RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH7 (Homo sapiens)

Ensembl gene IDs: ENSG00000081138

Ensembl transcript IDs: ENST00000323011.7, ENST00000397968.4, ENST00000536984.6, ENST00000581601.1

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGGCTTGATGCAGGTACCTTGCTGCCTTCCACGAGCCCAGCACTaGGTTGGAGCTGTCCCTATGGCAACTTCAGTGGAACTGTTTGTT +
Preference number: 1 (lower is better)
Translates to: LGLMQVPCCLPRAQH*VGAVPMATSVELFV
Trigger: AACAAACAGTTCCACTGAAGTTGCCATAGGGACAGCTCCAACCCAGTGCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp ATTCCTCTCAATGACAGTACCATGAAGGTATGTACAGGGCATCTTTaGCTCACTGACAACACAGGGCACTACTTTCTCATAGAGGTTTGG +
Preference number: 1 (lower is better)
Translates to: IPLNDSTMKVCTGHL*LTDNTGHYFLIEVW
Trigger: CCAAACCTCTATGAGAAAGTAGTGCCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACATACCTTCATGGTACTGTCATTGAGAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp CTCGGGCTGGAGAAAAATCAGCATGTTCTGATGAGTTTAATACTATaGGGCAGTATGATGGACCTGAATTTAGTGGAGATTGGAGCTCCA +
Preference number: 1 (lower is better)
Translates to: LGLEKNQHVLMSLIL*GSMMDLNLVEIGAP
Trigger: TGGAGCTCCAATCTCCACTAAATTCAGGTCCATCATACTGCCTCATAGTATTAAACTCATCAGAACATGCTGATTTTTCTCCAGCCCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 90 bp ACTGACAACACAGGGCACTACTTTCTCATAGAGGTTTGGTGCCTTTaGAGGTATATGAGAGTTGCTATCTATTCACAAACCACTGAGCAT +
Preference number: 1 (lower is better)
Translates to: TDNTGHYFLIEVWCL*RYMRVAIYSQTTEH
Trigger: ATGCTCAGTGGTTTGTGAATAGATAGCAACTCTCATATACCTGCAAAGGCACCAAACCTCTATGAGAAAGTAGTGCCCTGTGTTGTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp TTTTCAATAGCTCATCATGTTCTATTCCTCTCAATGACAGTACCATaGAGGTATGTACAGGGCATCTTTGACTCACTGACAACACAGGGC +
Preference number: 1 (lower is better)
Translates to: FSIAHHVLFLSMTVP*RYVQGIFDSLTTQG
Trigger: GCCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACATACCTTCATGGTACTGTCATTGAGAGGAATAGAACATGATGAGCTATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp ATTTTTCTCCTACCCTTGTGTGCCAACTATTCAATAACAAGTTTATaGATCTGCATAGCGGGTAACCCTCAGAAAATCTGGTCTGCCGTG +
Preference number: 1 (lower is better)
Translates to: IFLLPLCANYSITSL*ICIAGNPQKIWSAV
Trigger: CACGGCAGACCAGATTTTCTGAGGGTTACCCGCTATGCAGATTCATAAACTTGTTATTGAATAGTTGGCACACAAGGGTAGGAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp GGGCAGTGGAGGTGTCACATAAGGCAATGGAACATTCTAGAATTCTaGTTAACAAGGATCACACTGGTTATAAGCACGTTAAACTCCGTA +
Preference number: 1 (lower is better)
Translates to: GQWRCHIRQWNILEF*LTRITLVISTLNSV
Trigger: TACGGAGTTTAACGTGCTTATAACCAGTGTGATCCTTGTTAATCAGAATTCTAGAATGTTCCATTGCCTTATGTGACACCTCCACTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp AAGAACAATTTATATGTCCTTGTAGCTGTGCTCCTCTTTGAGATGTaGCCTGCAACAGGGCTCAATTGCTTTACTATTAGTTCTCCATTT +
Preference number: 1 (lower is better)
Translates to: KNNLYVLVAVLLFEM*PATGLNCFTISSPF
Trigger: AAATGGAGAACTAATAGTAAAGCAATTGAGCCCTGTTGCAGGTCACATCTCAAAGAGGAGCACAGCTACAAGGACATATAAATTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp ACATCCACACCTCCGTTTAGTGGTATGTGCAACAATCAGCAGTTTTaGCATCATCCAAATGTACTAAACTATTTCATCTTCTTGCAGACA +
Preference number: 1 (lower is better)
Translates to: TSTPPFSGMCNNQQF*HHPNVLNYFIFLQT
Trigger: TGTCTGCAAGAAGATGAAATAGTTTAGTACATTTGGATGATGTCAAAACTGCTGATTGTTGCACATACCACTAAACGGAGGTGTGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp CTCATTATTGTCTTTTTCTCTATTCTGGTGTTTTGTGTTCATCAATaGGGCTGGGATCATCTAAAGGCAGTCCTTTATCTTCCACTCAGT +
Preference number: 1 (lower is better)
Translates to: LIIVFFSILVFCVHQ*GWDHLKAVLYLPLS
Trigger: ACTGAGTGGAAGATAAAGGACTGCCTTTAGATGATCCCAGCCTCATTGATGAACACAAAACACCAGAATAGAGAAAAAGACAATAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 90 bp CATTTACTTCGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTTTaGATAAGTTACAGTTATTCTGGGCATCAAAGTTTTTCCTTAAAA +
Preference number: 1 (lower is better)
Translates to: HLLRVCVSVCVCVCV*ISYSYSGHQSFSLK
Trigger: TTTTAAGGAAAAACTTTGATGCCCAGAATAACTGTAACTTATGCAAACACACACACACACACACACACTCACACACACACGAAGTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 90 bp AGAGCTTCCTGGCAAATAAAGACATTTACCAGATCCCAGATCTGGTaGTTGCTTGTAGAAAAATCAAAAATCTACTTATTGCCTGCAAAT +
Preference number: 1 (lower is better)
Translates to: RASWQIKTFTRSQIW*LLVEKSKIYLLPAN
Trigger: ATTTGCAGGCAATAAGTAGATTTTTGATTTTTCTACAAGCAATCACCAGATCTGGGATCTGGTAAATGTCTTTATTTGCCAGGAAGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAAGCTGTGCTCCTCTTTaGGATGTGACCTGCAACAGG +
Preference number: 2 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSCAPL*DVTCNR
Trigger: CCTGTTGCAGGTCACATCTCAAAGAGGAGCACAGCT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATGGCAGGAGAACGGTGTaGACCCTGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNGRRTV*TLEAEL
Trigger: AAGCTCCGCCTCCAGGGTTCACACCGTTCTCCTGCC...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp GTGAAACTGGCCTCAAATGACATTAGCACTTTCATGGATCTTGGCTaGATGCAGGTACCTTGCTGCCTTCCACGAGCCCAGCACTGGGTT +
Preference number: 2 (lower is better)
Translates to: VKLASNDISTFMDLG*MQVPCCLPRAQHWV
Trigger: AACCCAGTGCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAGCCAAGATCCATGAAAGTGCTAATGTCATTTGAGGCCAGTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp ATCTGCATAGCGGGTAACCCTCAGAAAATCTGGTCTGCCGTGTTTTaGTGCTCTCGTCCATTCTCACAACAATGTCCCACCTCAGAGACG +
Preference number: 2 (lower is better)
Translates to: ICIAGNPQKIWSAVF*CSRPFSQQCPTSET
Trigger: CGTCTCTGAGGTGGGACATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAGGGTTACCCGCTATGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTAGGCAGAGGCTGCAGTaGGCCCAGATCATTCTACTG +
Preference number: 2 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCRQRLQ*AQIILL
Trigger: CAGTAGAATGATCTGGGCTCACTGCAGCCTCTGCCT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTGTACAGGGCATCTTTaGCTCACTGACAACACAGGG +
Preference number: 2 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLCTGHL*LTDNTG
Trigger: CCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATTCTATTCCTCTCAATaGCAGTACCATGAAGGTATG +
Preference number: 2 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRFYSSQ*QYHEGM
Trigger: CATACCTTCATGGTACTGTCATTGAGAGGAATAGAA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATCCTCAGAGGGCAGAGTaGAAAGGCAGCTACCATTAC +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNPQRAE*KGSYHY
Trigger: GTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGG...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATCTCCTCTTTGAGATGTaGCCTGCAACAGGGCTCAAT +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNLLFEM*PATGLN
Trigger: ATTGAGCCCTGTTGCAGGTCACATCTCAAAGAGGAG...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATCCCAAGTTTTGATATaGAACAAGTTCCAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSQVLI*NKFQGF
Trigger: AAAACCCTGGAACTTGTTGCATATCAAAACTTGGGA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATATACATCTCTTCGCTaGTTAGTTCTGAAACAGTAC +
Preference number: 2 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRYTSLR*LVLKQY
Trigger: GTACTGTTTCAGAACTAACCAGCGAAGAGATGTATA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTTTTCCATAAAGAAGTaGCTCCTCTCCCTGTCTACA +
Preference number: 2 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLFSIKK*LLSLST
Trigger: TGTAGACAGGGAGAGGAGTCACTTCTTTATGGAAAA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATCCCAATCACACACATaGAAACGCACACACAGGGCC +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVSQSHT*KRTHRA
Trigger: GGCCCTGTGTGTGCGTTTTCATGTGTGTGATTGGGA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAACCACTACTACCTCCTaGATGTATCTTGTAGACAAC +
Preference number: 2 (lower is better)
Translates to: LMLNDELMGAAHQHGTCITTTTS*MYLVDN
Trigger: GTTGTCTACAAGATACATGCAGGAGGTAGTAGTGGT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCATGTAGCTCGGGCTaGAGAAAAATCAGCATGTTC +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSCSSG*RKISMF
Trigger: GAACATGCTGATTTTTCTCCAGCCCGAGCTACATGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACAGTCACTTGGCAGGTaGCAACAATACGCCAGCATT +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVQSLGR*QQYASI
Trigger: AATGCTGGCGTATTGTTGTCACCTGCCAAGTGACTG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTATAATAGGCAAGTCGTaGCATGTGGTTATTGTGACA +
Preference number: 2 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCIIGKS*HVVIVT
Trigger: TGTCACAATAACCACATGTCACGACTTGCCTATTAT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTGCCTAACAGTCACTTaGCAGGTGACAACAATACGC +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFCLTVT*QVTTIR
Trigger: GCGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp TCTGAGTTATACTTCAAATATACCACTGGAAAGTGTGGCCAACAATaGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: SELYFKYTTGKCGQQ*YYLVSKTPSRPGAV
Trigger: CACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCACACTTTCCAGTGGTATATTTGAAGTATAACTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGCATCTTTGACTCACTaGCAACACAGGGCACTACTT +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVASLTH*QHRALL
Trigger: AAGTAGTGCCCTGTGTTGTCAGTGAGTCAAAGATGC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTGCTTGGTTAATTCTTaGGGGACATATTTGCATCAG +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNCLVNS*GTYLHQ
Trigger: CTGATGCAAATATGTCCCTCAAGAATTAACCAAGCA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTATACCTAATGCTAAATaGCGAGTTAATGGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFIPNAK*RVNGCR
Trigger: GCGGCACCCATTAACTCGTCATTTAGCATTAGGTAT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGCCTGCCCAACATGGTaGAACTCAGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMACPTW*NSVSTK
Trigger: TTTAGTAGAGACTGAGTTTCACCATGTTGGGCAGGC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGAAAAAGTGTCAGAATaGAACGCACACTGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFEKVSE*NAHCLS
Trigger: AGACAGGCAGTGTGCGTTGCATTCTGACACTTTTTC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAAATGCTCAGAGTCTGTaGTCAGTGCAGTCCTTTAGA +
Preference number: 2 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGNAQSL*SVQSFR
Trigger: TCTAAAGGACTGCACTGACCACAGACTCTGAGCATT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGCGAAACTGAGCTTCTaGCCTAGATTTTATAACCAC +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFAKLSF*PRFYNH
Trigger: GTGGTTATAAAATCTAGGTCAGAAGCTCAGTTTCGC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATCACAAAATTAGAACATaGAGCTGTAGGGTAGTGAAT +
Preference number: 2 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNHKIRT*SCRVVN
Trigger: ATTCACTACCCTACAGCTTCATGTTCTAATTTTGTG...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp ACAATGAAAAAGTGTCAGAATGCAACGCACACTGCCTGTCTTGATTaGCTTGAAAAATTTCCCACAGAATTATACGTTACAATGTCGGCC +
Preference number: 2 (lower is better)
Translates to: TMKKCQNATHTACLD*LEKFPTELYVTMSA
Trigger: GGCCGACATTGTAACGTATAATTCTGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAGTGTGCGTTGCATTCTGACACTTTTTCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp TTTCATTCGGTACCATATTTTCTAGTCTTATTGCCTAACAGTCACTaGGCAGGTGACAACAATACGCCAGCATTAACCAGGAATTATGAG +
Preference number: 2 (lower is better)
Translates to: FHSVPYFLVLLPNSH*AGDNNTPALTRNYE
Trigger: CTCATAATTCCTGGTTAATGCTGGCGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCAATAAGACTAGAAAATATGGTACCGAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp AAATATCAAACTTTAATTACAATGATACTCATTTTCTGTACCGAGTaGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCAC +
Preference number: 2 (lower is better)
Translates to: KYQTLITMILIFCTE*SGGISWKPGWRHHH
Trigger: GTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAACTCGGTACAGAAAATGAGTATCATTGTAATTAAAGTTTGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAATTTGTCCCAAGTTTTaGTATGCAACAAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGICPKF*YATSSR
Trigger: CCTGGAACTTGTTGCATATCAAAACTTGGGACAAAT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTATGAGTTTAATACTATaGGGCAGTATGATGGACCTG +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFMSLIL*GSMMDL
Trigger: CAGGTCCATCATACTGCCTCATAGTATTAAACTCAT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTCATAGAGGTTTGGTaGCTTTGCAGGTATATGAGA +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLIEVW*LCRYMR
Trigger: TCTCATATACCTGCAAAGGCACCAAACCTCTATGAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAGCAACAGGGCTCAATTaGTTTACTATTAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGATGLN*FTISSP
Trigger: TGGAGAACTAATAGTAAAGCAATTGAGCCCTGTTGC...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGATCTCCTCTGTAGAGTaGTCTAAAGCAAAGAACTGG +
Preference number: 2 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMISSVE*SKAKNW
Trigger: CCAGTTCTTTGCTTTAGAGCACTCTACAGAGGAGAT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATGCATTTGCATTTCTTaGGCATGTGGATCACTTCAC +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVCICIS*ACGSLH
Trigger: GTGAAGTGATCCACATGCCCAAGAAATGCAAATGCA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATTCTCAGCACCTTGCTaGCTTAACAACTCTGTAATT +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVFSAPC*LNNSVI
Trigger: AATTACAGAGTTGTTAAGTCAGCAAGGTGCTGAGAA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATGTTCCTTAGCTGGCTaGTCTTGGAATATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVCSLAG*SWNISF
Trigger: GAAAGAAATATTCCAAGATCAGCCAGCTAAGGAACA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATTTCTAAAGTTGGGCTaGAAGTTTACAGAATCCTAC +
Preference number: 2 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGFLKLG*KFTESY
Trigger: GTAGGATTCTGTAAACTTGCAGCCCAACTTTAGAAA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGAAACTTTACAAATGTaGAATTCTCCCTCAGTATGC +
Preference number: 2 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFETLQM*NSPSVC
Trigger: GCATACTGAGGGAGAATTGCACATTTGTAAAGTTTC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATTTCTCATAGAGGTTTaGTGCCTTTGCAGGTATATG +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVFLIEV*CLCRYM
Trigger: CATATACCTGCAAAGGCACCAAACCTCTATGAGAAA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAATCAGCAGAGCTTCCTaGCAAATAAAGACATTTACC +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVISRAS*QIKTFT
Trigger: GGTAAATGTCTTTATTTGCCAGGAAGCTCTGCTGAT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp GCATTTCTTGGGCATGTGGATCACTTCACAAATATCATTCCTACATaGTGTAACTATGCCGTTGACATGAAAATAATTGCCTATGTCTAC +
Preference number: 2 (lower is better)
Translates to: AFLGHVDHFTNIIPT*CNYAVDMKIIAYVY
Trigger: GTAGACATAGGCAATTATTTTCATGTCAACGGCATAGTTACACAATGTAGGAATGATATTTGTGAAGTGATCCACATGCCCAAGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp ATAAGATATTTCTCCTTTCATTCGGTACCATATTTTCTAGTCTTATaGCCTAACAGTCACTTGGCAGGTGACAACAATACGCCAGCATTA +
Preference number: 2 (lower is better)
Translates to: IRYFSFHSVPYFLVL*PNSHLAGDNNTPAL
Trigger: TAATGCTGGCGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCAATAAGACTAGAAAATATGGTACCGAATGAAAGGAGAAATATCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp CACAATAAAACACAGCAATATACTGAGGTCTCACATTCTCACGGCTaGTCTTCCTACACTTATTCCAATTCAGAGTACACTTTGTATACA +
Preference number: 2 (lower is better)
Translates to: HNKTQQYTEVSHSHG*SSYTYSNSEYTLYT
Trigger: TGTATACAAAGTGTACTCTGAATTGGAATAAGTGTAGGAAGACAAGCCGTGAGAATGTGAGACCTCAGTATATTGCTGTGTTTTATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAAAAATGGGCATAATTTaGCAAACCCTGAGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVKMGII*QTLSFY
Trigger: ATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 90 bp TTTTCTTGTCATGTTTCTGATAATTACCTGAATTATCTGAAGTTCTaGGAGATTTCTATGAACCATCTCCTTCATGGTGGGTTATCGTCT +
Preference number: 2 (lower is better)
Translates to: FSCHVSDNYLNYLKF*EISMNHLLHGGLSS
Trigger: AGACGATAACCCACCATGAAGGAGATGGTTCATAGAAATCTCCAAGAACTTCAGATAATTCAGGTAATTATCAGAAACATGACAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CCA 72 bp GGTACCTTGCTGCCTTCCACGAGCCCAGCACTGGGTTaGAGCTGTCCCTATGGCAACTTCAGTGGAACTGTT +
Preference number: 3 (lower is better)
Translates to: GTLLPSTSPALG*SCPYGNFSGTV
Trigger: AACAGTTCCACTGAAGTTGCCATAGGGACAGCTCCAACCCAGTGCTGGGCTCGTGGAAGGCAGCAAGGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CCA 72 bp ATGCAGGTACCTTGCTGCCTTCCACGAGCCCAGCACTaGGTTGGAGCTGTCCCTATGGCAACTTCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: MQVPCCLPRAQH*VGAVPMATSVE
Trigger: TTCCACTGAAGTTGCCATAGGGACAGCTCCAACCCAGTGCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 72 bp ACTTTCATGGATCTTGGCTTGATGCAGGTACCTTGCTaGCTTCCACGAGCCCAGCACTGGGTTGGAGCTGTC +
Preference number: 3 (lower is better)
Translates to: TFMDLGLMQVPC*LPRAQHWVGAV
Trigger: GACAGCTCCAACCCAGTGCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAGCCAAGATCCATGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp CCTCAAATGACATTAGCACTTTCATGGATCTTGGCTTaGTGCAGGTACCTTGCTGCCTTCCACGAGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PQMTLALSWILA*CRYLAAFHEPS
Trigger: GCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAGCCAAGATCCATGAAAGTGCTAATGTCATTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAAATATCATTCCTACATaGTGTAACTATGCCGTTGAC +
Preference number: 3 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRNIIPT*CNYAVD
Trigger: GTCAACGGCATAGTTACACAATGTAGGAATGATATT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGGTGGGAGAATTGCTaGAACCTGGGAGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMRWENC*NLGGRG
Trigger: GCCTCTGCCTCCCAGGTTCAAGCAATTCTCCCACCT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR TCA 72 bp GGAGGGATAGAATTAGGAGATATACCTAATGCTAAATaGCGAGTTAATGGGTGCCGCACACCAGCATGGCAC +
Preference number: 3 (lower is better)
Translates to: GGIELGDIPNAK*RVNGCRTPAWH
Trigger: GTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCTAATTCTATCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACAGCAAGGGGAGTTCTaGTTTTCTGTATGTAGTGGT +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIQQGEF*FSVCSG
Trigger: ACCACTACATACAGAAAACAAGAACTCCCCTTGCTG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCTTTCTCATAGAGGTTaGGTGCCTTTGCAGGTATAT +
Preference number: 3 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLSHRG*VPLQVY
Trigger: ATATACCTGCAAAGGCACCAAACCTCTATGAGAAAG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGTCTCTTTCCTGATTTaGTTCCTTAGCTGGCTGATC +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIVSFLI*FLSWLI
Trigger: GATCAGCCAGCTAAGGAACAAAATCAGGAAAGAGAC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAGAAAGGTTGTGTTCTaGAAATCGTCTTTGGAGCAT +
Preference number: 3 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLRKVVF*KSSLEH
Trigger: ATGCTCCAAAGACGATTTCAAGAACACAACCTTTCT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACTCTATTCTGGTGTTTaGTGTTCATCAATGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCILYSGV*CSSMRL
Trigger: CAGCCTCATTGATGAACACAAAACACCAGAATAGAG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGTCATCAAGAGTGCATaGCATTCAGGATGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIVIKSA*HSGWFS
Trigger: TGAAAACCATCCTGAATGCAATGCACTCTTGATGAC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCACATTCTCACGGCTaGTCTTCCTACACTTATTCC +
Preference number: 3 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSHSHG*SSYTYS
Trigger: GGAATAAGTGTAGGAAGACAAGCCGTGAGAATGTGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp TACCATGAAGGTATGTACAGGGCATCTTTGACTCACTaGCAACACAGGGCACTACTTTCTCATAGAGGTTTG +
Preference number: 3 (lower is better)
Translates to: YHEGMYRASLTH*QHRALLSHRGL
Trigger: CAAACCTCTATGAGAAAGTAGTGCCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACATACCTTCATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAAGAGGTTTGGTGCCTTaGCAGGTATATGAGAGTTGC +
Preference number: 3 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGRGLVP*QVYESC
Trigger: GCAACTCTCATATACCTGCAAAGGCACCAAACCTCT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCATGATGACTTGCAATaGCCTTCCTTCCTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFHDDLQ*PSFLWH
Trigger: GTGCCAAAGGAAGGAAGGCAATTGCAAGTCATCATG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCACTTCATTTCTAAAGTaGGGCTGCAAGTTTACAGAA +
Preference number: 3 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLTSFLK*GCKFTE
Trigger: TTCTGTAAACTTGCAGCCCAACTTTAGAAATGAAGT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACAAAATGGGCATAATTaGGCAAACCCTGAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIQNGHN*ANPEFL
Trigger: TAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACTTAGCTGGCTGATCTaGGAATATTTCTTTCAGAGA +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCILSWLI*EYFFQR
Trigger: TCTCTGAAAGAAATATTCCAAGATCAGCCAGCTAAG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAACTGCCTGTCTTGATTaGCTTGAAAAATTTCCCACA +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCITACLD*LEKFPT
Trigger: TGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAGT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp AATGACAGTACCATGAAGGTATGTACAGGGCATCTTTaGCTCACTGACAACACAGGGCACTACTTTCTCATA +
Preference number: 3 (lower is better)
Translates to: NDSTMKVCTGHL*LTDNTGHYFLI
Trigger: TATGAGAAAGTAGTGCCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACATACCTTCATGGTACTGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp GAACAATTTATATGTCCTTGTAGCTGTGCTCCTCTTTaGGATGTGACCTGCAACAGGGCTCAATTGCTTTAC +
Preference number: 3 (lower is better)
Translates to: EQFICPCSCAPL*DVTCNRAQLLY
Trigger: GTAAAGCAATTGAGCCCTGTTGCAGGTCACATCTCAAAGAGGAGCACAGCTACAAGGACATATAAATTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp CTAGGGCACAGCAAAAATGTGGCGAAACTGAGCTTCTaGCCTAGATTTTATAACCACAGACCAGAGGTAATT +
Preference number: 3 (lower is better)
Translates to: LGHSKNVAKLSF*PRFYNHRPEVI
Trigger: AATTACCTCTGGTCTGTGGTTATAAAATCTAGGTCAGAAGCTCAGTTTCGCCACATTTTTGCTGTGCCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 72 bp GACAACACAGGGCACTACTTTCTCATAGAGGTTTGGTaGCTTTGCAGGTATATGAGAGTTGCTATCTATTCA +
Preference number: 3 (lower is better)
Translates to: DNTGHYFLIEVW*LCRYMRVAIYS
Trigger: TGAATAGATAGCAACTCTCATATACCTGCAAAGGCACCAAACCTCTATGAGAAAGTAGTGCCCTGTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CCA 72 bp CAACTAACCTCAATTGTAGTCATCAGCAGAGCTTCCTaGCAAATAAAGACATTTACCAGATCCCAGATCTGG +
Preference number: 3 (lower is better)
Translates to: QLTSIVVISRAS*QIKTFTRSQIW
Trigger: CCAGATCTGGGATCTGGTAAATGTCTTTATTTGCCAGGAAGCTCTGCTGATGACTACAATTGAGGTTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAATTTGTCCCAAGTTTaGATATGCAACAAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCINLSQV*ICNKFQ
Trigger: CTGGAACTTGTTGCATATCAAAACTTGGGACAAATT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAACTATTTCATCTTCTaGCAGACAACAAGGGGATTA +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCINYFIF*QTTRGL
Trigger: TAATCCCCTTGTTGTCTGCAAGAAGATGAAATAGTT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACAACAATCAGCAGTTTaGACATCATCCAAATGTACT +
Preference number: 3 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIQQSAV*TSSKCT
Trigger: AGTACATTTGGATGATGTCAAAACTGCTGATTGTTG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp TTATATGTCCTTGTAGCTGTGCTCCTCTTTGAGATGTaGCCTGCAACAGGGCTCAATTGCTTTACTATTAGT +
Preference number: 3 (lower is better)
Translates to: LYVLVAVLLFEM*PATGLNCFTIS
Trigger: ACTAATAGTAAAGCAATTGAGCCCTGTTGCAGGTCACATCTCAAAGAGGAGCACAGCTACAAGGACATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp CTACCCTTGTGTGCCAACTATTCAATAACAAGTTTATaGATCTGCATAGCGGGTAACCCTCAGAAAATCTGG +
Preference number: 3 (lower is better)
Translates to: LPLCANYSITSL*ICIAGNPQKIW
Trigger: CCAGATTTTCTGAGGGTTACCCGCTATGCAGATTCATAAACTTGTTATTGAATAGTTGGCACACAAGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 72 bp GCTCAACTCAAACTTAAACACATGATGACTTGCAATTaGCTTCCTTCCTTTGGCACATCTAAACCACACAGA +
Preference number: 3 (lower is better)
Translates to: AQLKLKHMMTCN*LPSFGTSKPHR
Trigger: TCTGTGTGGTTTAGATGTGCCAAAGGAAGGAAGGCAATTGCAAGTCATCATGTGTTTAAGTTTGAGTTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 72 bp CGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTTTaGATAAGTTACAGTTATTCTGGGCATCAAAGTTTT +
Preference number: 3 (lower is better)
Translates to: RVCVSVCVCVCV*ISYSYSGHQSF
Trigger: AAAACTTTGATGCCCAGAATAACTGTAACTTATGCAAACACACACACACACACACACACTCACACACACACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAATTGCCTTCCTTCCTTaGGCACATCTAAACCACACA +
Preference number: 3 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVIAFLP*AHLNHT
Trigger: TGTGTGGTTTAGATGTGCCAAAGGAAGGAAGGCAAT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATCACTGTACCTGGAGTaGGGAAGAGATATGAAGAAT +
Preference number: 3 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSLYLE*GRDMKN
Trigger: ATTCTTCATATCTCTTCCCAACTCCAGGTACAGTGA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTAACCCTGAGTTTCTATaGATGCTCCTGTATGGACAA +
Preference number: 3 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFNPEFL*MLLYGQ
Trigger: TTGTCCATACAGGAGCATCAATAGAAACTCAGGGTT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCGCACACTGCCTGTCTaGATTTGCTTGAAAAATTTC +
Preference number: 3 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFRTLPV*ICLKNF
Trigger: GAAATTTTTCAAGCAAATCAAGACAGGCAGTGTGCG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATTCTTGAAATCGTCTTaGGAGCATGTAGAACTCATG +
Preference number: 3 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGFLKSS*EHVELM
Trigger: CATGAGTTCTACATGCTCCAAAGACGATTTCAAGAA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATTTTACTCAATAGGTTaGCAGCAAGAAAGGTTGTGT +
Preference number: 3 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGFYSIG*QQERLC
Trigger: ACACAACCTTTCTTGCTGCAAACCTATTGAGTAAAA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR GCA 72 bp AGTGTCAGAATGCAACGCACACTGCCTGTCTTGATTTaGTTGAAAAATTTCCCACAGAATTATACGTTACAA +
Preference number: 3 (lower is better)
Translates to: SVRMQRTLPVLI*LKNFPQNYTLQ
Trigger: TTGTAACGTATAATTCTGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAGTGTGCGTTGCATTCTGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp ACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTaGGGTACCAAGAATTGCGGAAATTATTTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: TTEVFIVVCQVF*GTKNCGNYFLL
Trigger: TAGAAGAAAATAATTTCCGCAATTCTTGGTACCTCAAAAGACCTGACACACTACAATGAAGACTTCTGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp AAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTaGTGCTCCTGTATGGACAAGTGGAAAATAATTAAA +
Preference number: 3 (lower is better)
Translates to: KMGIIWQTLSFY*CSCMDKWKIIK
Trigger: TTTAATTATTTTCCACTTGTCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR TCA 72 bp AGGTTTTATGCTTCATGTCTCATTTCCAAGGTTAAATaGACTGGATTTTCAGGATCAATTCTGCAGTCAATT +
Preference number: 3 (lower is better)
Translates to: RFYASCLISKVK*TGFSGSILQSI
Trigger: AATTGACTGCAGAATTGATCCTGAAAATCCAGTTCATTTAACCTTGGAAATGAGACATGAAGCATAAAACCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCTCTTGGGGACCCAGTaGGCGCAGCTCCGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLLGTQ*AQLRAR
Trigger: CCGCGCGCGGAGCTGCGCGCACTGGGTCCCCAAGAG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGAACGTGCGCTCGGCTaGCGGACGCCCGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLERALG*RTPAGS
Trigger: AGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCACGCCCGCGGGCTCTTaGGGACCCAGTGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLTPAGS*GPSARS
Trigger: GCTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGAACGTGCGCTCGGCTaGCGGACGCCCGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCERALG*RTPAGS
Trigger: AGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTACGCCCGCGGGCTCTTaGGGACCCAGTGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCTPAGS*GPSARS
Trigger: GCTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGGCCCAGGGAGCCACTaGGACTTCGGCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCGPGSH*DFGASQ
Trigger: CTGGGAGGCGCCGAAGTCTCAGTGGCTCCCTGGGCC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGCGCGCGGGGCAGACTaGAGGAACCGGCTCGACACC +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCARGAD*RNRLDT
Trigger: GGTGTCGAGCCGGTTCCTCCAGTCTGCCCCGCGCGC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATCAGGGCTCCTGTACTaGGGCCAGCAGGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSGLLY*GQQVGH
Trigger: ATGTCCTACCTGCTGGCCTCAGTACAGGAGCCCTGA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTACCTGGGGCCTCGCTaGCCTCCCCACGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCYLGPR*PPHGVR
Trigger: TCTGACGCCGTGGGGAGGGCAGCGAGGCCCCAGGTA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGGCAGGAGAACGGTGTaGACCCTGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLGRRTV*TLEAEL
Trigger: AAGCTCCGCCTCCAGGGTTCACACCGTTCTCCTGCC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGCTCGCCCGGGCAGCTaGGACGCAGGGTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMARPGS*DAGSGA
Trigger: GGCTCCGGACCCTGCGTCTCAGCTGCCCGGGCGAGC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAGGGACCCGGGCGTGTaGATCCGAAAGAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLRDPGV*IRKNVR
Trigger: GCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATTGATGCAGGTACCTTaGTGCCTTCCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRLMQVP*CLPRAQ
Trigger: CTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATCTGCATTGCAGGTCTaGGCTACGCCGTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSALQV*ATPSAS
Trigger: TGATGCTGACGGCGTAGCCCAGACCTGCAATGCAGA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGGTGTAGTAAGTACCTaGGGCCTCGCTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLGVVST*GLAALP
Trigger: GGGGAGGGCAGCGAGGCCCCAGGTACTTACTACACC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGCTCTTGGGGACCCAGTaGGCGCAGCTCCGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMLLGTQ*AQLRAR
Trigger: CCGCGCGCGGAGCTGCGCGCACTGGGTCCCCAAGAG...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCGCATCCGAAAGAACGTaGGCTCGGCTGCCGGACGCC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGASERT*ARLPDA
Trigger: GGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGC...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTAGGGACCCGGGCGTGTaGATCCGAAAGAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCRDPGV*IRKNVR
Trigger: GCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGTGGGCGGCGGGCGCCTaGTGTCAGCGCTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMWAAGA*CQRCRR
Trigger: CCTCCGACAGCGCTGACAGCAGGCGCCCGCCGCCCA...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGGAAGAGGGCGACGATaGTGGGCGGCGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYGRGRR*WAAGAC
Trigger: GCAGGCGCCCGCCGCCCACCATCGTCGCCCTCTTCC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAGAAGAATCTGGGTCATaGGCTGCTACAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLREESGS*AATVPM
Trigger: CATTGGCACTGTAGCAGCTCATGACCCAGATTCTTC...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATGTACAGGGCATCTTTaGCTCACTGACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRCTGHL*LTDNTG
Trigger: CCCTGTGTTGTCAGTGAGTCAAAGATGCCCTGTACA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATACCTGGGGCCTCGCTaGCCTCCCCACGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGYLGPR*PPHGVR
Trigger: TCTGACGCCGTGGGGAGGGCAGCGAGGCCCCAGGTA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGCTGCGTCTGCTCACTaGGAGGGGCCCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYAASAH*EGPLRL
Trigger: GAGCCGGAGGGGCCCCTCGCAGTGAGCAGACGCAGC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAAGGCACAGTTCCAGTTaGCTTAGTAGCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRRHSSS*LSSSCL
Trigger: GAGGCAAGAGCTACTAAGCCAACTGGAACTGTGCCT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGAGGGCGACGATGGTaGGCGGCGGGCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMRGRRW*AAGACC
Trigger: ACAGCAGGCGCCCGCCGCCCACCATCGTCGCCCTCT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAACTTGCCCCTTCGCCTaGCAAGATGTATTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRTCPFA*QDVFDG
Trigger: TCCATCAAATACATCTTGTCAGGCGAAGGGGCAAGT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACCACGGGTTTGTTGGTaGGCCTATCCAGCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIPRVCW*AYPALE
Trigger: CTCAAGCGCTGGATAGGCTCACCAACAAACCCGTGG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTCAGGGCTCCTGTACTaGGGCCAGCAGGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCSGLLY*GQQVGH
Trigger: ATGTCCTACCTGCTGGCCTCAGTACAGGAGCCCTGA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACATAGGCCTCTGCATTaGAGGTCTGGGCTACGCCGT +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIHRPLH*RSGLRR
Trigger: ACGGCGTAGCCCAGACCTGCAATGCAGAGGCCTATG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAATGCAGGTACCTTGCTaGCTTCCACGAGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIMQVPC*LPRAQH
Trigger: GTGCTGGGCTCGTGGAAGGCAGCAAGGTACCTGCAT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATGCCTAACAGTCACTTaGCAGGTGACAACAATACGC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRCLTVT*QVTTIR
Trigger: GCGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 72 bp GCGGGTAACCCTCAGAAAATCTGGTCTGCCGTGTTTTaGTGCTCTCGTCCATTCTCACAACAATGTCCCACC +
Preference number: 4 (lower is better)
Translates to: AGNPQKIWSAVF*CSRPFSQQCPT
Trigger: GGTGGGACATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAGGGTTACCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 72 bp GCCTCAAATGACATTAGCACTTTCATGGATCTTGGCTaGATGCAGGTACCTTGCTGCCTTCCACGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASNDISTFMDLG*MQVPCCLPRAQ
Trigger: CTGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAGCCAAGATCCATGAAAGTGCTAATGTCATTTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAGCTGTGCTCCTCTTTaGGATGTGACCTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLSCAPL*DVTCNR
Trigger: CCTGTTGCAGGTCACATCTCAAAGAGGAGCACAGCT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCCTCAGAGGGCAGAGTaGAAAGGCAGCTACCATTAC +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLPQRAE*KGSYHY
Trigger: GTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAATACCTAATGCTAAATaGCGAGTTAATGGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRIPNAK*RVNGCR
Trigger: GCGGCACCCATTAACTCGTCATTTAGCATTAGGTAT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTGGCTTAGTAGCTCTTaGCTCCGGCAGGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGWLSSS*LRQGVS
Trigger: GCTGACACCCTGCCGGAGGCAAGAGCTACTAAGCCA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGCATCCGAAAGAACGTaGGCTCGGCTGCCGGACGCC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYASERT*ARLPDA
Trigger: GGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAGCTATTGGAAGAATCTaGGTCATGAGCTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRAIGRI*VMSCYS
Trigger: ACTGTAGCAGCTCATGACCCAGATTCTTCCAATAGC...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTACATAGAGGGGGTCTaGACCCATGTATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLYIEGV*THVFLQ
Trigger: CTGGAGGAATACATGGGTTCAGACCCCCTCTATGTA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCAGTTGTCGTGTCACTaGACGGACCCAAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCQLSCH*TDPSSE
Trigger: TTCTGAGCTTGGGTCCGTTCAGTGACACGACAACTG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCAGTCACTTGGCAGGTaGCAACAATACGCCAGCATT +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLQSLGR*QQYASI
Trigger: AATGCTGGCGTATTGTTGTCACCTGCCAAGTGACTG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAATTAGGACATACTGGTaGAGTGCCATCGTAATGACA +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRIRTYW*SAIVMT
Trigger: TGTCATTACGATGGCACTTCACCAGTATGTCCTAAT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATCATGGATCTTGGCTTaGTGCAGGTACCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCISWILA*CRYLAA
Trigger: GGCAGCAAGGTACCTGCATCAAGCCAAGATCCATGA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGATTCCACACCCAGCTaGGCTTGGTCCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVDSTPS*AWSGTS
Trigger: GGAGGTCCCGGACCAAGCGCAGCTGGGTGTGGAATC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTACACCCAGCTGCGCTTaGTCCGGGACCTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFTPSCA*SGTSLI
Trigger: AATCAGGGAGGTCCCGGACCAAGCGCAGCTGGGTGT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAACAGCACTGATTTTCTaGATAACCTGCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCITALIF*ITCPGW
Trigger: CCAGCCGGGGCAGGTTATCCAGAAAATCAGTGCTGT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGGAAGCCGTTTCTCCTaGTCAGTATTGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLGSRFS*SVLRLC
Trigger: ACACAGCCTCAATACTGACCAGGAGAAACGGCTTCC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGGTGTAGTAAGTACCTaGGGCCTCGCTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYGVVST*GLAALP
Trigger: GGGGAGGGCAGCGAGGCCCCAGGTACTTACTACACC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAACCAGAGGTAATTTCTaGTATACCACACTGACACCA +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRTRGNF*YTTLTP
Trigger: TGGTGTCAGTGTGGTATACCAGAAATTACCTCTGGT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATATCCTTTGCCTGAATaGCAAGCAAATACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRYPLPE*QANTGL
Trigger: AAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGACAGTCCTCCATTTTaGCCAACCATATCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLDSPPF*PTISFA
Trigger: GGCAAAGGATATGGTTGGTCAAAATGGAGGACTGTC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCAGTTGTCGTGTCACTaGACGGACCCAAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGQLSCH*TDPSSE
Trigger: TTCTGAGCTTGGGTCCGTTCAGTGACACGACAACTG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATGTTCCTTAGCTGGCTaGTCTTGGAATATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRCSLAG*SWNISF
Trigger: GAAAGAAATATTCCAAGATCAGCCAGCTAAGGAACA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAAAAAGAGCTATTAGCTaGAGAAAATGGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRKRAIS*RKWQNS
Trigger: GGAGTTCTGCCATTTTCTGCAGCTAATAGCTCTTTT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATCTCCTACCCTTGTGTaGCAACTATTCAATAACAAG +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSPTLV*QLFNNK
Trigger: CTTGTTATTGAATAGTTGGCACACAAGGGTAGGAGA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCGGCAGGGTGTCAGCTaGGAGTCCAGAGATAATAAT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCRQGVS*ESRDNN
Trigger: ATTATTATCTCTGGACTCCCAGCTGACACCCTGCCG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATACACCCAGCTGCGCTTaGTCCGGGACCTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYTPSCA*SGTSLI
Trigger: AATCAGGGAGGTCCCGGACCAAGCGCAGCTGGGTGT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATAGACACAGGCGAGTATaGCTATCAGGGCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNRHRRV*LSGLLY
Trigger: GTACAGGAGCCCTGATAGCCATACTCGCCTGTGTCT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTTGGAGCTGTCCCTATaGCAACTTCAGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLELSL*QLQWNC
Trigger: ACAGTTCCACTGAAGTTGCCATAGGGACAGCTCCAA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAAAATGGGAGACACCTaGCATGGTGACTCACACCTG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIKMGDT*HGDSHL
Trigger: CAGGTGTGAGTCACCATGCCAGGTGTCTCCCATTTT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCAGAGGTCACCACTGCTaGATAGCCTTCGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGRGHHC*IAFAKE
Trigger: TTCTTTGGCGAAGGCTATTCAGCAGTGGTGACCTCT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATCCACGGGTTTGTTGGTaGGCCTATCCAGCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYPRVCW*AYPALE
Trigger: CTCAAGCGCTGGATAGGCTCACCAACAAACCCGTGG...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCATAGGGTACAAGGGTaGAGAGAACACAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFHRVQG*REHRGL
Trigger: GAGCCCCCTGTGTTCTCTTCACCCTTGTACCCTATG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAGTTGGTGCTGCTAAGTaGGGGAGATCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGVGAAK*GRSTVH
Trigger: GTGGACAGTGGATCTCCCTCACTTAGCAGCACCAAC...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAAGGTTCCAAGGCTATaGGTACAAACTCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIKVPRL*VQTLLA
Trigger: GGCCAAGAGAGTTTGTACTCATAGCCTTGGAACCTT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAGGAGTCTATTTGCCTaGAAGATAGCACTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLRSLFA*KIALEL
Trigger: CAGCTCAAGTGCTATCTTTCAGGCAAATAGACTCCT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAACACAGCAATATACTaGGGTCTCACATTCTCACGG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLNTAIY*GLTFSR
Trigger: CCGTGAGAATGTGAGACCTCAGTATATTGCTGTGTT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGGTGGGAGAATTGCTTaGACCTGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMGGRIA*TWEAEA
Trigger: AGCCTCTGCCTCCCAGGTTCAAGCAATTCTCCCACC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTGGCTTAGTAGCTCTTaGCTCCGGCAGGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYWLSSS*LRQGVS
Trigger: GCTGACACCCTGCCGGAGGCAAGAGCTACTAAGCCA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAATTTTCTGGATAACCTaGCCCGGCTGGGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIIFWIT*PGWAFS
Trigger: TGAAAATGCCCAGCCGGGGCAGGTTATCCAGAAAAT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGCATAGGCCTCTGCATTaGAGGTCTGGGCTACGCCGT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMHRPLH*RSGLRR
Trigger: ACGGCGTAGCCCAGACCTGCAATGCAGAGGCCTATG...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATTTCTAAAGTTGGGCTaGAAGTTTACAGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRFLKLG*KFTESY
Trigger: GTAGGATTCTGTAAACTTGCAGCCCAACTTTAGAAA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTGTAGAGTGTTGGATTaGAAGAGGTCACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCCRVLD*KRSPLL
Trigger: CAGCAGTGGTGACCTCTTCCAATCCAACACTCTACA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATATGATATTCCCAACCTaGGTAGCTTCCGACACCTCC +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNMIFPT*VASDTS
Trigger: GGAGGTGTCGGAAGCTACCCAGGTTGGGAATATCAT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCTGGTGTCCATTGGATaGCTCATCTTTATCCACAGC +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCLVSIG*LIFIHS
Trigger: GCTGTGGATAAAGATGAGCCATCCAATGGACACCAG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCGCCTTCGCCAAAGAATaGTGTAGTAAGTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGAFAKE*CSKYLG
Trigger: CCCCAGGTACTTACTACACCATTCTTTGGCGAAGGC...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAATGCTCAGAGTCTGTaGTCAGTGCAGTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLNAQSL*SVQSFR
Trigger: TCTAAAGGACTGCACTGACCACAGACTCTGAGCATT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATGTCACTTGTACCACTaGGGTCCCCACGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVCHLYH*GPHGRH
Trigger: ATGTCTCCCGTGGGGACCTCAGTGGTACAAGTGACA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTGTCACTTGTACCACTaGGGTCCCCACGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYCHLYH*GPHGRH
Trigger: ATGTCTCCCGTGGGGACCTCAGTGGTACAAGTGACA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATGTCTTTGGCTCCACTaGGAAGTACGGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGCLWLH*EVRLSL
Trigger: CAAGGACAGCCGTACTTCTCAGTGGAGCCAAAGACA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCACCATATCCTTTGCCTaGATGACAAGCAAATACTGG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLTISFA*MTSKYW
Trigger: CCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATGAGGTGGATTATCGTTaGCATCAGTTAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNEVDYR*HQLGSQ
Trigger: CTGTGACCCTAACTGATGTCAACGATAATCCACCTC...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATCATAGGGTACAAGGGTaGAGAGAACACAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYHRVQG*REHRGL
Trigger: GAGCCCCCTGTGTTCTCTTCACCCTTGTACCCTATG...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATGGCAGATAGTAAACTaGTTGTTCCTGTCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIWQIVN*LFLSPE
Trigger: TTCCGGAGACAGGAACAATCAGTTTACTATCTGCCA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGTTGGTGCTGCTAAGTaGGGGAGATCCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMVGAAK*GRSTVH
Trigger: GTGGACAGTGGATCTCCCTCACTTAGCAGCACCAAC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATCCCAATCACACACATaGAAACGCACACACAGGGCC +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSQSHT*KRTHRA
Trigger: GGCCCTGTGTGTGCGTTTTCATGTGTGTGATTGGGA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAATTGCTTGGGCATCCTaGTCACTTTTCATAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIIAWAS*SLFIGV
Trigger: CACACCTATGAAAAGTGATCAGGATGCCCAAGCAAT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGGCAGAGGCTGCAGTaGGCCCAGATCATTCTACTG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMRQRLQ*AQIILL
Trigger: CAGTAGAATGATCTGGGCTCACTGCAGCCTCTGCCT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACATTTCGGGAACTCCTaGCGTGTATGGGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGHFGNS*RVWAIQ
Trigger: TTGGATGGCCCATACACGGCAGGAGTTCCCGAAATG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATAACTCCTGCCGTGTATaGGCCATCCAAAAATTTGGG +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNNSCRV*AIQKFG
Trigger: CCCAAATTTTTGGATGGCCCATACACGGCAGGAGTT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGCTATTGGAAGAATCTaGGTCATGAGCTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCAIGRI*VMSCYS
Trigger: ACTGTAGCAGCTCATGACCCAGATTCTTCCAATAGC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATCTTCCTACTTGAGATaGATTCTGGCTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCISSYLR*ILALHC
Trigger: GCAATGGAGAGCCAGAATCCATCTCAAGTAGGAAGA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATGGTCTCATAGTCCATaGCAAATTCAGGGGCGTTAT +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIWSHSP*QIQGRY
Trigger: ATAACGCCCCTGAATTTGCCATGGACTATGAGACCA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATACATTTTCACAGACGGTaGTCTCATAGTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIHFHRR*SHSPWQ
Trigger: TTGCCATGGACTATGAGACCACCGTCTGTGAAAATG...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCATTTTCACAGACGGTaGTCTCATAGTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCHFHRR*SHSPWQ
Trigger: TTGCCATGGACTATGAGACCACCGTCTGTGAAAATG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGTCTGCATTGCAGGTCTaGGCTACGCCGTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMSALQV*ATPSAS
Trigger: TGATGCTGACGGCGTAGCCCAGACCTGCAATGCAGA...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTCAGGAGGTATAAGCTaGAAACCAGGATGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFSGGIS*KPGWRH
Trigger: GTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAACCCTCAGAAAATCTaGTCTGCCGTGTTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCINPQKI*SAVFLC
Trigger: GCACAAAAACACGGCAGACCAGATTTTCTGAGGGTT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAGGTGGAAGGGTTGTTaGGATTTTTCTCCTACCCTT +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIRWKGC*DFSPTL
Trigger: AAGGGTAGGAGAAAAATCCCAACAACCCTTCCACCT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATAAAAAGTGGGGGCAGTaGAGGTGTCACATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNKKWGQ*RCHIRQ
Trigger: TTGCCTTATGTGACACCTCCACTGCCCCCACTTTTT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGTGTCTTTGGCTCCACTaGGAAGTACGGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMCLWLH*EVRLSL
Trigger: CAAGGACAGCCGTACTTCTCAGTGGAGCCAAAGACA...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTGTGTTTCTGTCAATTaGGTACCTCACAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCCVSVN*VPHRAI
Trigger: AATAGCCCTGTGAGGTACTCAATTGACAGAAACACA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAGGACTGTGATATTGTaGATAGCATTTGTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLRTVIL*IAFVSR
Trigger: TCGAGAGACAAATGCTATTCACAATATCACAGTCCT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCTCCTGGTCAGTATTaGGGCTGTGTTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSPGQY*GCVVFV
Trigger: AACAAAGACAACACAGCCTCAATACTGACCAGGAGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCAATGACAGTACCATaGAGGTATGTACAGGGCATC +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSMTVP*RYVQGI
Trigger: GATGCCCTGTACATACCTTCATGGTACTGTCATTGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCTCCTCTTTGAGATGTaGCCTGCAACAGGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFLLFEM*PATGLN
Trigger: ATTGAGCCCTGTTGCAGGTCACATCTCAAAGAGGAG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTGCTTGGTTAATTCTTaGGGGACATATTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLCLVNS*GTYLHQ
Trigger: CTGATGCAAATATGTCCCTCAAGAATTAACCAAGCA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATTGATGTCTCTTTCCTaGTTTTGTTCCTTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCILMSLS*FCSLAG
Trigger: GCCAGCTAAGGAACAAAATCAGGAAAGAGACATCAA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATCATTTCGGGAACTCCTaGCGTGTATGGGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYHFGNS*RVWAIQ
Trigger: TTGGATGGCCCATACACGGCAGGAGTTCCCGAAATG...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAATGATGACTTGCAATTaGCTTCCTTCCTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIMMTCN*LPSFGT
Trigger: TGTGCCAAAGGAAGGAAGGCAATTGCAAGTCATCAT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATCATATATATTTCACTTaGCTCCAGGCATCGTGGACC +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNHIYFT*LQASWT
Trigger: GGTCCACGATGCCTGGAGGCAAGTGAAATATATATG...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCTGCCGTGTTTTTGTaGTCTCGTCCATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSAVFL*SRPFSQ
Trigger: TTGTGAGAATGGACGAGAGCACAAAAACACGGCAGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGCCCAGATCATTCTACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMPRSFY*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTAGAATGATCTGGG...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCATTAGCTGCAGAAAATaGCAGAACTCCACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGISCRK*QNSTLP
Trigger: GGGCAAAGTGGAGTTCTGCCATTTTCTGCAGCTAAT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATACAGCACTGATTTTCTaGATAACCTGCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYTALIF*ITCPGW
Trigger: CCAGCCGGGGCAGGTTATCCAGAAAATCAGTGCTGT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGACACAGGCGAGTATaGCTATCAGGGCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMRHRRV*LSGLLY
Trigger: GTACAGGAGCCCTGATAGCCATACTCGCCTGTGTCT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGAGGTCACCACTGCTaGATAGCCTTCGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMRGHHC*IAFAKE
Trigger: TTCTTTGGCGAAGGCTATTCAGCAGTGGTGACCTCT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAAGTCTCTTGGTGGCATaGATATCCCCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSLLVA*ISPVFS
Trigger: TGAGAACACTGGGGATATTCATGCCACCAAGAGACT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGAAGAATCTGGGTCATaGGCTGCTACAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMEESGS*AATVPM
Trigger: CATTGGCACTGTAGCAGCTCATGACCCAGATTCTTC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTAGGACTGTGATATTGTaGATAGCATTTGTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCRTVIL*IAFVSR
Trigger: TCGAGAGACAAATGCTATTCACAATATCACAGTCCT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGCATCTTTGACTCACTaGCAACACAGGGCACTACTT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFASLTH*QHRALL
Trigger: AAGTAGTGCCCTGTGTTGTCAGTGAGTCAAAGATGC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATTCTATTCCTCTCAATaGCAGTACCATGAAGGTATG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIFYSSQ*QYHEGM
Trigger: CATACCTTCATGGTACTGTCATTGAGAGGAATAGAA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAGTTGGGAAGAGATATaGAGAATTAGTTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCISWEEI*RISSCE
Trigger: CTCACAGGAACTAATTCTTCATATCTCTTCCCAACT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTTTTCCATAAAGAAGTaGCTCCTCTCCCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNFSIKK*LLSLST
Trigger: TGTAGACAGGGAGAGGAGTCACTTCTTTATGGAAAA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAAAAATGTGGCGAAACTaGGCTTCTGACCTAGATTTT +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIKMWRN*ASDLDF
Trigger: AAAATCTAGGTCAGAAGCTCAGTTTCGCCACATTTT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTCTTGGAGATTTCTATaGACCATCTCCTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNSWRFL*TISFMV
Trigger: CACCATGAAGGAGATGGTTCATAGAAATCTCCAAGA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGGATGCTGCAAAATCTaGGTTACTGCAAATATGAGT +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCGCCKI*VTANMS
Trigger: ACTCATATTTGCAGTAACTCAGATTTTGCAGCATCC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTAAAAGAGCTATTAGCTaGAGAAAATGGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCKRAIS*RKWQNS
Trigger: GGAGTTCTGCCATTTTCTGCAGCTAATAGCTCTTTT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGTTGAGGTTTCTCAGTaGAGCCATGTCAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFVEVSQ*SHVKRF
Trigger: GAAGCGTTTGACATGGCTGCACTGAGAAACCTCAAC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCAGAGTCTGTGGTCAGTaGAGTCCTTTAGATAAGTCT +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGRVCGQ*SPLDKS
Trigger: AGACTTATCTAAAGGACTGCACTGACCACAGACTCT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGCAACAGGGCTCAATTaGTTTACTATTAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIATGLN*FTISSP
Trigger: TGGAGAACTAATAGTAAAGCAATTGAGCCCTGTTGC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCACCACTACTACCTCCTaGATGTATCTTGTAGACAAC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGTTTTS*MYLVDN
Trigger: GTTGTCTACAAGATACATGCAGGAGGTAGTAGTGGT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGACATACTGGTGAAGTaGCATCGTAATGACAATATA +
Preference number: 4 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLDILVK*HRNDNI
Trigger: TATATTGTCATTACGATGGCACTTCACCAGTATGTC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATGTAGAGTGTTGGATTaGAAGAGGTCACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGCRVLD*KRSPLL
Trigger: CAGCAGTGGTGACCTCTTCCAATCCAACACTCTACA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACGGCAGGGTGTCAGCTaGGAGTCCAGAGATAATAAT +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVRQGVS*ESRDNN
Trigger: ATTATTATCTCTGGACTCCCAGCTGACACCCTGCCG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAGATCCAGTCTCTTGGTaGCATGAATATCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGDPVSW*HEYPQC
Trigger: ACACTGGGGATATTCATGCCACCAAGAGACTGGATC...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATGATATTCCCAACCTaGGTAGCTTCCGACACCTCC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYMIFPT*VASDTS
Trigger: GGAGGTGTCGGAAGCTACCCAGGTTGGGAATATCAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGGAAGCCGTTTCTCCTaGTCAGTATTGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYGSRFS*SVLRLC
Trigger: ACACAGCCTCAATACTGACCAGGAGAAACGGCTTCC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACAGGAATTGAATTTCTaGAGTCACATCCCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGQELNF*SHIPPG
Trigger: ACCCGGAGGGATGTGACTCCAGAAATTCAATTCCTG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGCCTTCGCCAAAGAATaGTGTAGTAAGTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMAFAKE*CSKYLG
Trigger: CCCCAGGTACTTACTACACCATTCTTTGGCGAAGGC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTGCATTTGCATTTCTTaGGCATGTGGATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNCICIS*ACGSLH
Trigger: GTGAAGTGATCCACATGCCCAAGAAATGCAAATGCA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATAAAGTTAGCTGGGTGTaGTGGTGCACCCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYKVSWV*WCTPVI
Trigger: GATTACAGGGGTGCACCACCACACCCAGCTAACTTT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR CAA 72 bp GTACCATATTTTCTAGTCTTATTGCCTAACAGTCACTaGGCAGGTGACAACAATACGCCAGCATTAACCAGG +
Preference number: 4 (lower is better)
Translates to: VPYFLVLLPNSH*AGDNNTPALTR
Trigger: CCTGGTTAATGCTGGCGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCAATAAGACTAGAAAATATGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGACTTGCCCCTTCGCCTaGCAAGATGTATTTGATGGA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMTCPFA*QDVFDG
Trigger: TCCATCAAATACATCTTGTCAGGCGAAGGGGCAAGT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGAGTCTCTTGGTGGCATaGATATCCCCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMSLLVA*ISPVFS
Trigger: TGAGAACACTGGGGATATTCATGCCACCAAGAGACT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGACAGTCCTCCATTTTaGCCAACCATATCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMDSPPF*PTISFA
Trigger: GGCAAAGGATATGGTTGGTCAAAATGGAGGACTGTC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGGAGGTGGATTATCGTTaGCATCAGTTAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMEVDYR*HQLGSQ
Trigger: CTGTGACCCTAACTGATGTCAACGATAATCCACCTC...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAATCCACTGTCCACAATaGAAATTGGCAGATAGTAAA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIIHCPQ*KLADSK
Trigger: TTTACTATCTGCCAATTTTCATTGTGGACAGTGGAT...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTATCCACTGTCCACAATaGAAATTGGCAGATAGTAAA +
Preference number: 4 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCIHCPQ*KLADSK
Trigger: TTTACTATCTGCCAATTTTCATTGTGGACAGTGGAT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATGGAATCTAAAGAGCTaGGTGATTCAGCAACTGAGC +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGWNLKS*VIQQLS
Trigger: GCTCAGTTGCTGAATCACTCAGCTCTTTAGATTCCA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTTCTCAGCACCTTGCTaGCTTAACAACTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGFSAPC*LNNSVI
Trigger: AATTACAGAGTTGTTAAGTCAGCAAGGTGCTGAGAA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTTTTGTGTTCATCAATaGGGCTGGGATCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGFCVHQ*GWDHLK
Trigger: CTTTAGATGATCCCAGCCTCATTGATGAACACAAAA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGTGTGTCAGGTCTTTTaGGGTACCAAGAATTGCGGA +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVVCQVF*GTKNCG
Trigger: TCCGCAATTCTTGGTACCTCAAAAGACCTGACACAC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGCCTGCCCAACATGGTaGAACTCAGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYACPTW*NSVSTK
Trigger: TTTAGTAGAGACTGAGTTTCACCATGTTGGGCAGGC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATTTTCTGGATAACCTaGCCCGGCTGGGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYIFWIT*PGWAFS
Trigger: TGAAAATGCCCAGCCGGGGCAGGTTATCCAGAAAAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATGTATTAGCTTTCATTaGCAACTTTCATACACCGTC +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCICISFH*QLSYTV
Trigger: GACGGTGTATGAAAGTTGGCAATGAAAGCTAATACA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAGAAAAAGTGTCAGAATaGAACGCACACTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGEKVSE*NAHCLS
Trigger: AGACAGGCAGTGTGCGTTGCATTCTGACACTTTTTC...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTTTATCTACTCTGGATaGCTGGAAGACCACTTAACT +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNFIYSG*LEDHLT
Trigger: AGTTAAGTGGTCTTCCAGGCATCCAGAGTAGATAAA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATCATCAAGAGTGCATTaGATTCAGGATGGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCISSRVH*IQDGFH
Trigger: ATGAAAACCATCCTGAATGCAATGCACTCTTGATGA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGATCCAGTCTCTTGGTaGCATGAATATCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYDPVSW*HEYPQC
Trigger: ACACTGGGGATATTCATGCCACCAAGAGACTGGATC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATAACTCCTGCCGTGTATaGGCCATCCAAAAATTTGGG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYNSCRV*AIQKFG
Trigger: CCCAAATTTTTGGATGGCCCATACACGGCAGGAGTT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGMTSKY*SLASLS
Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTCGAGGAAAGCGAGGTaGATTATCGTTGACATCAGT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFSRKAR*IIVDIS
Trigger: ACTGATGTCAACGATAATCCACCTCGCTTTCCTCGA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGTAATGATTCCTTCCTaGGTTTCTTTGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIVMIPS*VSLSTE
Trigger: TTCTGTTGACAAAGAAACCCAGGAAGGAATCATTAC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTGGTGTCCATTGGATaGCTCATCTTTATCCACAGC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLVSIG*LIFIHS
Trigger: GCTGTGGATAAAGATGAGCCATCCAATGGACACCAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGAGTACAAACTCTCTTaGCCAGTCCCATACATGTCC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVEYKLS*PVPYMS
Trigger: GGACATGTATGGGACTGGCCAAGAGAGTTTGTACTC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTCATGTAGCTCGGGCTaGAGAAAAATCAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFSCSSG*RKISMF
Trigger: GAACATGCTGATTTTTCTCCAGCCCGAGCTACATGA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCACTTTCATGGATCTTaGCTTGATGCAGGTACCTTG +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFHFHGS*LDAGTL
Trigger: CAAGGTACCTGCATCAAGCCAAGATCCATGAAAGTG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 72 bp ACACAGCAATATACTGAGGTCTCACATTCTCACGGCTaGTCTTCCTACACTTATTCCAATTCAGAGTACACT +
Preference number: 4 (lower is better)
Translates to: TQQYTEVSHSHG*SSYTYSNSEYT
Trigger: AGTGTACTCTGAATTGGAATAAGTGTAGGAAGACAAGCCGTGAGAATGTGAGACCTCAGTATATTGCTGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTTGAGAGTTCTGCTTaGCTCATCCCAGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLESSA*LIPEKH
Trigger: GTGTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATCTTGAGAGTTCTGCTTaGCTCATCCCAGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYLESSA*LIPEKH
Trigger: GTGTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAG...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTGTGTTTCTGTCAATTaGGTACCTCACAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFCVSVN*VPHRAI
Trigger: AATAGCCCTGTGAGGTACTCAATTGACAGAAACACA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTCTCCTGGTCAGTATTaGGGCTGTGTTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYSPGQY*GCVVFV
Trigger: AACAAAGACAACACAGCCTCAATACTGACCAGGAGA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTGGCAGATAGTAAACTaGTTGTTCCTGTCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYWQIVN*LFLSPE
Trigger: TTCCGGAGACAGGAACAATCAGTTTACTATCTGCCA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTCAATAACAAGTTTATaGATCTGCATAGCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGSITSL*ICIAGN
Trigger: GTTACCCGCTATGCAGATTCATAAACTTGTTATTGA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGACATGTGGTTATTGTaGCAGCTCTTTCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYDMWLL*QLFQSK
Trigger: CTTGCTCTGAAAGAGCTGTCACAATAACCACATGTC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATACCAACCATATCCTTTaGCTGAATGACAAGCAAATA +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNTNHIL*LNDKQI
Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAATCTGGGTCATGAGCTaGTACAGTGCCAATGATATT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGIWVMS*YSANDI
Trigger: AATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGAGGTTTGGTGCCTTTaGAGGTATATGAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVEVWCL*RYMRVA
Trigger: AGCAACTCTCATATACCTGCAAAGGCACCAAACCTC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACTCATAGAGGTTTGGTaGCTTTGCAGGTATATGAGA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGLIEVW*LCRYMR
Trigger: TCTCATATACCTGCAAAGGCACCAAACCTCTATGAG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCGAAACTTTACAAATGTaGAATTCTCCCTCAGTATGC +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGETLQM*NSPSVC
Trigger: GCATACTGAGGGAGAATTGCACATTTGTAAAGTTTC...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATTAGCTGCAGAAAATaGCAGAACTCCACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYISCRK*QNSTLP
Trigger: GGGCAAAGTGGAGTTCTGCCATTTTCTGCAGCTAAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGTCGAGGAAAGCGAGGTaGATTATCGTTGACATCAGT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMSRKAR*IIVDIS
Trigger: ACTGATGTCAACGATAATCCACCTCGCTTTCCTCGA...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTCTTCCTACTTGAGATaGATTCTGGCTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYSSYLR*ILALHC
Trigger: GCAATGGAGAGCCAGAATCCATCTCAAGTAGGAAGA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTGGTCTCATAGTCCATaGCAAATTCAGGGGCGTTAT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYWSHSP*QIQGRY
Trigger: ATAACGCCCCTGAATTTGCCATGGACTATGAGACCA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATGATGCTTTTAAAAGCTaGTCGACTCAGGAATTGAAT +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNDAFKS*STQELN
Trigger: ATTCAATTCCTGAGTCGACCAGCTTTTAAAAGCATC...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGACCATATCCTTTGCCTaGATGACAAGCAAATACTGG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMTISFA*MTSKYW
Trigger: CCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAAGATCCCAGATCTGGTaGTTGCTTGTAGAAAAATCA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGRSQIW*LLVEKS
Trigger: TGATTTTTCTACAAGCAATCACCAGATCTGGGATCT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAGCGAAACTGAGCTTCTaGCCTAGATTTTATAACCAC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVAKLSF*PRFYNH
Trigger: GTGGTTATAAAATCTAGGTCAGAAGCTCAGTTTCGC...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCATTAGCTCCAATATCTaGATCAGCAGCTTTAATTCT +
Preference number: 4 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGISSNI*ISSFNS
Trigger: AGAATTAAAGCTGCTGATGCAGATATTGGAGCTAAT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGATCTGGGTCATGAGCTaGTACAGTGCCAATGATATT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMIWVMS*YSANDI
Trigger: AATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAATTCTGGCTCTCCATTaGAAGGACTGTGATATTGTG +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVILALH*KDCDIV
Trigger: CACAATATCACAGTCCTTGCAATGGAGAGCCAGAAT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATTCTGGCTCTCCATTaGAAGGACTGTGATATTGTG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYILALH*KDCDIV
Trigger: CACAATATCACAGTCCTTGCAATGGAGAGCCAGAAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCTGCCTGTCTTGATTTaGTTGAAAAATTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFLPVLI*LKNFPQ
Trigger: CTGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATTGAGTCATCAAGAGTaGATTGCATTCAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGLSHQE*IAFRMV
Trigger: AACCATCCTGAATGCAATGCACTCTTGATGACTCAA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATCTCCTCTGTAGAGTaGTCTAAAGCAAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYISSVE*SKAKNW
Trigger: CCAGTTCTTTGCTTTAGAGCACTCTACAGAGGAGAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTAAAACTGGTGTCCATTaGATGGCTCATCTTTATCCA +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFKTGVH*MAHLYP
Trigger: TGGATAAAGATGAGCCATCCAATGGACACCAGTTTT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATAAAATGGGCATAATTTaGCAAACCCTGAGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNKMGII*QTLSFY
Trigger: ATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAATCAGCAGAGCTTCCTaGCAAATAAAGACATTTACC +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGISRAS*QIKTFT
Trigger: GGTAAATGTCTTTATTTGCCAGGAAGCTCTGCTGAT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 72 bp TACTTCAAATATACCACTGGAAAGTGTGGCCAACAATaGTATTACTTAGTGAGCAAAACACCATCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: YFKYTTGKCGQQ*YYLVSKTPSRP
Trigger: TGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCACACTTTCCAGTGGTATATTTGAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTATCCTTTGCCTGAATaGCAAGCAAATACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYYPLPE*QANTGL
Trigger: AAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATGTTGGCATCAATATTaGAGTATCTCTCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVCWHQY*SISPSL
Trigger: CAGACTTGGAGAGATACTTCAATATTGATGCCAACA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGTGTTGGCATCAATATTaGAGTATCTCTCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMCWHQY*SISPSL
Trigger: CAGACTTGGAGAGATACTTCAATATTGATGCCAACA...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAATGAGTTTAATACTATaGGGCAGTATGATGGACCTG +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVMSLIL*GSMMDL
Trigger: CAGGTCCATCATACTGCCTCATAGTATTAAACTCAT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAAGTGGAACTGTTTGTTaGCAGTTTAGCTTCATAAGA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSGTVC*QFSFIR
Trigger: TCTTATGAAGCTAAACTGTCAACAAACAGTTCCACT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGATAATAGGCAAGTCGTaGCATGTGGTTATTGTGACA +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMIIGKS*HVVIVT
Trigger: TGTCACAATAACCACATGTCACGACTTGCCTATTAT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAAGTCTAATGAAGATATaGCTCACCAAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVSLMKI*LTKAEI
Trigger: GATTTCTGCCTTGGTGAGGCATATCTTCATTAGACT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATCCCAAGTTTTGATATaGAACAAGTTCCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSQVLI*NKFQGF
Trigger: AAAACCCTGGAACTTGTTGCATATCAAAACTTGGGA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTAAACACATGATGACTTaGAATTGCCTTCCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFKHMMT*NCLPSF
Trigger: AAAGGAAGGAAGGCAATTGCAAGTCATCATGTGTTT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYMTSKY*SLASLS
Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATAAAACTGGTGTCCATTaGATGGCTCATCTTTATCCA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYKTGVH*MAHLYP
Trigger: TGGATAAAGATGAGCCATCCAATGGACACCAGTTTT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTTTCAGATTAAGGGCTTaGGTGTATTTCCTTGACATA +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFFRLRA*VYFLDI
Trigger: TATGTCAAGGAAATACACCCAAGCCCTTAATCTGAA...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTATGGCAACTTCAGTaGAACTGTTTGTTGACAGTT +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLWQLQ*NCLLTV
Trigger: AACTGTCAACAAACAGTTCCACTGAAGTTGCCATAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
3UTR CAA 72 bp GTCAGAATGCAACGCACACTGCCTGTCTTGATTTGCTaGAAAAATTTCCCACAGAATTATACGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: VRMQRTLPVLIC*KNFPQNYTLQC
Trigger: ACATTGTAACGTATAATTCTGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAGTGTGCGTTGCATTCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR TCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACACAAAATTAGAACATaGAGCTGTAGGGTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVHKIRT*SCRVVN
Trigger: ATTCACTACCCTACAGCTTCATGTTCTAATTTTGTG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATACCAACCATATCCTTTaGCTGAATGACAAGCAAATA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYTNHIL*LNDKQI
Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR GCA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAAACACTATTTGCATTTaGATTTCTTGGGCATGTGGA +
Preference number: 4 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVNTICI*ISWACG
Trigger: TCCACATGCCCAAGAAATGCAAATGCAAATAGTGTT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGTGTGTGTGTGTGTTTaGATAAGTTACAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFVCVCV*ISYSYS
Trigger: AGAATAACTGTAACTTATGCAAACACACACACACAC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATCACAAGTTCCTTCTTaGACAGTGTCTAATATAGTA +
Preference number: 4 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSQVPS*TVSNIV
Trigger: TACTATATTAGACACTGTGCAAGAAGGAACTTGTGA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGTAATGATTCCTTCCTaGGTTTCTTTGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYVMIPS*VSLSTE
Trigger: TTCTGTTGACAAAGAAACCCAGGAAGGAATCATTAC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CCA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGCTTCAAATATACCACTaGAAAGTGTGGCCAACAATT +
Preference number: 4 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMLQIYH*KVWPTI
Trigger: AATTGTTGGCCACACTTTCCAGTGGTATATTTGAAG...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
3UTR CAA 72 bp CATGTTTCTGATAATTACCTGAATTATCTGAAGTTCTaGGAGATTTCTATGAACCATCTCCTTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: HVSDNYLNYLKF*EISMNHLLHGG
Trigger: CCCACCATGAAGGAGATGGTTCATAGAAATCTCCAAGAACTTCAGATAATTCAGGTAATTATCAGAAACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR GCA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATTAGCTCCAATATCTaGATCAGCAGCTTTAATTCT +
Preference number: 4 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYISSNI*ISSFNS
Trigger: AGAATTAAAGCTGCTGATGCAGATATTGGAGCTAAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS CCA 90 bp GCGCGCCGGAGCCGGGGCCGAAGAGGGAGGGGAAGAGGGCGACGATaGTGGGCGGCGGGCGCCTGCTGTCAGCGCTGTCGGAGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: ARRSRGRRGRGRGRR*WAAGACCQRCRRPA
Trigger: GGCCGGCCTCCGACAGCGCTGACAGCAGGCGCCCGCCGCCCACCATCGTCGCCCTCTTCCCCTCCCTCTTCGGCCCCGGCTCCGGCGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS GCA 90 bp GGCTCCTCCTCCAATCACAGCCCACTCCGCGGTGCGCGGGGACCCTaGCCCGGCCTCGGGCGCCGGGGGCCCGCTGCGTCTGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: GSSSNHSPLRGARGP*PGLGRRGPAASAHC
Trigger: GCAGTGAGCAGACGCAGCGGGCCCCCGGCGCCCGAGGCCGGGGCAGGGTCCCCGCGCACCGCGGAGTGGGCTGTGATTGGAGGAGGAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS GCA 90 bp CGCCAGGGACCCGGGCGTGTGCATCCGAAAGAACGTGCGCTCGGCTaGCGGACGCCCGCGGGCTCTTGGGGACCCAGTGCGCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RQGPGRVHPKERALG*RTPAGSWGPSARSS
Trigger: GGAGCTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS GCA 90 bp CTCGCTGCCCTCCCCACGGCGTCAGACGCCAGGGACCCGGGCGTGTaGATCCGAAAGAACGTGCGCTCGGCTGCCGGACGCCCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: LAALPTASDARDPGV*IRKNVRSAAGRPRA
Trigger: AGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCTGGCGTCTGACGCCGTGGGGAGGGCAGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGACGCCCGCGGGCTCTaGGGGACCCAGTGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIDARGL*GTQCAQ
Trigger: CTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGTC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGACGCCCGCGGGCTCTaGGGGACCCAGTGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYDARGL*GTQCAQ
Trigger: CTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGTC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTCGGGCTCCACGGGTTaGTTGGTGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLSGSTG*LVSLSS
Trigger: GCTGGATAGGCTCACCAACAAACCCGTGGAGCCCGA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGGCTCCACGGGTTTGTaGGTGAGCCTATCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCGSTGL*VSLSSA
Trigger: AGCGCTGGATAGGCTCACCAACAAACCCGTGGAGCC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS CCA 90 bp TGCGCTTGGTCCGGGACCTCCCTGATTGGAAATAGGGCTTTGATCTaGACCTTGAGAGTTCTGCTTGACTCATCCCAGAAAAACACAGGA +
Preference number: 5 (lower is better)
Translates to: CAWSGTSLIGNRALI*TLRVLLDSSQKNTG
Trigger: TCCTGTGTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAATCAGGGAGGTCCCGGACCAAGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCACACCCAGCTGCGCTaGGTCCGGGACCTCCCTGAT +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFHTQLR*VRDLPD
Trigger: ATCAGGGAGGTCCCGGACCAAGCGCAGCTGGGTGTG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGAGCCTATCCAGCGCTaGAGCTCGGAGCGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIEPIQR*SSERVV
Trigger: TACTACACGCTCCGAGCTCAAGCGCTGGATAGGCTC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCGGCTCCACGGGTTTGTaGGTGAGCCTATCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGGSTGL*VSLSSA
Trigger: AGCGCTGGATAGGCTCACCAACAAACCCGTGGAGCC...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCAGCTACTCCGGAGGTaGAGGCAGGAGAACGGTGTG +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGQLLRR*RQENGV
Trigger: CACACCGTTCTCCTGCCTCAACCTCCGGAGTAGCTG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGACTGTGTTTCTGTCAATaGAGTACCTCACAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRLCFCQ*STSQGY
Trigger: ATAGCCCTGTGAGGTACTCAATTGACAGAAACACAG...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCACATCCCTCCGGGTCTaGGTGTCTCGGATGACGTTG +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGTSLRV*VSRMTL
Trigger: CAACGTCATCCGAGACACCAAGACCCGGAGGGATGT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAATTGCCTTCCTTCCTTaGGCACATCTAAACCACACA +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRIAFLP*AHLNHT
Trigger: TGTGTGGTTTAGATGTGCCAAAGGAAGGAAGGCAAT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAGTCTCTTTCCTGATTTaGTTCCTTAGCTGGCTGATC +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRVSFLI*FLSWLI
Trigger: GATCAGCCAGCTAAGGAACAAAATCAGGAAAGAGAC...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTTTGGAAGGGCAGTCTaGATGACTCCTGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLFGRAV*MTPVFG
Trigger: GCCAAAGACAGGAGTCATCAAGACTGCCCTTCCAAA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATGTGTCTCGGATGACGTaGAGGTTTCTCAGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNVSRMT*RFLSAA
Trigger: GGCTGCACTGAGAAACCTCAACGTCATCCGAGACAC...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAAACCCTGAGTTTCTATaGATGCTCCTGTATGGACAA +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRNPEFL*MLLYGQ
Trigger: TTGTCCATACAGGAGCATCAATAGAAACTCAGGGTT...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGAGGTGTGCCACACATTTaGATGAGTGCACATAGTTTA +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRGVPHI*MSAHSL
Trigger: TAAACTATGTGCACTCATCAAAATGTGTGGCACACC...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTCGGGCTCCACGGGTTaGTTGGTGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYSGSTG*LVSLSS
Trigger: GCTGGATAGGCTCACCAACAAACCCGTGGAGCCCGA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTTTGGAAGGGCAGTCTaGATGACTCCTGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCFGRAV*MTPVFG
Trigger: GCCAAAGACAGGAGTCATCAAGACTGCCCTTCCAAA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATCACCATCCACAATCTaGTACTCCATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRSPSTI*YSISAL
Trigger: TAATGCTGAAATGGAGTACAAGATTGTGGATGGTGA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTCTCGATCCAAAGACTaGGCAGTTGTGATGACCCCA +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCSRSKD*AVVMTP
Trigger: TGGGGTCATCACAACTGCCAAGTCTTTGGATCGAGA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATTCTTGAAATCGTCTTaGGAGCATGTAGAACTCATG +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRFLKSS*EHVELM
Trigger: CATGAGTTCTACATGCTCCAAAGACGATTTCAAGAA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACTTGATGCAGGTACCTaGCTGCCTTCCACGAGCCCA +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGLDAGT*LPSTSP
Trigger: TGGGCTCGTGGAAGGCAGCAAGGTACCTGCATCAAG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS TCA 90 bp ATGACATTATCTGGGATGCTTTTAAAAGCTGGTCGACTCAGGAATTaGATTTCTGGAGTCACATCCCTCCGGGTCTTGGTGTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: MTLSGMLLKAGRLRN*ISGVTSLRVLVSRM
Trigger: CATCCGAGACACCAAGACCCGGAGGGATGTGACTCCAGAAATTCAATTCCTGAGTCGACCAGCTTTTAAAAGCATCCCAGATAATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGAGCCTATCCAGCGCTaGAGCTCGGAGCGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYEPIQR*SSERVV
Trigger: TACTACACGCTCCGAGCTCAAGCGCTGGATAGGCTC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCGAGGTGGATTATCGTaGACATCAGTTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCRGGLS*TSVRVT
Trigger: TGTGACCCTAACTGATGTCAACGATAATCCACCTCG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATGGTCGGCATCTTTATTaGCAGCTTCTATCCGTAGCG +
Preference number: 5 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNGRHLY*QLLSVA
Trigger: CGCTACGGATAGAAGCTGCAAATAAAGATGCCGACC...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTCTCGATCCAAAGACTaGGCAGTTGTGATGACCCCA +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGSRSKD*AVVMTP
Trigger: TGGGGTCATCACAACTGCCAAGTCTTTGGATCGAGA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp GTTGTCAGGAGGTATAAGCTGGAAACCAGGATGGCGCCACCATCACAGCTGAGATATTTTCTAGTCTTATaGCCTAACAGTCACTTGGCA +
Preference number: 5 (lower is better)
Translates to: VVRRYKLETRMAPPSQLRYFLVL*PNSHLA
Trigger: TGCCAAGTGACTGTTAGGCAATAAGACTAGAAAATA...TCTCAGCTGTGATGGTGGCGCCATCCTGGTTTCCAGCTTATACCTCCTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCGAAAAGGTGGAAGGGTaGTTGGGATTTTTCTCCTAC +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLEKVEG*LGFFSY
Trigger: GTAGGAGAAAAATCCCAACAACCCTTCCACCTTTTC...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTTCATGGATCTTGGCTaGATGCAGGTACCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNFMDLG*MQVPCC
Trigger: GCAGCAAGGTACCTGCATCAAGCCAAGATCCATGAA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCATAATCTGTAGAGTGTaGGATTGGAAGAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLIICRV*DWKRSP
Trigger: TGGTGACCTCTTCCAATCCAACACTCTACAGATTAT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCTCTGGGACGTTATATaGATAAGACCTTCGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLWDVI*IRPSRK
Trigger: TTTCCTCGAAGGTCTTATCAATATAACGTCCCAGAG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTCCGTAGCGTGTAACTaGTTTTGGCTTCAAAATCCA +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLSVACN*FWLQNP
Trigger: TGGATTTTGAAGCCAAAACAAGTTACACGCTACGGA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCTGTGTTTCTGTCAATaGAGTACCTCACAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCLCFCQ*STSQGY
Trigger: ATAGCCCTGTGAGGTACTCAATTGACAGAAACACAG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTCACTGTACCTGGAGTaGGGAAGAGATATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLSLYLE*GRDMKN
Trigger: ATTCTTCATATCTCTTCCCAACTCCAGGTACAGTGA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTTGCCTAACAGTCACTaGGCAGGTGACAACAATACG +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGLPNSH*AGDNNT
Trigger: CGTATTGTTGTCACCTGCCAAGTGACTGTTAGGCAA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATACATTTCGCCTCAAATaGTGTGTGTTCCTGCACACG +
Preference number: 5 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNTFRLK*CVFLHT
Trigger: CGTGTGCAGGAACACACACAATTTGAGGCGAAATGT...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCTCCGTATTTTATCCTaGTCCCTTATGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLRILS*SLMFLQ
Trigger: CTGCAAGAACATAAGGGACAAGGATAAAATACGGAG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCTCTGGGACGTTATATaGATAAGACCTTCGAGGAAA +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCLWDVI*IRPSRK
Trigger: TTTCCTCGAAGGTCTTATCAATATAACGTCCCAGAG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCCTGTTGGCATCAATATaGAAGTATCTCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLLLASI*KYLSKS
Trigger: AGACTTGGAGAGATACTTCAATATTGATGCCAACAG...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTGTGATGACCCCACTGTaGGCATCAATATTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCVMTPL*ASILKY
Trigger: ATACTTCAATATTGATGCCAACAGTGGGGTCATCAC...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATATCAGGGGCGTTATCATaGATGTCAAGTATAGTGATG +
Preference number: 5 (lower is better)
Translates to: LMLNDELMGAAHQHGTCISGALS*MSSIVM
Trigger: CATCACTATACTTGACATCAATGATAACGCCCCTGA...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTCAGGGGCGTTATCATaGATGTCAAGTATAGTGATG +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCSGALS*MSSIVM
Trigger: CATCACTATACTTGACATCAATGATAACGCCCCTGA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CTCAGAAAATCTGGTCTGCCGTGTTTTTGTGCTCTCGTCCATTCTCACAACAATTTCTCCTGGTCAGTATaGAGGCTGTGTTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LRKSGLPCFCALVHSHNNFSWSV*RLCCLC
Trigger: ACAAAGACAACACAGCCTCAATACTGACCAGGAGAA...ATTGTTGTGAGAATGGACGAGAGCACAAAAACACGGCAGACCAGATTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCTGGTCGACTCAGGAATaGAATTTCTGGAGTCACATC +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGWSTQE*NFWSHI
Trigger: GATGTGACTCCAGAAATTCAATTCCTGAGTCGACCA...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCAGCAAGGGGAGTTCTaGTTTTCTGTATGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGQQGEF*FSVCSG
Trigger: ACCACTACATACAGAAAACAAGAACTCCCCTTGCTG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCATTTTCTGTACCGAGTaGTCAGGAGGTATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGIFCTE*SGGISW
Trigger: CCAGCTTATACCTCCTGACAACTCGGTACAGAAAAT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTACCCAGTGTCCACATaGGACATCTCCCAATTTTTA +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCYPVST*DISQFL
Trigger: TAAAAATTGGGAGATGTCCAATGTGGACACTGGGTA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCATTGGAAATAGGGCTTaGATCTGGACCTTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGIGNRA*IWTLRV
Trigger: AACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAAT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTTCACCATCCACAATCTaGTACTCCATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCSPSTI*YSISAL
Trigger: TAATGCTGAAATGGAGTACAAGATTGTGGATGGTGA...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGGTCGGCATCTTTATTaGCAGCTTCTATCCGTAGCG +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYGRHLY*QLLSVA
Trigger: CGCTACGGATAGAAGCTGCAAATAAAGATGCCGACC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTCTGTTGGCATCAATATaGAAGTATCTCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCLLASI*KYLSKS
Trigger: AGACTTGGAGAGATACTTCAATATTGATGCCAACAG...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCGTGATGACCCCACTGTaGGCATCAATATTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGVMTPL*ASILKY
Trigger: ATACTTCAATATTGATGCCAACAGTGGGGTCATCAC...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAATAGCCTCTTCCTACTaGAGATGGATTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGIASSY*RWILAL
Trigger: GAGAGCCAGAATCCATCTCAAGTAGGAAGAGGCTAT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCAATTTGTCCCAAGTTTaGATATGCAACAAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLNLSQV*ICNKFQ
Trigger: CTGGAACTTGTTGCATATCAAAACTTGGGACAAATT...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACATGATGACTTGCAATaGCCTTCCTTCCTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGHDDLQ*PSFLWH
Trigger: GTGCCAAAGGAAGGAAGGCAATTGCAAGTCATCATG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCGCACACTGCCTGTCTaGATTTGCTTGAAAAATTTC +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGRTLPV*ICLKNF
Trigger: GAAATTTTTCAAGCAAATCAAGACAGGCAGTGTGCG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCCTCAGAGGGCAGAGTGAAAAGGCAGCTACCATTACTTAACCACTACTACCTCTGTGTGTGTGTGTGTTaGCATAAGTTACAGTTATTC +
Preference number: 5 (lower is better)
Translates to: SSEGRVKRQLPLLNHYYLCVCVC*HKLQLF
Trigger: GAATAACTGTAACTTATGCAAACACACACACACACA...GAGGTAGTAGTGGTTAAGTAATGGTAGCTGCCTTTTCACTCTGCCCTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATGGTCTGCCGTGTTTTaGTGCTCTCGTCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVWSAVF*CSRPFS
Trigger: TGAGAATGGACGAGAGCACAAAAACACGGCAGACCA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTAAGGTGGAAGGGTTGTaGGGATTTTTCTCCTACCCT +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFKVEGL*GFFSYP
Trigger: AGGGTAGGAGAAAAATCCCAACAACCCTTCCACCTT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS TCA 90 bp ATATCTGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTaGCATGTGGTTATTGTGACAGCTCTTTCAGAGCAAGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: ISAYVHQMEKIIGKS*HVVIVTALSEQALE
Trigger: TTCCAGGGCTTGCTCTGAAAGAGCTGTCACAATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCCTGACAAGATGTATTaGATGGAACCATCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGPDKMY*MEPSPL
Trigger: TAAAGGAGATGGTTCCATCAAATACATCTTGTCAGG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACGAGGTGGATTATCGTaGACATCAGTTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVRGGLS*TSVRVT
Trigger: TGTGACCCTAACTGATGTCAACGATAATCCACCTCG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGATAGCCTCTTCCTACTaGAGATGGATTCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMIASSY*RWILAL
Trigger: GAGAGCCAGAATCCATCTCAAGTAGGAAGAGGCTAT...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTAAAAGTTGTGGTTATTaGTTGCATCCGTTGTTAAGC +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCKSCGY*LHPLLS
Trigger: GCTTAACAACGGATGCAACAAATAACCACAACTTTT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CTAATGCTAAATGACGAGTTAATGGGTGCCGCACACCAGCATGGCACATGTATAGAGGCTGTGTTGTCTTaGTTATCTTTCAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: LMLNDELMGAAHQHGTCIEAVLS*LSFNEK
Trigger: CTTTTCATTGAAAGATAACAAAGACAACACAGCCTC...TATACATGTGCCATGCTGGTGTGCGGCACCCATTAACTCGTCATTTAGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAAGAGGTTTGGTGCCTTaGCAGGTATATGAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVRGLVP*QVYESC
Trigger: GCAACTCTCATATACCTGCAAAGGCACCAAACCTCT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGATCACATTCTCACGGCTaGTCTTCCTACACTTATTCC +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGSHSHG*SSYTYS
Trigger: GGAATAAGTGTAGGAAGACAAGCCGTGAGAATGTGA...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGGCCAACAATTGTATTACTTAGTGAGCAAAACACCATCCAGGCCAGGAGCTGTATGTTTACTCTGTTCTaGTTGTGTTCGTGTTACAAG +
Preference number: 5 (lower is better)
Translates to: WPTIVLLSEQNTIQARSCMFTLF*LCSCYK
Trigger: CTTGTAACACGAACACAACAAGAACAGAGTAAACAT...ACAGCTCCTGGCCTGGATGGTGTTTTGCTCACTAAGTAATACAATTGTTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTGGGCCATCCAAAAATTaGGGTTCATTGTCGTTGATA +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFGPSKN*GSLSLI
Trigger: TATCAACGACAATGAACCCAAATTTTTGGATGGCCC...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCCCTTCCTGGGTTTCTTaGTCAACAGAAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGPSWVS*STEILK
Trigger: TTTTAAGATTTCTGTTGACAAAGAAACCCAGGAAGG...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTTCTCCTGGTCAGTATaGAGGCTGTGTTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYFSWSV*RLCCLC
Trigger: ACAAAGACAACACAGCCTCAATACTGACCAGGAGAA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACTTTCTCATAGAGGTTaGGTGCCTTTGCAGGTATAT +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGLSHRG*VPLQVY
Trigger: ATATACCTGCAAAGGCACCAAACCTCTATGAGAAAG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCACTTCATTTCTAAAGTaGGGCTGCAAGTTTACAGAA +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGTSFLK*GCKFTE
Trigger: TTCTGTAAACTTGCAGCCCAACTTTAGAAATGAAGT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGTGGTCAGTGCAGTCCTTTAGATAAGTCTAATGAAGATATGCCTCACCAAGGCAATATCATTCCTACATaGTGTAACTATGCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: CGQCSPLDKSNEDMPHQGNIIPT*CNYAVD
Trigger: GTCAACGGCATAGTTACACAATGTAGGAATGATATT...GCCTTGGTGAGGCATATCTTCATTAGACTTATCTAAAGGACTGCACTGACCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATCATATATATTTCACTaGCCTCCAGGCATCGTGGAC +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVSYIFH*PPGIVD
Trigger: GTCCACGATGCCTGGAGGCAAGTGAAATATATATGA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATAATCTGTAGAGTGTaGGATTGGAAGAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYIICRV*DWKRSP
Trigger: TGGTGACCTCTTCCAATCCAACACTCTACAGATTAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATATTGGAAATAGGGCTTaGATCTGGACCTTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYIGNRA*IWTLRV
Trigger: AACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAAT...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGGGCCATCCAAAAATTaGGGTTCATTGTCGTTGATA +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYGPSKN*GSLSLI
Trigger: TATCAACGACAATGAACCCAAATTTTTGGATGGCCC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATTCCGTAGCGTGTAACTaGTTTTGGCTTCAAAATCCA +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYSVACN*FWLQNP
Trigger: TGGATTTTGAAGCCAAAACAAGTTACACGCTACGGA...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGACACACTCTGATTTTATaGAACTGGGTAAATACGCGT +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGHTLIL*NWVNTR
Trigger: ACGCGTATTTACCCAGTTCAATAAAATCAGAGTGTG...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCAAAATGGGCATAATTaGGCAAACCCTGAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFQNGHN*ANPEFL
Trigger: TAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTACTGCCTGTCTTGATTaGCTTGAAAAATTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFTACLD*LEKFPT
Trigger: TGTGGGAAATTTTTCAAGCAAATCAAGACAGGCAGT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTCTATTCTGGTGTTTaGTGTTCATCAATGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLYSGV*CSSMRL
Trigger: CAGCCTCATTGATGAACACAAAACACCAGAATAGAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp ATAAACCCATTACCCAGTGTCCACATTGGACATCTCCCAATTTTTAAAAGGATGCCTGACAAGATGTATTaGATGGAACCATCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: INPLPSVHIGHLPIFKRMPDKMY*MEPSPL
Trigger: TAAAGGAGATGGTTCCATCAAATACATCTTGTCAGG...CATCCTTTTAAAAATTGGGAGATGTCCAATGTGGACACTGGGTAATGGGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTAACTATTTCATCTTCTaGCAGACAACAAGGGGATTA +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFNYFIF*QTTRGL
Trigger: TAATCCCCTTGTTGTCTGCAAGAAGATGAAATAGTT...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TCACAGCTGAGAATGATGACAACAGAAGTCTTCATTGTAGTGTGTCAGGTCTTTCAACAATCAGCAGTTTaGACATCATCCAAATGTACT +
Preference number: 5 (lower is better)
Translates to: SQLRMMTTEVFIVVCQVFQQSAV*TSSKCT
Trigger: AGTACATTTGGATGATGTCAAAACTGCTGATTGTTG...AAAGACCTGACACACTACAATGAAGACTTCTGTTGTCATCATTCTCAGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTACTTAGCTGGCTGATCTaGGAATATTTCTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVLSWLI*EYFFQR
Trigger: TCTCTGAAAGAAATATTCCAAGATCAGCCAGCTAAG...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp CAAAATGGGCATAATTTGGCAAACCCTGAGTTTCTATTGATGCTCCTGTATGGAATTTTTCTCCTACCCTaGTGTGCCAACTATTCAATA +
Preference number: 5 (lower is better)
Translates to: QNGHNLANPEFLLMLLYGIFLLP*CANYSI
Trigger: TATTGAATAGTTGGCACACAAGGGTAGGAGAAAAAT...TCCATACAGGAGCATCAATAGAAACTCAGGGTTTGCCAAATTATGCCCATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATCCTTCCTGGGTTTCTTaGTCAACAGAAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYPSWVS*STEILK
Trigger: TTTTAAGATTTCTGTTGACAAAGAAACCCAGGAAGG...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTAAAAAGTTGTGGTTATTaGTTGCATCCGTTGTTAAGC +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVKSCGY*LHPLLS
Trigger: GCTTAACAACGGATGCAACAAATAACCACAACTTTT...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS-3UTR CAA 90 bp TGCATATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTGACATGTGGTTATGAGGCTGTGTTGTCTTaGTTATCTTTCAATGAAAAG +
Preference number: 5 (lower is better)
Translates to: CICSPNGEDNRQVVTCGYEAVLS*LSFNEK
Trigger: CTTTTCATTGAAAGATAACAAAGACAACACAGCCTC...ATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS-3UTR CAA 90 bp TTTACTTTACTTCAACATTTCGCCTCAAATTGTGTGTGTTCCTGCACACGTGTATTTTACTCAATAGGTTaGCAGCAAGAAAGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: FTLLQHFASNCVCSCTRVFYSIG*QQERLC
Trigger: ACACAACCTTTCTTGCTGCAAACCTATTGAGTAAAA...TACACGTGTGCAGGAACACACACAATTTGAGGCGAAATGTTGAAGTAAAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397968.4
CDS GCA 72 bp TCCAATCACAGCCCACTCCGCGGTGCGCGGGGACCCTaGCCCGGCCTCGGGCGCCGGGGGCCCGCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: SNHSPLRGARGP*PGLGRRGPAAS
Trigger: AGACGCAGCGGGCCCCCGGCGCCCGAGGCCGGGGCAGGGTCCCCGCGCACCGCGGAGTGGGCTGTGATTGGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS GCA 72 bp CACGGGCTCCTCCTCCAATCACAGCCCACTCCGCGGTaGGCGGGGACCCTGCCCCGGCCTCGGGCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: HGLLLQSQPTPR*AGTLPRPRAPG
Trigger: CCCCGGCGCCCGAGGCCGGGGCAGGGTCCCCGCGCACCGCGGAGTGGGCTGTGATTGGAGGAGGAGCCCGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS CCA 72 bp GAACGTGCGCTCGGCTGCCGGACGCCCGCGGGCTCTTaGGGACCCAGTGCGCGCAGCTCCGCGCGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: ERALGCRTPAGS*GPSARSSARGA
Trigger: TGCCCCGCGCGCGGAGCTGCGCGCACTGGGTCCCCAAGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp AGGGGAAGAGGGCGACGATGGTGGGCGGCGGGCGCCTaGTGTCAGCGCTGTCGGAGGCCGGCCCAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: RGRGRRWWAAGA*CQRCRRPAQGA
Trigger: GGCTCCCTGGGCCGGCCTCCGACAGCGCTGACAGCAGGCGCCCGCCGCCCACCATCGTCGCCCTCTTCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536984.6
CDS GCA 72 bp CCCGGGCGTGTGCATCCGAAAGAACGTGCGCTCGGCTaGCGGACGCCCGCGGGCTCTTGGGGACCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: PGRVHPKERALG*RTPAGSWGPSA
Trigger: CGCACTGGGTCCCCAAGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp ACGCCAGGGACCCGGGCGTGTGCATCCGAAAGAACGTaGGCTCGGCTGCCGGACGCCCGCGGGCTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: TPGTRACASERT*ARLPDARGLLG
Trigger: CCCCAAGAGCCCGCGGGCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCTGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp CTCCCCACGGCGTCAGACGCCAGGGACCCGGGCGTGTaGATCCGAAAGAACGTGCGCTCGGCTGCCGGACGC +
Preference number: 6 (lower is better)
Translates to: LPTASDARDPGV*IRKNVRSAAGR
Trigger: GCGTCCGGCAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCTGGCGTCTGACGCCGTGGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp GGGCTCCACGGGTTTGTTGGTGAGCCTATCCAGCGCTaGAGCTCGGAGCGTGTAGTAGGCCTGCTCCTCACG +
Preference number: 6 (lower is better)
Translates to: GLHGFVGEPIQR*SSERVVGLLLT
Trigger: CGTGAGGAGCAGGCCTACTACACGCTCCGAGCTCAAGCGCTGGATAGGCTCACCAACAAACCCGTGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp GAGAAAAGGCACAGTTCCAGTTGGCTTAGTAGCTCTTaGCTCCGGCAGGGTGTCAGCTGGGAGTCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: EKRHSSSWLSSS*LRQGVSWESRD
Trigger: ATCTCTGGACTCCCAGCTGACACCCTGCCGGAGGCAAGAGCTACTAAGCCAACTGGAACTGTGCCTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp GGTCTTGGTGTCTCGGATGACGTTGAGGTTTCTCAGTaGAGCCATGTCAAACGCTTCCGTGTCCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: GLGVSDDVEVSQ*SHVKRFRVLLS
Trigger: GGAGAGGAGGACACGGAAGCGTTTGACATGGCTGCACTGAGAAACCTCAACGTCATCCGAGACACCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS CAA 72 bp GTCACATCCCTCCGGGTCTTGGTGTCTCGGATGACGTaGAGGTTTCTCAGTGCAGCCATGTCAAACGCTTCC +
Preference number: 6 (lower is better)
Translates to: VTSLRVLVSRMT*RFLSAAMSNAS
Trigger: GGAAGCGTTTGACATGGCTGCACTGAGAAACCTCAACGTCATCCGAGACACCAAGACCCGGAGGGATGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS CAA 90 bp ATTTCTGGAGTCACATCCCTCCGGGTCTTGGTGTCTCGGATGACGTaGAGGTTTCTCAGTGCAGCCATGTCAAACGCTTCCGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISGVTSLRVLVSRMT*RFLSAAMSNASVSS
Trigger: GGAGGACACGGAAGCGTTTGACATGGCTGCACTGAGAAACCTCAACGTCATCCGAGACACCAAGACCCGGAGGGATGTGACTCCAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS CAA 90 bp CCCAGCTGCGCTTGGTCCGGGACCTCCCTGATTGGAAATAGGGCTTaGATCTGGACCTTGAGAGTTCTGCTTGACTCATCCCAGAAAAAC +
Preference number: 6 (lower is better)
Translates to: PSCAWSGTSLIGNRA*IWTLRVLLDSSQKN
Trigger: GTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAATCAGGGAGGTCCCGGACCAAGCGCAGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp GCTTGGTCCGGGACCTCCCTGATTGGAAATAGGGCTTaGATCTGGACCTTGAGAGTTCTGCTTGACTCATCC +
Preference number: 6 (lower is better)
Translates to: AWSGTSLIGNRA*IWTLRVLLDSS
Trigger: GGATGAGTCAAGCAGAACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAATCAGGGAGGTCCCGGACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp GTCACGGTCCATTTTCTTAGAGGCAGAGTGGCCCAATaGGAAGGTCAATGCAAAGAAGCCCCAGGTATGGCT +
Preference number: 6 (lower is better)
Translates to: VTVHFLRGRVAQ*EGQCKEAPGMA
Trigger: AGCCATACCTGGGGCTTCTTTGCATTGACCTTCCAATTGGGCCACTCTGCCTCTAAGAAAATGGACCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS TCA 72 bp CATCTTCCACAATTATCTTCACAGTTGTCGTGTCACTaGACGGACCCAAGCTCAGAAAGCGAGGGTCGGCAT +
Preference number: 6 (lower is better)
Translates to: HLPQLSSQLSCH*TDPSSESEGRH
Trigger: ATGCCGACCCTCGCTTTCTGAGCTTGGGTCCGTTCAGTGACACGACAACTGTGAAGATAATTGTGGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CCA 72 bp TCACGGTCCATTTTCTTAGAGGCAGAGTGGCCCAATTaGAAGGTCAATGCAAAGAAGCCCCAGGTATGGCTA +
Preference number: 6 (lower is better)
Translates to: SRSIFLEAEWPN*KVNAKKPQVWL
Trigger: TAGCCATACCTGGGGCTTCTTTGCATTGACCTTCCAATTGGGCCACTCTGCCTCTAAGAAAATGGACCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS CAA 90 bp TGGTCCGGGACCTCCCTGATTGGAAATAGGGCTTTGATCTGGACCTaGAGAGTTCTGCTTGACTCATCCCAGAAAAACACAGGAAAAGAG +
Preference number: 6 (lower is better)
Translates to: WSGTSLIGNRALIWT*RVLLDSSQKNTGKE
Trigger: CTCTTTTCCTGTGTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAATCAGGGAGGTCCCGGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS GCA 72 bp TTTCTTAGAGGCAGAGTGGCCCAATTGGAAGGTCAATaGAAAGAAGCCCCAGGTATGGCTACTGAATCTCCA +
Preference number: 6 (lower is better)
Translates to: FLRGRVAQLEGQ*KEAPGMATESP
Trigger: TGGAGATTCAGTAGCCATACCTGGGGCTTCTTTGCATTGACCTTCCAATTGGGCCACTCTGCCTCTAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS CCA 72 bp GCTTTTAAAAGCTGGTCGACTCAGGAATTGAATTTCTaGAGTCACATCCCTCCGGGTCTTGGTGTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: AFKSWSTQELNF*SHIPPGLGVSD
Trigger: ATCCGAGACACCAAGACCCGGAGGGATGTGACTCCAGAAATTCAATTCCTGAGTCGACCAGCTTTTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS CAA 90 bp GATGACATTATCTGGGATGCTTTTAAAAGCTGGTCGACTCAGGAATaGAATTTCTGGAGTCACATCCCTCCGGGTCTTGGTGTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: DDIIWDAFKSWSTQE*NFWSHIPPGLGVSD
Trigger: ATCCGAGACACCAAGACCCGGAGGGATGTGACTCCAGAAATTCAATTCCTGAGTCGACCAGCTTTTAAAAGCATCCCAGATAATGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS GCA 72 bp GGTATGGCTACTGAATCTCCATTCTGCTCCATGTTGTaGTGTCTTGATGGTGCTTGGGTCCCAGTTTATTCA +
Preference number: 6 (lower is better)
Translates to: GMATESPFCSML*CLDGAWVPVYS
Trigger: TGAATAAACTGGGACCCAAGCACCATCAAGACAGCACAACATGGAGCAGAATGGAGATTCAGTAGCCATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS CCA 72 bp GGGAGTCCAGAGATAATAATCTGTAGAGTGTTGGATTaGAAGAGGTCACCACTGCTGAATAGCCTTCGCCAA +
Preference number: 6 (lower is better)
Translates to: GSPEIIICRVLD*KRSPLLNSLRQ
Trigger: TTGGCGAAGGCTATTCAGCAGTGGTGACCTCTTCCAATCCAACACTCTACAGATTATTATCTCTGGACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp ATCTGGGATGCTTTTAAAAGCTGGTCGACTCAGGAATaGAATTTCTGGAGTCACATCCCTCCGGGTCTTGGT +
Preference number: 6 (lower is better)
Translates to: IWDAFKSWSTQE*NFWSHIPPGLG
Trigger: ACCAAGACCCGGAGGGATGTGACTCCAGAAATTCAATTCCTGAGTCGACCAGCTTTTAAAAGCATCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS TCA 72 bp TCTGTAGAGTGTTGGATTGGAAGAGGTCACCACTGCTaGATAGCCTTCGCCAAAGAATGGTGTAGTAAGTAC +
Preference number: 6 (lower is better)
Translates to: SVECWIGRGHHC*IAFAKEWCSKY
Trigger: GTACTTACTACACCATTCTTTGGCGAAGGCTATTCAGCAGTGGTGACCTCTTCCAATCCAACACTCTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS TCA 72 bp TCCACTGTCCACAATGAAAATTGGCAGATAGTAAACTaGTTGTTCCTGTCTCCGGAAGCCGTTTCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: STVHNENWQIVN*LFLSPEAVSPG
Trigger: ACCAGGAGAAACGGCTTCCGGAGACAGGAACAATCAGTTTACTATCTGCCAATTTTCATTGTGGACAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CCA 72 bp GAATTAAGGTTCCAAGGCTATGAGTACAAACTCTCTTaGCCAGTCCCATACATGTCCGCGAGTCGTTTAAAG +
Preference number: 6 (lower is better)
Translates to: ELRFQGYEYKLS*PVPYMSASRLK
Trigger: CTTTAAACGACTCGCGGACATGTATGGGACTGGCCAAGAGAGTTTGTACTCATAGCCTTGGAACCTTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS CAA 72 bp TCAGCTGGGAGTCCAGAGATAATAATCTGTAGAGTGTaGGATTGGAAGAGGTCACCACTGCTGAATAGCCTT +
Preference number: 6 (lower is better)
Translates to: SAGSPEIIICRV*DWKRSPLLNSL
Trigger: AAGGCTATTCAGCAGTGGTGACCTCTTCCAATCCAACACTCTACAGATTATTATCTCTGGACTCCCAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp ACCTCCCTGATTGGAAATAGGGCTTTGATCTGGACCTaGAGAGTTCTGCTTGACTCATCCCAGAAAAACACA +
Preference number: 6 (lower is better)
Translates to: TSLIGNRALIWT*RVLLDSSQKNT
Trigger: TGTGTTTTTCTGGGATGAGTCAAGCAGAACTCTCAAGGTCCAGATCAAAGCCCTATTTCCAATCAGGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp CGATCCAAAGACTTGGCAGTTGTGATGACCCCACTGTaGGCATCAATATTGAAGTATCTCTCCAAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: RSKDLAVVMTPL*ASILKYLSKSV
Trigger: CACAGACTTGGAGAGATACTTCAATATTGATGCCAACAGTGGGGTCATCACAACTGCCAAGTCTTTGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CCA 72 bp AAACTGATTGTTCCTGTCTCCGGAAGCCGTTTCTCCTaGTCAGTATTGAGGCTGTGTTGTCTTTGTTATCTT +
Preference number: 6 (lower is better)
Translates to: KLIVPVSGSRFS*SVLRLCCLCYL
Trigger: AAGATAACAAAGACAACACAGCCTCAATACTGACCAGGAGAAACGGCTTCCGGAGACAGGAACAATCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp GTTCCTGTCTCCGGAAGCCGTTTCTCCTGGTCAGTATaGAGGCTGTGTTGTCTTTGTTATCTTTCAATGAAA +
Preference number: 6 (lower is better)
Translates to: VPVSGSRFSWSV*RLCCLCYLSMK
Trigger: TTTCATTGAAAGATAACAAAGACAACACAGCCTCAATACTGACCAGGAGAAACGGCTTCCGGAGACAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CAA 72 bp CTACTGAATCTCCATTCTGCTCCATGTTGTGCTGTCTaGATGGTGCTTGGGTCCCAGTTTATTCATCTGTTA +
Preference number: 6 (lower is better)
Translates to: LLNLHSAPCCAV*MVLGSQFIHLL
Trigger: TAACAGATGAATAAACTGGGACCCAAGCACCATCAAGACAGCACAACATGGAGCAGAATGGAGATTCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS CAA 90 bp TTTGTCTCTCGATCCAAAGACTTGGCAGTTGTGATGACCCCACTGTaGGCATCAATATTGAAGTATCTCTCCAAGTCTGTGTTTCTGTCA +
Preference number: 6 (lower is better)
Translates to: FVSRSKDLAVVMTPL*ASILKYLSKSVFLS
Trigger: TGACAGAAACACAGACTTGGAGAGATACTTCAATATTGATGCCAACAGTGGGGTCATCACAACTGCCAAGTCTTTGGATCGAGAGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323011.7
ENST00000397968.4
ENST00000536984.6
CDS CCA 72 bp CCATTCTGCTCCATGTTGTGCTGTCTTGATGGTGCTTaGGTCCCAGTTTATTCATCTGTTATAGATCCATAT +
Preference number: 6 (lower is better)
Translates to: PFCSMLCCLDGA*VPVYSSVIDPY
Trigger: ATATGGATCTATAACAGATGAATAAACTGGGACCCAAGCACCATCAAGACAGCACAACATGGAGCAGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581601.1
CDS TCA 72 bp TTCTTCAGTACATTTCGAATTAAGGTTCCAAGGCTATaGGTACAAACTCTCTTGGCCAGTCCCATACATGTC +
Preference number: 6 (lower is better)
Translates to: FFSTFRIKVPRL*VQTLLASPIHV
Trigger: GACATGTATGGGACTGGCCAAGAGAGTTTGTACTCATAGCCTTGGAACCTTAATTCGAAATGTACTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323011.7
ENST00000397968.4
CDS TCA 72 bp TATGTTCACCAAATGGAGAAGATAATAGGCAAGTCGTaGCATGTGGTTATTGTGACAGCTCTTTCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: YVHQMEKIIGKS*HVVIVTALSEQ
Trigger: TTGCTCTGAAAGAGCTGTCACAATAACCACATGTCACGACTTGCCTATTATCTTCTCCATTTGGTGAACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536984.6