Pregenerated sensors for CDH9 (Homo sapiens)
Ensembl gene IDs: ENSG00000113100Ensembl transcript IDs: ENST00000231021.9, ENST00000505020.1, ENST00000505045.1, ENST00000511822.1, ENST00000513289.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCGTGCTCAGGCCGGCTaGAAGGATCAGGGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTRAQAG*KDQGFC Trigger: GCAGAAGCCCTGATCCTTTCAGCCGGCCTGAGCACG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTAGCCCTACTCCGCACTaGCAGTTCCGTTGTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTSPTPH*QFRCCF Trigger: GAAGCAACAACGGAACTGTCAGTGCGGAGTAGGGCT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCAGCCACGCTTGGTaGGACGTAGCATTTTACCGT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTSSHAW*DVAFYR Trigger: ACGGTAAAATGCTACGTCGCACCAAGCGTGGCTGGA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGATTCCGGTTCCACCTaGCGCCCAGTTTTTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTDSGST*RPVFLS Trigger: AGACAGAAAAACTGGGCGGCAGGTGGAACCGGAATC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCAACGAGAGCTCCCGTaGTCAGGCCGGCTGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIQRELP*SGRLKG Trigger: TCCTTTCAGCCGGCCTGAGCACGGGAGCTCTCGTTG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTAATCGTGGATCAGGGTaGGTGTTACTTGCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTNRGSG*VLLAST Trigger: AGTGGATGCAAGTAACACTCACCCTGATCCACGATT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCACAGCTGTATCTTTaGAAGGTCCCAGGTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPQLYL*KVPGVR Trigger: TCTTACACCTGGGACCTTTCAAAGATACAGCTGTGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGACATCGAACATGTCTaGACCATCTCCTTCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTDIEHV*TISFSN Trigger: ATTGCTGAAGGAGATGGTGCAGACATGTTCGATGTC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGGCATCTGGATCGTATaGTGTAACCTGTCCAATGAT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTGIWIV*CNLSND Trigger: ATCATTGGACAGGTTACAGCATACGATCCAGATGCC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGTAACAGTGATGTTATaGCAAGGAGATGATTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTVTVML*QGDDSR Trigger: CCGGGAATCATCTCCTTGGCATAACATCACTGTTAC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTAGGTGCTCATTTTGTTaGGACTGTAGCCATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTRCSFC*DCSHLS Trigger: GGAAAGATGGCTACAGTCGCAACAAAATGAGCACCT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCTCCCAGGAAGAGAATaGAGGCCACTCAATCTAATA | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTLPGRE*RPLNLI Trigger: TATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCACGTCAGGGTCATTaGCTTTTATCCTTCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPRQGH*LLSFQD Trigger: ATCTTGGAAGGATAAAAGCCAATGACCCTGACGTGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATTGTTCCTGGCATCTaGATCGTATGCTGTAACCTG | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTIVPGI*IVCCNL Trigger: CAGGTTACAGCATACGATCCAGATGCCAGGAACAAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATATGGAGGTGCACTTaGGTCTGCGTCGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTIWRCT*VCVVFF Trigger: AAAGAAAACGACGCAGACCCAAGTGCACCTCCATAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCGGACATCGTCTTTTaGAATTATCAGAGGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPDIVF*NYQRFL Trigger: AAGGAACCTCTGATAATTTCAAAAGACGATGTCCGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATAGTTGGCGTCATCTaGATCTGTTGCAGTTACTTG | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTIVGVI*ICCSYL Trigger: CAAGTAACTGCAACAGATGCAGATGACGCCAACTAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGCTCTCTATTTTCTCTaGTCATGTCTGGTAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTALYFL*SCLVMQ Trigger: CTGCATTACCAGACATGAGCAGAGAAAATAGAGAGC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCGGTCCATATCAGTATaGCGATCAACAGAGTACTTT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTRSISV*RSTEYF Trigger: AAAGTACTCTGTTGATCGGCATACTGATATGGACCG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTAGAACTGAGCGAATCTaGTATGGAATCATTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTRTERI*YGIIPF Trigger: GAAGGGAATGATTCCATAGCAGATTCGCTCAGTTCT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTGCCAGCGAATCATATaGAGGTGCACTTGGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNICQRII*RCTWVC Trigger: GCAGACCCAAGTGCACCTCCATATGATTCGCTGGCA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTTATCTTGGTCAGTGTaGAGCTTGCCTACATATTGT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTLSWSV*SLPTYC Trigger: ACAATATGTAGGCAAGCTTCACACTGACCAAGATAA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGTTATGCCAAGGAGATaGTTCCCGGTCAAGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIVMPRR*FPVKGF Trigger: AAAGCCCTTGACCGGGAATCATCTCCTTGGCATAAC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATGCAGTTTTTATTATaGCTGATTCTGGGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTMQFLL*LILGPL Trigger: CAGTGGACCCAGAATCAGGCATAATAAAAACTGCAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCGAATCATATGGAGGTaGACTTGGGTCTGCGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIRIIWR*TWVCVV Trigger: AACGACGCAGACCCAAGTGCACCTCCATATGATTCG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTACATCCAGCCACGCTTaGTGCGACGTAGCATTTTAC | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNITSSHA*CDVAFY Trigger: GTAAAATGCTACGTCGCACCAAGCGTGGCTGGATGT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATGAAGACAGGGATGTaGCTACTTTGTTTTGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTMKTGM*LLCFGL Trigger: TAACCCAAAACAAAGTAGCCACATCCCTGTCTTCAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCAGGAGAATTAAATTaGTACGTACTCTGGGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTSGELN*YVLWGN Trigger: ATTTCCCCAGAGTACGTATCAATTTAATTCTCCTGA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGCTATACTCCATTTCTaGATTTTCCCCCACGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIAILHF*IFPHVR Trigger: CCTGACGTGGGGGAAAATGCAGAAATGGAGTATAGC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATGTTTCATAATACATaGCAAATTCCGGAGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTMFHNT*QIPEHG Trigger: ACCATGCTCCGGAATTTGCCATGTATTATGAAACAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTATGACACTGACAGTCTaGATCAACTGCCCAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIMTLTV*INCPGF Trigger: AAAACCTGGGCAGTTGATTCAGACTGTCAGTGTCAT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGGTCAGTGTGAAGCTTaGCTACATATTGTGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIGQCEA*LHIVCQ Trigger: CTGACACACAATATGTAGGCAAGCTTCACACTGACC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCGAGTCATGATTCCTaGTGTATTATCTTTATTATC | + |
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Preference number: 4 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPSHDS*CIIFII Trigger: GATAATAAAGATAATACAGCAGGAATCATGACTCGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTCATAGGCATACGTTaGCAGCGAATCATATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFIGIR*QRIIWR Trigger: CCTCCATATGATTCGCTGGCAACGTATGCCTATGAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTTATCCTTCCAAGATaGGTTCCAAGAGGTACAGAC | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFILPR*VPRGTD Trigger: GTCTGTACCTCTTGGAACTCATCTTGGAAGGATAAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGAGATTCCAAAGAACTaGGCGAATCTGCTATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIEIPKN*ANLLWN Trigger: ATTCCATAGCAGATTCGCTCAGTTCTTTGGAATCTC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTCGGCAATAAGTAGGTaGTCATTTTGTTGCGACTGT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNISAISR*SFCCDC Trigger: ACAGTCGCAACAAAATGAGCACCTACTTATTGCCGA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCTGGATTCCTTAATGTaGCAATGTCAAAAGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNILDSLM*QCQKLG Trigger: CCCAAGCTTTTGACATTGGCACATTAAGGAATCCAG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCATCTTTCCGAGTCATaGTTCCTGCTGTATTATCTT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIHLSES*FLLYYL Trigger: AAGATAATACAGCAGGAATCATGACTCGGAAAGATG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTATAACAACCTGGTACTaGTCTCTATTTTCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIITTWY*SLFSLL Trigger: GAGCAGAGAAAATAGAGAGCAGTACCAGGTTGTTAT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGCCTGTATAACAACCTaGTACTGCTCTCTATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIACITT*YCSLFS Trigger: AGAAAATAGAGAGCAGTACCAGGTTGTTATACAGGC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTAAGCAAATCCCTACTTaGCAACATCTACGTATTGTT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIKQIPT*QHLRIV Trigger: AACAATACGTAGATGTTGTCAAGTAGGGATTTGCTT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTACATTTCAGGAACACTaGCAGTGTATAAGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNITFQEH*QCISLL Trigger: CAAAAGACTTATACACTGCCAGTGTTCCTGAAATGT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTATTAAATTGTTCCTaGCATCTGGATCGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNILLNCS*HLDRML Trigger: CAGCATACGATCCAGATGCCAGGAACAATTTAATAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTATCTGCAACTTCAGTaGGTTGTCAAATTCAATGTA | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIYLQLQ*VVKFNV Trigger: TACATTGAATTTGACAACCCACTGAAGTTGCAGATA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTTCTTGTAATAGGATaGTGTCAACTGTATGGAACA | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFLVIG*CQLYGT Trigger: TGTTCCATACAGTTGACACCATCCTATTACAAGAAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGCAAATTCCGGAGCATaGTCATTTATATCTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: KRMQATQSNNIDSTSTNIANSGA*SFISRI Trigger: AATTCTAGATATAAATGACCATGCTCCGGAATTTGC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 90 bp | GAGACCTTGCTTAACAATGGAACTGAGTTTAGCCCTACTCCGCACTaGCAGTTCCGTTGTTGCTTCTGTCTCGGTCCTTCTCTTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ETLLNNGTEFSPTPH*QFRCCFCLGPSLPF Trigger: AAAGGGAAGAGAAGGACCGAGACAGAAGCAACAACGGAACTGTCAGTGCGGAGTAGGGCTAAACTCAGTTCCATTGTTAAGCAAGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511822.1 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGCACTGACAGTTCCGTaGTTGCTTCTGTCTCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTALTVP*LLLSRS Trigger: GGACCGAGACAGAAGCAACAACGGAACTGTCAGTGC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 90 bp | TTTTCCTTGCTTAACAATGGAACTGAGTTTAGCCCTACTCCGCACTaGCAGTTCCGTTGTTGCTTCTGTCTCGGTCCTTCTCTTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: FSLLNNGTEFSPTPH*QFRCCFCLGPSLPF Trigger: AAAGGGAAGAGAAGGACCGAGACAGAAGCAACAACGGAACTGTCAGTGCGGAGTAGGGCTAAACTCAGTTCCATTGTTAAGCAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505045.1 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCACATCCAGCCACGCTaGGTGCGACGTAGCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTHIQPR*VRRSIL Trigger: TAAAATGCTACGTCGCACCAAGCGTGGCTGGATGTG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTGGCCACCCATGTCTTaGGCCTGTATAACAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTWPPMS*ACITTW Trigger: CCAGGTTGTTATACAGGCCAAAGACATGGGTGGCCA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 90 bp | CAACTTCAGTGGGTTGTCAAATTCAATGTATTGTTTGTTTTTCCGTaGGGGTGCGCGGCTTCGTTCTTGAAGTCAGTGAGACCAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: QLQWVVKFNVLFVFP*GCAASFLKSVRPRT Trigger: GGTTCTTGGTCTCACTGACTTCAAGAACGAAGCCGCGCACCCTCACGGAAAAACAAACAATACATTGAATTTGACAACCCACTGAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513289.5 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCCACGTCAGGGTCATaGGCTTTTATCCTTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPTSGS*AFILPR Trigger: TCTTGGAAGGATAAAAGCCAATGACCCTGACGTGGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTGGATTGCATGTTTCCTaGATTATCGCAGGCACACAC | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTGLHVS*IIAGTH Trigger: GTGTGTGCCTGCGATAATCAAGGAAACATGCAATCC...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCTCTGTCTAGTTTCTTaGCAGCATGAATGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTLCLVS*QHECLL Trigger: CAGGAGACATTCATGCTGCAAAGAAACTAGACAGAG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTCCCGGACATCGTCTTTaGAAATTATCAGAGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTPGHRL*KLSEVP Trigger: AGGAACCTCTGATAATTTCAAAAGACGATGTCCGGG...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCTGACAGTTCCGTTGTaGCTTCTGTCTCGGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNILTVPL*LLSRSF Trigger: GAAGGACCGAGACAGAAGCAACAACGGAACTGTCAG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGCCAATGTCAAAAGCTaGGGTATCTTCTTCCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIANVKS*GIFFPA Trigger: GGCGGGGAAGAAGATACCCAAGCTTTTGACATTGGC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTATGGTGAAATTCGGATaGAGAGTAAATTCTGGCACT | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTMVKFG*RVNSGT Trigger: AGTGCCAGAATTTACTCTCAATCCGAATTTCACCAT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCATATGGAGGTGCACTaGGGTCTGCGTCGTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIHMEVH*GLRRFL Trigger: AAGAAAACGACGCAGACCCAAGTGCACCTCCATATG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTGCAACTTCAGTGGGTaGTCAAATTCAATGTATTGT | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTCNFSG*SNSMYC Trigger: ACAATACATTGAATTTGACAACCCACTGAAGTTGCA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTGTGGCTACTTTGTTTaGGGTTATTTATTTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTCGYFV*GYLFLW Trigger: CCACAGAAATAAATAACCCAAAACAAAGTAGCCACA...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTCCCAGGAAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTAGGGATGTGGCTACTTaGTTTTGGGTTATTTATTTC | + |
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Preference number: 5 (lower is better) Translates to: FPPRKRMQATQSNNIDSTRDVAT*FWVIYF Trigger: GAAATAAATAACCCAAAACAAAGTAGCCACATCCCT...AGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTTCCTGGGAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCTTCATAGGCATACGTaGCCAGCGAATCATATGGAG | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNILHRHT*PANHME Trigger: CTCCATATGATTCGCTGGCAACGTATGCCTATGAAG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 90 bp | TCTTGTACATCAATATTTTCCCACAGAGGCACAGTCCTCCTTATCTaGAAAATAGTTTCAGGCATTACATCCCGTCTAAGTTTACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCTSIFSHRGTVLLI*KIVSGITSRLSLLS Trigger: AGACAGTAAACTTAGACGGGATGTAATGCCTGAAACTATTTTTCAGATAAGGAGGACTGTGCCTCTGTGGGAAAATATTGATGTACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505020.1 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTCTGCGGTGCAGGATaGCATGTTTCCTTGATTATC | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFCGAG*HVSLII Trigger: GATAATCAAGGAAACATGCAATCCTGCACCGCAGAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTAAGCTTGCCTACATATaGTGTGTCAGTACCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIKLAYI*CVSTCV Trigger: TACACAGGTACTGACACACAATATGTAGGCAAGCTT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTTCTGTCTATAGCCTaGGCACGAAGAATGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFLSIA*ARRMYR Trigger: TCTGTACATTCTTCGTGCCAAGGCTATAGACAGAAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCAGGGTGAGTGTTACTaGCATCCACTCTTAAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIQGECY*HPLLKY Trigger: ATACTTTAAGAGTGGATGCAAGTAACACTCACCCTG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTATTTTCCTTCCGAGATaGTTAGGCAAAGAGGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIIFLPR*LGKEGE Trigger: TTCACCCTCTTTGCCTAACAATCTCGGAAGGAAAAT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTTTTACCGTCATCTTTaGTCAGACCCGCTATCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIFYRHL*SDPLSF Trigger: AAAAGATAGCGGGTCTGACAAAAGATGACGGTAAAA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTATCTGTTGCAGTTACTaGTATAACAGATGTACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIICCSY*YNRCTD Trigger: GTCGGTACATCTGTTATACAAGTAACTGCAACAGAT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTAAAATATGGCTGTCCTaGCAATATGCTATAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIKIWLS*QYAIDH Trigger: GTGGTCTATAGCATATTGCAAGGACAGCCATATTTT...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTCTCAGGAGAATTAAATaGATACGTACTCTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNILRRIK*IRTLGK Trigger: TTTCCCCAGAGTACGTATCAATTTAATTCTCCTGAG...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTTCTTCCACAGATATTTaGACCACAGCTGTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNISSTDI*TTAVSL Trigger: CAAAGATACAGCTGTGGTCAAAATATCTGTGGAAGA...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAATGCAGGCCACTCAATCTAATAACATAGACAGTACTTCCACTAATATTGAGGTAATCATAATCTaGGTTACAATCAGCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRMQATQSNNIDSTSTNIEVIII*VTISCE Trigger: CTCACAGCTGATTGTAACCAAGATTATGATTACCTC...AATATTAGTGGAAGTACTGTCTATGTTATTAGATTGAGTGGCCTGCATTCTCTT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 90 bp | CTTGTAATAGGATGGTGTCAACTGTATGGAACATATAGGTCCAGATaGATAATGGTATATAATGGTAAGTCCTCATTATCTGCAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVIGWCQLYGTYRSR*IMVYNGKSSLSATS Trigger: TGAAGTTGCAGATAATGAGGACTTACCATTATATACCATTATTCATCTGGACCTATATGTTCCATACAGTTGACACCATCCTATTACAAG 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231021.9 ENST00000505045.1 ENST00000511822.1 ENST00000513289.5 |
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| CDS TCA 72 bp | CTTAACAATGGAACTGAGTTTAGCCCTACTCCGCACTaGCAGTTCCGTTGTTGCTTCTGTCTCGGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LNNGTEFSPTPH*QFRCCFCLGPS Trigger: AGAAGGACCGAGACAGAAGCAACAACGGAACTGTCAGTGCGGAGTAGGGCTAAACTCAGTTCCATTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000231021.9 ENST00000505045.1 ENST00000511822.1 |
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| CDS TCA 72 bp | CCCACGTCAGGGTCATTGGCTTTTATCCTTCCAAGATaGGTTCCAAGAGGTACAGACTCAGGAGAATTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PTSGSLAFILPR*VPRGTDSGELN Trigger: ATTTAATTCTCCTGAGTCTGTACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCTGACGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505045.1 |
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| CDS TCA 72 bp | TGGGTTGTCAAATTCAATGTATTGTTTGTTTTTCCGTaGGGGTGCGCGGCTTCGTTCTTGAAGTCAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WVVKFNVLFVFP*GCAASFLKSVR Trigger: TCTCACTGACTTCAAGAACGAAGCCGCGCACCCTCACGGAAAAACAAACAATACATTGAATTTGACAACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513289.5 |
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| CDS GCA 72 bp | TGTATTTTAATGATAAATTCCGATTCCGGTTCCACCTaGCGCCCAGTTTTTCTGTCTATAGCCTTGGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: CILMINSDSGST*RPVFLSIALAR Trigger: TCGTGCCAAGGCTATAGACAGAAAAACTGGGCGGCAGGTGGAACCGGAATCGGAATTTATCATTAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505045.1 |
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| CDS CAA 72 bp | CACGCTTGGTGCGACGTAGCATTTTACCGTCATCTTTaGTCAGACCCGCTATCTTTTTGCTTGATAAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: HAWCDVAFYRHL*SDPLSFCLINN Trigger: GTTATTTATCAAGCAAAAAGATAGCGGGTCTGACAAAAGATGACGGTAAAATGCTACGTCGCACCAAGCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000231021.9 ENST00000505045.1 ENST00000511822.1 ENST00000513289.5 |
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| CDS GCA 72 bp | AATCGTTGTCAAAGATTAAAATCGGCAATAAGTAGGTaGTCATTTTGTTGCGACTGTAGCCATCTTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: NRCQRLKSAISR*SFCCDCSHLSE Trigger: CTCGGAAAGATGGCTACAGTCGCAACAAAATGAGCACCTACTTATTGCCGATTTTAATCTTTGACAACGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505020.1 |
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| CDS CAA 72 bp | CCAGGTGTAAGAATCGTGGATCAGGGTGAGTGTTACTaGCATCCACTCTTAAAGTATAGAGCATTTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGVRIVDQGECY*HPLLKYRAFDF Trigger: AAAATCAAATGCTCTATACTTTAAGAGTGGATGCAAGTAACACTCACCCTGATCCACGATTCTTACACCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231021.9 |
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| CDS TCA 72 bp | TCATTTTGTTGCGACTGTAGCCATCTTTCCGAGTCATaGTTCCTGCTGTATTATCTTTATTATCTACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: SFCCDCSHLSES*FLLYYLYYLQW Trigger: CCATTGTAGATAATAAAGATAATACAGCAGGAATCATGACTCGGAAAGATGGCTACAGTCGCAACAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231021.9 ENST00000505020.1 |
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| CDS TCA 72 bp | GGATGGTGTCAACTGTATGGAACATATAGGTCCAGATaGATAATGGTATATAATGGTAAGTCCTCATTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GWCQLYGTYRSR*IMVYNGKSSLS Trigger: AGATAATGAGGACTTACCATTATATACCATTATTCATCTGGACCTATATGTTCCATACAGTTGACACCATCC 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000231021.9 ENST00000505045.1 ENST00000511822.1 ENST00000513289.5 |
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