTTTaGTTGAGAAGTGACACTGGC +
Preference number: 2 (lower is better)
Translates to: WGAEVSFPSSACEPPVLACKCFF*LRSDTG
Trigger: GCCAGTGTCACTTCTCAAGCAAAAGAAGCATTTGCA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp GCTGAGAGCTTCCAAGGAAAGCATTTGACTCCGGGCCCCACAGATTaGCAATGCCTTAAATGGGCAATCAGCCACTTCACTCACTTTAAC +
Preference number: 2 (lower is better)
Translates to: AESFQGKHLTPGPTD*QCLKWAISHFTHFN
Trigger: GTTAAAGTGAGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAAGCTCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCTTTGCTGCTGGAATGTaGATCAGAGCCACCACTTTG +
Preference number: 2 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTFAAGM*IRATTL
Trigger: CAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAA...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTCTACAGGTGGAAGTCTaGGTTTTATGTCTAGATGGG +
Preference number: 2 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVLQVEV*VLCLDG
Trigger: CCCATCTAGACATAAAACTCAGACTTCCACCTGTAG...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp TCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCATTCCATTTTGGCATTTaGGTTAGTGGATCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SFLEPRPASSAHALPLSSFHFGI*VSGSFH
Trigger: GTGGAAAGATCCACTAACCCAAATGCCAAAATGGAA...TGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR CAA 90 bp GCTCAATCTAGGCCAGGACAGGCATTTTGCAAATGCTTCTTTTGCTaGAGAAGTGACACTGGCACTAGGCACACAGTAAACAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: AQSRPGQAFCKCFFC*RSDTGTRHTVNKLL
Trigger: CAGCAGCTTGTTTACTGTGTGCCTAGTGCCAGTGTCACTTCTCAAGCAAAAGAAGCATTTGCAAAATGCCTGTCCTGGCCTAGATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp TCCGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACAATGAAGGTTATCTGGATGCGATTC +
Preference number: 2 (lower is better)
Translates to: SGTIMLKVNFWHVAG*SLTSSTMKVIWMRF
Trigger: GAATCGCATCCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR CAA 90 bp TGTAAAAATCTGCTGCCGCTCCCCACTCCAGATGGCATGGTGAAGTaGAATCTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: CKNLLPLPTPDGMVK*NLLFGASLSSSKQN
Trigger: GTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATGCCATCTGGAGTGGGGAGCGGCAGCAGATTTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR GCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTAGGATAGAGAGCAATTaGAACTCTCAGTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVRIESN*NSQCLL
Trigger: CAGCAAACACTGAGAGTTGCAATTGCTCTCTATCCT...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR GCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTCACTCACTTTAACCTaGATAAATGAACAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: WGAEVSFPSSACEPPVLASLTLT*INEQFC
Trigger: GCAGAACTGTTCATTTATGCAGGTTAAAGTGAGTGA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp ATTCACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTTGTAGAGGAGGTGGCTaGGAAAACCTTCATCATCAG +
Preference number: 2 (lower is better)
Translates to: IHLHLGLSFGPLGLYQSSCRGGG*ENLHHQ
Trigger: CTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACA...ACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
3UTR CAA 90 bp TCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTaGCTGCTGGAATGTGAATCAGAGCCACCACTTTGGAACTCTTTG +
Preference number: 2 (lower is better)
Translates to: SQVLARIESNCNSQC*LLECESEPPLWNSL
Trigger: CAAAGAGTTCCAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp CCTCATTTTACTTGCATTGAAGCTGAGAGCTTCCAAGGAAAGCATTaGACTCCGGGCCCCACAGATTTGCAATGCCTTAAATGGGCAATC +
Preference number: 2 (lower is better)
Translates to: PHFTCIEAESFQGKH*TPGPTDLQCLKWAI
Trigger: GATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAAGCTCTCAGCTTCAATGCAAGTAAAATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp TTGAATCTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTaGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGC +
Preference number: 2 (lower is better)
Translates to: LNLLFGASLSSSKQN*FRSRSNVPLAVLSG
Trigger: GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR TCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCTTGACCCTGGATGTCTaGATCCCCTCAGCCCACATT +
Preference number: 2 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCLTLDV*IPSAHI
Trigger: AATGTGGGCTGAGGGGATTCAGACATCCAGGGTCAA...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR GCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGATTCAAGCGATTCTCTTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAAGAGAATCGCTTGAA...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCATAACTGAAGAAATCTaGGTGATGTTAAAACGAGGG +
Preference number: 2 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGITEEI*VMLKRG
Trigger: CCCTCGTTTTAACATCACCCAGATTTCTTCAGTTAT...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCGTGGGGCAGCTCCCTaGTGGCTGGACTCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFRGAAP*WLDSFH
Trigger: ATGGAAAGAGTCCAGCCACCAGGGAGCTGCCCCACG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR CAA 90 bp CTTGAGTCACTTGCTCAGGCCCGTTCCCACACTGTGGAGTGTACTTaGGTTTTCAATAAATCCCTGCTTTCATTCTTTCGTTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: LESLAQARSHTVECT*VFNKSLLSFFRCLI
Trigger: AATGAGGCAACGAAAGAATGAAAGCAGGGATTTATTGAAAACCAAAGTACACTCCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGGTCCCTCTTGGTGCCTaGCTTAAATCTCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: RCNFTLASDWLLFATNQMVPLGA*LKSLLW
Trigger: CCAGAGAAGAGATTTAAGTCAGGCACCAAGAGGGAC...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR GCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTATTCTTTCTCTGCTTTaGTGGGCATTTTGTTCCATT +
Preference number: 2 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVILSLL*WAFCSI
Trigger: AATGGAACAAAATGCCCAGCAAAGCAGAGAAAGAAT...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp TTTGCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTaGGACAACTTGCAGTCAAGACCCTCCACCGGTGACACTTTGACT +
Preference number: 2 (lower is better)
Translates to: FAGHFVPFFVQNSKN*DNLQSRPSTGDTLT
Trigger: AGTCAAAGTGTCACCGGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTTGACCCTGGATGTCTaGATCCCCTCAGCCCACATT +
Preference number: 2 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSLTLDV*IPSAHI
Trigger: AATGTGGGCTGAGGGGATTCAGACATCCAGGGTCAA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR-3UTR CCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGAGGCAGGAAAATAAGGTaGAAACCAGATGTAAGGATA +
Preference number: 2 (lower is better)
Translates to: LWPLSTIPSCPVITGEERGRKIR*KPDVRI
Trigger: TATCCTTACATCTGGTTTCCACCTTATTTTCCTGCC...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCAGCTCCCTGGTGGCTaGACTCTTTCCATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIQLPGG*TLSILA
Trigger: TGCCAAAATGGAAAGAGTCCAGCCACCAGGGAGCTG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR-3UTR CCA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTCTTCCAGGGAAATGGTaGGATTTTGTCTCAATTCAC +
Preference number: 2 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSLPGKW*DFVSIH
Trigger: GTGAATTGAGACAAAATCCCACCATTTCCCTGGAAG...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAGGCAGCATCTCAGTaGTTGACAGGCCCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISEAASQ*LTGPSL
Trigger: TAAGGAGGGGCCTGTCAATCACTGAGATGCTGCCTC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR-3UTR CCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGGGGCAGCTCCCTGGTaGCTGGACTCTTTCCATTTT +
Preference number: 2 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISGAAPW*LDSFHF
Trigger: AAAATGGAAAGAGTCCAGCCACCAGGGAGCTGCCCC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR CAA 90 bp CATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTaGCAGTCAAGACCCTCCACCGGTGACACTTTGACTTCTGGATTT +
Preference number: 2 (lower is better)
Translates to: HFVPFFVQNSKNLDN*QSRPSTGDTLTSGF
Trigger: AAATCCAGAAGTCAAAGTGTCACCGGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp TTGCCTCATTCTTTCTCTGCTTTGCTGGGCATTTTGTTCCATTCTTaGTTCAAAACTCCAAGAACTTGGACAACTTGCAGTCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: LPHSFSALLGILFHS*FKTPRTWTTCSQDP
Trigger: AGGGTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGCAAAGCAGAGAAAGAATGAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR GCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGTTATTCCCAGTTCATTaGTCATGCCTACAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: RCNFTLASDWLLFATNQMLFPVH*SCLQVE
Trigger: TTCCACCTGTAGGCATGAGCAATGAACTGGGAATAA...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGGCTCATGCCTACAGGTaGAAGTCTGAGTTTTATGTC +
Preference number: 2 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLAHAYR*KSEFYV
Trigger: GACATAAAACTCAGACTTCCACCTGTAGGCATGAGC...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCAAACATCCCATGTTTaGCCCTGGATGTCTGAATCC +
Preference number: 2 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHQTSHV*PWMSES
Trigger: GGATTCAGACATCCAGGGTCAAACATGGGATGTTTG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR-3UTR TCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAAAAGAAGGTGCCTACTaGGTTTTCTTCTTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: EEIWVMLKRGQENKVETRKEGAY*VFFFPD
Trigger: ATCTGGAAAGAAGAAAACTCAGTAGGCACCTTCTTT...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR-3UTR CCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGTTGCAATGCCTTAAATaGGCAATCAGCCACTTCACT +
Preference number: 2 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLLQCLK*AISHFT
Trigger: AGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAA...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGCAATCAGACCAATTGTaGTCCACTACTTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: RCNFTLASDWLLFATNQMQSDQL*STTSFP
Trigger: TGGAAATGAAGTAGTGGACCACAATTGGTCTGATTG...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp TTCATTCTTTCGTTGCCTCATTCTTTCTCTGCTTTGCTGGGCATTTaGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGC +
Preference number: 2 (lower is better)
Translates to: FILSLPHSFSALLGI*FHSLFKTPRTWTTC
Trigger: GCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGCAAAGCAGAGAAAGAATGAGGCAACGAAAGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCCTCCAGTTTTTGAGTTaGATTCATATGTTTCCCCGG +
Preference number: 2 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSLQFLS*IHMFPR
Trigger: CCGGGGAAACATATGAATTCAACTCAAAAACTGGAG...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGAAGAAGATTTGAGGTaGCTTACAAAGGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHEEDLR*LTKVYG
Trigger: GCCATACACCTTTGTAAGTCACCTCAAATCTTCTTC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR-3UTR TCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCGAAGAAGATTTGAGGTaGCTTACAAAGGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIEEDLR*LTKVYG
Trigger: GCCATACACCTTTGTAAGTCACCTCAAATCTTCTTC...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR CAA 90 bp AGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGTTCATaGCTCATGCCTACAGGTGGAAGTCTGAGTTTTATGTCTAGATGG +
Preference number: 2 (lower is better)
Translates to: SYISYSIIIPFIPSS*LMPTGGSLSFMSRW
Trigger: CCATCTAGACATAAAACTCAGACTTCCACCTGTAGGCATGAGCAATGAACTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 90 bp GTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTaGTTTAAAAATTTGTCAAACATCCCATGTTTGACCCTGGATGTC +
Preference number: 2 (lower is better)
Translates to: VSFQNTQLCDQTPFY*FKNLSNIPCLTLDV
Trigger: GACATCCAGGGTCAAACATGGGATGTTTGACAAATTTTTAAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
3UTR TCA 72 bp GGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTaGGTCACTTGCTCAGGCCCGTTCCCACACTGTGGA +
Preference number: 3 (lower is better)
Translates to: GVFGLRRLYLGP*VTCSGPFPHCG
Trigger: TCCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TGGGTGTGGTTTGGGGTAAGCCCTGTTCATGAAGGCTaGATTTCTGTTCTTTGGGTTGCCCAGCTTGCCACC +
Preference number: 3 (lower is better)
Translates to: WVWFGVSPVHEG*ISVLWVAQLAT
Trigger: GGTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCAGCCTTCATGAACAGGGCTTACCCCAAACCACACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR GCA 72 bp GTAGGCTCTCACCTGACTCCCCAGTTGGGAAGGGAGTaGTTCCCTAATGAACACTCACCTGGACCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: VGSHLTPQLGRE*FPNEHSPGPFL
Trigger: TAAGAAAGGTCCAGGTGAGTGTTCATTAGGGAAGCACTCCCTTCCCAACTGGGGAGTCAGGTGAGAGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 72 bp GCACTCTTGCCCCTATTTCTTGAGTTTCTCGAGGCTTaGCTTGCGACTAGGAAGACACTCAGCTCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: ALLPLFLEFLEA*LATRKTLSSSC
Trigger: GCAGGAAGAGCTGAGTGTCTTCCTAGTCGCAAGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp CATGAAGTGGCCAAGGGGAAACCTCCAAGGGGTATTTaGACTGAGAAGACTGTATCTGGGCCCTTGAGTCAC +
Preference number: 3 (lower is better)
Translates to: HEVAKGKPPRGI*TEKTVSGPLSH
Trigger: GTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGGAGGTTTCCCCTTGGCCACTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp GGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGGCTGGGAAAACCTTCTCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: GLYQSSGNAVEEVAGKTFSSAVI*ATMVPG
Trigger: TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGA...GAAGGTTTTCCCAGCCACCTCCTCTACAGCATTACCACTTGACTGGTACAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
3UTR GCA 72 bp AAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTaGTTGCTACACAGGCTGAGTTTCAGACCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: KCHFPVLLVSHP*LLHRLSFRPCF
Trigger: AAAGCAGGGTCTGAAACTCAGCCTGTGTAGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp GCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTaGAGAAGAAAGACCAGCTGCTCACCACTCTCTCCT +
Preference number: 3 (lower is better)
Translates to: AIKHNSLLPCHH*RRKTSCSPLSP
Trigger: AGGAGAGAGTGGTGAGCAGCTGGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp GGTCCACTACTTCATTTCCATGAGGTGAGCATGAAGTaGCCAAGGGGAAACCTCCAAGGGGTATTTGGACTG +
Preference number: 3 (lower is better)
Translates to: GPLLHFHEVSMK*PRGNLQGVFGL
Trigger: CAGTCCAAATACCCCTTGGAGGTTTCCCCTTGGCCACTTCATGCTCACCTCATGGAAATGAAGTAGTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp GCAAACAATGAGAACCCCAGATGTGAAAGGGGGCTCTaGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: ANNENPRCERGL*GAEVSFPSSAC
Trigger: ACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCAGAGCCCCCTTTCACATCTGGGGTTCTCATTGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTAAATGCTTCTTTTGCTaGAGAAGTGACACTGGCACT +
Preference number: 3 (lower is better)
Translates to: WGAEVSFPSSACEPPVLAKCFFC*RSDTGT
Trigger: AGTGCCAGTGTCACTTCTCAAGCAAAAGAAGCATTT...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAACTGTATCTGGGCCCTaGAGTCACTTGCTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRTVSGP*SHLLRP
Trigger: GGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGT...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTTAGCCTCTGATTGGTaGCTTTTTGCAACCAATCAG +
Preference number: 3 (lower is better)
Translates to: WGAEVSFPSSACEPPVLALASDW*LFATNQ
Trigger: CTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp AGAGGCCCCAGGCTTCAGGAAGTCCCTCTTGGTGCCTaGCTTAAATCTCTTCTCTGGCCATTAAGCACAATT +
Preference number: 3 (lower is better)
Translates to: RGPRLQEVPLGA*LKSLLWPLSTI
Trigger: AATTGTGCTTAATGGCCAGAGAAGAGATTTAAGTCAGGCACCAAGAGGGACTTCCTGAAGCCTGGGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp ATGCCTACAGGTGGAAGTCTGAGTTTTATGTCTAGATaGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCA +
Preference number: 3 (lower is better)
Translates to: MPTGGSLSFMSR*GFQYVPTQSPA
Trigger: TGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACATAAAACTCAGACTTCCACCTGTAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCTGCAACTCTCAGTGTTaGCTGCTGGAATGTGAATCA +
Preference number: 3 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLCNSQC*LLECES
Trigger: TGATTCACATTCCAGCAGCAAACACTGAGAGTTGCA...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTTTATTCCCAGTTCATaGCTCATGCCTACAGGTGGA +
Preference number: 3 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVFIPSS*LMPTGG
Trigger: TCCACCTGTAGGCATGAGCAATGAACTGGGAATAAA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTGCTTTGCTGGGCATTTaGTTCCATTCTTTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: WGAEVSFPSSACEPPVLAALLGI*FHSLFK
Trigger: TTTGAACAAAGAATGGAACAAAATGCCCAGCAAAGC...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTG +
Preference number: 3 (lower is better)
Translates to: KQNLFRSRSNVPLAVLSGYPLGH*DCTSQL
Trigger: CAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATA...GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR TCA 72 bp CAATCAGACCAATTGTGGTCCACTACTTCATTTCCATaGGGTGAGCATGAAGTGGCCAAGGGGAAACCTCCA +
Preference number: 3 (lower is better)
Translates to: QSDQLWSTTSFP*GEHEVAKGKPP
Trigger: TGGAGGTTTCCCCTTGGCCACTTCATGCTCACCTCATGGAAATGAAGTAGTGGACCACAATTGGTCTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp AACGCTGGGAAATTGGCTGTCTGTAACCAATCAGACTaGTTGCCAGCCGAGTCTTCGTTGCAACGTTGTAAC +
Preference number: 3 (lower is better)
Translates to: NAGKLAVCNQSD*LPAESSLQRCN
Trigger: GTTACAACGTTGCAACGAAGACTCGGCTGGCAATCAGTCTGATTGGTTACAGACAGCCAATTTCCCAGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR GCA 72 bp GGAAAGCATTTGACTCCGGGCCCCACAGATTTGCAATaGCTTAAATGGGCAATCAGCCACTTCACTCACTTT +
Preference number: 3 (lower is better)
Translates to: GKHLTPGPTDLQ*LKWAISHFTHF
Trigger: AAAGTGAGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TGGAATGTGAATCAGAGCCACCACTTTGGAACTCTTTaGCAGATCCAGCAATTGCTCCAGCAATCCCACTCT +
Preference number: 3 (lower is better)
Translates to: WNVNQSHHFGTL*QIQQLLQQSHS
Trigger: AGAGTGGGATTGCTGGAGCAATTGCTGGATCTGCCAAAGAGTTCCAAAGTGGTGGCTCTGATTCACATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTaGAACTCTTTGGCAGATCCAGCAATTGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: CLLLECESEPPL*NSLADPAIAPA
Trigger: TGCTGGAGCAATTGCTGGATCTGCCAAAGAGTTCCAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TTGACTCCGGGCCCCACAGATTTGCAATGCCTTAAATaGGCAATCAGCCACTTCACTCACTTTAACCTGCAT +
Preference number: 3 (lower is better)
Translates to: LTPGPTDLQCLK*AISHFTHFNLH
Trigger: ATGCAGGTTAAAGTGAGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp CCCTTGAGTCACTTGCTCAGGCCCGTTCCCACACTGTaGAGTGTACTTTGGTTTTCAATAAATCCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: PLSHLLRPVPTL*SVLWFSINPCF
Trigger: AAAGCAGGGATTTATTGAAAACCAAAGTACACTCCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTTCCTCAGCCCACGCTTaGCCACTCAGCTCATCTTCT +
Preference number: 3 (lower is better)
Translates to: EIWVMLKRGQENKVETRCSSAHA*PLSSSS
Trigger: AGAAGATGAGCTGAGTGGCAAAGCGTGGGCTGAGGA...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR-3UTR CAA 90 bp AGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCACCATTTGGGCCACTTGGATaGTACCAGTCAACTGATTTA +
Preference number: 3 (lower is better)
Translates to: RTCLGQEATSPWLFFPAPFGPLG*YQSTDL
Trigger: TAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAA...TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR-3UTR CAA 90 bp CTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTTGTTTAGGTCAAGATGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: LLFGASLSSSKQNLFRSRWHVAG*SLTSST
Trigger: TGTGGAAGACGTCAACGACAATCCTGCCACATGCCA...TCTTGACCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR TCA 72 bp GAGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTaGATCAGAGCCACCACTTTGGAACTCTTTGGCAGA +
Preference number: 3 (lower is better)
Translates to: EQLQLSVFAAGM*IRATTLELFGR
Trigger: TCTGCCAAAGAGTTCCAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp TTCCCAGTTCATTGCTCATGCCTACAGGTGGAAGTCTaGGTTTTATGTCTAGATGGGGCTTCCAGTATGTCC +
Preference number: 3 (lower is better)
Translates to: FPVHCSCLQVEV*VLCLDGASSMS
Trigger: GGACATACTGGAAGCCCCATCTAGACATAAAACTCAGACTTCCACCTGTAGGCATGAGCAATGAACTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp TCTTCCACAATGAAGGTTATCTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCCTTCACTAGAACTTCC +
Preference number: 3 (lower is better)
Translates to: SSTMKVIWMRFS*PPYGLSFTRTS
Trigger: GGAAGTTCTAGTGAAGGACAGACCATATGGGGGTCAGGAGAATCGCATCCAGATAACCTTCATTGTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR CCA 72 bp GAGCGTGACCTTTGTAACTCCACTTCAGTCTCTGATTaGTTGCTTCCTGCAACCAATCAGACCAATTGTGGT +
Preference number: 3 (lower is better)
Translates to: ERDLCNSTSVSD*LLPATNQTNCG
Trigger: ACCACAATTGGTCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGTCACGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp GTGGATCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTaGATTCATATGTTTCCCCGGTCACTGGATCTATGG +
Preference number: 3 (lower is better)
Translates to: VDLSTFWLQFLS*IHMFPRSLDLW
Trigger: CCATAGATCCAGTGACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR GCA 72 bp ATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTaGAAATGCTTCTTTTGCTTGAGAAGTGACACTGGC +
Preference number: 3 (lower is better)
Translates to: INHAQSRPGQAF*KCFFCLRSDTG
Trigger: GCCAGTGTCACTTCTCAAGCAAAAGAAGCATTTGCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TTGCTCAGGCCCGTTCCCACACTGTGGAGTGTACTTTaGTTTTCAATAAATCCCTGCTTTCATTCTTTCGTT +
Preference number: 3 (lower is better)
Translates to: LLRPVPTLWSVL*FSINPCFHSFV
Trigger: AACGAAAGAATGAAAGCAGGGATTTATTGAAAACCAAAGTACACTCCACAGTGTGGGAACGGGCCTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp CACTCCAGATGGCATGGTGAAGTTGAATCTGTTGTTTaGTGCCTCACTGTCATCATCAAAGCAGAACTTGTT +
Preference number: 3 (lower is better)
Translates to: HSRWHGEVESVV*CLTVIIKAELV
Trigger: AACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATGCCATCTGGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR CCA 72 bp ATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTaGACAACTTGCAGTCAAGACCCTCCACCGGTGACA +
Preference number: 3 (lower is better)
Translates to: ILFHSLFKTPRT*TTCSQDPPPVT
Trigger: TGTCACCGGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CCA 72 bp TCGTTGCAACGTTGTAACTTCACCTTAGCCTCTGATTaGTTGCTTTTTGCAACCAATCAGATGTTTGCACAG +
Preference number: 3 (lower is better)
Translates to: SLQRCNFTLASD*LLFATNQMFAQ
Trigger: CTGTGCAAACATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACGTTGCAACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCGCTCCAGTTTTTGAGTaGAATTCATATGTTTCCCCG +
Preference number: 3 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIAPVFE*NSYVSP
Trigger: CGGGGAAACATATGAATTCAACTCAAAAACTGGAGC...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTGGACTCTTTCCATTTaGGCATTTGGGTTAGTGGAT +
Preference number: 3 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIWTLSI*AFGLVD
Trigger: ATCCACTAACCCAAATGCCAAAATGGAAAGAGTCCA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
3UTR CCA 72 bp CTTTTGCAAAGTTTAAATCCATTCAAGGGAGTTCCCTaGCAACCAACCCTTATTAATAAATCACGCTCAATC +
Preference number: 3 (lower is better)
Translates to: LLQSLNPFKGVP*QPTLINKSRSI
Trigger: GATTGAGCGTGATTTATTAATAAGGGTTGGTTGCCAGGGAACTCCCTTGAATGGATTTAAACTTTGCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR TCA 72 bp TGTAAGGCTGATGGTGTTTCAGCTTTGAGGAAAAAGTaGTTTCACTTCAATAGTAATTTTAACCAGAATGGC +
Preference number: 3 (lower is better)
Translates to: CKADGVSALRKK*FHFNSNFNQNG
Trigger: GCCATTCTGGTTAAAATTACTATTGAAGTGAAATCACTTTTTCCTCAAAGCTGAAACACCATCAGCCTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATCGTGGGGCAGCTCCCTaGTGGCTGGACTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHRGAAP*WLDSFH
Trigger: ATGGAAAGAGTCCAGCCACCAGGGAGCTGCCCCACG...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTCAGGACCTGATAGGTaGCCCTGGGCCTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVSGPDR*PWAWGS
Trigger: CGACCCCCAGGCCCAGGGTCACCTATCAGGTCCTGA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCATCCGTGGGGCAGCTCCCTaGTGGCTGGACTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ISGTQTSILSPRFATQLIRGAAP*WLDSFH
Trigger: ATGGAAAGAGTCCAGCCACCAGGGAGCTGCCCCACG...GATGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR TCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCGCTCTGTGGAGGCTTTaGGGCCTCCACTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGALWRL*GLHCPS
Trigger: TGAGGGACAGTGGAGGCCTCAAAGCCTCCACAGAGC...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATGAAGCAACGTCCCCTTaGCTGTTCTTTCCGGCACCA +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHEATSP*LFFPAP
Trigger: TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTC...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATGGGGCAGCTCCCTGGTaGCTGGACTCTTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHGAAPW*LDSFHF
Trigger: AAAATGGAAAGAGTCCAGCCACCAGGGAGCTGCCCC...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp ACGGGGCAGCAGGTGTTCTCTCCTCCTGGCGCACTCTaGCCCCTATTTCTTGAGTTTCTCGAGGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TGQQVFSPPGAL*PLFLEFLEACL
Trigger: AAGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAGAGTGCGCCAGGAGGAGAGAACACCTGCTGCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATCCCTCACCTCCACGATaGGATGGAAACTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHPSPPR*DGNFCV
Trigger: GACACAGAAGTTTCCATCTCATCGTGGAGGTGAGGG...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCAGAAGCAACGTCCCCTTaGCTGTTCTTTCCGGCACCA +
Preference number: 4 (lower is better)
Translates to: SFLEPRPASSAHALPLSSEATSP*LFFPAP
Trigger: TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTC...TGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp AGCTTGCCACCCTCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGGTCTGTGGATGGCTTTaGCCAATAGGACGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SLPPSFLEPRPASSAHALVCGWL*PIGRPG
Trigger: ACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGAC...CAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTCAGGGGCAGTGTCTGTaGATGGCTTTGGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLAQGQCL*MALANR
Trigger: CCTATTGGCCAAAGCCATCCACAGACACTGCCCCTG...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp AGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTaGAGTCACTTGCTCAGGCCCGTTCCCACACTGTGG +
Preference number: 4 (lower is better)
Translates to: RGIWTEKTVSGP*SHLLRPVPTLW
Trigger: CCACAGTGTGGGAACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATGGAGAGCCAGGAGAATaGTTGCTTCCTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHGEPGE*LLPAYL
Trigger: CAAGTATGCAGGAAGCAATCATTCTCCTGGCTCTCC...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: EVAGKTFIIRILRCDIGHWMRFS*PPYGLS
Trigger: GGACAGACCATATGGGGGTCAGGAGAATCGCATCCA...GTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTCCAAGGAAAGCATTTaGCTCCGGGCCCCACAGATT +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLASKESI*LRAPQI
Trigger: AATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATTTCTGTTCTTTGGGTTaGCCAGCTTGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHFCSLG*PACHPH
Trigger: ATGAGGGTGGCAAGCTGGGCAACCCAAAGAACAGAA...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTAGCTGGGATTACAGGTaGCTGCTAACACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLASWDYR*LLTRPA
Trigger: AGCTGGACGTGTTAGCAGGCACCTGTAATCCCAGCT...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCTGTAGAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATGAAGCAACGTCCCCTTaGCTGTTCTTTCCGGCACCA +
Preference number: 4 (lower is better)
Translates to: AVEEVAGKTFIIRILRCDEATSP*LFFPAP
Trigger: TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTC...ATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp GCTGTAGAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATGGACTTGCAGGTCTGTaGCACCAACCTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: AVEEVAGKTFIIRILRCDGLAGL*HQPHPS
Trigger: TGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCC...ATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR TCA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGGTTCCATCCCAGTGGTaGCAACCTGCGTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RWLGKPSSSGSSAVILATVPSQW*QPAFQN
Trigger: GTTCTGAAACGCAGGTTGTCACCACTGGGATGGAAC...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR GCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCGATCCTGTAAAAATCTaGTGCCGCTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGDPVKI*CRSPLQ
Trigger: CTGGAGTGGGGAGCGGCAGCAGATTTTTACAGGATC...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGGGGCTTCTGCCAAGTTaGCTTGAAACTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RWLGKPSSSGSSAVILATGLLPS*LETEVA
Trigger: AGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGCCC...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR GCA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGCTCGTGTCGGGCTTCTaGCAAGTTGCCTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: RWLGKPSSSGSSAVILATLVSGF*QVALKL
Trigger: CAGTTTCAAGGCAACTTGGCAGAAGCCCGACACGAG...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTAATACATTTGGATACTaGAGGCTGGCCCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLANTFGY*RLAPPV
Trigger: CACTGGAGGGGCCAGCCTCCAGTATCCAAATGTATT...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTTGTTTCCCCGGTCACTaGATCTATGGCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLACFPGH*IYGFSI
Trigger: GATGGAGAAGCCATAGATCCAGTGACCGGGGAAACA...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGCAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTC +
Preference number: 4 (lower is better)
Translates to: SFGPLGLYQSSGNAVEEVQDPPL*YWPRWF
Trigger: GAACCATCGTGGCCAATATCACAGCGGAGGATCCTG...CACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR TCA 90 bp TGTCTAGATGGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCATGGTGGCCTGGATTCTaGGAATATAGATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CLDGASSMSPLRVLQFLPWWPGF*EYRWGL
Trigger: CAACCCCCATCTATATTCTCAGAATCCAGGCCACCA...TGGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp ATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCATCCAAACATCCCATGTTTaGCCCTGGATGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: ISGTQTSILSPRFATQLIQTSHV*PWMSES
Trigger: GGATTCAGACATCCAGGGTCAAACATGGGATGTTTG...GATGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR GCA 90 bp TCACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTGGACAGTCAGGACTTaGAGGTCTGTGACACCAACC +
Preference number: 4 (lower is better)
Translates to: SPASRSILWATWIVPVKWWTVRT*RSVTPT
Trigger: GGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCA...CCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR TCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGCTGCTGCTCTCTCTaGAGCTCTACATTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLSCCSL*SSTFAG
Trigger: TCCAGCAAATGTAGAGCTTCAGAGAGAGCAGCAGCT...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCCCACCGGTGACACTTTaGCTTCTGGATTTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTPPVTL*LLDFPE
Trigger: TTCGGGGAAATCCAGAAGTCAAAGTGTCACCGGTGG...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCTGGACAGTCAGGACTTaGAGGTCTGTGACACCAACC +
Preference number: 4 (lower is better)
Translates to: KQNLFRSRSNVPLAVLSGWTVRT*RSVTPT
Trigger: GGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCA...GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp AGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCACCACCTGTAAAAATCTGCTaGCGCTCCCCACTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RTCLGQEATSPWLFFPAPPVKIC*RSPLQM
Trigger: CATCTGGAGTGGGGAGCGGCAGCAGATTTTTACAGG...TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCTTGGGTTGCCCAGCTTaGCACCCTCATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTLGCPA*HPHFWN
Trigger: GTTCCAGAAATGAGGGTGGCAAGCTGGGCAACCCAA...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATAGGATAGAGAGCAATTaGAACTCTCAGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHRIESN*NSQCLL
Trigger: CAGCAAACACTGAGAGTTGCAATTGCTCTCTATCCT...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGAGCAATCTCAGCCCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGGGCTGAGATTGC...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCGGGCTTCTGCCAAGTTaGCTTGAAACTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KQNLFRSRSNVPLAVLSGGLLPS*LETEVA
Trigger: AGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGCCC...GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp GAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCTTCACATCTGTTACCTaGACAGTCAGGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EEVAGKTFIIRILRCDIGFTSVT*TVRTCR
Trigger: CCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAA...GCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTGGCTGGCCCCTCCAGTaGAGATGGAGTACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFGWPLQ*RWSTGG
Trigger: GCCTCCTGTACTCCATCTCCACTGGAGGGGCCAGCC...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCGGAAAGATCTGGGGCTaGAATCAAGGTCGGTACATG +
Preference number: 4 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLGKIWG*NQGRYM
Trigger: CATGTACCGACCTTGATTCCAGCCCCAGATCTTTCC...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp AGCTTGCCACCCTCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGAAGATAGTGTTCATCTaGATAGTTTCCACCACGACG +
Preference number: 4 (lower is better)
Translates to: SLPPSFLEPRPASSAHALKIVFI*IVSTTT
Trigger: CGTCGTGGTGGAAACTATCCAGATGAACACTATCTT...CAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTGGATTTCTGTTCTTTaGGTTGCCCAGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVWISVL*VAQLAT
Trigger: GGTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCTGTAGAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: AVEEVAGKTFIIRILRCDTTSTH*FQLLEQ
Trigger: TTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGT...ATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
3UTR CAA 72 bp CACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATaGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLHLGLSFGPLG*YQSSGNAVEEV
Trigger: CACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR TCA 90 bp GCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTCTCAAAGTAGGTGCCTaGCAGCCAATTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: AGKTFIIRILRCDIGHDGLKVGA*QPIHPK
Trigger: TTTAGGGTGAATTGGCTGTCAGGCACCTACTTTGAG...ACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp ATTCACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGACTTGCAGGTCTGTaGCACCAACCTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: IHLHLGLSFGPLGLYQSSGLAGL*HQPHPS
Trigger: TGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCC...ACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR TCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATCGGTACATGTCAGCTTaGAATTCTGAATATTTGTGC +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHRYMSA*NSEYLC
Trigger: GCACAAATATTCAGAATTTCAAGCTGACATGTACCG...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TCTGGATGCGATTCTCCTGACCCCCATATGGTCTGTCCTTCACTAGAACTTCCAAGGTGGAGAATTCTCTaGCACATTGCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGCDSPDPHMVCPSLELPRWRIL*HIACSR
Trigger: CCTGCTACAGGCAATGTGGCAGAGAATTCTCCACCT...TGGAAGTTCTAGTGAAGGACAGACCATATGGGGGTCAGGAGAATCGCATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp TGTCTAGATGGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCATTCACAGAAAACTTGTaGACTGAAGTCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CLDGASSMSPLRVLQFLPFTENL*TEVPGG
Trigger: TCCACCTGGGACTTCAGTGCACAAGTTTTCTGTGAA...TGGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TCTTTCCGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGATCCTGTAAAAATCTaGTGCCGCTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SFRHHNAEGELLACGRIVDPVKI*CRSPLQ
Trigger: CTGGAGTGGGGAGCGGCAGCAGATTTTTACAGGATC...GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATCAAATCCACGACGGTTaGTGTCTTCATTTTATTCAG +
Preference number: 4 (lower is better)
Translates to: AAGHRARVKLAQALLGTHQIHDG*CLHFIQ
Trigger: CTGAATAAAATGAAGACAGCAACCGTCGTGGATTTG...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCTTCACATCTGTTACCTaGACAGTCAGGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLFTSVT*TVRTCR
Trigger: CCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAA...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTGCCTTGAAACTGAGGTaGCTCGTTCACATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: HLHLGLSFGPLGLYQSSGALKLR*LVHICY
Trigger: GTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGC...ACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CCA 90 bp TCACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTGTAGAGGAGGTGGCTaGGAAAACCTTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: SPASRSILWATWIVPVKWCRGGG*ENLHHQ
Trigger: CTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACA...CCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CCA 90 bp AGCTTGCCACCCTCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGGGCAGGAAAATAAGGTaGAAACCAGATGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: SLPPSFLEPRPASSAHALGRKIR*KPDVRI
Trigger: TATCCTTACATCTGGTTTCCACCTTATTTTCCTGCC...CAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCGCTCATGCCTACAGGTaGAAGTCTGAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGAHAYR*KSEFYV
Trigger: GACATAAAACTCAGACTTCCACCTGTAGGCATGAGC...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTCCCGTTCCCACACTGTaGAGTGTACTTTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVPVPTL*SVLWFS
Trigger: TGAAAACCAAAGTACACTCCACAGTGTGGGAACGGG...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTTCAGTGAGGGGATTTaGGTTGACTATCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVFSEGI*VDYLGK
Trigger: TTTCCCCAGATAGTCAACTCAAATCCCCTCACTGAA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTGTTCCATCCCAGTGGTaGCAACCTCAAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSVPSQW*QPQSRC
Trigger: GCACCTACTTTGAGGTTGTCACCACTGGGATGGAAC...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTGGACTTGCAGGTCTGTaGCACCAACCTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLGLAGL*HQPHPS
Trigger: TGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCC...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp CATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAACTGATTTATCACAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTC +
Preference number: 4 (lower is better)
Translates to: HLGLSFGPLGLYQSTDLSQDPPL*YWPRWF
Trigger: GAACCATCGTGGCCAATATCACAGCGGAGGATCCTG...TGATAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp AGCTTGCCACCCTCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGTCTGGCTCCAGTTTTTaGGTTGAATTCATATGTTTC +
Preference number: 4 (lower is better)
Translates to: SLPPSFLEPRPASSAHALSGSSF*VEFICF
Trigger: GAAACATATGAATTCAACTCAAAAACTGGAGCCAGA...CAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR TCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACTCCACTTCAGTCTCTaGTTGGTTGCTTCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERLHFSL*LVASCN
Trigger: GTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAG...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTGGACAGTCAGGACTTaGAGGTCTGTGACACCAACC +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLWTVRT*RSVTPT
Trigger: GGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGAAGAACTTGGACAACTTaGAGTCAAGACCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERRTWTT*SQDPPP
Trigger: CGGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCT...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTGGACCAGTGGTGACAACCTaGGTTTCAGAACGACATCTA +
Preference number: 4 (lower is better)
Translates to: KPSSSGSSAVILATMVPGPVVTT*VSERHL
Trigger: TAGATGTCGTTCTGAAACGCAGGTTGTCACCACTGG...TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR GCA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTCTCGTGTCGGGCTTCTaGCAAGTTGCCTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSLVSGF*QVALKL
Trigger: CAGTTTCAAGGCAACTTGGCAGAAGCCCGACACGAG...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGCTTCCAGGGAAATGGTaGGATTTTGTCTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: RWLGKPSSSGSSAVILATLPGKW*DFVSIH
Trigger: GTGAATTGAGACAAAATCCCACCATTTCCCTGGAAG...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CCA 90 bp GAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCTTCCAGGGAAATGGTaGGATTTTGTCTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: EEVAGKTFIIRILRCDIGLPGKW*DFVSIH
Trigger: GTGAATTGAGACAAAATCCCACCATTTCCCTGGAAG...GCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CCA 90 bp CGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACCTGAAGGTGAACTTTTaGCATGTGGCAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: RHHNAEGELLACGRIVVDLKVNF*HVAGLS
Trigger: CGACAATCCTGCCACATGCCAAAAGTTCACCTTCAG...GTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTAGTTTTATGTCTAGATaGGGCTTCCAGTATGTCCCC +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVSFMSR*GFQYVP
Trigger: GGGGACATACTGGAAGCCCCATCTAGACATAAAACT...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TGGGGAGCAGAAGTGTCATTTCCCAGTTCTGCTTGTGAGCCACCCGTGCTTGCTCTGTGGAGTGTACTTTaGTTTTCAATAAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: WGAEVSFPSSACEPPVLALWSVL*FSINPC
Trigger: GCAGGGATTTATTGAAAACCAAAGTACACTCCACAG...AGCAAGCACGGGTGGCTCACAAGCAGAACTGGGAAATGACACTTCTGCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTGAGGTGAGCATGAAGTaGCCAAGGGGAAACCTCCAA +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLEVSMK*PRGNLQ
Trigger: TTGGAGGTTTCCCCTTGGCCACTTCATGCTCACCTC...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp TTCCAAGGAAAGCATTTGACTCCGGGCCCCACAGATTaGCAATGCCTTAAATGGGCAATCAGCCACTTCACT +
Preference number: 4 (lower is better)
Translates to: FQGKHLTPGPTD*QCLKWAISHFT
Trigger: AGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTaGGCTGTTCTTTCCGGCACCATAATGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KQNLFRSRSNVP*AVLSGTIMLKV
Trigger: CACCTTCAGCATTATGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
3UTR CAA 72 bp CTCCCCACTCCAGATGGCATGGTGAAGTTGAATCTGTaGTTTGGTGCCTCACTGTCATCATCAAAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LPTPDGMVKLNL*FGASLSSSKQN
Trigger: GTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATGCCATCTGGAGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp AGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCACCATTCAGTGAGGGGATTTaGGTTGACTATCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RTCLGQEATSPWLFFPAPFSEGI*VDYLGK
Trigger: TTTCCCCAGATAGTCAACTCAAATCCCCTCACTGAA...TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVWMRFS*PPYGLS
Trigger: GGACAGACCATATGGGGGTCAGGAGAATCGCATCCA...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR TCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAGAGGCAGCATCTCAGTaGTTGACAGGCCCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETREAASQ*LTGPSL
Trigger: TAAGGAGGGGCCTGTCAATCACTGAGATGCTGCCTC...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGATTTGCTGCTGGAATGTaGATCAGAGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERFAAGM*IRATTL
Trigger: CAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAA...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGGGCATAGAGCTCGAGTaGAGCTTGCTCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLGIELE*SLLRLC
Trigger: GCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCC...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTGTCCCTCTTGGTGCCTaGCTTAAATCTCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLVPLGA*LKSLLW
Trigger: CCAGAGAAGAGATTTAAGTCAGGCACCAAGAGGGAC...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTCTCCTGGCGCACTCTTaGCCCTATTTCTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLLLAHS*PYFLSF
Trigger: GAAACTCAAGAAATAGGGGCAAGAGTGCGCCAGGAG...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTCTGAGTTTCAGACCCTaGTTTCTAATGAGCACAACA +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVLSFRP*FLMSTT
Trigger: TGTTGTGCTCATTAGAAAGCAGGGTCTGAAACTCAG...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTATTCACATCTGTTACCTaGACAGTCAGGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGLSFGPLGLYQSSGNAVFTSVT*TVRTCR
Trigger: CCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAA...TACAGCATTACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGAAATAACGGAAAGATCTaGGGCTGGAATCAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERNNGKI*GWNQGR
Trigger: CCGACCTTGATTCCAGCCCCAGATCTTTCCGTTATT...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGACAGGGGCAGTGTCTGTaGATGGCTTTGGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRQGQCL*MALANR
Trigger: CCTATTGGCCAAAGCCATCCACAGACACTGCCCCTG...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTAAGATAGTGTTCATCTaGATAGTTTCCACCACGACG +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVKIVFI*IVSTTT
Trigger: CGTCGTGGTGGAAACTATCCAGATGAACACTATCTT...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTAACTGCAGAATCTCCATaGTCCAAAGTCCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGLSFGPLGLYQSSGNAVTAESP*SKVLQE
Trigger: TTCCTGGAGGACTTTGGACCATGGAGATTCTGCAGT...TACAGCATTACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CCA 90 bp CTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTAATCCTTTGGGCCACTTaGATTGTACCAGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGLSFGPLGLYQSSGNAVILWAT*IVPVKW
Trigger: CCACTTGACTGGTACAATCCAAGTGGCCCAAAGGAT...TACAGCATTACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR TCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTACCTGTTTAAGGCCTTaGGAGGGAGATGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLTCLRP*EGDGRK
Trigger: TTTTCTCCCATCTCCCTCTCAAGGCCTTAAACAGGT...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCACGTGGTCTAATTCCTaGACGTATTTACCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTTWSNS*TYLPQF
Trigger: AAACTGGGGTAAATACGTTCAGGAATTAGACCACGT...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTGAAACTTCTGTGTCCTaGTTCAAAGTCCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVETSVS*FKVQFC
Trigger: ACAGAATTGGACTTTGAAGCAGGACACAGAAGTTTC...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGGCTGGGAAATTGTCTCAATTCACCTaGATCTCGGTCTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLGLYQSSGNAVEEVAGKLSQFT*ISVYPL
Trigger: CAAAGGATAGACCGAGATGCAGGTGAATTGAGACAA...TTTCCCAGCCACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR GCA 90 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCTTGTCTCAATTCACCTaGATCTCGGTCTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: KQNLFRSRSNVPLAVLSGLSQFT*ISVYPL
Trigger: CAAAGGATAGACCGAGATGCAGGTGAATTGAGACAA...GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTCCTGTAAAAATCTGCTaGCGCTCCCCACTCCAGATG +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCPVKIC*RSPLQM
Trigger: CATCTGGAGTGGGGAGCGGCAGCAGATTTTTACAGG...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTGATCCTGTAAAAATCTaGTGCCGCTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCDPVKI*CRSPLQ
Trigger: CTGGAGTGGGGAGCGGCAGCAGATTTTTACAGGATC...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCTGTTCTTCCCAGTCTTaGAGGGGCAGTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCCSSQS*RGSVCG
Trigger: TCCACAGACACTGCCCCTGCAAGACTGGGAAGAACA...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTTGTTCTTCCCAGTCTTaGAGGGGCAGTGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCCSSQS*RGSVCG
Trigger: TCCACAGACACTGCCCCTGCAAGACTGGGAAGAACA...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATTGGGTTGCCCAGCTTaGCACCCTCATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRLGCPA*HPHFWN
Trigger: GTTCCAGAAATGAGGGTGGCAAGCTGGGCAACCCAA...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCGAACCTCATTTTACTTaGATTGAAGCTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLEPHFT*IEAESF
Trigger: GAAGCTCTCAGCTTCAATGCAAGTAAAATGAGGTTC...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp AGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCACCATTTGAGTTGACTATCTaGGGAAATCCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: RTCLGQEATSPWLFFPAPFELTI*GNPGIT
Trigger: TGTGATCCCAGGATTTCCCCAGATAGTCAACTCAAA...TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp CTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAACTGATTTAGCCTTGAAACTGAGGTaGCTCGTTCACATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LHLGLSFGPLGLYQSTDLALKLR*LVHICY
Trigger: GTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGC...TAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp CCAAGGGGTATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCCATTCTGAAGCTCTTTaGGGGAGAAATCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: PRGIWTEKTVSGPLSHLLHSEAL*GRNQEI
Trigger: TATTTCCTGATTTCTCCCCCAAAGAGCTTCAGAATG...GAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTTGTAGAGGAGGTGGCTaGGAAAACCTTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSCRGGG*ENLHHQ
Trigger: CTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACA...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGTACAGGAGGCTGCTCTaGGGGAGGTCTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: RCNFTLASDWLLFATNQMYRRLL*GRSLSV
Trigger: CACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTA...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTCAGCTCCCTGGTGGCTaGACTCTTTCCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFQLPGG*TLSILA
Trigger: TGCCAAAATGGAAAGAGTCCAGCCACCAGGGAGCTG...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp TTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTaGCTGCTGGAATGTGAATCAGAGCCACCACTTTGG +
Preference number: 4 (lower is better)
Translates to: LARIESNCNSQC*LLECESEPPLW
Trigger: CCAAAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp ACTTGCATTGAAGCTGAGAGCTTCCAAGGAAAGCATTaGACTCCGGGCCCCACAGATTTGCAATGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TCIEAESFQGKH*TPGPTDLQCLK
Trigger: TTTAAGGCATTGCAAATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAAGCTCTCAGCTTCAATGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp CGTGACCTTTGTAACTCCACTTCAGTCTCTGATTGGTaGCTTCCTGCAACCAATCAGACCAATTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RDLCNSTSVSDW*LPATNQTNCGP
Trigger: TGGACCACAATTGGTCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp CTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTaGACGTCTTCCACAATGAAGGTTATCTGGATGCGA +
Preference number: 4 (lower is better)
Translates to: LKVNFWHVAGLS*TSSTMKVIWMR
Trigger: TCGCATCCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTC +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIQDPPL*YWPRWF
Trigger: GAACCATCGTGGCCAATATCACAGCGGAGGATCCTG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGGAGGCAGCATCTCAGTaGTTGACAGGCCCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQEAASQ*LTGPSL
Trigger: TAAGGAGGGGCCTGTCAATCACTGAGATGCTGCCTC...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTCCCAGTTCTGCTTGTaGGCCACCCGTGCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHSQFCL*ATRACY
Trigger: GTAGCAAGCACGGGTGGCTCACAAGCAGAACTGGGA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCATCAGGACCTGATAGGTaGCCCTGGGCGGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISSGPDR*PWAGLL
Trigger: AAGAAGGCCCGCCCAGGGTCACCTATCAGGTCCTGA...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR GCA 90 bp GTAGAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTAGAATGATTGCTTCCTaGATACTTGATGGTCACAAC +
Preference number: 4 (lower is better)
Translates to: VEEVAGKTFIIRILRCDIRMIAS*ILDGHN
Trigger: GTTGTGACCATCAAGTATGCAGGAAGCAATCATTCT...AATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGCCTCAGCCCACGCTTTaGCACTCAGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLPQPTL*HSAHLL
Trigger: AAGAAGATGAGCTGAGTGGCAAAGCGTGGGCTGAGG...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCTTCTGTTCTTTGGGTTaGCCAGCTTGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVFCSLG*PACHPH
Trigger: ATGAGGGTGGCAAGCTGGGCAACCCAAAGAACAGAA...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTACCAATCAGACTGATTaGCAGCCGAGTCTTCGTTGC +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCTNQTD*QPSLRC
Trigger: GCAACGAAGACTCGGCTGGCAATCAGTCTGATTGGT...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGGGAGGTCTTTATCAGTaGCTCGCACCTGTCCCACTC +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQGGLYQ*LAPVPL
Trigger: GAGTGGGACAGGTGCGAGCCACTGATAAAGACCTCC...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTTGGATACTGGAGGCTaGCCCCTCCAGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFLDTGG*PLQWRW
Trigger: CCATCTCCACTGGAGGGGCCAGCCTCCAGTATCCAA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGGTGATCTGCCCACCTTaGCAAAGTGCTGGCATTACA +
Preference number: 4 (lower is better)
Translates to: RCNFTLASDWLLFATNQMVICPP*QSAGIT
Trigger: TGTAATGCCAGCACTTTGCCAAGGTGGGCAGATCAC...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGACTCAGTGTTTGCTGCTaGAATGTGAATCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRLSVCC*NVNQSH
Trigger: GTGGCTCTGATTCACATTCCAGCAGCAAACACTGAG...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp TTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTaGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LFGASLSSSKQN*FRSRSNVPLAV
Trigger: AACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp ATCTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTTGTTTAGGTCAAGGAGAGCCAGGAGAATaGTTGCTTCCTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: ICCLVPHCHHQSRTCLGQGEPGE*LLPAYL
Trigger: CAAGTATGCAGGAAGCAATCATTCTCCTGGCTCTCC...TTGACCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTC +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFQDPPL*YWPRWF
Trigger: GAACCATCGTGGCCAATATCACAGCGGAGGATCCTG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAGGTAAGCCCTGTTCATaGAGGCTGGATTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRGKPCS*RLDFCS
Trigger: AGAACAGAAATCCAGCCTTCATGAACAGGGCTTACC...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCCTGTAAAAATCTGCTaGCGCTCCCCACTCCAGATG +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIPVKIC*RSPLQM
Trigger: CATCTGGAGTGGGGAGCGGCAGCAGATTTTTACAGG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTCACGACGTCTCTCTCTaGAGTCTTCGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCHDVSL*SLRFSF
Trigger: AAAGGAGAAACGAAGACTGCAGAGAGAGACGTCGTG...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTCAGTTGGGAAGGGAGTaGTTCCCTAATGAACACTCA +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFQLGRE*FPNEHS
Trigger: TGAGTGTTCATTAGGGAAGCACTCCCTTCCCAACTG...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTGCAAATGCTTCTTTTaGTTGAGAAGTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLCKCFF*LRSDTG
Trigger: GCCAGTGTCACTTCTCAAGCAAAAGAAGCATTTGCA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTCCAGGACAGGCATTTTaGAAATGCTTCTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLPGQAF*KCFFCL
Trigger: CAAGCAAAAGAAGCATTTGCAAAATGCCTGTCCTGG...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCCTTGTGAGCCACCCGTaGTTGCTACACAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCILVSHP*LLHRLS
Trigger: ACTCAGCCTGTGTAGCAAGCACGGGTGGCTCACAAG...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGGCCTTGAAACTGAGGTaGCTCGTTCACATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: RCNFTLASDWLLFATNQMALKLR*LVHICY
Trigger: GTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGC...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCCTGAAGGTGAACTTTTaGCATGTGGCAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVLKVNF*HVAGLS
Trigger: CGACAATCCTGCCACATGCCAAAAGTTCACCTTCAG...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAAATCCAAAATACATTTaGATACTGGAGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRNPKYI*ILEAGP
Trigger: GGGGCCAGCCTCCAGTATCCAAATGTATTTTGGATT...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCGTCTGTGGATGGCTTTaGCCAATAGGACGACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSVCGWL*PIGRPG
Trigger: ACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGAC...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCCCCGTTTACTTTCCTaGGTGTGGTTTGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIPRLLS*VWFGVS
Trigger: GCTTACCCCAAACCACACCCAGGAAAGTAAACGGGG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCGGTGTTCTCTCCTCCTaGCGCACTCTTGCCCCTATT +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIGVLSS*RTLAPI
Trigger: AATAGGGGCAAGAGTGCGCCAGGAGGAGAGAACACC...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp CATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTaGGACAACTTGCAGTCAAGACCCTCCACCGGTGAC +
Preference number: 4 (lower is better)
Translates to: HFVPFFVQNSKN*DNLQSRPSTGD
Trigger: GTCACCGGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp ATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACAATGAAGGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: IMLKVNFWHVAG*SLTSSTMKVIW
Trigger: CCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGCTTCCTGCATACTTaGTGGTCACAACTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSCFLHT*WSQLCV
Trigger: CACGCACAGTTGTGACCATCAAGTATGCAGGAAGCA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGCTCAAAGTAGGTGCCTaGCAGCCAATTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLLKVGA*QPIHPK
Trigger: TTTAGGGTGAATTGGCTGTCAGGCACCTACTTTGAG...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCGTTCCATCCCAGTGGTaGCAACCTCAAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIVPSQW*QPQSRC
Trigger: GCACCTACTTTGAGGTTGTCACCACTGGGATGGAAC...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGAGGGACTTCGTCGTTaGGGTTCACGATGTTCACCT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHEGLRR*GSRCSP
Trigger: AGGTGAACATCGTGAACCTCAACGACGAAGTCCCTC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGTGGATGCGATTCTCCTaGCCCCCATATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQWMRFS*PPYGLS
Trigger: GGACAGACCATATGGGGGTCAGGAGAATCGCATCCA...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGACTCCAGTTTTTGAGTTaGATTCATATGTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRLQFLS*IHMFPR
Trigger: CCGGGGAAACATATGAATTCAACTCAAAAACTGGAG...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTTGACCCTGGATGTCTaGATCCCCTCAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHLTLDV*IPSAHI
Trigger: AATGTGGGCTGAGGGGATTCAGACATCCAGGGTCAA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCCTTGCCCCTATTTCTTaGGTTTCTCGAGGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSLAPIS*VSRGLP
Trigger: AGGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAG...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCAAGGGGTATTTGGACTaGGAAGACTGTATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSKGYLD*EDCIWA
Trigger: GGCCCAGATACAGTCTTCTCAGTCCAAATACCCCTT...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTGCTTGCTACACAGGCTaGGTTTCAGACCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFACYTG*VSDPAF
Trigger: GAAAGCAGGGTCTGAAACTCAGCCTGTGTAGCAAGC...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGGTGGAGAATTCTCTaGCACATTGCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIRWRIL*HIACSR
Trigger: CCTGCTACAGGCAATGTGGCAGAGAATTCTCCACCT...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTGAATCTGTTGTTTGGTaGCTCACTGTCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSESVVW*LTVIIK
Trigger: TTTGATGATGACAGTGAGGCACCAAACAACAGATTC...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR GCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTGGAGTACAGGAGGCTaGTCTGGGGGAGGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFWSTGG*SGGGLY
Trigger: ATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCCTCAGCCCACGCTTTaGCACTCAGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHPQPTL*HSAHLL
Trigger: AAGAAGATGAGCTGAGTGGCAAAGCGTGGGCTGAGG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAAGCTCGAGTGAAGCTTaGTCAGGCTCTGCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISSSSEA*SGSARH
Trigger: GTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCT...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCCCCACAGATTTGCAATaGCTTAAATGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCPTDLQ*LKWAIS
Trigger: GCTGATTGCCCATTTAAGGCATTGCAAATCTGTGGG...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTCGGCTTGTGTCTTCTaGATCGAAGGCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHSACVF*IEGLNL
Trigger: CAGGTTGAGGCCTTCGATCCAGAAGACACAAGCCGA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAGTTGAATCTGTTGTTTaGTGCCTCACTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRVESVV*CLTVII
Trigger: GATGATGACAGTGAGGCACCAAACAACAGATTCAAC...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAACTTTAGTTACCAGCTaGAGTTCTCCTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRTLVTS*SSPVLG
Trigger: TCCCAAGACAGGAGAACTCCAGCTGGTAACTAAAGT...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTGGCAGTGTCTGTGGATaGCTTTGGCCAATAGGACGA +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFGSVCG*LWPIGR
Trigger: TCGTCCTATTGGCCAAAGCCATCCACAGACACTGCC...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGTGTTTCCCCGGTCACTaGATCTATGGCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQCFPGH*IYGFSI
Trigger: GATGGAGAAGCCATAGATCCAGTGACCGGGGAAACA...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCAGCTCCCTGGTGGCTaGACTCTTTCCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFQLPGG*TLSILA
Trigger: TGCCAAAATGGAAAGAGTCCAGCCACCAGGGAGCTG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTGCCACCCTCATTTCTaGAACCCAGACCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFCHPHF*NPDQHP
Trigger: AGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCGTGATCTGCCCACCTTaGCAAAGTGCTGGCATTACA +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSVICPP*QSAGIT
Trigger: TGTAATGCCAGCACTTTGCCAAGGTGGGCAGATCAC...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTCACTTTGGAACTCTTTaGCAGATCCAGCAATTGCTC +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFHFGTL*QIQQLL
Trigger: GAGCAATTGCTGGATCTGCCAAAGAGTTCCAAAGTG...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTTCAACGCTGGGAAATTaGCTGTCTGTAACCAATCAG +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCSTLGN*LSVTNQ
Trigger: CTGATTGGTTACAGACAGCCAATTTCCCAGCGTTGA...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp TCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATaGGAAAGTTACATTTCCTATTCCATCATAATACCA +
Preference number: 4 (lower is better)
Translates to: SSEACSGSARHT*ESYISYSIIIP
Trigger: TGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp TTGCAACGTTGTAACTTCACCTTAGCCTCTGATTGGTaGCTTTTTGCAACCAATCAGATGTTTGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LQRCNFTLASDW*LFATNQMFAQE
Trigger: CTCCTGTGCAAACATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACGTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp AGTGGATCTTTCCACTTTCTGGCTCCAGTTTTTGAGTaGAATTCATATGTTTCCCCGGTCACTGGATCTATG +
Preference number: 4 (lower is better)
Translates to: SGSFHFLAPVFE*NSYVSPVTGSM
Trigger: CATAGATCCAGTGACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGATCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR TCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCAAATCAGGAAATAACTaGGGGGAATGTTTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCKSGNN*GECFGL
Trigger: CAAGCCGAAACATTCCCCTCAGTTATTTCCTGATTT...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCATTGACCCTGGATGTCTaGATCCCCTCAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISLTLDV*IPSAHI
Trigger: AATGTGGGCTGAGGGGATTCAGACATCCAGGGTCAA...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCGAAGAAGATTTGAGGTaGCTTACAAAGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCEEDLR*LTKVYG
Trigger: GCCATACACCTTTGTAAGTCACCTCAAATCTTCTTC...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACAGGCATGAGCCATCATaGCCTGCCTGTAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHRHEPS*PACSSL
Trigger: AAGTGAACTACAGGCAGGGCATGATGGCTCATGCCT...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTAGGCATGAGCCATCATaGCCTGCCTGTAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFRHEPS*PACSSL
Trigger: AAGTGAACTACAGGCAGGGCATGATGGCTCATGCCT...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTCACTCACTTTAACCTaGATAAATGAACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLSLTLT*INEQFC
Trigger: GCAGAACTGTTCATTTATGCAGGTTAAAGTGAGTGA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCGGGCCCCACAGATTTaGAATGCCTTAAATGGGCAA +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHRAPQI*NALNGQ
Trigger: TTGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGCACAATTCCCTCTTaGCCTGTCATCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLISTIPS*PVITGE
Trigger: TTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCT...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGAGTTTCTCGAGGCTTaGCTTGCGACTAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHEFLEA*LATRKT
Trigger: TGTCTTCCTAGTCGCAAGGCAAGCCTCGAGAAACTC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGGCCTCATTCTTTCTCTaGTTTGCTGGGCATTTTGTT +
Preference number: 4 (lower is better)
Translates to: RCNFTLASDWLLFATNQMASFFL*FAGHFV
Trigger: AACAAAATGCCCAGCAAAGCAGAGAAAGAATGAGGC...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTGTCACAATCTACTATaGAGTTTCAAAGTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: SNCNSQCLLLECESEPPLCHNLL*SFKVFD
Trigger: GTCGAAGACTTTGAAACTGCATAGTAGATTGTGACA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCTTTGAGTTGACTATCTaGGGAAATCCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCFELTI*GNPGIT
Trigger: TGTGATCCCAGGATTTCCCCAGATAGTCAACTCAAA...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGACCTCCACGATGAGATaGAAACTTCTGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQTSTMR*KLLCPA
Trigger: AGCAGGACACAGAAGTTTCCATCTCATCGTGGAGGT...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTGTAGAGGAGGTGGCTaGGAAAACCTTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLICRGGG*ENLHHQ
Trigger: CTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTCTTCCAGGGAAATGGTaGGATTTTGTCTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCLPGKW*DFVSIH
Trigger: GTGAATTGAGACAAAATCCCACCATTTCCCTGGAAG...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCTGAAGGTGAACTTTTaGCATGTGGCAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLILKVNF*HVAGLS
Trigger: CGACAATCCTGCCACATGCCAAAAGTTCACCTTCAG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CATGGTGAAGTTGAATCTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAAGTTGAATCTGTTGTTTaGTGCCTCACTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: HGEVESVVWCLTVIIKAEVESVV*CLTVII
Trigger: GATGATGACAGTGAGGCACCAAACAACAGATTCAAC...TTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTGCCACATCCTGCACCTaGATTATCACCGTATATTTA +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFATSCT*IITVYL
Trigger: TAAATATACGGTGATAATCCAGGTGCAGGATGTGGC...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACAGGAAATAAGAGTTTaGAGTACAAATTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LWPLSTIPSCPVITGEERQEIRV*STNWLF
Trigger: GAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTG...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAATTGTTGACGTTACCTaGGCCAATGGAATAACGGAA +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRIVDVT*ANGITE
Trigger: TTCCGTTATTCCATTGGCCCAGGTAACGTCAACAAT...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCCACGTACCATGCAGATaGAGAGTAAACGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVHVPCR*RVNVFP
Trigger: AGGAAAAACGTTTACTCTCCATCTGCATGGTACGTG...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGGGCAGTGTCTGTGGATaGCTTTGGCCAATAGGACGA +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQGSVCG*LWPIGR
Trigger: TCGTCCTATTGGCCAAAGCCATCCACAGACACTGCC...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCATGCCACCCTCATTTCTaGAACCCAGACCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISCHPHF*NPDQHP
Trigger: AGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCA...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCTGGATTTCTGTTCTTTaGGTTGCCCAGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIWISVL*VAQLAT
Trigger: GGTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCA...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGACCTGTTCATGAAGGCTaGATTTCTGTTCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRPVHEG*ISVLWV
Trigger: AACCCAAAGAACAGAAATCCAGCCTTCATGAACAGG...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGCCCCGTTTACTTTCCTaGGTGTGGTTTGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQPRLLS*VWFGVS
Trigger: GCTTACCCCAAACCACACCCAGGAAAGTAAACGGGG...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCTTGCCCTGTCATCACTaGAGAAGAAAGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCILPCHH*RRKTSC
Trigger: GCAGCTGGTCTTTCTTCTCCAGTGATGACAGGGCAA...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAAAAACTCCAAGAACTTaGACAACTTGCAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRKTPRT*TTCSQD
Trigger: GTCTTGACTGCAAGTTGTCCAAGTTCTTGGAGTTTT...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGACAATCAGACCAATTGTaGTCCACTACTTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRQSDQL*STTSFP
Trigger: TGGAAATGAAGTAGTGGACCACAATTGGTCTGATTG...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGACTTCAGTCTCTGATTaGTTGCTTCCTGCAACCAAT +
Preference number: 4 (lower is better)
Translates to: RCNFTLASDWLLFATNQMTSVSD*LLPATN
Trigger: ATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGT...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTGTGAAAGGGGGCTCTaGGGAGCAGAAGTGTCATTT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFCERGL*GAEVSF
Trigger: AAATGACACTTCTGCTCCCCAGAGCCCCCTTTCACA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317716.14
3UTR CAA 72 bp CAATTCACCTGCATCTCGGTCTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTGATTTATCATGAAATA +
Preference number: 4 (lower is better)
Translates to: QFTCISVYPLGH*DCTSQLIYHEI
Trigger: TATTTCATGATAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGGTAAGCCCTGTTCATaGAGGCTGGATTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHGKPCS*RLDFCS
Trigger: AGAACAGAAATCCAGCCTTCATGAACAGGGCTTACC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACACTACTTCATTTCCATaGGGTGAGCATGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHTTSFP*GEHEVA
Trigger: GGCCACTTCATGCTCACCTCATGGAAATGAAGTAGT...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGACCTTCTGCCAAGTTaGCTTGAAACTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISDLLPS*LETEVA
Trigger: AGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGGTC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCAAACGGCACGTACCATaGAGATGGAGAGTAAACGTT +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSKRHVP*RWRVNV
Trigger: AACGTTTACTCTCCATCTGCATGGTACGTGCCGTTT...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCACGACGTCTCTCTCTaGAGTCTTCGTTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFHDVSL*SLRFSF
Trigger: AAAGGAGAAACGAAGACTGCAGAGAGAGACGTCGTG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCGTTACCTGGGCCAATaGAATAACGGAAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFRYLGQ*NNGKIW
Trigger: CCAGATCTTTCCGTTATTCCATTGGCCCAGGTAACG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTTACTTTCCTGGGTGTaGTTTGGGGTAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHLLSWV*FGVSPV
Trigger: AACAGGGCTTACCCCAAACCACACCCAGGAAAGTAA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTTACTTTCCTGGGTGTaGTTTGGGGTAAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFLLSWV*FGVSPV
Trigger: AACAGGGCTTACCCCAAACCACACCCAGGAAAGTAA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTTCTGGCTCCAGTTTTTaGGTTGAATTCATATGTTTC +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFSGSSF*VEFICF
Trigger: GAAACATATGAATTCAACTCAAAAACTGGAGCCAGA...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCACAAACATCCCATGTTTaGCCCTGGATGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISQTSHV*PWMSES
Trigger: GGATTCAGACATCCAGGGTCAAACATGGGATGTTTG...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGACTTTTGAAGAAGATTTaGGGTGACTTACAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EEIWVMLKRGQENKVETRLLKKI*GDLQRC
Trigger: ACACCTTTGTAAGTCACCTCAAATCTTCTTCAAAAG...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTAATGAATCCAGGGTTTaGTCTTTCTACTATGTAGAG +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCNESRV*SFYYVE
Trigger: CTCTACATAGTAGAAAGAGCAAACCCTGGATTCATT...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTTGTCTCAATTCACCTaGATCTCGGTCTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSLSQFT*ISVYPL
Trigger: CAAAGGATAGACCGAGATGCAGGTGAATTGAGACAA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTCACCGTATATTTATTaGCGGCTGCTAGGTTACTTG +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLISPYIY*RLLGYL
Trigger: CAAGTAACCTAGCAGCCGGCAATAAATATACGGTGA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTTATTCCCAGTTCATTaGTCATGCCTACAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLILFPVH*SCLQVE
Trigger: TTCCACCTGTAGGCATGAGCAATGAACTGGGAATAA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGTGTAGAGGAGGTGGCTaGGAAAACCTTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQCRGGG*ENLHHQ
Trigger: CTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACA...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCGTTGAATCTGTTGTTTaGTGCCTCACTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSVESVV*CLTVII
Trigger: GATGATGACAGTGAGGCACCAAACAACAGATTCAAC...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGGCCACATCCTGCACCTaGATTATCACCGTATATTTA +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQATSCT*IITVYL
Trigger: TAAATATACGGTGATAATCCAGGTGCAGGATGTGGC...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTTCAAGGGAGTTCCCTaGCAACCAACCCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSFKGVP*QPTLIN
Trigger: ATTAATAAGGGTTGGTTGCCAGGGAACTCCCTTGAA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCACCTCAACCTGGTAAATaGATCCAGGGTTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISPQPGK*IQGLLF
Trigger: AAAGAGCAAACCCTGGATTCATTTACCAGGTTGAGG...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCTCCAGTTTTTGAGTTaGATTCATATGTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHLQFLS*IHMFPR
Trigger: CCGGGGAAACATATGAATTCAACTCAAAAACTGGAG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCAAAGAAGGTGCCTACTaGGTTTTCTTCTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSKEGAY*VFFFPD
Trigger: ATCTGGAAAGAAGAAAACTCAGTAGGCACCTTCTTT...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCAGAATGATTGCTTCCTaGATACTTGATGGTCACAAC +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSRMIAS*ILDGHN
Trigger: GTTGTGACCATCAAGTATGCAGGAAGCAATCATTCT...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTTGTCTCAATTCACCTaGATCTCGGTCTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHLSQFT*ISVYPL
Trigger: CAAAGGATAGACCGAGATGCAGGTGAATTGAGACAA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCTCACCGTATATTTATTaGCGGCTGCTAGGTTACTTG +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCISPYIY*RLLGYL
Trigger: CAAGTAACCTAGCAGCCGGCAATAAATATACGGTGA...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTAATTCTGAATATTTGTaGCAACTTTCAGATCCACTG +
Preference number: 4 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFNSEYL*QLSDPL
Trigger: CAGTGGATCTGAAAGTTGGCACAAATATTCAGAATT...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGATTCTTTCTCTGCTTTaGTGGGCATTTTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLILSLL*WAFCSI
Trigger: AATGGAACAAAATGCCCAGCAAAGCAGAGAAAGAAT...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTATCAAATACATAGGATaGCCTATCAAAAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: EIWVMLKRGQENKVETRCIKYIG*PIKNER
Trigger: CCTCTCATTTTTGATAGGCCATCCTATGTATTTGAT...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCATGATAGTGGTTGGGTaGGGAATGACTTTAATACTC +
Preference number: 4 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSMIVVG*GMTLIL
Trigger: GAGTATTAAAGTCATTCCCCACCCAACCACTATCAT...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCACGTACCATGCAGATaGAGAGTAAACGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFHVPCR*RVNVFP
Trigger: AGGAAAAACGTTTACTCTCCATCTGCATGGTACGTG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTCCTGTTCATGAAGGCTaGATTTCTGTTCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFPVHEG*ISVLWV
Trigger: AACCCAAAGAACAGAAATCCAGCCTTCATGAACAGG...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCGGCAGGAAAATAAGGTaGAAACCAGATGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIGRKIR*KPDVRI
Trigger: TATCCTTACATCTGGTTTCCACCTTATTTTCCTGCC...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTTGCAATGCCTTAAATaGGCAATCAGCCACTTCACT +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFLQCLK*AISHFT
Trigger: AGTGAAGTGGCTGATTGCCCATTTAAGGCATTGCAA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAAGAAGATTTGAGGTaGCTTACAAAGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISEEDLR*LTKVYG
Trigger: GCCATACACCTTTGTAAGTCACCTCAAATCTTCTTC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGAATGCTTCTTTTGCTTaGGAAGTGACACTGGCACTA +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQNASFA*EVTLAL
Trigger: TAGTGCCAGTGTCACTTCTCAAGCAAAAGAAGCATT...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGCTTTCATTCTTTCGTTaGCTCATTCTTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQLSFFR*LILSLL
Trigger: AAGCAGAGAAAGAATGAGGCAACGAAAGAATGAAAG...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGCTTCCAGGGAAATGGTaGGATTTTGTCTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQLPGKW*DFVSIH
Trigger: GTGAATTGAGACAAAATCCCACCATTTCCCTGGAAG...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTTCCATTTTGGCATTTaGGTTAGTGGATCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFFHFGI*VSGSFH
Trigger: GTGGAAAGATCCACTAACCCAAATGCCAAAATGGAA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR GCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGGAATCTGTTGTTTGGTaGCTCACTGTCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQESVVW*LTVIIK
Trigger: TTTGATGATGACAGTGAGGCACCAAACAACAGATTC...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR GCA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAATCTGTTGTTTGGTaGCTCACTGTCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISESVVW*LTVIIK
Trigger: TTTGATGATGACAGTGAGGCACCAAACAACAGATTC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CCA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTATAACTGAAGAAATCTaGGTGATGTTAAAACGAGGG +
Preference number: 4 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFITEEI*VMLKRG
Trigger: CCCTCGTTTTAACATCACCCAGATTTCTTCAGTTAT...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR TCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGGTCAGCTTGAAATTCTaGATATTTGTGCCAACTTTC +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQVSLKF*IFVPTF
Trigger: GAAAGTTGGCACAAATATTCAGAATTTCAAGCTGAC...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR TCA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGCTTTTGAAGAAGATTTaGGGTGACTTACAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQLLKKI*GDLQRC
Trigger: ACACCTTTGTAAGTCACCTCAAATCTTCTTCAAAAG...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CCA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATCAAATACATAGGATaGCCTATCAAAAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIIKYIG*PIKNER
Trigger: CCTCTCATTTTTGATAGGCCATCCTATGTATTTGAT...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS CCA 90 bp GCGCCTCGCGTTGGGCGACAGGGACGCGGGGAGAGAGCGACAAGCTaGAAGCAAGGGCTGCCTGCAAAACTTTCGGTCCTCCAGCGGCAA +
Preference number: 5 (lower is better)
Translates to: APRVGRQGRGERATS*KQGLPAKLSVLQRQ
Trigger: TTGCCGCTGGAGGACCGAAAGTTTTGCAGGCAGCCCTTGCTTCCAGCTTGTCGCTCTCTCCCCGCGTCCCTGTCGCCCAACGCGAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470188.5
ENST00000474330.1
ENST00000487084.1
CDS GCA 90 bp GGCGACAGGGACGCGGGGAGAGAGCGACAAGCTGGAAGCAAGGGCTaGCTGCAAAACTTTCGGTCCTCCAGCGGCAACTCTGCGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GDRDAGRERQAGSKG*LQNFRSSSGNSAGK
Trigger: CTTTCCCGCAGAGTTGCCGCTGGAGGACCGAAAGTTTTGCAGGCAGCCCTTGCTTCCAGCTTGTCGCTCTCTCCCCGCGTCCCTGTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470188.5
ENST00000474330.1
ENST00000487084.1
CDS CCA 90 bp TGGAGGCTGGCCCCTCCAGTGGAGATGGAGTACAGGAGGCTGCTCTaGGGGAGGTCTTTATCAGTGGCTCGCACCTGTCCCACTCGGGTT +
Preference number: 5 (lower is better)
Translates to: WRLAPPVEMEYRRLL*GRSLSVARTCPTRV
Trigger: AACCCGAGTGGGACAGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCATCTCCACTGGAGGGGCCAGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS GCA 90 bp GATACTGGAGGCTGGCCCCTCCAGTGGAGATGGAGTACAGGAGGCTaGTCTGGGGGAGGTCTTTATCAGTGGCTCGCACCTGTCCCACTC +
Preference number: 5 (lower is better)
Translates to: DTGGWPLQWRWSTGG*SGGGLYQWLAPVPL
Trigger: GAGTGGGACAGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCATCTCCACTGGAGGGGCCAGCCTCCAGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 90 bp TGGAGATGGAGTACAGGAGGCTGCTCTGGGGGAGGTCTTTATCAGTaGCTCGCACCTGTCCCACTCGGGTTCTGGCGGGCCTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: WRWSTGGCSGGGLYQ*LAPVPLGFWRAFFL
Trigger: CAGAAAGAAGGCCCGCCAGAACCCGAGTGGGACAGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS TCA 90 bp ATGGGGCTCCAGCTCAAGGCGCTTTTGTGTGGCTTTCGCTCAGGTTaGGTCCGCCCACACTGCAAACCAAGCACCTCTGGAGCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: MGLQLKALLCGFRSG*VRPHCKPSTSGAEQ
Trigger: TTGCTCTGCTCCAGAGGTGCTTGGTTTGCAGTGTGGGCGGACTCAACCTGAGCGAAAGCCACACAAAAGCGCCTTGAGCTGGAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS CCA 90 bp CTGGTAAAGCGAGGGACTTCGTCGTTGAGGTTCACGATGTTCACCTaGAGCTCTGTGGAGGCTTTGAGGCCTCCACTGTCCCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: LVKRGTSSLRFTMFT*SSVEALRPPLSLTS
Trigger: GGAGGTGAGGGACAGTGGAGGCCTCAAAGCCTCCACAGAGCTCCAGGTGAACATCGTGAACCTCAACGACGAAGTCCCTCGCTTTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 90 bp GTCAGAGGTTCCTTGTTCTTCCCAGTCTTGCAGGGGCAGTGTCTGTaGATGGCTTTGGCCAATAGGACGACCAGGTACACGAGGAGACCC +
Preference number: 5 (lower is better)
Translates to: VRGSLFFPVLQGQCL*MALANRTTRYTRRP
Trigger: GGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGGAACCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS-3UTR CAA 90 bp AGCTTGCCACCCTCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGTCCTCAGCCCACGCTTaGCCACTCAGCTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: SLPPSFLEPRPASSAHALSSAHA*PLSSSS
Trigger: AGAAGATGAGCTGAGTGGCAAAGCGTGGGCTGAGGA...CAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS CCA 90 bp GAGGTTCCTTGTTCTTCCCAGTCTTGCAGGGGCAGTGTCTGTGGATaGCTTTGGCCAATAGGACGACCAGGTACACGAGGAGACCCAGAA +
Preference number: 5 (lower is better)
Translates to: EVPCSSQSCRGSVCG*LWPIGRPGTRGDPE
Trigger: TTCTGGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS-3UTR CAA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATCCTCCTGGCGCACTCTaGCCCCTATTTCTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: AAGHRARVKLAQALLGTHPPGAL*PLFLEF
Trigger: AAACTCAAGAAATAGGGGCAAGAGTGCGCCAGGAGG...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS TCA 90 bp CCCAGTGGTGACAACCTGACATGGCACCCAGGAGAGCCAGGAGAATaGTTGCTTCCTGCATACTTGATGGTCACAACTGTGCGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PSGDNLTWHPGEPGE*LLPAYLMVTTVRAS
Trigger: GGAAGCACGCACAGTTGTGACCATCAAGTATGCAGGAAGCAATCATTCTCCTGGCTCTCCTGGGTGCCATGTCAGGTTGTCACCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000478080.5
CDS GCA 90 bp CCCCCTGACATGGCACCCAGGAGAGCCAGGAGAATGATTGCTTCCTaGATACTTGATGGTCACAACTGTGCGTGCTTCCAGCACATTAGC +
Preference number: 5 (lower is better)
Translates to: PPDMAPRRARRMIAS*ILDGHNCACFQHIS
Trigger: GCTAATGTGCTGGAAGCACGCACAGTTGTGACCATCAAGTATGCAGGAAGCAATCATTCTCCTGGCTCTCCTGGGTGCCATGTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS CCA 90 bp TTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTaGACTCAGTTCCTCCAGGACTGTGTACACTCGTGTCGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: FIIRILRCDIGHDGS*TQFLQDCVHSCRAG
Trigger: ACCAGCCCGACACGAGTGTACACAGTCCTGGAGGAACTGAGTCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 90 bp CCTTGTTCTTCCCAGTCTTGCAGGGGCAGTGTCTGTGGATGGCTTTaGCCAATAGGACGACCAGGTACACGAGGAGACCCAGAAGCAATA +
Preference number: 5 (lower is better)
Translates to: PCSSQSCRGSVCGWL*PIGRPGTRGDPEAI
Trigger: TATTGCTTCTGGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS-3UTR CAA 90 bp TGTCTAGATGGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCACGAGGGACTTCGTCGTaGAGGTTCACGATGTTCACC +
Preference number: 5 (lower is better)
Translates to: CLDGASSMSPLRVLQFLPRGTSS*RFTMFT
Trigger: GGTGAACATCGTGAACCTCAACGACGAAGTCCCTCG...TGGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp ATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCATCTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: ISGTQTSILSPRFATQLIWHVAG*SLTSST
Trigger: TGTGGAAGACGTCAACGACAATCCTGCCACATGCCA...GATGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CAA 90 bp GCAGCAGGGCATAGAGCTCGAGTGAAGCTTGCTCAGGCTCTGCTAGGCACACATAAGCACAATTCCCTCTaGCCCTGTCATCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: AAGHRARVKLAQALLGTHKHNSL*PCHHWR
Trigger: TCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTT...ATGTGTGCCTAGCAGAGCCTGAGCAAGCTTCACTCGAGCTCTATGCCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTACTGTATCTGGGCCCTaGAGTCACTTGCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVTVSGP*SHLLRP
Trigger: GGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGT...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS CCA 90 bp CTGATAGGTGACCCTGGGCCTGGGGGTCGTGGTGATGATAGTGGTTaGGTGGGGAATGACTTTAATACTCAGTGTCACTGTTCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LIGDPGPGGRGDDSG*VGNDFNTQCHCSCL
Trigger: GAGACAGGAACAGTGACACTGAGTATTAAAGTCATTCCCCACCCAACCACTATCATCACCACGACCCCCAGGCCCAGGGTCACCTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 90 bp TGTACACTCGTGTCGGGCTTCTGCCAAGTTGCCTTGAAACTGAGGTaGCTCGTTCACATCTGTTACCTGGACAGTCAGGACTTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CTLVSGFCQVALKLR*LVHICYLDSQDLQV
Trigger: GACCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGCCCGACACGAGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS CCA 90 bp TTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTaGACTCAGTTCCTCCAGGACTGTGTACACTCGTGTCGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FIIRILRCDIGHDGS*TQFLQDCVHSCRAS
Trigger: AGAAGCCCGACACGAGTGTACACAGTCCTGGAGGAACTGAGTCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CAA 90 bp CACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTCTGGACAGTCAGGACTaGCAGGTCTGTGACACCAAC +
Preference number: 5 (lower is better)
Translates to: HLHLGLSFGPLGLYQSSGLDSQD*QVCDTN
Trigger: GTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAG...ACCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CAA 90 bp GCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AGKTFIIRILRCDIGHDGSSAVI*ATMVPG
Trigger: TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGA...ACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CAA 90 bp TCATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCAGTGGCAGGATTGTCGTaGACGTCTTCCACAATGAAG +
Preference number: 5 (lower is better)
Translates to: SFLEPRPASSAHALPLSSVAGLS*TSSTMK
Trigger: CTTCATTGTGGAAGACGTCAACGACAATCCTGCCAC...TGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CAA 90 bp ATTTCTGGAACCCAGACCAGCATCCTCAGCCCACGCTTTGCCACTCAGCTCATCGCTGAAGGTGAACTTTaGGCATGTGGCAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: ISGTQTSILSPRFATQLIAEGEL*ACGRIV
Trigger: GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGC...GATGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS TCA 90 bp CTAGCTAGTTATCCTCCTAACCAGCATTATGGGTACCTCCAGCTTTaGTTCCACCCCTACCTGTGTACCCAGCTACACTCAGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LASYPPNQHYGYLQL*FHPYLCTQLHSARP
Trigger: AGGCCTGGCTGAGTGTAGCTGGGTACACAGGTAGGGGTGGAATCAAAGCTGGAGGTACCCATAATGCTGGTTAGGAGGATAACTAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS GCA 90 bp CAACCTGACATGGCACCCAGGAGAGCCAGGAGAATGATTGCTTCCTaGATACTTGATGGTCACAACTGTGCGTGCTTCCAGCACATTAGC +
Preference number: 5 (lower is better)
Translates to: QPDMAPRRARRMIAS*ILDGHNCACFQHIS
Trigger: GCTAATGTGCTGGAAGCACGCACAGTTGTGACCATCAAGTATGCAGGAAGCAATCATTCTCCTGGCTCTCCTGGGTGCCATGTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478080.5
CDS CCA 90 bp CCCAGTGGGAGTGAGAATCGCCAGGCAGAGCTCCAGGGATCTTCGTaGCAGTCGTTACATCTTCTGTCTATGAAAGTGAAGCAATGCCTT +
Preference number: 5 (lower is better)
Translates to: PSGSENRQAELQGSS*QSLHLLSMKVKQCL
Trigger: AAGGCATTGCTTCACTTTCATAGACAGAAGATGTAACGACTGCCACGAAGATCCCTGGAGCTCTGCCTGGCGATTCTCACTCCCACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTAGCTCTGTGGAGGCTTaGAGGCCTCCACTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLSSVEA*RPPLSL
Trigger: GAGGGACAGTGGAGGCCTCAAAGCCTCCACAGAGCT...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACTCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RHHNAEGELLACGRIVVDSSAVI*ATMVPG
Trigger: TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGA...GTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp GAGGAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCGTGGCAGGATTGTCGTaGACGTCTTCCACAATGAAG +
Preference number: 5 (lower is better)
Translates to: EEVAGKTFIIRILRCDIGVAGLS*TSSTMK
Trigger: CTTCATTGTGGAAGACGTCAACGACAATCCTGCCAC...GCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp TCTTTCCGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCAGAAGCAACGTCCCCTaGGCTGTTCTTTCCGGCACC +
Preference number: 5 (lower is better)
Translates to: SFRHHNAEGELLACGRIVRSNVP*AVLSGT
Trigger: GGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCT...GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCTCTTGCCCCTATTTCTaGAGTTTCTCGAGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGSCPYF*SFSRLA
Trigger: GGCAAGCCTCGAGAAACTCAAGAAATAGGGGCAAGA...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS CCA 90 bp CATCCCAGTGGTGACAACCTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTCCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: HPSGDNLRFRTTSTH*FQLLEQQLQNLHGP
Trigger: TGGACCATGGAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGGTTGTCACCACTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CAA 90 bp GAGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACTTGCTTCCTGCATACTaGATGGTCACAACTGTGCGT +
Preference number: 5 (lower is better)
Translates to: EVAGKTFIIRILRCDIGHLLPAY*MVTTVR
Trigger: ACGCACAGTTGTGACCATCAAGTATGCAGGAAGCAA...GTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGATCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LWPLSTIPSCPVITGEERSSAVI*ATMVPG
Trigger: TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGA...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGGATGGCATGGTGAAGTaGAATCTGTTGTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RWLGKPSSSGSSAVILATDGMVK*NLLFGA
Trigger: GGCACCAAACAACAGATTCAACTTCACCATGCCATC...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCTCCACCGGTGACACTTaGACTTCTGGATTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTSTGDT*TSGFPR
Trigger: TCGGGGAAATCCAGAAGTCAAAGTGTCACCGGTGGA...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS CCA 90 bp CAATATGGAGCCCAAAGTGATGACAAACGGCACGTACCATGCAGATaGAGAGTAAACGTTTTTCCTCAGGACCTGATAGGTGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: QYGAQSDDKRHVPCR*RVNVFPQDLIGDPG
Trigger: CCCAGGGTCACCTATCAGGTCCTGAGGAAAAACGTTTACTCTCCATCTGCATGGTACGTGCCGTTTGTCATCACTTTGGGCTCCATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTTGCTTCCTGCATACTaGATGGTCACAACTGTGCGT +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVLLPAY*MVTTVR
Trigger: ACGCACAGTTGTGACCATCAAGTATGCAGGAAGCAA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AAGCAGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCGAATTCTCTGCCACATaGCCTGTAGCAGGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: KQNLFRSRSNVPLAVLSGEFSAT*PVAGKR
Trigger: CCTCTTACCTGCTACAGGCAATGTGGCAGAGAATTC...GCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CCACTTGGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGGCTGGGAAATTCTGCCAAGTTGCCTaGAAACTGAGGTGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: PLGLYQSSGNAVEEVAGKFCQVA*KLRWLV
Trigger: AACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAA...TTTCCCAGCCACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CAA 90 bp CTTGGATTGTACCAGTCAAGTGGTAATGCTGTAGAGGAGGTGGCTGGGAAAACCATCTCGGTCTATCCTTaGGGCCACTTGGATTGTACC +
Preference number: 5 (lower is better)
Translates to: LGLYQSSGNAVEEVAGKTISVYP*GHLDCT
Trigger: GGTACAATCCAAGTGGCCCAAAGGATAGACCGAGAT...GGTTTTCCCAGCCACCTCCTCTACAGCATTACCACTTGACTGGTACAATCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS-3UTR CAA 90 bp AGAACTTGTTTAGGTCAAGAAGCAACGTCCCCTTGGCTGTTCTTTCCGGCACCAATCTCGGTCTATCCTTaGGGCCACTTGGATTGTACC +
Preference number: 5 (lower is better)
Translates to: RTCLGQEATSPWLFFPAPISVYP*GHLDCT
Trigger: GGTACAATCCAAGTGGCCCAAAGGATAGACCGAGAT...TGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCGTGGCAGGATTGTCGTaGACGTCTTCCACAATGAAG +
Preference number: 5 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTVAGLS*TSSTMK
Trigger: CTTCATTGTGGAAGACGTCAACGACAATCCTGCCAC...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAAGAAGCAACGTCCCCTaGGCTGTTCTTTCCGGCACC +
Preference number: 5 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRRSNVP*AVLSGT
Trigger: GGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCT...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTGATGGCATGGTGAAGTaGAATCTGTTGTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVDGMVK*NLLFGA
Trigger: GGCACCAAACAACAGATTCAACTTCACCATGCCATC...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAAGTGGTATCCTTTGGGCCACTaGGATTGTACCAGTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SPASRSILWATWIVPVKWYPLGH*DCTSQV
Trigger: CACTTGACTGGTACAATCCAAGTGGCCCAAAGGATA...CCACTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS CCA 90 bp GGATTGTACCAGTCAACTGAGGGGAATGTTTCGGCTTGTGTCTTCTaGATCGAAGGCCTCAACCTGGTAAATGAATCCAGGGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLYQSTEGNVSACVF*IEGLNLVNESRVCS
Trigger: AGAGCAAACCCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACACAAGCCGAAACATTCCCCTCAGTTGACTGGTACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000470188.5
CDS CCA 90 bp TCAAGTGATCACAGCTCTCTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTCCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: SSDHSSLRFRTTSTH*FQLLEQQLQNLHGP
Trigger: TGGACCATGGAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGAGAGCTGTGATCACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS-3UTR CAA 90 bp CATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAACTGATTTATCACTGGACAGTCAGGACTaGCAGGTCTGTGACACCAAC +
Preference number: 5 (lower is better)
Translates to: HLGLSFGPLGLYQSTDLSLDSQD*QVCDTN
Trigger: GTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAG...TGATAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp AGGTGGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGTTTGGGCCACTTGGATaGTACCAGTCAACTGATTTA +
Preference number: 5 (lower is better)
Translates to: RWLGKPSSSGSSAVILATFGPLG*YQSTDL
Trigger: TAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAA...CGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp CTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGACCTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTG +
Preference number: 5 (lower is better)
Translates to: LAIKHNSLLPCHHWRRKTYPLGH*DCTSQL
Trigger: CAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATA...GGTCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CGGCACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTG +
Preference number: 5 (lower is better)
Translates to: RHHNAEGELLACGRIVVDYPLGH*DCTSQL
Trigger: CAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATA...GTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSWHVAG*SLTSST
Trigger: TGTGGAAGACGTCAACGACAATCCTGCCACATGCCA...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCAGAAGCAACGTCCCCTaGGCTGTTCTTTCCGGCACC +
Preference number: 5 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVRSNVP*AVLSGT
Trigger: GGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCT...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CAA 90 bp GCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTGTGAAGTTGAATCTGTaGTTTGGTGCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: AGKTFIIRILRCDIGHDGVKLNL*FGASLS
Trigger: TGACAGTGAGGCACCAAACAACAGATTCAACTTCAC...ACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp TGTCTAGATGGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCAGCTCCAGTTTTTGAGTaGAATTCATATGTTTCCCCG +
Preference number: 5 (lower is better)
Translates to: CLDGASSMSPLRVLQFLPAPVFE*NSYVSP
Trigger: CGGGGAAACATATGAATTCAACTCAAAAACTGGAGC...TGGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CCACTCAGAGTCCTGCAGTTCCTTCCAATCATAGGAAGTGGGAAGGAGCAAGGCAAGGATAGAGAGCAATaGCAACTCTCAGTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PLRVLQFLPIIGSGKEQGKDREQ*QLSVFA
Trigger: AGCAAACACTGAGAGTTGCAATTGCTCTCTATCCTT...GCCTTGCTCCTTCCCACTTCCTATGATTGGAAGGAACTGCAGGACTCTGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTTCCAAGGAAAGCATTaGACTCCGGGCCCCACAGAT +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLFQGKH*TPGPTD
Trigger: ATCTGTGGGGCCCGGAGTCAAATGCTTTCCTTGGAA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTTCTCGAGGCTTGCCTaGCGACTAGGAAGACACTCA +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLFSRLA*RLGRHS
Trigger: TGAGTGTCTTCCTAGTCGCAAGGCAAGCCTCGAGAA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS GCA 90 bp CAGAAGCAATATGGAGCCCAAAGTGATGACAAACGGCACGTACCATaGAGATGGAGAGTAAACGTTTTTCCTCAGGACCTGATAGGTGAC +
Preference number: 5 (lower is better)
Translates to: QKQYGAQSDDKRHVP*RWRVNVFPQDLIGD
Trigger: GTCACCTATCAGGTCCTGAGGAAAAACGTTTACTCTCCATCTGCATGGTACGTGCCGTTTGTCATCACTTTGGGCTCCATATTGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS GCA 90 bp GAGGGCCACCAAAGAGATAGAATGTCCAGCCCAACTTTCAAAGTGTaGATACCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTT +
Preference number: 5 (lower is better)
Translates to: EGHQRDRMSSPTFKV*IPEGELLACGRIVV
Trigger: AACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGAAAGTTGGGCTGGACATTCTATCTCTTTGGTGGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTTTGGGCCACTTGGATaGTACCAGTCAACTGATTTA +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVFGPLG*YQSTDL
Trigger: TAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTGGAGGAAATGGTGGGATTTaGTCTCAATTCACCTGCATC +
Preference number: 5 (lower is better)
Translates to: KPSSSGSSAVILATMVPGGNGGI*SQFTCI
Trigger: GATGCAGGTGAATTGAGACAAAATCCCACCATTTCC...TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CAA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGATGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRWHVAG*SLTSST
Trigger: TGTGGAAGACGTCAACGACAATCCTGCCACATGCCA...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTTGTCTGTGGATGGCTTaGGCCAATAGGACGACCAGG +
Preference number: 5 (lower is better)
Translates to: EIWVMLKRGQENKVETRCCLWMA*ANRTTR
Trigger: CCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACA...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTGGTGATCTGCCCACCTaGGCAAAGTGCTGGCATTAC +
Preference number: 5 (lower is better)
Translates to: EIWVMLKRGQENKVETRCGDLPT*AKCWHY
Trigger: GTAATGCCAGCACTTTGCCAAGGTGGGCAGATCACC...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTCATTCTTTCTCTGCTTaGCTGGGCATTTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVHSFSA*LGILFH
Trigger: ATGGAACAAAATGCCCAGCAAAGCAGAGAAAGAATG...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CTCTGGCCATTAAGCACAATTCCCTCTTGCCCTGTCATCACTGGAGAAGAAAGAGTCAACGCTGGGAAATaGGCTGTCTGTAACCAATCA +
Preference number: 5 (lower is better)
Translates to: LWPLSTIPSCPVITGEERVNAGK*AVCNQS
Trigger: TGATTGGTTACAGACAGCCAATTTCCCAGCGTTGAC...TCTTTCTTCTCCAGTGATGACAGGGCAAGAGGGAATTGTGCTTAATGGCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTTTTGGGCCACTTGGATaGTACCAGTCAAGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: LGKPSSSGSSAVILATMVFGPLG*YQSSGN
Trigger: ATTACCACTTGACTGGTACAATCCAAGTGGCCCAAA...AACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS TCA 90 bp AACGGAAAGATCTGGGGCTGGAATCAAGGTCGGTACATGTCAGCTTaGAATTCTGAATATTTGTGCCAACTTTCAGATCCACTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NGKIWGWNQGRYMSA*NSEYLCQLSDPLGG
Trigger: CCCTCCCAGTGGATCTGAAAGTTGGCACAAATATTCAGAATTTCAAGCTGACATGTACCGACCTTGATTCCAGCCCCAGATCTTTCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000468477.1
ENST00000478080.5
CDS GCA 90 bp GGGATCACAGGTGACAATGATGCTGATAACTTCACAGAAAACTTGTaGACTGAAGTCCCAGGTGGAGAATTCTCTGCCACATTGCCTGTA +
Preference number: 5 (lower is better)
Translates to: GITGDNDADNFTENL*TEVPGGEFSATLPV
Trigger: TACAGGCAATGTGGCAGAGAATTCTCCACCTGGGACTTCAGTGCACAAGTTTTCTGTGAAGTTATCAGCATCATTGTCACCTGTGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000470188.5
ENST00000496633.1
CDS CCA 90 bp TGTCCAGCCCAACTTTCAAAGTGTGCATACCTGAAGGTGAACTTTTaGCATGTGGCAGGATTGTCGTTGACGTCTTCCACAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: CPAQLSKCAYLKVNF*HVAGLSLTSSTMKV
Trigger: AACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGAAAGTTGGGCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS-3UTR CAA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGATTCTGCCAAGTTGCCTaGAAACTGAGGTGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRFCQVA*KLRWLV
Trigger: AACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAA...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCGGGGAATGTTTCGGCTaGTGTCTTCTGGATCGAAGG +
Preference number: 5 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCGECFG*CLLDRR
Trigger: CCTTCGATCCAGAAGACACAAGCCGAAACATTCCCC...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CATCTCGGTCTATCCTTTGGGCCACTTGGATTGTACCAGTCAACTGATTTATCAGCTGAAGGTGAACTTTaGGCATGTGGCAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: HLGLSFGPLGLYQSTDLSAEGEL*ACGRIV
Trigger: GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGC...TGATAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp TGTCTAGATGGGGCTTCCAGTATGTCCCCACTCAGAGTCCTGCAGTTCCTTCCAACTCATTTTCTGGGCTaGTTAGGATATAAACGTAGA +
Preference number: 5 (lower is better)
Translates to: CLDGASSMSPLRVLQFLPTHFLG*LGYKRR
Trigger: TCTACGTTTATATCCTAACAAGCCCAGAAAATGAGT...TGGAAGGAACTGCAGGACTCTGAGTGGGGACATACTGGAAGCCCCATCTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGGAGCTTGTGTCTTCGTaGTTGGTGGCCTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: RCNFTLASDWLLFATNQMELVSS*LVAWIL
Trigger: CAGAATCCAGGCCACCAACAACGAAGACACAAGCTC...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGTCCTCAGCCCACGCTTaGCCACTCAGCTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLSSAHA*PLSSSS
Trigger: AGAAGATGAGCTGAGTGGCAAAGCGTGGGCTGAGGA...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCCTGGATTTCTGTTCTTaGGGTTGCCCAGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCLDFCS*GCPACH
Trigger: GTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCAG...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCCTGGATTTCTGTTCTTaGGGTTGCCCAGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVLDFCS*GCPACH
Trigger: GTGGCAAGCTGGGCAACCCAAAGAACAGAAATCCAG...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CAA 90 bp ATTTGGACTGAGAAGACTGTATCTGGGCCCTTGAGTCACTTGCTCAGGCCCGTTTCTGCTAGGCACACATaGGAAAGTTACATTTCCTAT +
Preference number: 5 (lower is better)
Translates to: IWTEKTVSGPLSHLLRPVSARHT*ESYISY
Trigger: ATAGGAAATGTAACTTTCCAATGTGTGCCTAGCAGA...AACGGGCCTGAGCAAGTGACTCAAGGGCCCAGATACAGTCTTCTCAGTCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTTTCAGGAAGTCCCTCTaGGTGCCTGACTTAAATCTC +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLFRKSL*VPDLNL
Trigger: GAGATTTAAGTCAGGCACCAAGAGGGACTTCCTGAA...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCGTGAGCCACCCGTGCTaGCTACACAGGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIVSHPC*LHRLSF
Trigger: GAAACTCAGCCTGTGTAGCAAGCACGGGTGGCTCAC...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS TCA 90 bp TGTTTCGGCTTGTGTCTTCTGGATCGAAGGCCTCAACCTGGTAAATaGATCCAGGGTTTGCTCTTTCTACTATGTAGAGGTGTAGACCTT +
Preference number: 5 (lower is better)
Translates to: CFGLCLLDRRPQPGK*IQGLLFLLCRGVDL
Trigger: AAGGTCTACACCTCTACATAGTAGAAAGAGCAAACCCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACACAAGCCGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
CDS CCA 90 bp CCTTTACAAAAAGAAGAACTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTCCATGGTCCA +
Preference number: 5 (lower is better)
Translates to: PLQKEELRFRTTSTH*FQLLEQQLQNLHGP
Trigger: TGGACCATGGAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGTTCTTCTTTTTGTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470188.5
CDS-3UTR CAA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAGAATTCTCTGCCACATaGCCTGTAGCAGGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: EEIWVMLKRGQENKVETREFSAT*PVAGKR
Trigger: CCTCTTACCTGCTACAGGCAATGTGGCAGAGAATTC...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CTGTTGTTTGGTGCCTCACTGTCATCATCAAAGCAGAACTTGTTTAGGTCAAGATTCTGCCAAGTTGCCTaGAAACTGAGGTGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: LLFGASLSSSKQNLFRSRFCQVA*KLRWLV
Trigger: AACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAA...TCTTGACCTAAACAAGTTCTGCTTTGATGATGACAGTGAGGCACCAAACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp GAAGAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGAATCTCGGTCTATCCTTaGGGCCACTTGGATTGTACC +
Preference number: 5 (lower is better)
Translates to: EEIWVMLKRGQENKVETRISVYP*GHLDCT
Trigger: GGTACAATCCAAGTGGCCCAAAGGATAGACCGAGAT...TCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp ACCATAATGCTGAAGGTGAACTTTTGGCATGTGGCAGGATTGTCGTTGACGTCTGGAAATGGTGGGATTTaGTCTCAATTCACCTGCATC +
Preference number: 5 (lower is better)
Translates to: TIMLKVNFWHVAGLSLTSGNGGI*SQFTCI
Trigger: GATGCAGGTGAATTGAGACAAAATCCCACCATTTCC...AGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGCATTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp AAACCTTCATCATCAGGATCCTCCGCTGTGATATTGGCCACGATGGTTCCTGGATCATCAAAGCAGAACTaGTTTAGGTCAAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: KPSSSGSSAVILATMVPGSSKQN*FRSRSN
Trigger: GTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATGA...TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496633.1
CDS-3UTR CAA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCCTTGTGTCTTCGTTGTaGGTGGCCTGGATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCLVSSL*VAWILR
Trigger: TCTCAGAATCCAGGCCACCAACAACGAAGACACAAG...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTTGTTCTTCCCAGTCTaGCAGGGGCAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSLFFPV*QGQCLW
Trigger: CCACAGACACTGCCCCTGCAAGACTGGGAAGAACAA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTTGTTCTTCCCAGTCTaGCAGGGGCAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: CKEETQQFHTPKLTVLLILFFPV*QGQCLW
Trigger: CCACAGACACTGCCCCTGCAAGACTGGGAAGAACAA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS TCA 90 bp GCTCGTTCACATCTGTTACCTGGACAGTCAGGACTTGCAGGTCTGTaGCACCAACCTCATCCTTCACATAAATCTGCAAATCAAATATGT +
Preference number: 5 (lower is better)
Translates to: ARSHLLPGQSGLAGL*HQPHPSHKSANQIC
Trigger: ACATATTTGATTTGCAGATTTATGTGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAACGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCTGGACAGTCAGGACTaGCAGGTCTGTGACACCAAC +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHLDSQD*QVCDTN
Trigger: GTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp ACCTTTGTAACTCCACTTCAGTCTCTGATTGGTTGCTTCCTGCAACCAATCAGAGTGAAGTTGAATCTGTaGTTTGGTGCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: TFVTPLQSLIGCFLQPIRVKLNL*FGASLS
Trigger: TGACAGTGAGGCACCAAACAACAGATTCAACTTCAC...TCTGATTGGTTGCAGGAAGCAACCAATCAGAGACTGAAGTGGAGTTACAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTGTCTGTGGATGGCTTaGGCCAATAGGACGACCAGG +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHCLWMA*ANRTTR
Trigger: CCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGGTGATCTGCCCACCTaGGCAAAGTGCTGGCATTAC +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHGDLPT*AKCWHY
Trigger: GTAATGCCAGCACTTTGCCAAGGTGGGCAGATCACC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTAAATGCTTCTTTTGCTaGAGAAGTGACACTGGCACT +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLKCFFC*RSDTGT
Trigger: AGTGCCAGTGTCACTTCTCAAGCAAAAGAAGCATTT...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACCCGGGCCCCACAGATTaGCAATGCCTTAAATGGGCA +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHPGPTD*QCLKWA
Trigger: TGCCCATTTAAGGCATTGCAAATCTGTGGGGCCCGG...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS TCA 90 bp CTCCTCAGACTGAAAGATGAAAAAGAATCATCCATACAGCACCTATaGGGCCATGAGGAAATGGGAATTCTCATACACCCTGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: LLRLKDEKESSIQHL*GHEEMGILIHPGKV
Trigger: AACTTTGCCAGGGTGTATGAGAATTCCCATTTCCTCATGGCCTCATAGGTGCTGTATGGATGATTCTTTTTCATCTTTCAGTCTGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS-3UTR CAA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCATCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISSSAVI*ATMVPG
Trigger: TCCAGGAACCATCGTGGCCAATATCACAGCGGAGGA...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTGTGAAGTTGAATCTGTaGTTTGGTGCCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: EIWVMLKRGQENKVETRCVKLNL*FGASLS
Trigger: TGACAGTGAGGCACCAAACAACAGATTCAACTTCAC...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp TCTTTCCACTTTCTGGCTCCAGTTTTTGAGTTGAATTCATATGTTTCCCCGGTCCGGCTGCTAGGTTACTaGGATTTTCGTAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: SFHFLAPVFELNSYVSPVRLLGY*DFRSLD
Trigger: ATCTAGACTACGAAAATCCAAGTAACCTAGCAGCCG...GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCAGAAAGTGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466045.1
CDS-3UTR CAA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGTGCAACTCTCAGTGTTaGCTGCTGGAATGTGAATCA +
Preference number: 5 (lower is better)
Translates to: RCNFTLASDWLLFATNQMCNSQC*LLECES
Trigger: TGATTCACATTCCAGCAGCAAACACTGAGAGTTGCA...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTCTAAAGTTAAAAGGATaGACAATCCCAAGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLLKLKG*TIPSVG
Trigger: GCCAACACTTGGGATTGTCAATCCTTTTAACTTTAG...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCTTTATTCCCAGTTCATaGCTCATGCCTACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCFIPSS*LMPTGG
Trigger: TCCACCTGTAGGCATGAGCAATGAACTGGGAATAAA...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AGCAATTGCAACTCTCAGTGTTTGCTGCTGGAATGTGAATCAGAGCCACCACTTAACCAATCAGACCAATaGTGGTCCACTACTTCATTT +
Preference number: 5 (lower is better)
Translates to: SNCNSQCLLLECESEPPLNQSDQ*WSTTSF
Trigger: AAATGAAGTAGTGGACCACAATTGGTCTGATTGGTT...AAGTGGTGGCTCTGATTCACATTCCAGCAGCAAACACTGAGAGTTGCAATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS CCA 90 bp CAGATCCACTGGGAGGGCCAGGAAATAAGAGTTTGGAGTACAAATTaGCTTTTCATCATTTTCTTCAAGGATGTTCACAGTAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: QIHWEGQEIRVWSTN*LFIIFFKDVHSNSD
Trigger: GTCACTGTTACTGTGAACATCCTTGAAGAAAATGATGAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 90 bp TGTGCCAACTTTCAGATCCACTGGGAGGGCCAGGAAATAAGAGTTTaGAGTACAAATTGGCTTTTCATCATTTTCTTCAAGGATGTTCAC +
Preference number: 5 (lower is better)
Translates to: CANFQIHWEGQEIRV*STNWLFIIFFKDVH
Trigger: GTGAACATCCTTGAAGAAAATGATGAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTGAAAGTTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000468477.1
ENST00000478080.5
CDS CCA 90 bp CAGATCCACTGGGAGGGCCAGGAAATAAGAGTTTGGAGTACAAATTaGCTTTTCATCATTTTCTTCAAGGATGTTCACAGTAACCTGGAT +
Preference number: 5 (lower is better)
Translates to: QIHWEGQEIRVWSTN*LFIIFFKDVHSNLD
Trigger: ATCCAGGTTACTGTGAACATCCTTGAAGAAAATGATGAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468477.1
CDS-3UTR CAA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTG +
Preference number: 5 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQYPLGH*DCTSQL
Trigger: CAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATA...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATCTCGGTCTATCCTTaGGGCCACTTGGATTGTACC +
Preference number: 5 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIISVYP*GHLDCT
Trigger: GGTACAATCCAAGTGGCCCAAAGGATAGACCGAGAT...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTATCACCGTATATTTATaGCCGGCTGCTAGGTTACTT +
Preference number: 5 (lower is better)
Translates to: EIWVMLKRGQENKVETRCITVYL*PAARLL
Trigger: AAGTAACCTAGCAGCCGGCAATAAATATACGGTGAT...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTTTGTCAGAGGTTCCTaGTTCTTCCCAGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSFVRGS*FFPVLQ
Trigger: CTGCAAGACTGGGAAGAACAAGGAACCTCTGACAAA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GAAATCTGGGTGATGTTAAAACGAGGGCAGGAAAATAAGGTGGAAACCAGATGTTCGTTTCTCCTTTCTTaGTCAGAGGTTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: EIWVMLKRGQENKVETRCSFLLS*SEVPCS
Trigger: AGAACAAGGAACCTCTGACAAAGAAAGGAGAAACGA...ACATCTGGTTTCCACCTTATTTTCCTGCCCTCGTTTTAACATCACCCAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp CGTTGTAACTTCACCTTAGCCTCTGATTGGTTGCTTTTTGCAACCAATCAGATGTGGACTCTTTCCATTTaGGCATTTGGGTTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: RCNFTLASDWLLFATNQMWTLSI*AFGLVD
Trigger: ATCCACTAACCCAAATGCCAAAATGGAAAGAGTCCA...CATCTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAAGGTGAAGTTACAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCTACCTGTTTAAGGCCTaGAGAGGGAGATGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIYLFKA*RGRWEK
Trigger: TTTCTCCCATCTCCCTCTCAAGGCCTTAAACAGGTA...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS TCA 90 bp GTACCAGGACTTTCATGCAGTTTAGACTGTTTCTCCTTTCCGGTCTaGAGCAGAATGGATAGCATAATGTTTTCAATGTTCATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: VPGLSCSLDCFSFPV*SRMDSIMFSMFIQL
Trigger: CAACTGGATGAACATTGAAAACATTATGCTATCCATTCTGCTTCAGACCGGAAAGGAGAAACAGTCTAAACTGCATGAAAGTCCTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS TCA 90 bp TATCTCTCCCTGGCTTATGAAGTTATTCTTCAACTTACCCTCAGGTaGAGGGAGAAAACTGAACTTATAGTACGAGATACAGCAGTACCA +
Preference number: 5 (lower is better)
Translates to: YLSLAYEVILQLTLR*REKTELIVRDTAVP
Trigger: TGGTACTGCTGTATCTCGTACTATAAGTTCAGTTTTCTCCCTTCACCTGAGGGTAAGTTGAAGAATAACTTCATAAGCCAGGGAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS TCA 90 bp GAGATACAACTGAAACAAGCTGGAGATGAAATTCTCTCCTCAGACTaGAAGATGAAAAAGAATCATCCATACAGCACCTATGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: EIQLKQAGDEILSSD*KMKKNHPYSTYEAM
Trigger: CATGGCCTCATAGGTGCTGTATGGATGATTCTTTTTCATCTTTCAGTCTGAGGAGAGAATTTCATCTCCAGCTTGTTTCAGTTGTATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS TCA 90 bp TTTTCTGGGCTCTCATGGATCTCACAATCTGTTATCACTAACTCCTaGTCCAAACGTATCTCTCCCTGGCTTATGAAGTTATTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: FSGLSWISQSVITNS*SKRISPWLMKLFFN
Trigger: GTTGAAGAATAACTTCATAAGCCAGGGAGAGATACGTTTGGATCAGGAGTTAGTGATAACAGATTGTGAGATCCATGAGAGCCCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS CCA 90 bp TGTCAGCTTGAAATTCTGAATATTTGTGCCAACTTTCAGATCCACTaGGAGGGCCAGGAAATAAGAGTTTGGAGTACAAATTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: CQLEILNICANFQIH*EGQEIRVWSTNWLF
Trigger: GAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTGAAAGTTGGCACAAATATTCAGAATTTCAAGCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000468477.1
ENST00000478080.5
CDS-3UTR CAA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGAACTTCACAGAAAACTaGTGCACTGAAGTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQNFTEN*CTEVPG
Trigger: ACCTGGGACTTCAGTGCACAAGTTTTCTGTGAAGTT...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGCTGAAGGTGAACTTTaGGCATGTGGCAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISAEGEL*ACGRIV
Trigger: GACAATCCTGCCACATGCCAAAAGTTCACCTTCAGC...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGATGGCATGGTGAAGTaGAATCTGTTGTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHDGMVK*NLLFGA
Trigger: GGCACCAAACAACAGATTCAACTTCACCATGCCATC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCCGGCTGCTAGGTTACTaGGATTTTCGTAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIRLLGY*DFRSLD
Trigger: ATCTAGACTACGAAAATCCAAGTAACCTAGCAGCCG...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTTGGAGTTCTCCTGTCTaGGGATTAATCCAAAATACA +
Preference number: 5 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFWSSPV*GLIQNT
Trigger: TGTATTTTGGATTAATCCCAAGACAGGAGAACTCCA...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGAAGAACTTGGACAACTaGCAGTCAAGACCCTCCACC +
Preference number: 5 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQKNLDN*QSRPST
Trigger: GGTGGAGGGTCTTGACTGCAAGTTGTCCAAGTTCTT...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TTGACAATCCCAAGTGTTGGCAAGGATAGAGAGCAATTGCAACTCTCAGTGTTTGCTTTGCTGGGCATTTaGTTCCATTCTTTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LTIPSVGKDREQLQLSVFALLGI*FHSLFK
Trigger: TTTGAACAAAGAATGGAACAAAATGCCCAGCAAAGC...AAACACTGAGAGTTGCAATTGCTCTCTATCCTTGCCAACACTTGGGATTGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp AACCAACCCTTATTAATAAATCACGCTCAATCTAGGCCAGGACAGGCATTTTGCCTGATTGGTTGCTTTTaGCAACCAATCAGATGTTTG +
Preference number: 5 (lower is better)
Translates to: NQPLLINHAQSRPGQAFCLIGCF*QPIRCL
Trigger: CAAACATCTGATTGGTTGCAAAAAGCAACCAATCAG...GCAAAATGCCTGTCCTGGCCTAGATTGAGCGTGATTTATTAATAAGGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCACAAAGTCCAATTCTGTaGTGGAGAAGAGGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISQSPIL*WRRGCH
Trigger: ATGGCACCCTCTTCTCCACAACAGAATTGGACTTTG...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCGGAAATGGTGGGATTTaGTCTCAATTCACCTGCATC +
Preference number: 5 (lower is better)
Translates to: CLSEAQVVLKSDRKCSCIGNGGI*SQFTCI
Trigger: GATGCAGGTGAATTGAGACAAAATCCCACCATTTCC...GATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCTGGGCATTTTGTTCCATTCTTTGTTCAAAACTCCAAGAACTTGGACAACTTGTCATCAAAGCAGAACTaGTTTAGGTCAAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: AGHFVPFFVQNSKNLDNLSSKQN*FRSRSN
Trigger: GTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATGA...CAAGTTGTCCAAGTTCTTGGAGTTTTGAACAAAGAATGGAACAAAATGCCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TGCAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCATCACCGTATATTTATaGCCGGCTGCTAGGTTACTT +
Preference number: 5 (lower is better)
Translates to: CKEETQQFHTPKLTVLLIITVYL*PAARLL
Trigger: AAGTAACCTAGCAGCCGGCAATAAATATACGGTGAT...GATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGTTTGTCAGAGGTTCCTaGTTCTTCCCAGTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQFVRGS*FFPVLQ
Trigger: CTGCAAGACTGGGAAGAACAAGGAACCTCTGACAAA...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGGACTCTTTCCATTTaGGCATTTGGGTTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSWTLSI*AFGLVD
Trigger: ATCCACTAACCCAAATGCCAAAATGGAAAGAGTCCA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS CCA 90 bp CAAATTGGCTTTTCATCATTTTCTTCAAGGATGTTCACAGTAACCTaGATTATCACCGTATATTTATTGCCGGCTGCTAGGTTACTTGGA +
Preference number: 5 (lower is better)
Translates to: QIGFSSFSSRMFTVT*IITVYLLPAARLLG
Trigger: TCCAAGTAACCTAGCAGCCGGCAATAAATATACGGTGATAATCCAGGTTACTGTGAACATCCTTGAAGAAAATGATGAAAAGCCAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468477.1
CDS CCA 90 bp ATGAAAAAGAATCATCCATACAGCACCTATGAGGCCATGAGGAAATaGGAATTCTCATACACCCTGGCAAAGTTTGGCAATTTCAAAATT +
Preference number: 5 (lower is better)
Translates to: MKKNHPYSTYEAMRK*EFSYTLAKFGNFKI
Trigger: AATTTTGAAATTGCCAAACTTTGCCAGGGTGTATGAGAATTCCCATTTCCTCATGGCCTCATAGGTGCTGTATGGATGATTCTTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACTTTGGGCCACTTGGATaGTACCAGTCAACTGATTTA +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHFGPLG*YQSTDL
Trigger: TAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAA...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGGGAAATGGTGGGATTTaGTCTCAATTCACCTGCATC +
Preference number: 5 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQGNGGI*SQFTCI
Trigger: GATGCAGGTGAATTGAGACAAAATCCCACCATTTCC...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp CAGTCTTGCTTATCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTCATCAAAGCAGAACTaGTTTAGGTCAAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: QSCLSEAQVVLKSDRKCSSSKQN*FRSRSN
Trigger: GTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATGA...GGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGATAAGCAAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp CCTGTATCATTTCAGAACACGCAACTATGTGATCAAACCCCTTTCTATTTGTTTTCGTTTCTCCTTTCTTaGTCAGAGGTTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: PVSFQNTQLCDQTPFYLFSFLLS*SEVPCS
Trigger: AGAACAAGGAACCTCTGACAAAGAAAGGAGAAACGA...AAACAAATAGAAAGGGGTTTGATCACATAGTTGCGTGTTCTGAAATGATACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp GCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAGAACACGCTCCAGTTTTTGAGTaGAATTCATATGTTTCCCCG +
Preference number: 5 (lower is better)
Translates to: AQVVLKSDRKCSCIISEHAPVFE*NSYVSP
Trigger: CGGGGAAACATATGAATTCAACTCAAAAACTGGAGC...GTGTTCTGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS-3UTR CAA 90 bp CAAAGAAGAAACACAACAATTCCACACCCCAAAGTTAACAGTCTTGCTTATCAGACTGTGGAGTGTACTTaGGTTTTCAATAAATCCCTG +
Preference number: 5 (lower is better)
Translates to: QRRNTTIPHPKVNSLAYQTVECT*VFNKSL
Trigger: CAGGGATTTATTGAAAACCAAAGTACACTCCACAGT...CTGATAAGCAAGACTGTTAACTTTGGGGTGTGGAATTGTTGTGTTTCTTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCACTCATTTTACTTGCATaGAAGCTGAGAGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISLILLA*KLRASK
Trigger: CTTGGAAGCTCTCAGCTTCAATGCAAGTAAAATGAG...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp GCACACATTGGAAAGTTACATTTCCTATTCCATCATAATACCATTTATTCCCAGTTAGCCTCTGATTGGTaGCTTTTTGCAACCAATCAG +
Preference number: 5 (lower is better)
Translates to: AHIGKLHFLFHHNTIYSQLASDW*LFATNQ
Trigger: CTGATTGGTTGCAAAAAGCAACCAATCAGAGGCTAA...CTGGGAATAAATGGTATTATGATGGAATAGGAAATGTAACTTTCCAATGTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317716.14
CDS-3UTR CAA 90 bp TCAGAAGCACAGGTAGTTCTGAAATCTGATAGAAAATGTTCCTGTATCATTTCAACTCATTTTCTGGGCTaGTTAGGATATAAACGTAGA +
Preference number: 5 (lower is better)
Translates to: SEAQVVLKSDRKCSCIISTHFLG*LGYKRR
Trigger: TCTACGTTTATATCCTAACAAGCCCAGAAAATGAGT...TGAAATGATACAGGAACATTTTCTATCAGATTTCAGAACTACCTGTGCTTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000466045.1
CDS CCA 72 bp AGTACAGGAGGCTGCTCTGGGGGAGGTCTTTATCAGTaGCTCGCACCTGTCCCACTCGGGTTCTGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: STGGCSGGGLYQ*LAPVPLGFWRA
Trigger: GGCCCGCCAGAACCCGAGTGGGACAGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS GCA 72 bp GGCTGGCCCCTCCAGTGGAGATGGAGTACAGGAGGCTaGTCTGGGGGAGGTCTTTATCAGTGGCTCGCACCT +
Preference number: 6 (lower is better)
Translates to: GWPLQWRWSTGG*SGGGLYQWLAP
Trigger: AGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCATCTCCACTGGAGGGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 72 bp GCCCCTCCAGTGGAGATGGAGTACAGGAGGCTGCTCTaGGGGAGGTCTTTATCAGTGGCTCGCACCTGTCCC +
Preference number: 6 (lower is better)
Translates to: APPVEMEYRRLL*GRSLSVARTCP
Trigger: GGGACAGGTGCGAGCCACTGATAAAGACCTCCCCCAGAGCAGCCTCCTGTACTCCATCTCCACTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 72 bp GTTGGGCGACAGGGACGCGGGGAGAGAGCGACAAGCTaGAAGCAAGGGCTGCCTGCAAAACTTTCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VGRQGRGERATS*KQGLPAKLSVL
Trigger: GAGGACCGAAAGTTTTGCAGGCAGCCCTTGCTTCCAGCTTGTCGCTCTCTCCCCGCGTCCCTGTCGCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470188.5
ENST00000474330.1
ENST00000487084.1
CDS CCA 72 bp AGGTTGAGTCCGCCCACACTGCAAACCAAGCACCTCTaGAGCAGAGCAATCTCCAGCCCTGGGCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: RLSPPTLQTKHL*SRAISSPGQPP
Trigger: GGGAGGCTGCCCAGGGCTGGAGATTGCTCTGCTCCAGAGGTGCTTGGTTTGCAGTGTGGGCGGACTCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS GCA 72 bp GACGCGGGGAGAGAGCGACAAGCTGGAAGCAAGGGCTaGCTGCAAAACTTTCGGTCCTCCAGCGGCAACTCT +
Preference number: 6 (lower is better)
Translates to: DAGRERQAGSKG*LQNFRSSSGNS
Trigger: AGAGTTGCCGCTGGAGGACCGAAAGTTTTGCAGGCAGCCCTTGCTTCCAGCTTGTCGCTCTCTCCCCGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470188.5
ENST00000474330.1
ENST00000487084.1
CDS CAA 90 bp CATGGGGCTCCAGCTCAAGGCGCTTTTGTGTGGCTTTCGCTCAGGTaGAGTCCGCCCACACTGCAAACCAAGCACCTCTGGAGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: HGAPAQGAFVWLSLR*SPPTLQTKHLWSRA
Trigger: TGCTCTGCTCCAGAGGTGCTTGGTTTGCAGTGTGGGCGGACTCAACCTGAGCGAAAGCCACACAAAAGCGCCTTGAGCTGGAGCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS CCA 72 bp CGAGGGACTTCGTCGTTGAGGTTCACGATGTTCACCTaGAGCTCTGTGGAGGCTTTGAGGCCTCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: RGTSSLRFTMFT*SSVEALRPPLS
Trigger: GGACAGTGGAGGCCTCAAAGCCTCCACAGAGCTCCAGGTGAACATCGTGAACCTCAACGACGAAGTCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 72 bp TCCCAGTCTTGCAGGGGCAGTGTCTGTGGATGGCTTTaGCCAATAGGACGACCAGGTACACGAGGAGACCCA +
Preference number: 6 (lower is better)
Translates to: SQSCRGSVCGWL*PIGRPGTRGDP
Trigger: TGGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CAA 72 bp TTCCCAGTCTTGCAGGGGCAGTGTCTGTGGATGGCTTaGGCCAATAGGACGACCAGGTACACGAGGAGACCC +
Preference number: 6 (lower is better)
Translates to: FPVLQGQCLWMA*ANRTTRYTRRP
Trigger: GGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CAA 72 bp CCAGCTCAAGGCGCTTTTGTGTGGCTTTCGCTCAGGTaGAGTCCGCCCACACTGCAAACCAAGCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: PAQGAFVWLSLR*SPPTLQTKHLW
Trigger: CCAGAGGTGCTTGGTTTGCAGTGTGGGCGGACTCAACCTGAGCGAAAGCCACACAAAAGCGCCTTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS TCA 72 bp CAGCTCAAGGCGCTTTTGTGTGGCTTTCGCTCAGGTTaGGTCCGCCCACACTGCAAACCAAGCACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: QLKALLCGFRSG*VRPHCKPSTSG
Trigger: TCCAGAGGTGCTTGGTTTGCAGTGTGGGCGGACTCAACCTGAGCGAAAGCCACACAAAAGCGCCTTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS CAA 72 bp ACTCGTGTCGGGCTGGTAAAGCGAGGGACTTCGTCGTaGAGGTTCACGATGTTCACCTGGAGCTCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: TRVGLVKRGTSS*RFTMFTWSSVE
Trigger: CTCCACAGAGCTCCAGGTGAACATCGTGAACCTCAACGACGAAGTCCCTCGCTTTACCAGCCCGACACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CAA 90 bp TCCTTGTTCTTCCCAGTCTTGCAGGGGCAGTGTCTGTGGATGGCTTaGGCCAATAGGACGACCAGGTACACGAGGAGACCCAGAAGCAAT +
Preference number: 6 (lower is better)
Translates to: SLFFPVLQGQCLWMA*ANRTTRYTRRPRSN
Trigger: ATTGCTTCTGGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CCA 72 bp GACCCTGGGCCTGGGGGTCGTGGTGATGATAGTGGTTaGGTGGGGAATGACTTTAATACTCAGTGTCACTGT +
Preference number: 6 (lower is better)
Translates to: DPGPGGRGDDSG*VGNDFNTQCHC
Trigger: ACAGTGACACTGAGTATTAAAGTCATTCCCCACCCAACCACTATCATCACCACGACCCCCAGGCCCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 72 bp GTGTCGGGCTTCTGCCAAGTTGCCTTGAAACTGAGGTaGCTCGTTCACATCTGTTACCTGGACAGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: VSGFCQVALKLR*LVHICYLDSQD
Trigger: GTCCTGACTGTCCAGGTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGCCCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS TCA 72 bp GGCTGGGAAAACCTTCATCATCAGGATCCTCCGCTGTaGTATTGGCCACGATGGTTCCTGGACTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: GWENLHHQDPPL*YWPRWFLDSVP
Trigger: AGGAACTGAGTCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS CAA 72 bp GGAAAACCTTCATCATCAGGATCCTCCGCTGTGATATaGGCCACGATGGTTCCTGGACTCAGTTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GKPSSSGSSAVI*ATMVPGLSSSR
Trigger: CCTGGAGGAACTGAGTCCAGGAACCATCGTGGCCAATATCACAGCGGAGGATCCTGATGATGAAGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS CAA 72 bp CTGTGTACACTCGTGTCGGGCTTCTGCCAAGTTGCCTaGAAACTGAGGTGGCTCGTTCACATCTGTTACCTG +
Preference number: 6 (lower is better)
Translates to: LCTLVSGFCQVA*KLRWLVHICYL
Trigger: CAGGTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGCCCGACACGAGTGTACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488386.5
ENST00000496633.1
CDS CAA 90 bp TTAGCTTGGTTTTGTTTGTGTGCTTCTCCATTCATTCCAGCTGTGTaGCTGCCAGAACCCCTGACCTACCCTCAGCCCAGTCCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: LAWFCLCASPFIPAV*LPEPLTYPQPSPQS
Trigger: AGACTGAGGACTGGGCTGAGGGTAGGTCAGGGGTTCTGGCAGCAACACAGCTGGAATGAATGGAGAAGCACACAAACAAAACCAAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS CAA 72 bp CACCTGCATCTCGGTCTATCCTTTGGGCCACTTGGATaGTACCAGTCAACTGAGGGGAATGTTTCGGCTTGT +
Preference number: 6 (lower is better)
Translates to: HLHLGLSFGPLG*YQSTEGNVSAC
Trigger: ACAAGCCGAAACATTCCCCTCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000470188.5
CDS CAA 90 bp GAAAACTTGTGCACTGAAGTCCCAGGTGGAGAATTCTCTGCCACATaGCCTGTAGCAGGTAAGAGGATTAGGTGTAGTGCTTCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: ENLCTEVPGGEFSAT*PVAGKRIRCSASPP
Trigger: AGGGGGAGAAGCACTACACCTAATCCTCTTACCTGCTACAGGCAATGTGGCAGAGAATTCTCCACCTGGGACTTCAGTGCACAAGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000470188.5
ENST00000496633.1
CDS CAA 90 bp TCTCTCTCTGCAGTCTTCGTTTCTCCTTTCTTTGTCAGAGGTTCCTaGTTCTTCCCAGTCTTGCAGGGGCAGTGTCTGTGGATGGCTTTG +
Preference number: 6 (lower is better)
Translates to: SLSAVFVSPFFVRGS*FFPVLQGQCLWMAL
Trigger: CAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGGAACCTCTGACAAAGAAAGGAGAAACGAAGACTGCAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS TCA 72 bp AGACTCTCTTCAAGGTCCTGTGTAGTAACCTCCACTTaGCAGACTCTGCTGCCTGTTTTCCCAAGGAATCGG +
Preference number: 6 (lower is better)
Translates to: RLSSRSCVVTST*QTLLPVFPRNR
Trigger: CCGATTCCTTGGGAAAACAGGCAGCAGAGTCTGTCAAGTGGAGGTTACTACACAGGACCTTGAAGAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS GCA 72 bp CTTTCTTTGTCAGAGGTTCCTTGTTCTTCCCAGTCTTaGAGGGGCAGTGTCTGTGGATGGCTTTGGCCAATA +
Preference number: 6 (lower is better)
Translates to: LSLSEVPCSSQS*RGSVCGWLWPI
Trigger: TATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGGGAAGAACAAGGAACCTCTGACAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS GCA 72 bp GTTCATCTGGATAGTTTCCACCACGACGTCTCTCTCTaGAGTCTTCGTTTCTGCAGAGAACAGAACAGGCAG +
Preference number: 6 (lower is better)
Translates to: VHLDSFHHDVSL*SLRFCREQNRQ
Trigger: CTGCCTGTTCTGTTCTCTGCAGAAACGAAGACTGCAGAGAGAGACGTCGTGGTGGAAACTATCCAGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468143.1
CDS GCA 72 bp AGTTTCACAACTTCCTTCTTCCAGAGACCACCAGACTaGATCTCTGTGAGGGTGAGGATGGGTCTCACTCAT +
Preference number: 6 (lower is better)
Translates to: SFTTSFFQRPPD*ISVRVRMGLTH
Trigger: ATGAGTGAGACCCATCCTCACCCTCACAGAGATGCAGTCTGGTGGTCTCTGGAAGAAGGAAGTTGTGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS CCA 72 bp CAGTCAACTGAGGGGAATGTTTCGGCTTGTGTCTTCTaGATCGAAGGCCTCAACCTGGTAAATGAATCCAGG +
Preference number: 6 (lower is better)
Translates to: QSTEGNVSACVF*IEGLNLVNESR
Trigger: CCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACACAAGCCGAAACATTCCCCTCAGTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000470188.5
CDS CCA 72 bp GGTGACAACCTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTC +
Preference number: 6 (lower is better)
Translates to: GDNLRFRTTSTH*FQLLEQQLQNL
Trigger: GAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGGTTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488386.5
CDS CCA 72 bp CACAGCTCTCTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTC +
Preference number: 6 (lower is better)
Translates to: HSSLRFRTTSTH*FQLLEQQLQNL
Trigger: GAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGAGAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487084.1
CDS CAA 72 bp TGGCTCGTTCACATCTGTTACCTGGACAGTCAGGACTaGCAGGTCTGTGACACCAACCTCATCCTTCACATA +
Preference number: 6 (lower is better)
Translates to: WLVHICYLDSQD*QVCDTNLILHI
Trigger: TATGTGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAACGAGCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS CAA 72 bp CAATTCACCTGCATCTCGGTCTATCCTTTGGGCCACTaGGATTGTACCAGTCAACTGAGGGGAATGTTTCGG +
Preference number: 6 (lower is better)
Translates to: QFTCISVYPLGH*DCTSQLRGMFR
Trigger: CCGAAACATTCCCCTCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000470188.5
CDS CAA 72 bp CAGACTCTCTTCAAGGTCCTGTGTAGTAACCTCCACTaGACAGACTCTGCTGCCTGTTTTCCCAAGGAATCG +
Preference number: 6 (lower is better)
Translates to: QTLFKVLCSNLH*TDSAACFPKES
Trigger: CGATTCCTTGGGAAAACAGGCAGCAGAGTCTGTCAAGTGGAGGTTACTACACAGGACCTTGAAGAGAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS GCA 72 bp TATGGAGCCCAAAGTGATGACAAACGGCACGTACCATaGAGATGGAGAGTAAACGTTTTTCCTCAGGACCTG +
Preference number: 6 (lower is better)
Translates to: YGAQSDDKRHVP*RWRVNVFPQDL
Trigger: CAGGTCCTGAGGAAAAACGTTTACTCTCCATCTGCATGGTACGTGCCGTTTGTCATCACTTTGGGCTCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CCA 72 bp GAGTTCTCCTGTCTTGGGATTAATCCAAAATACATTTaGATACTGGAGGCTGGCCCCTCCAGTGGAGATGGA +
Preference number: 6 (lower is better)
Translates to: EFSCLGINPKYI*ILEAGPSSGDG
Trigger: TCCATCTCCACTGGAGGGGCCAGCCTCCAGTATCCAAATGTATTTTGGATTAATCCCAAGACAGGAGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CCA 72 bp GCCCAAAGTGATGACAAACGGCACGTACCATGCAGATaGAGAGTAAACGTTTTTCCTCAGGACCTGATAGGT +
Preference number: 6 (lower is better)
Translates to: AQSDDKRHVPCR*RVNVFPQDLIG
Trigger: ACCTATCAGGTCCTGAGGAAAAACGTTTACTCTCCATCTGCATGGTACGTGCCGTTTGTCATCACTTTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CAA 90 bp AAACTGAGGTGGCTCGTTCACATCTGTTACCTGGACAGTCAGGACTaGCAGGTCTGTGACACCAACCTCATCCTTCACATAAATCTGCAA +
Preference number: 6 (lower is better)
Translates to: KLRWLVHICYLDSQD*QVCDTNLILHINLQ
Trigger: TTGCAGATTTATGTGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAGGTAACAGATGTGAACGAGCCACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS CAA 90 bp AATGGTGGGATTTTGTCTCAATTCACCTGCATCTCGGTCTATCCTTaGGGCCACTTGGATTGTACCAGTCAACTGAGGGGAATGTTTCGG +
Preference number: 6 (lower is better)
Translates to: NGGILSQFTCISVYP*GHLDCTSQLRGMFR
Trigger: CCGAAACATTCCCCTCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTGAATTGAGACAAAATCCCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461766.1
ENST00000470188.5
CDS CAA 90 bp ATGTCCAGCCCAACTTTCAAAGTGTGCATACCTGAAGGTGAACTTTaGGCATGTGGCAGGATTGTCGTTGACGTCTTCCACAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: MSSPTFKVCIPEGEL*ACGRIVVDVFHNEG
Trigger: ACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGAAAGTTGGGCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS GCA 72 bp GTTCATCTGGATAGTTTCCACCACGACGTCTCTCTCTaGAGTCTTCGTTTCTCCTTTCTTTGTCAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: VHLDSFHHDVSL*SLRFSFLCQRF
Trigger: GAACCTCTGACAAAGAAAGGAGAAACGAAGACTGCAGAGAGAGACGTCGTGGTGGAAACTATCCAGATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CCA 72 bp GAAATAACTGAGGGGAATGTTTCGGCTTGTGTCTTCTaGATCGAAGGCCTCAACCTGGTAAATGAATCCAGG +
Preference number: 6 (lower is better)
Translates to: EITEGNVSACVF*IEGLNLVNESR
Trigger: CCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACACAAGCCGAAACATTCCCCTCAGTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CAA 72 bp GCATACCTGAAGGTGAACTTTTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACAATGAAGGTTATCTGG +
Preference number: 6 (lower is better)
Translates to: AYLKVNFWHVAG*SLTSSTMKVIW
Trigger: CCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS CAA 72 bp CCAACTTTCAAAGTGTGCATACCTGAAGGTGAACTTTaGGCATGTGGCAGGATTGTCGTTGACGTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: PTFKVCIPEGEL*ACGRIVVDVFH
Trigger: GTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGAAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS CAA 90 bp GTTGTTTCACAGTCCACTTTAGTTACCAGCTGGAGTTCTCCTGTCTaGGGATTAATCCAAAATACATTTGGATACTGGAGGCTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: VVSQSTLVTSWSSPV*GLIQNTFGYWRLAP
Trigger: AGGGGCCAGCCTCCAGTATCCAAATGTATTTTGGATTAATCCCAAGACAGGAGAACTCCAGCTGGTAACTAAAGTGGACTGTGAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CAA 90 bp TCAAAGTGTGCATACCTGAAGGTGAACTTTTGGCATGTGGCAGGATaGTCGTTGACGTCTTCCACAATGAAGGTTATCTGGATGCGATTC +
Preference number: 6 (lower is better)
Translates to: SKCAYLKVNFWHVAG*SLTSSTMKVIWMRF
Trigger: GAATCGCATCCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS CAA 90 bp AATAAGTCAGGGCCCTGTCCTAGTATAATTCCGAGTCACAACAGTTaGAGCCATGAAACAGAAAAACCCATGACTCCTTCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: NKSGPCPSIIPSHNS*SHETEKPMTPSAAA
Trigger: AGCAGCAGCAGAAGGAGTCATGGGTTTTTCTGTTTCATGGCTCAAACTGTTGTGACTCGGAATTATACTAGGACAGGGCCCTGACTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS TCA 72 bp CATCTGTTACCTGGACAGTCAGGACTTGCAGGTCTGTaGCACCAACCTCATCCTTCACATAAATCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: HLLPGQSGLAGL*HQPHPSHKSAN
Trigger: ATTTGCAGATTTATGTGAAGGATGAGGTTGGTGTCACAGACCTGCAAGTCCTGACTGTCCAGGTAACAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
ENST00000488386.5
ENST00000496633.1
CDS TCA 72 bp AGGTGTAGTGCTTCTCCCCCTGTTATCACTAACTCCTaGTCCAAACGTATCTCTCCCTGGCTTATGAAGTTA +
Preference number: 6 (lower is better)
Translates to: RCSASPPVITNS*SKRISPWLMKL
Trigger: TAACTTCATAAGCCAGGGAGAGATACGTTTGGATCAGGAGTTAGTGATAACAGGGGGAGAAGCACTACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470188.5
CDS GCA 72 bp CAAAGAGATAGAATGTCCAGCCCAACTTTCAAAGTGTaGATACCTGAAGGTGAACTTTTGGCATGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: QRDRMSSPTFKV*IPEGELLACGR
Trigger: CCTGCCACATGCCAAAAGTTCACCTTCAGGTATGCACACTTTGAAAGTTGGGCTGGACATTCTATCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466351.1
ENST00000471910.1
CDS CCA 72 bp AAAGAAGAACTGCGTTTCAGAACGACATCTACCCACTaGTTTCAGCTCCTAGAGCAACAACTGCAGAATCTC +
Preference number: 6 (lower is better)
Translates to: KEELRFRTTSTH*FQLLEQQLQNL
Trigger: GAGATTCTGCAGTTGTTGCTCTAGGAGCTGAAACCAGTGGGTAGATGTCGTTCTGAAACGCAGTTCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470188.5
CDS CCA 72 bp TCTATGAAAGTGAAGCAATGCCTTCCAGAAATCAGGTaGATGCTCCATATGCCAAGCTCTGTGCTAAGCACT +
Preference number: 6 (lower is better)
Translates to: SMKVKQCLPEIR*MLHMPSSVLST
Trigger: AGTGCTTAGCACAGAGCTTGGCATATGGAGCATCCACCTGATTTCTGGAAGGCATTGCTTCACTTTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS CAA 72 bp GGGCCCTGTCCTAGTATAATTCCGAGTCACAACAGTTaGAGCCATGAAACAGAAAAACCCATGACTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GPCPSIIPSHNS*SHETEKPMTPS
Trigger: AGAAGGAGTCATGGGTTTTTCTGTTTCATGGCTCAAACTGTTGTGACTCGGAATTATACTAGGACAGGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS CAA 90 bp GCACCTGGATTATCACCGTATATTTATTGCCGGCTGCTAGGTTACTaGGATTTTCGTAGTCTAGATCACCAATCAGCACAATCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: APGLSPYIYCRLLGY*DFRSLDHQSAQSSQ
Trigger: CTGGGAAGATTGTGCTGATTGGTGATCTAGACTACGAAAATCCAAGTAACCTAGCAGCCGGCAATAAATATACGGTGATAATCCAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS TCA 72 bp TTGTGTCTTCTGGATCGAAGGCCTCAACCTGGTAAATaGATCCAGGGTTTGCTCTTTCTACTATGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: LCLLDRRPQPGK*IQGLLFLLCRG
Trigger: ACCTCTACATAGTAGAAAGAGCAAACCCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000461766.1
ENST00000470188.5
ENST00000478080.5
CDS TCA 72 bp CTAACTCCTGATCCAAACGTATCTCTCCCTGGCTTATaGAGTTATTCTTCAACTTACCCTCAGGTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: LTPDPNVSLPGL*SYSSTYPQVKG
Trigger: TCCCTTCACCTGAGGGTAAGTTGAAGAATAACTTCATAAGCCAGGGAGAGATACGTTTGGATCAGGAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS GCA 72 bp CCACATCCTGCACCTGGATTATCACCGTATATTTATTaGCGGCTGCTAGGTTACTTGGATTTTCGTAGTCTA +
Preference number: 6 (lower is better)
Translates to: PHPAPGLSPYIY*RLLGYLDFRSL
Trigger: TAGACTACGAAAATCCAAGTAACCTAGCAGCCGGCAATAAATATACGGTGATAATCCAGGTGCAGGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS CCA 72 bp AATCATCCATACAGCACCTATGAGGCCATGAGGAAATaGGAATTCTCATACACCCTGGCAAAGTTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: NHPYSTYEAMRK*EFSYTLAKFGN
Trigger: ATTGCCAAACTTTGCCAGGGTGTATGAGAATTCCCATTTCCTCATGGCCTCATAGGTGCTGTATGGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474330.1
CDS CCA 72 bp ATGGGGGTTGTTTCACAGTCCACTTTAGTTACCAGCTaGAGTTCTCCTGTCTTGGGATTAATCCAAAATACA +
Preference number: 6 (lower is better)
Translates to: MGVVSQSTLVTS*SSPVLGLIQNT
Trigger: TGTATTTTGGATTAATCCCAAGACAGGAGAACTCCAGCTGGTAACTAAAGTGGACTGTGAAACAACCCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317716.14
ENST00000478080.5
CDS CAA 90 bp AGTCTTCGTTTCTGCAGAGAACAGAACAGGCAGAAGTTAAGCTTCTaGGGTGGTAAATTGACCTTAAAATTCCACCTCCACAACGGTATT +
Preference number: 6 (lower is better)
Translates to: SLRFCREQNRQKLSF*GGKLTLKFHLHNGI
Trigger: AATACCGTTGTGGAGGTGGAATTTTAAGGTCAATTTACCACCCAAGAAGCTTAACTTCTGCCTGTTCTGTTCTCTGCAGAAACGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468143.1
CDS TCA 72 bp TATTCTTCAACTTACCCTCAGGTGAAGGGAGAAAACTaGACTTATAGTACGAGATACAGCAGTACCAGGACT +
Preference number: 6 (lower is better)
Translates to: YSSTYPQVKGEN*TYSTRYSSTRT
Trigger: AGTCCTGGTACTGCTGTATCTCGTACTATAAGTTCAGTTTTCTCCCTTCACCTGAGGGTAAGTTGAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS TCA 72 bp CTCTCATGGATCTCACAATCTGTTATCACTAACTCCTaGTCCAAACGTATCTCTCCCTGGCTTATGAAGTTA +
Preference number: 6 (lower is better)
Translates to: LSWISQSVITNS*SKRISPWLMKL
Trigger: TAACTTCATAAGCCAGGGAGAGATACGTTTGGATCAGGAGTTAGTGATAACAGATTGTGAGATCCATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472116.1
CDS CAA 90 bp TTGTGCCAACTTTCAGATCCACTGGGAGGGCCAGGAAATAAGAGTTaGGAGTACAAATTGGCTTTTCATCATTTTCTTCAAGGATGTTCA +
Preference number: 6 (lower is better)
Translates to: LCQLSDPLGGPGNKS*EYKLAFHHFLQGCS
Trigger: TGAACATCCTTGAAGAAAATGATGAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTGAAAGTTGGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317716.14
ENST00000468477.1
ENST00000478080.5
CDS CAA 72 bp TTATCACCGTATATTTATTGCCGGCTGCTAGGTTACTaGGATTTTCGTAGTCTAGATCACCAATCAGCACAA +
Preference number: 6 (lower is better)
Translates to: LSPYIYCRLLGY*DFRSLDHQSAQ
Trigger: TTGTGCTGATTGGTGATCTAGACTACGAAAATCCAAGTAACCTAGCAGCCGGCAATAAATATACGGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5
CDS TCA 72 bp CTTTCATGCAGTTTAGACTGTTTCTCCTTTCCGGTCTaGAGCAGAATGGATAGCATAATGTTTTCAATGTTC +
Preference number: 6 (lower is better)
Translates to: LSCSLDCFSFPV*SRMDSIMFSMF
Trigger: GAACATTGAAAACATTATGCTATCCATTCTGCTTCAGACCGGAAAGGAGAAACAGTCTAAACTGCATGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS TCA 72 bp CTGGCTTATGAAGTTATTCTTCAACTTACCCTCAGGTaGAGGGAGAAAACTGAACTTATAGTACGAGATACA +
Preference number: 6 (lower is better)
Translates to: LAYEVILQLTLR*REKTELIVRDT
Trigger: TGTATCTCGTACTATAAGTTCAGTTTTCTCCCTTCACCTGAGGGTAAGTTGAAGAATAACTTCATAAGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470188.5
ENST00000472116.1
CDS TCA 72 bp CTGACACATCAAATACATAGGATGGCCTATCAAAAATaGGAGGAAACTCATTTTCTGGGCTTGTTAGGATAT +
Preference number: 6 (lower is better)
Translates to: LTHQIHRMAYQK*EETHFLGLLGY
Trigger: ATATCCTAACAAGCCCAGAAAATGAGTTTCCTCTCATTTTTGATAGGCCATCCTATGTATTTGATGTGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317716.14
ENST00000466045.1
ENST00000470188.5
ENST00000478080.5