RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH5 (Homo sapiens)

Ensembl gene IDs: ENSG00000179776

Ensembl transcript IDs: ENST00000341529.8, ENST00000539168.1, ENST00000562048.5, ENST00000563425.2, ENST00000565334.5, ENST00000568023.1, ENST00000568155.2, ENST00000614547.4, ENST00000649567.1

Found 1088 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCATCTCCCCGGGCCCTCCGTGTGCCCCAGGCGCGTGCCTCGGTaGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGCGC +
Preference number: 1 (lower is better)
Translates to: CHLPGPSVCPRRVPR*LLHLRIEGRPGVQR
Trigger: GCGCTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACACGGAGGGCCCGGGGAGATGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CCA 90 bp GGCCGTCGCCGTCGTGGTCCGCCTCGTCCTTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCCCTCCGTGTGCCCCAGGCGCGTGCC +
Preference number: 1 (lower is better)
Translates to: GRRRRGPPRPSSPRS*LPSPRALRVPQARA
Trigger: GGCACGCGCCTGGGGCACACGGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGAAGGACGAGGCGGACCACGACGGCGACGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp GTCGCCGTCGTGGTCCGCCTCGTCCTTCTTCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCCGTGTGCCCCAGGCGCGTGCCTCGG +
Preference number: 1 (lower is better)
Translates to: VAVVVRLVLLHLDHG*HLPGPSVCPRRVPR
Trigger: CCGAGGCACGCGCCTGGGGCACACGGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGAAGGACGAGGCGGACCACGACGGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp ACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACGGCCACGGTCAGCGTGCTGGTGCCC +
Preference number: 1 (lower is better)
Translates to: TPTWAAISSQKVNSP*SLHLHTATVSVLVP
Trigger: GGGCACCAGCACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp CTTCTTCACCTCGATCATGGCTGCCATCTCCCCGGGCCCTCCGTGTaGCCCAGGCGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAG +
Preference number: 1 (lower is better)
Translates to: LLHLDHGCHLPGPSV*PRRVPRWLLHLRIE
Trigger: CTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACACGGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 90 bp CCTGGATGCTCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGCACTTGCACACGGCCACGGTCAGCG +
Preference number: 1 (lower is better)
Translates to: PGCSRPPGRPYPRRR*TRPARCTCTRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCATCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp GGGCTGCAGAGAATCCTGCCCCACAAGTCAAGCTGTCCAGGCCTTTaGCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCTTACCAGG +
Preference number: 1 (lower is better)
Translates to: GLQRILPHKSSCPGL*LQADRHQDLTSLTR
Trigger: CCTGGTAAGGCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp GCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAATCCTGCCCCACAAGTCAAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: AGLGLPREGMMVSLP*EWAAENPAPQVKLS
Trigger: GGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp CCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACCATGCTAGGTaGGGGAGTCCAGGCAGGTCAAGATGCCAGGCTGCCAAGTGCAAG +
Preference number: 1 (lower is better)
Translates to: PDRGQVALDAQDHAR*GSPGRSRCQAAKCK
Trigger: CTTGCACTTGGCAGCCTGGCATCTTGACCTGCCTGGACTCCCCCACCTAGCATGGTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR TCA 90 bp AGTCGTAATCCACGTCAGAGTCGGATGAGTCGGTGCCCAGGGAGCTaGGGGACTCGGCTATGGACTCGGAGCCCTCGTAGCCGTAGATGT +
Preference number: 1 (lower is better)
Translates to: SRNPRQSRMSRCPGS*GTRLWTRSPRSRRC
Trigger: ACATCTACGGCTACGAGGGCTCCGAGTCCATAGCCGAGTCCCTCAGCTCCCTGGGCACCGACTCATCCGACTCTGACGTGGATTACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp GCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTaGAGAGAATCCTGCCCCACAAGTCAAGCTGTCCAGGCCTTTGCC +
Preference number: 1 (lower is better)
Translates to: APERGHDGQSPLGMG*RESCPTSQAVQAFA
Trigger: GGCAAAGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp CTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCCCCACAAGTCAAGCTGTCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: LGLPREGMMVSLPWE*AAENPAPQVKLSRP
Trigger: AGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 90 bp AGGCCTTCTCCAGAGGGGGTGGGTGTGGAGGTGGCCCTCACCCTGTaGTCTGTCACTCCTGATCTCCACTGCCCCTCCAGAATGAATTCA +
Preference number: 1 (lower is better)
Translates to: RPSPEGVGVEVALTL*SVTPDLHCPSRMNS
Trigger: TGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCACAGGGTGAGGGCCACCTCCACACCCACCCCCTCTGGAGAAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 90 bp TCAGCGTGCTGGTGCCCGTGCGACTTGGCATCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGACCTTGGTATGCTCCCGGTCAAACT +
Preference number: 1 (lower is better)
Translates to: SACWCPCDLASHCLR*PRVGSGPWYAPGQT
Trigger: AGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGGCACCAGCACGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp GGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGAATCCTaGCCCACAAGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATA +
Preference number: 1 (lower is better)
Translates to: GHDGQSPLGMGCRES*PTSQAVQAFASRQI
Trigger: TATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 90 bp GGGGGTGGGTGTGGAGGTGGCCCTCACCCTGTGATCTGTCACTCCTaGTCTCCACTGCCCCTCCAGAATGAATTCACAGTTGCTTCAAAG +
Preference number: 1 (lower is better)
Translates to: GGGCGGGPHPVICHS*SPLPLQNEFTVASK
Trigger: CTTTGAAGCAACTGTGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCACAGGGTGAGGGCCACCTCCACACCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp GGAGTCCAGGCAGGTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTaGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGTGCTAGG +
Preference number: 1 (lower is better)
Translates to: GVQAGQDARLPSARA*ASGLASVTFPVSAR
Trigger: CCTAGCACTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGACCTGCCTGGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CCA 90 bp AGCCTTGGGGAGCCAGAGGAAGTCTTTGAGTTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGATGTCTGAGCCCAGACAGAACACCA +
Preference number: 1 (lower is better)
Translates to: SLGEPEEVFELDGGL*VTGLCGCLSPDRTP
Trigger: TGGTGTTCTGTCTGGGCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGCTCCCCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp TTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACTTCAGGACCCAAGGTCAGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: FPECGSVLSTAQLLA*QASEVTSGPKVRSC
Trigger: GCAGCTCCTGACCTTGGGTCCTGAAGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp GCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTaGCATGGCAGGCCAGTGAGGTCACTTCAGGACCCAAGGTCAGGA +
Preference number: 1 (lower is better)
Translates to: AISLNVVQCSVQHSY*HGRPVRSLQDPRSG
Trigger: TCCTGACCTTGGGTCCTGAAGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp AGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTaGGAACCTCGGTCCATGACGAAGGGTGAGCTTGGTGTCTCCTTC +
Preference number: 1 (lower is better)
Translates to: SVIYNPLQCEGLCPE*EPRSMTKGELGVSF
Trigger: GAAGGAGACACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp GTGCGACTTGGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGGTCAAACTGCCCATACTTGACTGTG +
Preference number: 1 (lower is better)
Translates to: VRLGIPLSEMTTGRK*TLVCSRSNCPYLTV
Trigger: CACAGTCAAGTATGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 90 bp GGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGTATTCATAATCCAGAGGCTTCATGG +
Preference number: 1 (lower is better)
Translates to: GSCIGGRWWGLWPRR*SCIAGCIHNPEASW
Trigger: CCATGAAGCCTCTGGATTATGAATACATCCAGCAATACAGCTTCATCGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 90 bp AAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTaGCCAGAGTGGGAACCTCGGTCCATGACGAAGGGTGAGCTTGGT +
Preference number: 1 (lower is better)
Translates to: KQVSVIYNPLQCEGL*PEWEPRSMTKGELG
Trigger: ACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp CGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGTTTTGCTAAAGGCCACATCTTGGGT +
Preference number: 1 (lower is better)
Translates to: RGVKTHGSAPSCSHE*VWTLSSFAKGHILG
Trigger: ACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp GTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCT +
Preference number: 1 (lower is better)
Translates to: VKTHGSAPSCSHEWV*TLSSFAKGHILGSS
Trigger: AGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 90 bp GGGTTATGTGGATGTCTGAGCCCAGACAGAACACCAGCCTGGATTTaGCAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATA +
Preference number: 1 (lower is better)
Translates to: GLCGCLSPDRTPAWI*QHLRIVITDIYSWI
Trigger: TATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTTCTGTCTGGGCTCAGACATCCACATAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp AACAGACAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTaGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTAGGCCACGAA +
Preference number: 1 (lower is better)
Translates to: NRQQQTHHKCIHMFV*SRKERSNRTRLGHE
Trigger: TTCGTGGCCTAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR TCA 90 bp CAGAACACCAGCCTGGATTTGCCAGCATTTGAGAATAGTCATCACTaGCATATATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCC +
Preference number: 1 (lower is better)
Translates to: QNTSLDLPAFENSHH*HIFLDISGTWSLLS
Trigger: GGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp ATGAGTGGGTTTGGACATTGTCCAGTTTTGCTAAAGGCCACATCTTaGGTTCCTCTAAACCAAGGGATAAGGAGTAGACAGAGAAAAGAA +
Preference number: 1 (lower is better)
Translates to: MSGFGHCPVLLKATS*VPLNQGIRSRQRKE
Trigger: TTCTTTTCTCTGTCTACTCCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp TGGATTTGCCAGCATTTGAGAATAGTCATCACTGACATATATTCCTaGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAG +
Preference number: 1 (lower is better)
Translates to: WICQHLRIVITDIYS*IFQEPGVCYPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTGGCAAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR CCA 90 bp AAAGTTGTTCTCAGTATTCAAGATGAATTTGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTATTGCGGAGATCTGCAGGACCAGCTG +
Preference number: 1 (lower is better)
Translates to: KVVLSIQDEFELHVS*CYVLVYCGDLQDQL
Trigger: CAGCTGGTCCTGCAGATCTCCGCAATAGACAAGGACATAACACCACGAAACGTGAAGTTCAAATTCATCTTGAATACTGAGAACAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 2 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR GCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVLTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCCACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCAGTGGAGTATGGAGTTaGAGCAGGGCTAGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRSGVWS*SRARAP
Trigger: GGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 90 bp GCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCGTTGCACTaGCACACGGCCACGGTCAGCGTGCTGGTGCCCGTGCGACTTGGC +
Preference number: 2 (lower is better)
Translates to: AAISSQKVNSPCSLH*HTATVSVLVPVRLG
Trigger: GCCAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CAA 90 bp ACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCGTaGCACTTGCACACGGCCACGGTCAGCGTGCTGGTGCCCGTGCGA +
Preference number: 2 (lower is better)
Translates to: TWAAISSQKVNSPCS*HLHTATVSVLVPVR
Trigger: TCGCACGGGCACCAGCACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCCATGGCCAGCACTGTaGCAATCAGAGGCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRPWPAL*QSEASS
Trigger: AGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATG +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRMMPSL*AGFVSM
Trigger: CATTGAGACAAACCCCGCCCACAACGAGGGCATCAT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCGTTCTCACACACTTTaGGCTGGTAGGGCTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRRSHTL*AGRAWQ
Trigger: TTGCCAAGCCCTACCAGCCCAAAGTGTGTGAGAACG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp GGCCCCGCCGCGGCGCACCGAGTTGAGCACCGACACATCGTAGCTGGTGGTGTCACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: GPAAAHRVEHRHIVAGGVTTGRK*TLVCSR
Trigger: CCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGT...GACACCACCAGCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCGGCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR GCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: GLPREGMMVSLPWEWAAELTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp CGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 2 (lower is better)
Translates to: RVPRWLLHLRIEGRPGVQKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...CTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: GLPREGMMVSLPWEWAAETRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 2 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 2 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 2 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR CAA 90 bp ACGGCCACGGTCAGCGTGCTGGTGCCCGTGCGACTTGGCATCCCATaGTCTGAGATGACCACGGGTAGGAAGTGGACCTTGGTATGCTCC +
Preference number: 2 (lower is better)
Translates to: TATVSVLVPVRLGIP*SEMTTGRKWTLVCS
Trigger: GGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCACGGCGGTCTGTGGGTaGCAGGGTTATGTGGATGTC +
Preference number: 2 (lower is better)
Translates to: WSWSRARAPERGHDGQSPTAVCG*QGYVDV
Trigger: GACATCCACATAACCCTGTCACCCACAGACCGCCGT...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCAGGACCAGCTGGCCATaGACAGCGTTCTCACACACT +
Preference number: 2 (lower is better)
Translates to: SSRGSEPYSSASILNLGPRTSWP*TAFSHT
Trigger: AGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCCT...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CAA 90 bp AGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTaGGGAATGGGCTGCAGAGAATCCTGCCCCACAAGTCAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: SRARAPERGHDGQSP*GMGCRESCPTSQAV
Trigger: GACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGGGGTGGGTGTGGAGGTaGCCCTCACCCTGTGATCTG +
Preference number: 2 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQGWVWR*PSPCDL
Trigger: CAGATCACAGGGTGAGGGCCACCTCCACACCCACCC...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GCTCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 2 (lower is better)
Translates to: AHAHLGGHILAEGELALLMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...GAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCCCCTTCCTCCCTCTTaGCAGGCCTGGAGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQPLPPS*QAWRGV
Trigger: AACCCCTCTCCAGGCCTGTCAAGAGGGAGGAAGGGG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCAGTGGCCCTCACCCTGTaGTCTGTCACTCCTGATCTC +
Preference number: 2 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSVALTL*SVTPDL
Trigger: GAGATCAGGAGTGACAGATCACAGGGTGAGGGCCAC...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGLTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 2 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 2 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGGGCTGGGGAGTCACTaGCATTTTTGGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPGLGSH*HFWRLW
Trigger: CCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GCTCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCTGTGGACTTGCACAATaGATTCTTTTCCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AHAHLGGHILAEGELALLCGLAQ*ILFLWG
Trigger: CCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACA...GAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPARGSL*VRRRSV
Trigger: CACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGC...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGGCCAGTTCCCCTCTCTaGGTCCTGGCCTCAGACCAG +
Preference number: 2 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKASSPL*VLASDQ
Trigger: CTGGTCTGAGGCCAGGACTCAGAGAGGGGAACTGGC...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR-3UTR GCA 90 bp TCAAGGCCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACCATGCTAGGTGGGTCAAGATGCCAGGCTaGCAAGTGCAAGAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SRPDRGQVALDAQDHARWVKMPG*QVQELG
Trigger: CCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC...CCACCTAGCATGGTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 2 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGTGATCTGTCACTCCTaGTCTCCACTGCCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQVICHS*SPLPLQ
Trigger: CTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCAC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp CCCGTGCGACTTGGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGTGGACCCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 2 (lower is better)
Translates to: PVRLGIPLSEMTTGRKWTLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...GGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGCTGGGGAGTCACTaGCATTTTTGGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEGLGSH*HFWRLW
Trigger: CCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 2 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CCAGCACTGTGCCAATCAGAGGCTTCTTCTGGTTTTCCTTCAGCTGGAAGTGGTACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: PALCQSEASSGFPSAGSGTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...ACCACTTCCAGCTGAAGGAAAACCAGAAGAAGCCTCTGATTGGCACAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCATTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGA +
Preference number: 2 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPLDGGL*VTGLCG
Trigger: TCCACATAACCCTGTCACCCACAGACCGCCGTCTAA...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCATTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGA +
Preference number: 2 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSLDGGL*VTGLCG
Trigger: TCCACATAACCCTGTCACCCACAGACCGCCGTCTAA...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 2 (lower is better)
Translates to: TDATSPRCVCSETFQWKMPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 2 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCAAACACAGTCTGTTTTaGTTTGCAGCCTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSKHSLF*FAALGS
Trigger: GCTCCCCAAGGCTGCAAAGCAAAACAGACTGTGTTT...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 2 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVSLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGAGTGGAGTATGGAGTTaGAGCAGGGCTAGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGSGVWS*SRARAP
Trigger: GGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACT...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGACTTGGAGTGGAGTATaGAGTTGGAGCAGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQTWSGV*SWSRAR
Trigger: CCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGT...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGTGGGGCACTTGGAGTaGAGTATGGAGTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEVGHLE*SMELEQ
Trigger: CTGCTCCAACTCCATACTCCACTCCAAGTGCCCCAC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGTGGGGCACTTGGAGTaGAGTATGGAGTTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQVGHLE*SMELEQ
Trigger: CTGCTCCAACTCCATACTCCACTCCAAGTGCCCCAC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGCTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQLLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACCAGTGGAAGATGCATaGGTGACCACAGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEPVEDA*VTTEVG
Trigger: CCCAACCTCTGTGGTCACCCATGCATCTTCCACTGG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFAARGSL*VRRRSV
Trigger: CACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGC...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGARGSL*VRRRSV
Trigger: CACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 2 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGAGGGGAGACGTCTTCTaGTCCGGGAACATCTGCCCC +
Preference number: 2 (lower is better)
Translates to: TDATSPRCVCSETFQWKMRGDVF*SGNICP
Trigger: GGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCT...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 2 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGGGTGGGTGTGGAGGTaGCCCTCACCCTGTGATCTG +
Preference number: 2 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRGWVWR*PSPCDL
Trigger: CAGATCACAGGGTGAGGGCCACCTCCACACCCACCC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGCTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: DREKKESMDWRPGEAEKGLLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTCTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFALLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 90 bp CTTGGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGTGGACCTaGGTATGCTCCCGGTCAAACTGCCCATACTTGACTGTGATGTTG +
Preference number: 2 (lower is better)
Translates to: LGIPLSEMTTGRKWT*VCSRSNCPYLTVML
Trigger: CAACATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGGTTATGTGGATGTCTaGGCCCAGACAGAACACCAG +
Preference number: 2 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWGYVDV*AQTEHQ
Trigger: CTGGTGTTCTGTCTGGGCTCAGACATCCACATAACC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 2 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGAAACACAGTCTGTTTTaGTTTGCAGCCTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQKHSLF*FAALGS
Trigger: GCTCCCCAAGGCTGCAAAGCAAAACAGACTGTGTTT...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGGATATTTCAGGAACCTaGAGTTTGCTATCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQDISGT*SLLSQG
Trigger: GCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATC...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 90 bp TCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGATGAAGCTGTATaGCTGGATGTATTCATAATCCAGAGGCTTCATGGGCTTGATGAT +
Preference number: 2 (lower is better)
Translates to: SEVDGGVCGLDDEAV*LDVFIIQRLHGLDD
Trigger: ATCATCAAGCCCATGAAGCCTCTGGATTATGAATACATCCAGCAATACAGCTTCATCGTCGAGGCCACAGACCCCACCATCGACCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCTGAATGTGGTTCAGTaGTCAGTACAGCACAGTTAC +
Preference number: 2 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQLNVVQ*SVQHSY
Trigger: GTAACTGTGCTGTACTGAGCACTGAACCACATTCAG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWMVSLP*EWAAEN
Trigger: ATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCAT...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAAGATAGATTCAAGAATACAGTTTTAGTGAAGGGGCCTCTGGTGTGTCGTCTGCCCCTCTCTGAGTCCTaGCCTCAGACCAGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: EDRFKNTVLVKGPLVCRLPLSES*PQTSRH
Trigger: ATGCCTGCTGGTCTGAGGCCAGGACTCAGAGAGGGG...CAGACGACACACCAGAGGCCCCTTCACTAAAACTGTATTCTTGAATCTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CAA 90 bp CGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTaGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGG +
Preference number: 2 (lower is better)
Translates to: RLRHAVMSGFGHCPV*LKATSWVPLNQGIR
Trigger: CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 90 bp ACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATaGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCA +
Preference number: 2 (lower is better)
Translates to: THGSAPSCSHEWVWT*SSFAKGHILGSSKP
Trigger: TGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCACATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 2 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 2 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 2 (lower is better)
Translates to: CPVLLKATSWVPLNQGIREGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 2 (lower is better)
Translates to: ISHFPECGSVLSTAQLLASLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAGAGTGGTGGGGCACTTaGAGTGGAGTATGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAEWWGT*SGVWSW
Trigger: CCAACTCCATACTCCACTCCAAGTGCCCCACCACTC...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: EPGVCYPKADEVSGTHEESHEWV*TLSSFA
Trigger: AGCAAAACTGGACAATGTCCAAACCCACTCATGACT...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATAAGGCTGCTGGAAAATaGGGGGCTCGTCCACATCTG +
Preference number: 2 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNKAAGK*GARPHL
Trigger: CAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTT...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR TCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGAAACTGGAGGGGTGCTaGGGAGTCTCAAAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRKLEGC*GVSKQG
Trigger: ACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTT...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp TGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCAGTTCTCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 2 (lower is better)
Translates to: WTCTMDSFPVGVPVESSSQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...AGAACTGGATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGGTGACAGGGTTATGTaGATGTCTGAGCCCAGACAG +
Preference number: 2 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRGDRVM*MSEPRQ
Trigger: CTGTCTGGGCTCAGACATCCACATAACCCTGTCACC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGTTTGCTTTGCAGCCTTaGGGAGCCAGAGGAAGTCTT +
Preference number: 2 (lower is better)
Translates to: TDATSPRCVCSETFQWKMFALQP*GARGSL
Trigger: AAGACTTCCTCTGGCTCCCCAAGGCTGCAAAGCAAA...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGGCCTGGAGAGGGGTTaGGGAGTGGTGGGGCACTTG +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIGLERG*GVVGHL
Trigger: CAAGTGCCCCACCACTCCCCAACCCCTCTCCAGGCC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRMVSLP*EWAAEN
Trigger: ATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCAT...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWSHEWV*TLSSFA
Trigger: AGCAAAACTGGACAATGTCCAAACCCACTCATGACT...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTTCCCGAGAGAGGGCATaGTGGTCAGTCTCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISRERA*WSVSLG
Trigger: CCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGA...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp TGGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTAGGCCACGAACATGAGTTACTCTGGTGTGTCGTCTaGTTGGTTGCTTTCTTGACT +
Preference number: 2 (lower is better)
Translates to: WSRKERSNRTRLGHEHELLWCVV*LVAFLT
Trigger: AGTCAAGAAAGCAACCAATCAGACGACACACCAGAG...TAACTCATGTTCGTGGCCTAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR-3UTR TCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 2 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CAA 90 bp GGATGTCTGAGCCCAGACAGAACACCAGCCTGGATTTGCCAGCATTaGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: GCLSPDRTPAWICQH*RIVITDIYSWIFQE
Trigger: TTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTTCTGTCTGGGCTCAGACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCTCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFASCSHE*VWTLSS
Trigger: ACTGGACAATGTCCAAACCCACTCATGACTGCATGA...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGGTGACAGGGTTATGTaGATGTCTGAGCCCAGACAG +
Preference number: 2 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPGDRVM*MSEPRQ
Trigger: CTGTCTGGGCTCAGACATCCACATAACCCTGTCACC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTTCCGTCATGCAGTCATaGGTGGGTTTGGACATTGTC +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISVMQS*VGLDIV
Trigger: GACAATGTCCAAACCCACTCATGACTGCATGACGGA...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTACTCCTGATCTCCACTaGCCCTCCAGAATGAATTCA +
Preference number: 2 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPTPDLH*PSRMNS
Trigger: TGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGT...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR GCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTTCTCCAAGGTGTGTTTaGAGTGAAACGTTCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISPRCV*SETFQW
Trigger: CCACTGGAACGTTTCACTGCAAACACACCTTGGAGA...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTACTGCCCCTCCAGAATaGATTCACAGTTGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: VLVMHQFGQYIDIICRAITAPPE*IHSCFK
Trigger: TTTGAAGCAACTGTGAATTCATTCTGGAGGGGCAGT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 72 bp TGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTaGTTCCGGAGCCGCCGCCGCAGGAAGATGAGCAGG +
Preference number: 3 (lower is better)
Translates to: WISGTLLPCARA*FRSRRRRKMSR
Trigger: CCTGCTCATCTTCCTGCGGCGGCGGCTCCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 72 bp CTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTaGCCTCGGCCGCCTAATACAGCAGCTCCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: LGCRGFGSPGPE*PRPPNTAAPPG
Trigger: CCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp GTGGTCCGCCTCGTCCTTCTTCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCCGTGTGCCCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: VVRLVLLHLDHG*HLPGPSVCPRR
Trigger: GCGCCTGGGGCACACGGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGAAGGACGAGGCGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGGAGTGGTGGGGCACTaGGAGTGGAGTATGGAGTTG +
Preference number: 3 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRGVVGH*EWSMEL
Trigger: CAACTCCATACTCCACTCCAAGTGCCCCACCACTCC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp CGTCGTGGTCCGCCTCGTCCTTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCCCTCCGTGTGCCCCAG +
Preference number: 3 (lower is better)
Translates to: RRGPPRPSSPRS*LPSPRALRVPQ
Trigger: CTGGGGCACACGGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGAAGGACGAGGCGGACCACGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 72 bp TCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGCACTTGCACACGGCCA +
Preference number: 3 (lower is better)
Translates to: SRPPGRPYPRRR*TRPARCTCTRP
Trigger: TGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp CCTGCTCGTTGCACTTGCACACGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTGGCATCCCATTGTCTG +
Preference number: 3 (lower is better)
Translates to: PARCTCTRPRSA*WCPCDLASHCL
Trigger: CAGACAATGGGATGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp TGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACGGCCACGGTCAGCGTG +
Preference number: 3 (lower is better)
Translates to: WAAISSQKVNSP*SLHLHTATVSV
Trigger: CACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCGTGGAATCCAGTTCTTaGGCCTCCACAGTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVVESSS*ASTVRL
Trigger: TAACCTGACTGTGGAGGCCAAAGAACTGGATTCCAC...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CCA 72 bp GGGGAGTGGTGGGGCACTTGGAGTGGAGTATGGAGTTaGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGAT +
Preference number: 3 (lower is better)
Translates to: GEWWGTWSGVWS*SRARAPERGHD
Trigger: ATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGTGCCCCACCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp GCTCGTTGCACTTGCACACGGCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCATCCCATTGTCTGAGA +
Preference number: 3 (lower is better)
Translates to: ARCTCTRPRSAC*CPCDLASHCLR
Trigger: TCTCAGACAATGGGATGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCGTGTGCAAGTGCAACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCTTATGTCCTTGTCTATaGCGGAGATCTGCAGGACCA +
Preference number: 3 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVLCPCL*RRSAGP
Trigger: TGGTCCTGCAGATCTCCGCAATAGACAAGGACATAA...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp GACCATGCTAGGTGGGGGAGTCCAGGCAGGTCAAGATaGCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DHARWGSPGRSR*QAAKCKSLGFW
Trigger: CCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGACCTGCCTGGACTCCCCCACCTAGCATGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CCA 72 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAATCCTGCCCCACAAGTC +
Preference number: 3 (lower is better)
Translates to: GLPREGMMVSLP*EWAAENPAPQV
Trigger: GACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCGAGTCACTGCCATTTTaGGAGGCTGTGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSESLPF*EAVVPG
Trigger: GCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTC...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 72 bp GGTCAGTCTCCCTTGGGAATGGGCTGCAGAGAATCCTaGCCCACAAGTCAAGCTGTCCAGGCCTTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: GQSPLGMGCRES*PTSQAVQAFAS
Trigger: GGAGGCAAAGGCCTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp GGACCAGCTGGCCATGGACAGCGTTCTCACACACTTTaGGCTGGTAGGGCTTGGCAAACTCCGGGGCATTGT +
Preference number: 3 (lower is better)
Translates to: GPAGHGQRSHTL*AGRAWQTPGHC
Trigger: ACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCAAAGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp TCAAGGCCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACCATGCTAGGTGGGCCAAGTGCAAGAGCTaGGGCTTCTGGTCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: SRPDRGQVALDAQDHARWAKCKS*GFWSCL
Trigger: GAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC...CCACCTAGCATGGTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGGCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR-3UTR CAA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCACAGTCTGTTTTGCTTaGCAGCCTTGGGGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSTVCFA*QPWGAR
Trigger: TCTGGCTCCCCAAGGCTGCAAAGCAAAACAGACTGT...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACGGAAGAACTGGCCCTaGTCACTGGTCCTGCGGATG +
Preference number: 3 (lower is better)
Translates to: EPGVCYPKADEVSGTHEERKNWP*SLVLRM
Trigger: CATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 72 bp TGGTGCCCGTGCGACTTGGCATCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGACCTTGGTATGCTCCC +
Preference number: 3 (lower is better)
Translates to: WCPCDLASHCLR*PRVGSGPWYAP
Trigger: GGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CCA 72 bp CCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCCCCACAAGTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: PREGMMVSLPWE*AAENPAPQVKL
Trigger: CAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp GGGGGCTCGTCCACATCTGTGATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGAGGGCTCATGTATCGG +
Preference number: 3 (lower is better)
Translates to: GGSSTSVMLIMT*ALFPAGGLMYR
Trigger: CCGATACATGAGCCCTCCCGCGGGAAACAGAGCCCAGGTCATTATCAACATCACAGATGTGGACGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGAGTCACTGCCATTTTaGGAGGCTGTGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEESLPF*EAVVPG
Trigger: GCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGGATGGTCAGTCTCCCTaGGGAATGGGCTGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQDGQSP*GMGCRE
Trigger: TTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATC...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 72 bp AGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTaGAGAGAATCCTGCCCCACAAGTCAAGCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: RGHDGQSPLGMG*RESCPTSQAVQ
Trigger: CTGGACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp TACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTaGGAACCTCGGTCCATGACGAAGGGTGAGCTTGGT +
Preference number: 3 (lower is better)
Translates to: YNPLQCEGLCPE*EPRSMTKGELG
Trigger: ACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp TCCAGAGGCTTCATGGGCTTGATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATGGTGAAAGCGTCCTGG +
Preference number: 3 (lower is better)
Translates to: SRGFMGLMMPSL*AGFVSMVKASW
Trigger: CCAGGACGCTTTCACCATTGAGACAAACCCCGCCCACAACGAGGGCATCATCAAGCCCATGAAGCCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGAGTCACTGCCATTTTaGGAGGCTGTGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: DREKKESMDWRPGEAEKGESLPF*EAVVPG
Trigger: GCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 72 bp CAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTaGGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGA +
Preference number: 3 (lower is better)
Translates to: QRKEREHGLATR*GREGETSSAPG
Trigger: TCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 72 bp CTGCAAGGTGTGCCTGAGGGTCAGTTCCCTGAGATGTaGCAACAGCGAGGTGTAAAGACACATGGCTCGGCT +
Preference number: 3 (lower is better)
Translates to: LQGVPEGQFPEM*QQRGVKTHGSA
Trigger: AGCCGAGCCATGTGTCTTTACACCTCGCTGTTGTCACATCTCAGGGAACTGACCCTCAGGCACACCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp GAGCCAGAGGAAGTCTTTGAGTTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGATGTCTGAGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: EPEEVFELDGGL*VTGLCGCLSPD
Trigger: GTCTGGGCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp TGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACTTCAGGACCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: CGSVLSTAQLLA*QASEVTSGPKV
Trigger: GACCTTGGGTCCTGAAGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTACTGAGCACTGAACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp GCAGGTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTaGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTA +
Preference number: 3 (lower is better)
Translates to: AGQDARLPSARA*ASGLASVTFPV
Trigger: TACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CCA 72 bp GGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGGTCAAACTGCCCATAC +
Preference number: 3 (lower is better)
Translates to: GIPLSEMTTGRK*TLVCSRSNCPY
Trigger: GTATGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp GCAGGACCAGCTGGCCATGGACAGCGTTCTCACACACTTTGGGCTGGTAGGGCTAACACCAGCCTGGATTaGCCAGCATTTGAGAATAGT +
Preference number: 3 (lower is better)
Translates to: AGPAGHGQRSHTLWAGRANTSLD*PAFENS
Trigger: ACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTT...AGCCCTACCAGCCCAAAGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp CTCGGAAGAACTGGCCCTTGTCACTGGTCCTGCGGATGGAGTATCCAATGCTATAGAGGCTTCATGGGCTaGATGATGCCCTCGTTGTGG +
Preference number: 3 (lower is better)
Translates to: LGRTGPCHWSCGWSIQCYRGFMG*MMPSLW
Trigger: CCACAACGAGGGCATCATCAAGCCCATGAAGCCTCT...ATAGCATTGGATACTCCATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR TCA 72 bp TTTGCTTTGCAGCCTTGGGGAGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTGGGTGACAGGGTTATG +
Preference number: 3 (lower is better)
Translates to: FALQPWGARGSL*VRRRSVGDRVM
Trigger: CATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGCTCCCCAAGGCTGCAAAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 72 bp TGTGGAGGTGGCCCTCACCCTGTGATCTGTCACTCCTaGTCTCCACTGCCCCTCCAGAATGAATTCACAGTT +
Preference number: 3 (lower is better)
Translates to: CGGGPHPVICHS*SPLPLQNEFTV
Trigger: AACTGTGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCACAGGGTGAGGGCCACCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 72 bp AGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTaGCCAGAGTGGGAACCTCGGTCCATGACGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SVIYNPLQCEGL*PEWEPRSMTKG
Trigger: ACCCTTCGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp CTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTaGCATGGCAGGCCAGTGAGGTCACTTCAGGACCCA +
Preference number: 3 (lower is better)
Translates to: LNVVQCSVQHSY*HGRPVRSLQDP
Trigger: TGGGTCCTGAAGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTGCTAAAGGCCACATCTaGGGTTCCTCTAAACCAAGG +
Preference number: 3 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVAKGHI*GSSKPR
Trigger: CCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGC...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR GCA 72 bp GAACTTCACGTTTCGTGGTGTTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAGCTGGCCATGGACAGC +
Preference number: 3 (lower is better)
Translates to: ELHVSWCYVLVY*GDLQDQLAMDS
Trigger: GCTGTCCATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGACAAGGACATAACACCACGAAACGTGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp GGTAGGAAGTGGACCTTGGTATGCTCCCGGTCAAACTaGCCATACTTGACTGTGATGTTGGCCGTGTTATCG +
Preference number: 3 (lower is better)
Translates to: GRKWTLVCSRSN*PYLTVMLAVLS
Trigger: CGATAACACGGCCAACATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGACATTGTCCAGTTTaGCTAAAGGCCACATCTTGG +
Preference number: 3 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEGHCPV*LKATSW
Trigger: CCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR TCA 72 bp ATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGTATTCATAATCCAGAG +
Preference number: 3 (lower is better)
Translates to: IGGRWWGLWPRR*SCIAGCIHNPE
Trigger: CTCTGGATTATGAATACATCCAGCAATACAGCTTCATCGTCGAGGCCACAGACCCCACCATCGACCTCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR GCA 72 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATaGAGTCATGAGTGGGTTTGGACATTGTCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: QRGVKTHGSAPS*SHEWVWTLSSF
Trigger: AAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp CATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCTAAAGGCCACATCTTG +
Preference number: 3 (lower is better)
Translates to: HGSAPSCSHEWV*TLSSFAKGHIL
Trigger: CAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CCA 72 bp AAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGTTTTGCTAAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: KTHGSAPSCSHE*VWTLSSFAKGH
Trigger: GTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGATTTGCCAGCATTaGAGAATAGTCATCACTGAC +
Preference number: 3 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVWICQH*RIVITD
Trigger: GTCAGTGATGACTATTCTCAAATGCTGGCAAATCCA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCAACACCAGCCTGGATTaGCCAGCATTTGAGAATAGT +
Preference number: 3 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSNTSLD*PAFENS
Trigger: ACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGTT...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGGACATTGTCCAGTTTaGCTAAAGGCCACATCTTGG +
Preference number: 3 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWGHCPV*LKATSW
Trigger: CCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATTTGATGATGCCCTCGTaGTGGGCGGGGTTTGTCTCA +
Preference number: 3 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNLMMPS*WAGFVS
Trigger: TGAGACAAACCCCGCCCACAACGAGGGCATCATCAA...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp TTCGTGGTGTTATGTCCTTGTCTATTGCGGAGATCTGCAGGACCAGCTGGCCATAACTTCAATGTGGACTaGCACAATGGATTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: FVVLCPCLLRRSAGPAGHNFNVD*HNGFFS
Trigger: GGAAAAGAATCCATTGTGCAAGTCCACATTGAAGTT...ATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGACAAGGACATAACACCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR-3UTR CAA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGAGTCACTGCCATTTTaGGAGGCTGTGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPESLPF*EAVVPG
Trigger: GCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGAGCAACATCCAGGCCGGATaGTCCTTATCATTCTCATCG +
Preference number: 3 (lower is better)
Translates to: QTHHKCIHMFVWSRKERSNIQAG*SLSFSS
Trigger: CGATGAGAATGATAAGGACAATCCGGCCTGGATGTT...GCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CCA 72 bp TTTGGACATTGTCCAGTTTTGCTAAAGGCCACATCTTaGGTTCCTCTAAACCAAGGGATAAGGAGTAGACAG +
Preference number: 3 (lower is better)
Translates to: FGHCPVLLKATS*VPLNQGIRSRQ
Trigger: CTGTCTACTCCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATGACGATGAAGCTGTATaGCTGGATGTATTCATAATC +
Preference number: 3 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNDDEAV*LDVFII
Trigger: GATTATGAATACATCCAGCAATACAGCTTCATCGTC...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
3UTR CCA 72 bp CAACAAACCCACCATAAATGCATCCACATGTTTGTGTaGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTA +
Preference number: 3 (lower is better)
Translates to: QQTHHKCIHMFV*SRKERSNRTRL
Trigger: TAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR-3UTR CAA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGCTAAAGGCCACATCTaGGGTTCCTCTAAACCAAGG +
Preference number: 3 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIAKGHI*GSSKPR
Trigger: CCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR-3UTR CAA 90 bp CAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGAGCGAACACTTCTTACTTTaGTGGTTTGGGGAAGATAGA +
Preference number: 3 (lower is better)
Translates to: QTHHKCIHMFVWSRKERSEHFLL*WFGEDR
Trigger: TCTATCTTCCCCAAACCACAAAAGTAAGAAGTGTTC...GCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CCA 72 bp CTCAGTATTCAAGATGAATTTGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTATTGCGGAGATCTGCAG +
Preference number: 3 (lower is better)
Translates to: LSIQDEFELHVS*CYVLVYCGDLQ
Trigger: CTGCAGATCTCCGCAATAGACAAGGACATAACACCACGAAACGTGAAGTTCAAATTCATCTTGAATACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRRPRSA*WCPCDL
Trigger: CAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGTCTCCGGCACGCTCTTaGCGTGCGCGCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RVPRWLLHLRIEGRPGVQSPARS*RARGPA
Trigger: AGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGA...CTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCCGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVRPRSA*WCPCDL
Trigger: CAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCG...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCAGGGGAGACGTCTTCTaGTCCGGGAACATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRRGDVF*SGNICP
Trigger: GGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCGCGGGAGGGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PAGGLMYRRSMVGSVASTGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...CGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCCCTCCCGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCAGGGCTGAGCGTGAGTaGAGCTCTGTGGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRRAERE*SSVEPV
Trigger: GACAGGCTCCACAGAGCTCCACTCACGCTCAGCCCT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR TCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCAATCCCTTGCAGTGTaGGGGGCTTTGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRQSLAV*GALPRV
Trigger: CACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGGGCACGCTCTTGCCGTaGGCGCGGGCCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGGTLLP*ARACFR
Trigger: CCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCC...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGGGCACGCTCTTGCCGTaGGCGCGGGCCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWGTLLP*ARACFR
Trigger: CCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCC...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCCCTTGGGAATGGGCTaGAGAGAATCCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRPLGMG*RESCPT
Trigger: TGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCATCCAATCTCTCTTTTaGCGCCGGTGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRIQSLF*RRWVGS
Trigger: GCTGCCCACCCACCGGCGCCAAAAGAGAGATTGGAT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCTACATGACAGAGGCGTaGTCTCCCACAGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRYMTEA*SPTVGS
Trigger: CGACCCCACTGTGGGAGACCACGCCTCTGTCATGTA...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCAGGCGCGTGCCTCGGTaGCTTCTGCACCTGCGCATA +
Preference number: 4 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVRRVPR*LLHLRI
Trigger: TATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCT...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CCCGCGGGAGGGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PAGGLMYRRSMVGSVASTCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...CGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCCCTCCCGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGGGGCTGGGGAGTCACTaGCATTTTTGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPGLGSH*HFWRLW
Trigger: CCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp GCTCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: AHAHLGGHILAEGELALLPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...GAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGCTGTGGGTGTCCCGTTaGGCAGGGTTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RVPRWLLHLRIEGRPGVQLWVSR*AGLAPA
Trigger: AGCAGGTGCTAACCCTGCCCAACGGGACACCCACAG...CTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp ACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCGTTGGGGCCGTCGCCGTCGTaGTCCGCCTCGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TPTWAAISSQKVNSPCSLGPSPS*SASSFF
Trigger: GAAGAAGGACGAGGCGGACCACGACGGCGACGGCCC...CAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGREGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCCAGTGGAAGATGCATaGGTGACCACAGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRPVEDA*VTTEVG
Trigger: CCCAACCTCTGTGGTCACCCATGCATCTTCCACTGG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCTCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRSHCLR*PRVGSG
Trigger: TCCACTTCCTACCCGTGGTCATCTCAGACAATGGGA...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGGTTATGTGGATGTCTaGGCCCAGACAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRGYVDV*AQTEHQ
Trigger: CTGGTGTTCTGTCTGGGCTCAGACATCCACATAACC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGRPRSA*WCPCDL
Trigger: CAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGCACGCTCTTGCCGTaGGCGCGGGCCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLGTLLP*ARACFR
Trigger: CCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSRGSEPYSSASILNLGPLTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGTGGGCAGCAGGCTGTaGGTGTCCCGTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGVGSRL*VSRWAG
Trigger: CCCTGCCCAACGGGACACCCACAGCCTGCTGCCCAC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGGGCCGTCGCCGTCGTaGTCCGCCTCGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGGPSPS*SASSFF
Trigger: GAAGAAGGACGAGGCGGACCACGACGGCGACGGCCC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGGCCGTCGCCGTCGTaGTCCGCCTCGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGGPSPS*SASSFF
Trigger: GAAGAAGGACGAGGCGGACCACGACGGCGACGGCCC...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGGGGCTGCAGGGGGTTTaGGTCCCCAGGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGGLQGV*VPRPRV
Trigger: CACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCC...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCTTGCGACTCACGCTTaGCTTGATCTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRLATHA*LDLAYM
Trigger: CATGTAGGCAAGATCAAGTCAAGCGTGAGTCGCAAG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACCGCGGCGCACCGAGTTaGGCACCGACACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDRGAPS*APTHRS
Trigger: GCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCG...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGTGCCCAGGGAGCTaGGGGACTCGGCTATGGACT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGRCPGS*GTRLWT
Trigger: AGTCCATAGCCGAGTCCCTCAGCTCCCTGGGCACCG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCGGTGCCCAGGGAGCTaGGGGACTCGGCTATGGACT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGRCPGS*GTRLWT
Trigger: AGTCCATAGCCGAGTCCCTCAGCTCCCTGGGCACCG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCTCCCCAGGCCCAGAGTaGCCTCGGCCGCCTAATACA +
Preference number: 4 (lower is better)
Translates to: SSRGSEPYSSASILNLGPSPGPE*PRPPNT
Trigger: TGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGGA...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGCACGTCTCCTGTCTCTaGATCGACCCGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: RVPRWLLHLRIEGRPGVQHVSCL*IDPEDL
Trigger: AAGGTCTTCCGGGTCGATGCAGAGACAGGAGACGTG...CTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGCCATGGCCAGCACTGTaGCAATCAGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPPWPAL*QSEASS
Trigger: AGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGG...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGGTCAGCGTGCTGGTaGCCGTGCGACTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWRSACW*PCDLAS
Trigger: GGATGCCAAGTCGCACGGGCACCAGCACGCTGACCG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCCGGTCAGCGTGCTGGTaGCCGTGCGACTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPRSACW*PCDLAS
Trigger: GGATGCCAAGTCGCACGGGCACCAGCACGCTGACCG...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSRPRSA*WCPCDL
Trigger: CAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGTCTCCGGCACGCTCTTaGCGTGCGCGCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWSPARS*RARGPA
Trigger: AGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGA...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTCTCCGGCACGCTCTTaGCGTGCGCGCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLSPARS*RARGPA
Trigger: AGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGHLDHG*HLPGPS
Trigger: GGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTG...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAEHLDHG*HLPGPS
Trigger: GGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGLTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACCCCAAGGTCAGGAGCTaGCATGGGGCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDPKVRS*HGAPSS
Trigger: GGAGGAAGGGGCCCCATGGCAGCTCCTGACCTTGGG...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTCTTTTGGCGCCGGTaGGTGGGCAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWLFWRR*VGSRLW
Trigger: CCACAGCCTGCTGCCCACCCACCGGCGCCAAAAGAG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCCAGGCCCAGAGTGACCTCGGCCGCCTAATACAGCAGCTCCTCCCGGGGGTCACTGGCCCTTGTCACTaGTCCTGCGGATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: PQAQSDLGRLIQQLLPGVTGPCH*SCGWSI
Trigger: GATACTCCATCCGCAGGACCAGTGACAAGGGCCAGT...GACCCCCGGGAGGAGCTGCTGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGCTGTGGGGGTTCCAGTaGAATCCAGTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPLWGFQ*NPVLWP
Trigger: AGGCCAAAGAACTGGATTCCACTGGAACCCCCACAG...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPRSAC*CPCDLA
Trigger: TGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTCACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AHAHLGGHILAEGELALLMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...GAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRMVSLP*EWAAEN
Trigger: ATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCAT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGCCTGGAGAGGGGTTaGGGAGTGGTGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGGLERG*GVVGHL
Trigger: CAAGTGCCCCACCACTCCCCAACCCCTCTCCAGGCC...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCCAGAGGGGGTGGGTGTaGAGGTGGCCCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPQRGWV*RWPSPC
Trigger: ACAGGGTGAGGGCCACCTCCACACCCACCCCCTCTG...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCAGAGGGGGTGGGTGTaGAGGTGGCCCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWQRGWV*RWPSPC
Trigger: ACAGGGTGAGGGCCACCTCCACACCCACCCCCTCTG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTCGCGGCGCACCGAGTTaGGCACCGACACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTRGAPS*APTHRS
Trigger: GCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCG...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTCCCCAGGCCCAGAGTaGCCTCGGCCGCCTAATACA +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGSPGPE*PRPPNT
Trigger: TGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGGA...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTCCCCAGGCCCAGAGTaGCCTCGGCCGCCTAATACA +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDSPGPE*PRPPNT
Trigger: TGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGGA...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCCCTTCCTCCCTCTTaGCAGGCCTGGAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWPLPPS*QAWRGV
Trigger: AACCCCTCTCCAGGCCTGTCAAGAGGGAGGAAGGGG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCCCCGCCGCGGCGCACCGAGTTGAGCACCGACACATCGTAGCTGGTGGTGTCCCTTGTCACTGGTCCTaGGGATGGAGTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: GPAAAHRVEHRHIVAGGVPCHWS*GWSIQC
Trigger: GCATTGGATACTCCATCCGCAGGACCAGTGACAAGG...GACACCACCAGCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCGGCGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCTGCTCGTTGCACTTaGACACGGCCACGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGPARCT*TRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCACTCGCCCTGCTCGTTaGACTTGCACACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGTRPAR*TCTRPR
Trigger: CCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGACTCGCCCTGCTCGTTaGACTTGCACACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWTRPAR*TCTRPR
Trigger: CCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCCCTCGTTGTGGGCGGGGTTTGTCTCAATGGTGAAAGCGTCCTGGTAGTCGCCCTACCACTGCCTGGATaGTCACGCCCACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ALVVGGVCLNGESVLVVALPLPG*SRPPGR
Trigger: CCGCCCAGGTGGGCGTGAGCATCCAGGCAGTGGTAG...GGCGACTACCAGGACGCTTTCACCATTGAGACAAACCCCGCCCACAACGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCTACCACTGCCTGGATaGTCACGCCCACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSLPLPG*SRPPGR
Trigger: CCGCCCAGGTGGGCGTGAGCATCCAGGCAGTGGTAG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CGCATCAGGGTCCATGGCCAGCACTGTGCCAATCAGAGGCTTCTTCTGGTTTTCGGCACGCTCTTGCCGTaGGCGCGGGCCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RIRVHGQHCANQRLLLVFGTLLP*ARACFR
Trigger: CCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCC...GAAAACCAGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGGACCCTGATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSHLDHG*HLPGPS
Trigger: GGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCAAACACAGTCTGTTTTaGTTTGCAGCCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRKHSLF*FAALGS
Trigger: GCTCCCCAAGGCTGCAAAGCAAAACAGACTGTGTTT...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGTGGGCAGCAGGCTGTaGGTGTCCCGTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWVGSRL*VSRWAG
Trigger: CCCTGCCCAACGGGACACCCACAGCCTGCTGCCCAC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCATGCTCACGCCCACCTaGGCGGCCATATCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCMLTPT*AAISSQ
Trigger: CTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCAT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGATGCTCACGCCCACCTaGGCGGCCATATCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGMLTPT*AAISSQ
Trigger: CTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCAT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCGTTGGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TPTWAAISSQKVNSPCSLVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...CAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCCCGACACATCGTAGCTaGTGGTGTCCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSRGSEPYSSASILNLGPPTHRS*WCPSRR
Trigger: GCGGCGAGATGGACACCACCAGCTACGATGTGTCGG...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCAGGCGCGTGCCTCGGTaGCTTCTGCACCTGCGCATA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGRRVPR*LLHLRI
Trigger: TATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCGGGCCGTCGCCGTCGTaGTCCGCCTCGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSGPSPS*SASSFF
Trigger: GAAGAAGGACGAGGCGGACCACGACGGCGACGGCCC...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGGGGTGGGTGTGGAGGTaGCCCTCACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWGWVWR*PSPCDL
Trigger: CAGATCACAGGGTGAGGGCCACCTCCACACCCACCC...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCGCGGGAGGGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: PAGGLMYRRSMVGSVASTLVIRF*GSSGSR
Trigger: ACGTGACCCAGATGAGCCCCAGAACCGGATGACCAA...CGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCCCTCCCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCTTGTCGTTCACGTCATaGACTTTGATGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRLSFTS*TLMVKL
Trigger: CAGCTTCACCATCAAAGTTCATGACGTGAACGACAA...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACGCGGCGCACCGAGTTaGGCACCGACACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPRGAPS*APTHRS
Trigger: GCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCGGTGCCCAGGGAGCTaGGGGACTCGGCTATGGACT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCRCPGS*GTRLWT
Trigger: AGTCCATAGCCGAGTCCCTCAGCTCCCTGGGCACCG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp ATGGGCTTGATGATGCCCTCGTTGTGGGCGGGGTTTGTCTCAATGGTGAAAGCGGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: MGLMMPSLWAGFVSMVKAVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...CGCTTTCACCATTGAGACAAACCCCGCCCACAACGAGGGCATCATCAAGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CGCGTGCCTCGGTGGCTTCTGCACCTGCGCATAGAGGGAAGGCCGGGCGTCCAGAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: RVPRWLLHLRIEGRPGVQSIMSL*IFPGGT
Trigger: TGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCT...CTGGACGCCCGGCCTTCCCTCTATGCGCAGGTGCAGAAGCCACCGAGGCACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAGGGTTAGCACCTGCTaGTGCCACTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGRVSTC*CHCCHC
Trigger: GCAGTGGCAGCAGTGGCAGCAGCAGGTGCTAACCCT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGCGTGCTGGTGCCCGTaGGACTTGGCATCCCATTGT +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGACWCP*DLASHC
Trigger: ACAATGGGATGCCAAGTCGCACGGGCACCAGCACGC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCGGTCAGCGTGCTGGTaGCCGTGCGACTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCRSACW*PCDLAS
Trigger: GGATGCCAAGTCGCACGGGCACCAGCACGCTGACCG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCCTGCTCGTTGCACTTaGACACGGCCACGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSPARCT*TRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCTACCACTGCCTGGATaGTCACGCCCACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLLPLPG*SRPPGR
Trigger: CCGCCCAGGTGGGCGTGAGCATCCAGGCAGTGGTAG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCTACCACTGCCTGGATaGTCACGCCCACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWLPLPG*SRPPGR
Trigger: CCGCCCAGGTGGGCGTGAGCATCCAGGCAGTGGTAG...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCHLDHG*HLPGPS
Trigger: GGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCACCTCGATCATGGCTaGCATCTCCCCGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSHLDHG*HLPGPS
Trigger: GGAGGGCCCGGGGAGATGGCAGCCATGATCGAGGTG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACCCAAGGTCAGGAGCTaGCATGGGGCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSPKVRS*HGAPSS
Trigger: GGAGGAAGGGGCCCCATGGCAGCTCCTGACCTTGGG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCAGGGCCTTGCCTTCTaGAAGGTGTGCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGQGLAF*KVCLRV
Trigger: GACCCTCAGGCACACCTTGCAGAAGGCAAGGCCCTG...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCAGTGTGAGGGGCTTTaGCCAGAGTGGGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWQCEGL*PEWEPR
Trigger: CCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCCCCGCCGCGGCGCACCGAGTTGAGCACCGACACATCGTAGCTGGTGGTGTCAACAGATCGTGCCTGTaGGCTGAGGGATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GPAAAHRVEHRHIVAGGVNRSCL*AEGCFC
Trigger: ACAGAAACATCCCTCAGCCCACAGGCACGATCTGTT...GACACCACCAGCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCGGCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTGTGGGTGTCCCGTTaGGCAGGGTTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGLWVSR*AGLAPA
Trigger: AGCAGGTGCTAACCCTGCCCAACGGGACACCCACAG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCTGTGGGTGTCCCGTTaGGCAGGGTTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGLWVSR*AGLAPA
Trigger: AGCAGGTGCTAACCCTGCCCAACGGGACACCCACAG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGTGCCCGTGCGACTTGGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGCTCTTTTGGCGCCGGTaGGTGGGCAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LVPVRLGIPLSEMTTGRKLFWRR*VGSRLW
Trigger: CCACAGCCTGCTGCCCACCCACCGGCGCCAAAAGAG...CTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCGTGGTCTCCCACAGTaGGGTCGTCTGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAERGLPQ*GRLHPL
Trigger: CAGTGGATGCAGACGACCCCACTGTGGGAGACCACG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACGCCCACCTGGGCGGCCATATCCTCGCAGAAGGTGAACTCGCCCTGCTCGTTGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TPTWAAISSQKVNSPCSLTTGRK*TLVCSR
Trigger: CCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGT...CAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATATGGCCGCCCAGGTGGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSPRSAC*CPCDLA
Trigger: TGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLPRSAC*CPCDLA
Trigger: TGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVPRSAC*CPCDLA
Trigger: TGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCACACATCGTAGCTGGTaGTGTCCATCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGTHRSW*CPSRRR
Trigger: GCGGCGGCGAGATGGACACCACCAGCTACGATGTGT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCGACACATCGTAGCTaGTGGTGTCCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPTHRS*WCPSRR
Trigger: GCGGCGAGATGGACACCACCAGCTACGATGTGTCGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCCGACACATCGTAGCTaGTGGTGTCCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGPTHRS*WCPSRR
Trigger: GCGGCGAGATGGACACCACCAGCTACGATGTGTCGG...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGSSPRS*LPSPRA
Trigger: GGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGA...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDSSPRS*LPSPRA
Trigger: GGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGA...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGCCTGGAGAGGGGTTaGGGAGTGGTGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLGLERG*GVVGHL
Trigger: CAAGTGCCCCACCACTCCCCAACCCCTCTCCAGGCC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCTGCTGTCACAGAGATaGCTGAGGTCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSLLSQR*LRSPQP
Trigger: CGGCTGTGGGGACCTCAGTCATCTCTGTGACAGCAG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTCTGCTGTCACAGAGATaGCTGAGGTCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPLLSQR*LRSPQP
Trigger: CGGCTGTGGGGACCTCAGTCATCTCTGTGACAGCAG...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGYPRRR*TRPARC
Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATA...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGCGCGGCGCACCGAGTTaGGCACCGACACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQRGAPS*APTHRS
Trigger: GCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCG...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCCCCTTCCTCCCTCTTaGCAGGCCTGGAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCPLPPS*QAWRGV
Trigger: AACCCCTCTCCAGGCCTGTCAAGAGGGAGGAAGGGG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCCCCTTCCTCCCTCTTaGCAGGCCTGGAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLPLPPS*QAWRGV
Trigger: AACCCCTCTCCAGGCCTGTCAAGAGGGAGGAAGGGG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGTGATCTGTCACTCCTaGTCTCCACTGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGVICHS*SPLPLQ
Trigger: CTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCAC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCGTGGCCCTCACCCTGTaGTCTGTCACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPVALTL*SVTPDL
Trigger: GAGATCAGGAGTGACAGATCACAGGGTGAGGGCCAC...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCAATCCCTTGCAGTGTaGGGGGCTTTGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAEQSLAV*GALPRV
Trigger: CACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCGAGAGCCCACAGAGGTaGCCACACGGGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSESPQR*PHGCLQ
Trigger: CTGAAGACACCCGTGTGGGCACCTCTGTGGGCTCTC...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCCCCGCCGCGGCGCACCGAGTTGAGCACCGACACATCGTAGCTGGTGGTGTCTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GPAAAHRVEHRHIVAGGVYVLVY*GDLQDQ
Trigger: CTGGTCCTGCAGATCTCCGCAATAGACAAGGACATA...GACACCACCAGCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCGGCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCCTGCTCGTTGCACTTaGACACGGCCACGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLPARCT*TRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCCTGCTCGTTGCACTTaGACACGGCCACGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWPARCT*TRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACCTGCTCGTTGCACTTaGACACGGCCACGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPPARCT*TRPRSA
Trigger: CGCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAACTCGCCCTGCTCGTTaGACTTGCACACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPTRPAR*TCTRPR
Trigger: CCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCAACTCGCCCTGCTCGTTaGACTTGCACACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSTRPAR*TCTRPR
Trigger: CCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGT...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGTGCCCCAGGCGCGTaGCTCGGTGGCTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVCAPGA*LGGFCT
Trigger: GGTGCAGAAGCCACCGAGGCACGCGCCTGGGGCACA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCGGGCTGGGGAGTCACTaGCATTTTTGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCGLGSH*HFWRLW
Trigger: CCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCAGCTGTCCAGGCCTTTaGCTCCAGGCAGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPSCPGL*LQADRH
Trigger: GTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCT...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCGGCTCGGCTCCGTCATaGAGTCATGAGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCGSAPS*SHEWVW
Trigger: CCAAACCCACTCATGACTGCATGACGGAGCCGAGCC...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTCAGTGTGAGGGGCTTTaGCCAGAGTGGGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTQCEGL*PEWEPR
Trigger: CCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTG...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCATCCAATCTCTCTTTTaGCGCCGGTGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGIQSLF*RRWVGS
Trigger: GCTGCCCACCCACCGGCGCCAAAAGAGAGATTGGAT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTACATGACAGAGGCGTaGTCTCCCACAGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPYMTEA*SPTVGS
Trigger: CGACCCCACTGTGGGAGACCACGCCTCTGTCATGTA...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCCGCATCAGGGTCCATaGCCAGCACTGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGPHQGP*PALCQS
Trigger: TGATTGGCACAGTGCTGGCCATGGACCCTGATGCGG...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGTGGGCTGGTAGGGCTTaGCAAACTCCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGWAGRA*QTPGHC
Trigger: ACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCA...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAETTGRK*TLVCSR
Trigger: CCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGT...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGATGCTCACGCCCACCTaGGCGGCCATATCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVMLTPT*AAISSQ
Trigger: CTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCAT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSSSPRS*LPSPRA
Trigger: GGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGA...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCGGGGTTGGGGAGTGGTaGGGCACTTGGAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSGVGEW*GTWSGV
Trigger: TACTCCACTCCAAGTGCCCCACCACTCCCCAACCCC...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTTGTCACAGAGATGACTaGGGTCCCCACAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTCHRDD*GPHSRR
Trigger: TCGTCGGCTGTGGGGACCTCAGTCATCTCTGTGACA...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSYPRRR*TRPARC
Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATA...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCCTCCTCGTCGTAGGTaGCCAGCTGCTCGTGGATCT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCPPRRR*PAARGS
Trigger: AGATCCACGAGCAGCTGGTCACCTACGACGAGGAGG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCACGGCGGTCTGTGGGTaGCAGGGTTATGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSTAVCG*QGYVDV
Trigger: GACATCCACATAACCCTGTCACCCACAGACCGCCGT...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCATCCCGAGAGAGGGCATaGTGGTCAGTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSSRERA*WSVSLG
Trigger: CCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGA...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCCCTCTCTGTTGACTaGTGCCACTTCTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWPLSVD*CHFSKV
Trigger: CACCTTGGAGAAGTGGCATCAGTCAACAGAGAGGGG...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCCTGCCCCTCTCTGTTaGCTGATGCCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAEPAPLC*LMPLLQ
Trigger: TTGGAGAAGTGGCATCAGTCAACAGAGAGGGGCAGG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGATAGTTGCTTCAGTGTaGCGTGCCTGTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWIVASV*RACGLR
Trigger: CCTCAGCCCACAGGCACGTCACACTGAAGCAACTAT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAAGGGTTAGCACCTGCTaGTGCCACTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPRVSTC*CHCCHC
Trigger: GCAGTGGCAGCAGTGGCAGCAGCAGGTGCTAACCCT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGAGGGTTAGCACCTGCTaGTGCCACTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVRVSTC*CHCCHC
Trigger: GCAGTGGCAGCAGTGGCAGCAGCAGGTGCTAACCCT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCACGTCTCCTGTCTCTaGATCGACCCGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGHVSCL*IDPEDL
Trigger: AAGGTCTTCCGGGTCGATGCAGAGACAGGAGACGTG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCAGAGAGCCCACAGAGGTaGCCACACGGGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSESPQR*PHGCLQ
Trigger: CTGAAGACACCCGTGTGGGCACCTCTGTGGGCTCTC...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGAGTCGCCCCGCAAGATaGTGTACTTGGTCATCCGGT +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWSRPAR*CTWSSG
Trigger: ACCGGATGACCAAGTACAGCATCTTGCGGGGCGACT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTCTATTGCGGAGATCTaGAGGACCAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGSIAEI*RTSWPW
Trigger: CCATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGA...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGCGTGCTGGTGCCCGTaGGACTTGGCATCCCATTGT +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWACWCP*DLASHC
Trigger: ACAATGGGATGCCAAGTCGCACGGGCACCAGCACGC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAEKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTAGCTGTCCAGGCCTTTaGCTCCAGGCAGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTSCPGL*LQADRH
Trigger: GTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCT...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCCCAAGGTCAGGAGCTaGCATGGGGCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQPKVRS*HGAPSS
Trigger: GGAGGAAGGGGCCCCATGGCAGCTCCTGACCTTGGG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAAGGGGAGACGTCTTCTaGTCCGGGAACATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPRGDVF*SGNICP
Trigger: GGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCAGGGCCTTGCCTTCTaGAAGGTGTGCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCQGLAF*KVCLRV
Trigger: GACCCTCAGGCACACCTTGCAGAAGGCAAGGCCCTG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCAGGGCCTTGCCTTCTaGAAGGTGTGCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVQGLAF*KVCLRV
Trigger: GACCCTCAGGCACACCTTGCAGAAGGCAAGGCCCTG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCTGTGGGTGTCCCGTTaGGCAGGGTTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSLWVSR*AGLAPA
Trigger: AGCAGGTGCTAACCCTGCCCAACGGGACACCCACAG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACAGAGGACAAGTAGCTGTGGGCAGCAGGCTGTaGGTGTCCCGTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESCGAENKPSRPDRGQVAVGSRL*VSRWAG
Trigger: CCCTGCCCAACGGGACACCCACAGCCTGCTGCCCAC...AGCTACTTGTCCTCTGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCGTGGGCAGCAGGCTGTaGGTGTCCCGTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSVGSRL*VSRWAG
Trigger: CCCTGCCCAACGGGACACCCACAGCCTGCTGCCCAC...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGGGTCCAGCCTCTCAATaGCGAACACGTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGGPASQ*RTRLLS
Trigger: AGACAGGAGACGTGTTCGCCATTGAGAGGCTGGACC...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGTGGTCTCCCACAGTaGGGTCGTCTGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVRGLPQ*GRLHPL
Trigger: CAGTGGATGCAGACGACCCCACTGTGGGAGACCACG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCGTGGTCTCCCACAGTaGGGTCGTCTGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCRGLPQ*GRLHPL
Trigger: CAGTGGATGCAGACGACCCCACTGTGGGAGACCACG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTTACATGACAGAGGCGTaGTCTCCCACAGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTYMTEA*SPTVGS
Trigger: CGACCCCACTGTGGGAGACCACGCCTCTGTCATGTA...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCACGATCTCATACCTaGCCTGCTTCTCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPRSHT*PASLGP
Trigger: TGGACCGAGAGAAGCAGGCCAGGTATGAGATCGTGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACCCACGATCTCATACCTaGCCTGCTTCTCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDPRSHT*PASLGP
Trigger: TGGACCGAGAGAAGCAGGCCAGGTATGAGATCGTGG...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCACGATCTCATACCTaGCCTGCTTCTCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGPRSHT*PASLGP
Trigger: TGGACCGAGAGAAGCAGGCCAGGTATGAGATCGTGG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCACTGGCCCTTGTCACTaGTCCTGCGGATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGTGPCH*SCGWSI
Trigger: GATACTCCATCCGCAGGACCAGTGACAAGGGCCAGT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGTGACTCGGAAGAACTaGCCCTTGTCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGVTRKN*PLSLVL
Trigger: CAGGACCAGTGACAAGGGCCAGTTCTTCCGAGTCAC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGGACCAGCTGGCCATaGACAGCGTTCTCACACACT +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCRTSWP*TAFSHT
Trigger: AGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCCT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACAGGACCAGCTGGCCATaGACAGCGTTCTCACACACT +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDRTSWP*TAFSHT
Trigger: AGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCCT...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCACACATCGTAGCTGGTaGTGTCCATCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSTHRSW*CPSRRR
Trigger: GCGGCGGCGAGATGGACACCACCAGCTACGATGTGT...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLSSPRS*LPSPRA
Trigger: GGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGGGGTTGGGGAGTGGTaGGGCACTTGGAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCGVGEW*GTWSGV
Trigger: TACTCCACTCCAAGTGCCCCACCACTCCCCAACCCC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 72 bp GTCAGCGTGCTGGTGCCCGTGCGACTTGGCATCCCATaGTCTGAGATGACCACGGGTAGGAAGTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: VSVLVPVRLGIP*SEMTTGRKWTL
Trigger: CAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGGCACCAGCACGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCATGTCACAGAGATGACTaGGGTCCCCACAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSCHRDD*GPHSRR
Trigger: TCGTCGGCTGTGGGGACCTCAGTCATCTCTGTGACA...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGTTTGTCTCAATGGTaGAAGCGTCCTGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGGLSQW*KRPGSR
Trigger: GCGACTACCAGGACGCTTTCACCATTGAGACAAACC...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGSHCLR*PRVGSG
Trigger: TCCACTTCCTACCCGTGGTCATCTCAGACAATGGGA...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCATATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPYPRRR*TRPARC
Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATA...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTCGGTGCCCAGGGAGCTaGGGGACTCGGCTATGGACT +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFARCPGS*GTRLWT
Trigger: AGTCCATAGCCGAGTCCCTCAGCTCCCTGGGCACCG...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CGCATCAGGGTCCATGGCCAGCACTGTGCCAATCAGAGGCTTCTTCTGGTTTTCCACGTCAGAGTCGGATaGGTCGGTGCCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RIRVHGQHCANQRLLLVFHVRVG*VGAQGA
Trigger: AGCTCCCTGGGCACCGACTCATCCGACTCTGACGTG...GAAAACCAGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGGACCCTGATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGTGGTGCCTGGCGTCTaGCTGGCCTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTVVPGV*LAWAAG
Trigger: CCCTGCAGCCCAGGCCAGTCAGACGCCAGGCACCAC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGACGGCGGTCTGTGGGTaGCAGGGTTATGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVTAVCG*QGYVDV
Trigger: GACATCCACATAACCCTGTCACCCACAGACCGCCGT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGTCCCGAGAGAGGGCATaGTGGTCAGTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQSRERA*WSVSLG
Trigger: CCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGA...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGTGATCTGTCACTCCTaGTCTCCACTGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPVICHS*SPLPLQ
Trigger: CTGGAGGGGCAGTGGAGATCAGGAGTGACAGATCAC...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCAAACTGGAGGGGTGCTaGGGAGTCTCAAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGKLEGC*GVSKQG
Trigger: ACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTT...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGGATTGGCGACCAGGTaGGGCAGAGAAGGGGAGACG +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQGLATR*GREGET
Trigger: CGTCTCCCCTTCTCTGCCTCACCTGGTCGCCAATCC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGATTGGCGACCAGGTaGGGCAGAGAAGGGGAGACG +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEGLATR*GREGET
Trigger: CGTCTCCCCTTCTCTGCCTCACCTGGTCGCCAATCC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCCTGCCCCTCTCTGTTaGCTGATGCCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSPAPLC*LMPLLQ
Trigger: TTGGAGAAGTGGCATCAGTCAACAGAGAGGGGCAGG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTCAGAGCTGAACAGGTaGCATCACACCATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGSELNR*HHTIAG
Trigger: CCCAGCTATGGTGTGATGTCACCTGTTCAGCTCTGA...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539168.1
CDS-3UTR GCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGGAGAGCCCACAGAGGTaGCCACACGGGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLESPQR*PHGCLQ
Trigger: CTGAAGACACCCGTGTGGGCACCTCTGTGGGCTCTC...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTAGTCGCCCCGCAAGATaGTGTACTTGGTCATCCGGT +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTSRPAR*CTWSSG
Trigger: ACCGGATGACCAAGTACAGCATCTTGCGGGGCGACT...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGAGTATCCAATGCTATaGCTAGCCGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGEYPML*LAASGS
Trigger: GGACCCTGATGCGGCTAGGCATAGCATTGGATACTC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACCCTTGTCACTGGTCCTaGGGATGGAGTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDPCHWS*GWSIQC
Trigger: GCATTGGATACTCCATCCGCAGGACCAGTGACAAGG...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCAAGTGGACCTTGGTATaGTCCCGGTCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGKWTLV*SRSNCP
Trigger: TGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAAGTGGACCTTGGTATaGTCCCGGTCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGKWTLV*SRSNCP
Trigger: TGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCAAGTGGACCTTGGTATaGTCCCGGTCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGKWTLV*SRSNCP
Trigger: TGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTT...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCCGGTCAGCGTGCTGGTaGCCGTGCGACTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSRSACW*PCDLAS
Trigger: GGATGCCAAGTCGCACGGGCACCAGCACGCTGACCG...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFALTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCCCTTGGGAATGGGCTaGAGAGAATCCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWPLGMG*RESCPT
Trigger: TGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGG...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCCGTTCCAGTGGAAGATaGATGGGTGACCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPRSSGR*MGDHRG
Trigger: ACCTCTGTGGTCACCCATGCATCTTCCACTGGAACG...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGATGTTTCTGTTCCGTTaGACTGCCTGTCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGMFLFR*TACPSR
Trigger: CCTGGACGGACAGGCAGTCCAACGGAACAGAAACAT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGTGGGCAGCAGGCTGTaGGTGTCCCGTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWVGSRL*VSRWAG
Trigger: CCCTGCCCAACGGGACACCCACAGCCTGCTGCCCAC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGATCCAATCTCTCTTTTaGCGCCGGTGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWIQSLF*RRWVGS
Trigger: GCTGCCCACCCACCGGCGCCAAAAGAGAGATTGGAT...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPLVIRF*GSSGSS
Trigger: TGAGGACCCAGATGAGCCCCAGAACCGGATGACCAA...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPMMPSL*AGFVSM
Trigger: CATTGAGACAAACCCCGCCCACAACGAGGGCATCAT...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGTGTATCGGAGGTCGATaGTGGGGTCTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVCIGGR*WGLWPR
Trigger: TCGAGGCCACAGACCCCACCATCGACCTCCGATACA...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTGTATCGGAGGTCGATaGTGGGGTCTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLCIGGR*WGLWPR
Trigger: TCGAGGCCACAGACCCCACCATCGACCTCCGATACA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCATGTATCGGAGGTCGATaGTGGGGTCTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSCIGGR*WGLWPR
Trigger: TCGAGGCCACAGACCCCACCATCGACCTCCGATACA...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCACTGGTCCTGCGGATaGAGTATCCAATGCTATGCC +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAEHWSCG*SIQCYA
Trigger: GGCATAGCATTGGATACTCCATCCGCAGGACCAGTG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTACTGGCCCTTGTCACTaGTCCTGCGGATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTTGPCH*SCGWSI
Trigger: GATACTCCATCCGCAGGACCAGTGACAAGGGCCAGT...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGTGACTCGGAAGAACTaGCCCTTGTCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPVTRKN*PLSLVL
Trigger: CAGGACCAGTGACAAGGGCCAGTTCTTCCGAGTCAC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGCTGTGGGGGTTCCAGTaGAATCCAGTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAELWGFQ*NPVLWP
Trigger: AGGCCAAAGAACTGGATTCCACTGGAACCCCCACAG...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGCTGGTAGGGCTTaGCAAACTCCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCWAGRA*QTPGHC
Trigger: ACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCCGTTCTCACACACTTTaGGCTGGTAGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPRSHTL*AGRAWQ
Trigger: TTGCCAAGCCCTACCAGCCCAAAGTGTGTGAGAACG...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTATCTGCAGGACCAGCTaGCCATGGACAGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPICRTS*PWTAFS
Trigger: TGAGAACGCTGTCCATGGCCAGCTGGTCCTGCAGAT...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTATCTGCAGGACCAGCTaGCCATGGACAGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTICRTS*PWTAFS
Trigger: TGAGAACGCTGTCCATGGCCAGCTGGTCCTGCAGAT...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLTTGRK*TLVCSR
Trigger: CCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCGGATGCAGAGTAAGATaGCTACCACTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPGCRVR*LPLPGC
Trigger: GCATCCAGGCAGTGGTAGCCATCTTACTCTGCATCC...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGGATGCAGAGTAAGATaGCTACCACTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGGCRVR*LPLPGC
Trigger: GCATCCAGGCAGTGGTAGCCATCTTACTCTGCATCC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGGGATGCAGAGTAAGATaGCTACCACTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGGCRVR*LPLPGC
Trigger: GCATCCAGGCAGTGGTAGCCATCTTACTCTGCATCC...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAAGGCGCGTGCCTCGGTaGCTTCTGCACCTGCGCATA +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEERRVPR*LLHLRI
Trigger: TATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCT...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEETRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGAGTTGGAGCAGGGCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCGGTGACAGGGTTATGTaGATGTCTGAGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: WSWSRARAPERGHDGQSPGDRVM*MSEPRQ
Trigger: CTGTCTGGGCTCAGACATCCACATAACCCTGTCACC...GGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGCCCTGCTCCAACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGACTTGGAGTGGAGTATaGAGTTGGAGCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAETWSGV*SWSRAR
Trigger: CCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGT...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCGTGGGGCACTTGGAGTaGAGTATGGAGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSVGHLE*SMELEQ
Trigger: CTGCTCCAACTCCATACTCCACTCCAAGTGCCCCAC...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGAGTGGTGGGGCACTTaGAGTGGAGTATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPEWWGT*SGVWSW
Trigger: CCAACTCCATACTCCACTCCAAGTGCCCCACCACTC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACAAAGAGAGCATGGATTaGCGACCAGGTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDKESMD*RPGEAE
Trigger: CTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTT...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAGGTGTAAAGACACATaGCTCGGCTCCGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGRCKDT*LGSVMQ
Trigger: CTGCATGACGGAGCCGAGCCATGTGTCTTTACACCT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACTGCTGTCACAGAGATaGCTGAGGTCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEELLSQR*LRSPQP
Trigger: CGGCTGTGGGGACCTCAGTCATCTCTGTGACAGCAG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGTATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQYPRRR*TRPARC
Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATA...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TTCGTGGTGTTATGTCCTTGTCTATTGCGGAGATCTGCAGGACCAGCTGGCCATCGCGGCGCACCGAGTTaGGCACCGACACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: FVVLCPCLLRRSAGPAGHRGAPS*APTHRS
Trigger: GCTACGATGTGTCGGTGCTCAACTCGGTGCGCCGCG...ATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGACAAGGACATAACACCACGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVARGSL*VRRRSV
Trigger: CACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGC...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGCCAGAGGAAGTCTTTaGGTTAGACGGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCARGSL*VRRRSV
Trigger: CACAGACCGCCGTCTAACTCAAAGACTTCCTCTGGC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGTCCCGAGAGAGGGCATaGTGGTCAGTCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQSRERA*WSVSLG
Trigger: CCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGA...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTAAACTGGAGGGGTGCTaGGGAGTCTCAAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPKLEGC*GVSKQG
Trigger: ACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTT...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGTCCGTCATGCAGTCATaGGTGGGTTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAESVMQS*VGLDIV
Trigger: GACAATGTCCAAACCCACTCATGACTGCATGACGGA...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCCCTCTCTGTTGACTaGTGCCACTTCTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVPLSVD*CHFSKV
Trigger: CACCTTGGAGAAGTGGCATCAGTCAACAGAGAGGGG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCCTGCCCCTCTCTGTTaGCTGATGCCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSPAPLC*LMPLLQ
Trigger: TTGGAGAAGTGGCATCAGTCAACAGAGAGGGGCAGG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWSIMSL*IFPGGT
Trigger: TGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCACGTCTCCTGTCTCTaGATCGACCCGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLHVSCL*IDPEDL
Trigger: AAGGTCTTCCGGGTCGATGCAGAGACAGGAGACGTG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACACGTCTCCTGTCTCTaGATCGACCCGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPHVSCL*IDPEDL
Trigger: AAGGTCTTCCGGGTCGATGCAGAGACAGGAGACGTG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCGCATTGAACAACCGATaGGTGAACACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGALNNR*VNTGQL
Trigger: CAACTGGCCTGTGTTCACGCATCGGTTGTTCAATGC...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGGCATTGAACAACCGATaGGTGAACACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWALNNR*VNTGQL
Trigger: CAACTGGCCTGTGTTCACGCATCGGTTGTTCAATGC...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCACAGTGGGGTCGTCTaGATCCACTGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLHSGVV*IHCCHR
Trigger: TCTGTGACAGCAGTGGATGCAGACGACCCCACTGTG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCACAGTGGGGTCGTCTaGATCCACTGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCHSGVV*IHCCHR
Trigger: TCTGTGACAGCAGTGGATGCAGACGACCCCACTGTG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACACAGTGGGGTCGTCTaGATCCACTGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSHSGVV*IHCCHR
Trigger: TCTGTGACAGCAGTGGATGCAGACGACCCCACTGTG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGAGTCGCCCCGCAAGATaGTGTACTTGGTCATCCGGT +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWSRPAR*CTWSSG
Trigger: ACCGGATGACCAAGTACAGCATCTTGCGGGGCGACT...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCATCTATTGCGGAGATCTaGAGGACCAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPSIAEI*RTSWPW
Trigger: CCATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGA...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGTGCTCCCGGTCAAACTaGCCATACTTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAECSRSN*PYLTVM
Trigger: CATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCA...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTGCTCCCGGTCAAACTaGCCATACTTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGCSRSN*PYLTVM
Trigger: CATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCA...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCTGCTCCCGGTCAAACTaGCCATACTTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCCSRSN*PYLTVM
Trigger: CATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCA...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGCGTGCTGGTGCCCGTaGGACTTGGCATCCCATTGT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQACWCP*DLASHC
Trigger: ACAATGGGATGCCAAGTCGCACGGGCACCAGCACGC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCGGTCAGCGTGCTGGTaGCCGTGCGACTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWRSACW*PCDLAS
Trigger: GGATGCCAAGTCGCACGGGCACCAGCACGCTGACCG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTCGGAAGAACTGGCCCTTGTCACTGGTCCTGCGGATGGAGTATCCAATGCTATACTCGCCCTGCTCGTTaGACTTGCACACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LGRTGPCHWSCGWSIQCYTRPAR*TCTRPR
Trigger: CCGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGT...ATAGCATTGGATACTCCATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCCCACGAGGAAGGGGTaGTGGGCTGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWPTRKG*WAGESL
Trigger: CAGTGACTCCCCAGCCCAGCACCCCTTCCTCGTGGG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGGCTGCAGAGAATCCTaGCCCACAAGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCGCRES*PTSQAV
Trigger: GACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCTCTTTTGGCGCCGGTaGGTGGGCAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWLFWRR*VGSRLW
Trigger: CCACAGCCTGCTGCCCACCCACCGGCGCCAAAAGAG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TCAAGGCCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACCATGCTAGGTGGCCACGATCTCATACCTaGCCTGCTTCTCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRPDRGQVALDAQDHARWPRSHT*PASLGP
Trigger: TGGACCGAGAGAAGCAGGCCAGGTATGAGATCGTGG...CCACCTAGCATGGTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGGTTCTGGGGCTCATCTaGGTCCTCAACAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWVLGLI*VLNKQR
Trigger: TCTCTGTTTGTTGAGGACCCAGATGAGCCCCAGAAC...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCATTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPLVIRF*GSSGSS
Trigger: TGAGGACCCAGATGAGCCCCAGAACCGGATGACCAA...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGCCGCATCAGGGTCCATaGCCAGCACTGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLPHQGP*PALCQS
Trigger: TGATTGGCACAGTGCTGGCCATGGACCCTGATGCGG...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGCCGCATCAGGGTCCATaGCCAGCACTGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQPHQGP*PALCQS
Trigger: TGATTGGCACAGTGCTGGCCATGGACCCTGATGCGG...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCACTGGCCCTTGTCACTaGTCCTGCGGATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSTGPCH*SCGWSI
Trigger: GATACTCCATCCGCAGGACCAGTGACAAGGGCCAGT...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGTGACTCGGAAGAACTaGCCCTTGTCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWVTRKN*PLSLVL
Trigger: CAGGACCAGTGACAAGGGCCAGTTCTTCCGAGTCAC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGATCTGCAGGACCAGCTaGCCATGGACAGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVICRTS*PWTAFS
Trigger: TGAGAACGCTGTCCATGGCCAGCTGGTCCTGCAGAT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACGTAGGAAGTGGACCTTaGTATGCTCCCGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDVGSGP*YAPGQT
Trigger: AGTTTGACCGGGAGCATACCAAGGTCCACTTCCTAC...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACCGACACATCGTAGCTaGTGGTGTCCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEPTHRS*WCPSRR
Trigger: GCGGCGAGATGGACACCACCAGCTACGATGTGTCGG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCAGGCGCGTGCCTCGGTaGCTTCTGCACCTGCGCATA +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSRRVPR*LLHLRI
Trigger: TATGCGCAGGTGCAGAAGCCACCGAGGCACGCGCCT...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPSLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSSLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGMVSLP*EWAAEN
Trigger: ATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCAT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCGTGGGGCACTTGGAGTaGAGTATGGAGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCVGHLE*SMELEQ
Trigger: CTGCTCCAACTCCATACTCCACTCCAAGTGCCCCAC...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGTACAGCACAGTTACTaGCATGGCAGGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLVQHSY*HGRPVR
Trigger: CCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTAC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACCAGTGGAAGATGCATaGGTGACCACAGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSPVEDA*VTTEVG
Trigger: CCCAACCTCTGTGGTCACCCATGCATCTTCCACTGG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCCAGTGGAAGATGCATaGGTGACCACAGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCPVEDA*VTTEVG
Trigger: CCCAACCTCTGTGGTCACCCATGCATCTTCCACTGG...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCTGTCATGCACCAGTTTaGCCAATATATAGACATTAT +
Preference number: 4 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRCHAPV*PIYRHY
Trigger: ATAATGTCTATATATTGGCCAAACTGGTGCATGACA...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGTCAGCCGACCGTCTTTaGAGGGGAGCCACACCCCGC +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWSADRL*RGATPR
Trigger: GCGGGGTGTGGCTCCCCTCCAAAGACGGTCGGCTGA...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR CCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTGTGAGTGGAGCTCTGTaGAGCCTGTCAGCCGACCGT +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVVSGAL*SLSADR
Trigger: ACGGTCGGCTGACAGGCTCCACAGAGCTCCACTCAC...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR TCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGTCACAGAGATGACTaGGGTCCCCACAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVCHRDD*GPHSRR
Trigger: TCGTCGGCTGTGGGGACCTCAGTCATCTCTGTGACA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCATCAGGATTTGGTACATaGCAGAGGCGTGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSSGFGT*QRRGLP
Trigger: TGGGAGACCACGCCTCTGTCATGTACCAAATCCTGA...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGTTTGTCTCAATGGTaGAAGCGTCCTGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLGLSQW*KRPGSR
Trigger: GCGACTACCAGGACGCTTTCACCATTGAGACAAACC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGGTTTGTCTCAATGGTaGAAGCGTCCTGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWGLSQW*KRPGSR
Trigger: GCGACTACCAGGACGCTTTCACCATTGAGACAAACC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGTCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWSHCLR*PRVGSG
Trigger: TCCACTTCCTACCCGTGGTCATCTCAGACAATGGGA...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAATATCCTCGCAGAAGGTaGACTCGCCCTGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEYPRRR*TRPARC
Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGCGAGGATA...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTACGGCGGTCTGTGGGTaGCAGGGTTATGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVTAVCG*QGYVDV
Trigger: GACATCCACATAACCCTGTCACCCACAGACCGCCGT...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCGGGAACCTCGGTCCATaGCGAAGGGTGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSGNLGP*RRVSLV
Trigger: CACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCC...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAAGGGGCCTCTGGTGTGTCGTCTGATTGGTTGCTTTCTTGACTGTCAGATCGCCAGTTCCCCTCTCTaGGTCCTGGCCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: VKGPLVCRLIGCFLDCQIASSPL*VLASDQ
Trigger: CTGGTCTGAGGCCAGGACTCAGAGAGGGGAACTGGC...GATCTGACAGTCAAGAAAGCAACCAATCAGACGACACACCAGAGGCCCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACTTGTGTTGGTTGTGTaGCCTTGGACTGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPLVLVV*PWTGCT
Trigger: TGTGCAGCCAGTCCAAGGTCACACAACCAACACAAG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGTTGTCATTGATGTCTTaGAGAGTGACCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAELSLMS*RVTSTV
Trigger: CACCGTGCTGGTCACTCTGCAAGACATCAATGACAA...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACCATGGCCAGCACTGTaGCAATCAGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPPWPAL*QSEASS
Trigger: AGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGAGTATCCAATGCTATaGCTAGCCGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLEYPML*LAASGS
Trigger: GGACCCTGATGCGGCTAGGCATAGCATTGGATACTC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCTTGTCACTGGTCCTaGGGATGGAGTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVPCHWS*GWSIQC
Trigger: GCATTGGATACTCCATCCGCAGGACCAGTGACAAGG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWYVLVY*GDLQDQ
Trigger: CTGGTCCTGCAGATCTCCGCAATAGACAAGGACATA...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDYVLVY*GDLQDQ
Trigger: CTGGTCCTGCAGATCTCCGCAATAGACAAGGACATA...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCYVLVY*GDLQDQ
Trigger: CTGGTCCTGCAGATCTCCGCAATAGACAAGGACATA...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTGCTCCCGGTCAAACTaGCCATACTTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSCSRSN*PYLTVM
Trigger: CATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCA...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGAAGTGGACCTTGGTATaGTCCCGGTCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLKWTLV*SRSNCP
Trigger: TGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGTCTCCGGCACGCTCTTaGCGTGCGCGCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRSPARS*RARGPA
Trigger: AGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGA...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACAAACACAGTCTGTTTTaGTTTGCAGCCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDKHSLF*FAALGS
Trigger: GCTCCCCAAGGCTGCAAAGCAAAACAGACTGTGTTT...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCACTCCTGATCTCCACTaGCCCTCCAGAATGAATTCA +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCTPDLH*PSRMNS
Trigger: TGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACGTTCCAGTGGAAGATaGATGGGTGACCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPRSSGR*MGDHRG
Trigger: ACCTCTGTGGTCACCCATGCATCTTCCACTGGAACG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCTCTCCAAGGTGTGTTTaGAGTGAAACGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCSPRCV*SETFQW
Trigger: CCACTGGAACGTTTCACTGCAAACACACCTTGGAGA...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGATGTTTCTGTTCCGTTaGACTGCCTGTCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWMFLFR*TACPSR
Trigger: CCTGGACGGACAGGCAGTCCAACGGAACAGAAACAT...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTTTCCCCTTCAGGATTTaGTACATGACAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPFPFRI*YMTEAW
Trigger: CCACGCCTCTGTCATGTACCAAATCCTGAAGGGGAA...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCACTGGTCCTGCGGATaGAGTATCCAATGCTATGCC +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWHWSCG*SIQCYA
Trigger: GGCATAGCATTGGATACTCCATCCGCAGGACCAGTG...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCACTGGTCCTGCGGATaGAGTATCCAATGCTATGCC +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVHWSCG*SIQCYA
Trigger: GGCATAGCATTGGATACTCCATCCGCAGGACCAGTG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCTGGAATCCAGTTCTTTaGCCTCCACAGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: SSRGSEPYSSASILNLGPWNPVL*PPQSGY
Trigger: ATAACCTGACTGTGGAGGCCAAAGAACTGGATTCCA...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCTGTGGGGGTTCCAGTaGAATCCAGTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLLWGFQ*NPVLWP
Trigger: AGGCCAAAGAACTGGATTCCACTGGAACCCCCACAG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACTGTGGGGGTTCCAGTaGAATCCAGTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPLWGFQ*NPVLWP
Trigger: AGGCCAAAGAACTGGATTCCACTGGAACCCCCACAG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCGTGCGACTTGGCATCCCATTGTCTGAGATGACCACGGGTAGGAAGTGGACCCGTTCTCACACACTTTaGGCTGGTAGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PVRLGIPLSEMTTGRKWTRSHTL*AGRAWQ
Trigger: TTGCCAAGCCCTACCAGCCCAAAGTGTGTGAGAACG...GGTCCACTTCCTACCCGTGGTCATCTCAGACAATGGGATGCCAAGTCGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCACGTTCTCACACACTTTaGGCTGGTAGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSRSHTL*AGRAWQ
Trigger: TTGCCAAGCCCTACCAGCCCAAAGTGTGTGAGAACG...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGTAGGAAGTGGACCTTaGTATGCTCCCGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPVGSGP*YAPGQT
Trigger: AGTTTGACCGGGAGCATACCAAGGTCCACTTCCTAC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGACCACGGGTAGGAAGTaGACCTTGGTATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQTTGRK*TLVCSR
Trigger: CCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGT...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAGGCAGAGAAGGGGAGACGTCTTCTGCTCCGGGAACATCTGCCCCTTCTCAGGATGCAGAGTAAGATaGCTACCACTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: VRQRRGDVFCSGNICPFSGCRVR*LPLPGC
Trigger: GCATCCAGGCAGTGGTAGCCATCTTACTCTGCATCC...TGAGAAGGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCTTCTCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGTGATGTTGATAATGACCTGGGCTCTGTTTCCCGCGGGAGGGCTCATGTATCGACACATCGTAGCTGGTaGTGTCCATCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CDVDNDLGSVSRGRAHVSTHRSW*CPSRRR
Trigger: GCGGCGGCGAGATGGACACCACCAGCTACGATGTGT...CGATACATGAGCCCTCCCGCGGGAAACAGAGCCCAGGTCATTATCAACATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGTGACAGGGTTATGTaGATGTCTGAGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLGDRVM*MSEPRQ
Trigger: CTGTCTGGGCTCAGACATCCACATAACCCTGTCACC...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGA +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCLDGGL*VTGLCG
Trigger: TCCACATAACCCTGTCACCCACAGACCGCCGTCTAA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTTTGCTTTGCAGCCTTaGGGAGCCAGAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSFALQP*GARGSL
Trigger: AAGACTTCCTCTGGCTCCCCAAGGCTGCAAAGCAAA...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAAGTGGAGTATGGAGTTaGAGCAGGGCTAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEESGVWS*SRARAP
Trigger: GGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACT...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPLLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGAAAGAGAGCATGGATTaGCGACCAGGTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLKESMD*RPGEAE
Trigger: CTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAAAAGAAAGAGAGCATaGATTGGCGACCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCKRKRA*IGDQVR
Trigger: CCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGAGTGTGACGTGCCTGTaGGCTGAGGGATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVSVTCL*AEGCFC
Trigger: ACAGAAACATCCCTCAGCCCACAGGCACGTCACACT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649567.1
3UTR CAA 72 bp GGCAGGTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTaGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GRSRCQAAKCKS*GFWSCLCHFPC
Trigger: ACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGACCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp TCCTCCCGGGGGTCCGAGCCGTACAGCTCAGCCAGCATCTTAAACCTGGGTCCCTACATGATGGGGAAGTaGGGTGTTTTTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSRGSEPYSSASILNLGPYMMGK*GVFLFI
Trigger: GATGAAGAGAAAAACACCTCACTTCCCCATCATGTA...GGGACCCAGGTTTAAGATGCTGGCTGAGCTGTACGGCTCGGACCCCCGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGCTTGCGACTCACGCTTaGCTTGATCTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLLATHA*LDLAYM
Trigger: CATGTAGGCAAGATCAAGTCAAGCGTGAGTCGCAAG...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCACATATTCTCCTTTaGGCAGGTACTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPHILL*AGTWHS
Trigger: AGAATGCCAAGTACCTGCTCAAAGGAGAATATGTGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTCCCCAGGCCCAGAGTaGCCTCGGCCGCCTAATACA +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTSPGPE*PRPPNT
Trigger: TGTATTAGGCGGCCGAGGTCACTCTGGGCCTGGGGA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAGAGACTGCCCCTCCAGAATaGATTCACAGTTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GLPREGMMVSLPWEWAAETAPPE*IHSCFK
Trigger: TTTGAAGCAACTGTGAATTCATTCTGGAGGGGCAGT...CTCTGCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTGTGGCCCTCACCCTGTaGTCTGTCACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFAVALTL*SVTPDL
Trigger: GAGATCAGGAGTGACAGATCACAGGGTGAGGGCCAC...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGAAACTGGAGGGGTGCTaGGGAGTCTCAAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQKLEGC*GVSKQG
Trigger: ACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTT...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACCCCTCTCTGTTGACTaGTGCCACTTCTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEPLSVD*CHFSKV
Trigger: CACCTTGGAGAAGTGGCATCAGTCAACAGAGAGGGG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPSIMSL*IFPGGT
Trigger: TGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLSIMSL*IFPGGT
Trigger: TGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCATCTCATACCTGGCCTaGTTCTCTCGGTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCISYLA*FSRSKL
Trigger: AAGCTTGGACCGAGAGAAGCAGGCCAGGTATGAGAT...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGCCATGGCCAGCACTGTaGCAATCAGAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLPWPAL*QSEASS
Trigger: AGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGG...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGAAGTGGACCTTGGTATaGTCCCGGTCAAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQKWTLV*SRSNCP
Trigger: TGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTT...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGCTACCACTGCCTGGATaGTCACGCCCACCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMLPLPG*SRPPGR
Trigger: CCGCCCAGGTGGGCGTGAGCATCCAGGCAGTGGTAG...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCTCTCCGGCACGCTCTTaGCGTGCGCGCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFASPARS*RARGPA
Trigger: AGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGA...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCAGCTGTCCAGGCCTTTaGCTCCAGGCAGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSSCPGL*LQADRH
Trigger: GTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCT...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGCTGCAGAGAATCCTaGCCCACAAGTCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEGCRES*PTSQAV
Trigger: GACAGCTTGACTTGTGGGGCAGGATTCTCTGCAGCC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGGCTCGGCTCCGTCATaGAGTCATGAGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGGSAPS*SHEWVW
Trigger: CCAAACCCACTCATGACTGCATGACGGAGCCGAGCC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGTCTGAGACCATCAGATaGACTTTCAGAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGSETIR*TFRAEQ
Trigger: CTGTTCAGCTCTGAAAGTGCATCTGATGGTCTCAGA...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539168.1
CDS-3UTR GCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGCCAGGCAGGTCAAGATaGCAGGCTGCCAAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKPGRSR*QAAKCK
Trigger: CTTGCACTTGGCAGCCTGGCATCTTGACCTGCCTGG...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGAACAGATCGTGCCTGTaGGCTGAGGGATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLNRSCL*AEGCFC
Trigger: ACAGAAACATCCCTCAGCCCACAGGCACGATCTGTT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGGTCCAGCCTCTCAATaGCGAACACGTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQGPASQ*RTRLLS
Trigger: AGACAGGAGACGTGTTCGCCATTGAGAGGCTGGACC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTTCCCCTTCAGGATTTaGTACATGACAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCFPFRI*YMTEAW
Trigger: CCACGCCTCTGTCATGTACCAAATCCTGAAGGGGAA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACCTCACCAGCCTTACCAGGGCGTTCAGGGACCCTAGAAAAAGACCCTGCAGCTTCCCCTTCAGGATTTaGTACATGACAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DLTSLTRAFRDPRKRPCSFPFRI*YMTEAW
Trigger: CCACGCCTCTGTCATGTACCAAATCCTGAAGGGGAA...GCTGCAGGGTCTTTTTCTAGGGTCCCTGAACGCCCTGGTAAGGCTGGTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCAATGTGTACTTGGTCTaGGTGAAGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCNVYLV*VKKGKL
Trigger: CAACTTCCCCTTCTTCACCCAGACCAAGTACACATT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGAATGTGTACTTGGTCTaGGTGAAGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWNVYLV*VKKGKL
Trigger: CAACTTCCCCTTCTTCACCCAGACCAAGTACACATT...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGGTTCTGGGGCTCATCTaGGTCCTCAACAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWVLGLI*VLNKQR
Trigger: TCTCTGTTTGTTGAGGACCCAGATGAGCCCCAGAAC...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGAATAAGCCTTCAAGGCCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ENKPSRPDRGQVALDAQDLVIRF*GSSGSS
Trigger: TGAGGACCCAGATGAGCCCCAGAACCGGATGACCAA...GTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGGCCTTGAAGGCTTATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQLVIRF*GSSGSS
Trigger: TGAGGACCCAGATGAGCCCCAGAACCGGATGACCAA...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCTGGAATCCAGTTCTTTaGCCTCCACAGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGWNPVL*PPQSGY
Trigger: ATAACCTGACTGTGGAGGCCAAAGAACTGGATTCCA...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGTGGAATCCAGTTCTTTaGCCTCCACAGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWWNPVL*PPQSGY
Trigger: ATAACCTGACTGTGGAGGCCAAAGAACTGGATTCCA...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCTGGGCTGGTAGGGCTTaGCAAACTCCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSWAGRA*QTPGHC
Trigger: ACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCA...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGACACATCGTAGCTGGTaGTGTCCATCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWTHRSW*CPSRRR
Trigger: GCGGCGGCGAGATGGACACCACCAGCTACGATGTGT...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGAGTGGTGGGGCACTTaGAGTGGAGTATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEEWWGT*SGVWSW
Trigger: CCAACTCCATACTCCACTCCAAGTGCCCCACCACTC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTGAGTGGTGGGGCACTTaGAGTGGAGTATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVEWWGT*SGVWSW
Trigger: CCAACTCCATACTCCACTCCAAGTGCCCCACCACTC...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGGGTGGGTGTGGAGGTaGCCCTCACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTGWVWR*PSPCDL
Trigger: CAGATCACAGGGTGAGGGCCACCTCCACACCCACCC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDSCSHE*VWTLSS
Trigger: ACTGGACAATGTCCAAACCCACTCATGACTGCATGA...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGTTCTGGGGCTCATCTaGGTCACGTCTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEVLGLI*VTSPVS
Trigger: AGAGACAGGAGACGTGACCCAGATGAGCCCCAGAAC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGCTTCTACCTTGTGTTaGTTGTGTGACCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPASTLC*LCDLGL
Trigger: CAGTCCAAGGTCACACAACCAACACAAGGTAGAAGC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649567.1
CDS-3UTR TCA 90 bp AGGACCAGGTTAGGCCACGAACATGAGTTATCTGAGAGTGGGGGTTATCAGTGTCTGCTGTCACAGAGATaGCTGAGGTCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: RTRLGHEHELSESGGYQCLLSQR*LRSPQP
Trigger: CGGCTGTGGGGACCTCAGTCATCTCTGTGACAGCAG...ACACTGATAACCCCCACTCTCAGATAACTCATGTTCGTGGCCTAACCTGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCAGGGTTAGCACCTGCTaGTGCCACTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTRVSTC*CHCCHC
Trigger: GCAGTGGCAGCAGTGGCAGCAGCAGGTGCTAACCCT...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGGCATTGAACAACCGATaGGTGAACACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLALNNR*VNTGQL
Trigger: CAACTGGCCTGTGTTCACGCATCGGTTGTTCAATGC...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGCACAGTGGGGTCGTCTaGATCCACTGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKHSGVV*IHCCHR
Trigger: TCTGTGACAGCAGTGGATGCAGACGACCCCACTGTG...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGAGTCGCCCCGCAAGATaGTGTACTTGGTCATCCGGT +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKSRPAR*CTWSSG
Trigger: ACCGGATGACCAAGTACAGCATCTTGCGGGGCGACT...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGAGTATCCAATGCTATaGCTAGCCGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEEYPML*LAASGS
Trigger: GGACCCTGATGCGGCTAGGCATAGCATTGGATACTC...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTTCTATTGCGGAGATCTaGAGGACCAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFASIAEI*RTSWPW
Trigger: CCATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGA...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR GCA 90 bp TGTGATGTTGATAATGACCTGGGCTCTGTTTCCCGCGGGAGGGCTCATGTATCGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 4 (lower is better)
Translates to: CDVDNDLGSVSRGRAHVSKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...CGATACATGAGCCCTCCCGCGGGAAACAGAGCCCAGGTCATTATCAACATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCCTGACTGGCCTGGGCTaGAGGGGGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVLTGLG*RGFGSP
Trigger: TGGGGACCCAAACCCCCTGCAGCCCAGGCCAGTCAG...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGAAACACAGTCTGTTTTaGTTTGCAGCCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWKHSLF*FAALGS
Trigger: GCTCCCCAAGGCTGCAAAGCAAAACAGACTGTGTTT...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCCCTTGGGAATGGGCTaGAGAGAATCCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWPLGMG*RESCPT
Trigger: TGTGGGGCAGGATTCTCTGCAGCCCATTCCCAAGGG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCCTGAATGTGGTTCAGTaGTCAGTACAGCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSLNVVQ*SVQHSY
Trigger: GTAACTGTGCTGTACTGAGCACTGAACCACATTCAG...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACACCTTACCCAATGCTATaGCTAGCCGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTPYPML*LAASGS
Trigger: GGACCCTGATGCGGCTAGGCATAGCATTGGGTAAGG...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACAGTCAAGATGCCAGGCTaGCAAGTGCAAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTVKMPG*QVQELG
Trigger: CCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGTCTATTGCGGAGATCTaGAGGACCAGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQSIAEI*RTSWKW
Trigger: CCACTTCCAGCTGGTCCTGCAGATCTCCGCAATAGA...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGCTCTTTTGGCGCCGGTaGGTGGGCAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRLFWRR*VGSRLW
Trigger: CCACAGCCTGCTGCCCACCCACCGGCGCCAAAAGAG...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAAGGGGCCTCTGGTGTGTCGTCTGATTGGTTGCTTTCTTGACTGTCAGATCATCCAATCTCTCTTTTaGCGCCGGTGGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VKGPLVCRLIGCFLDCQIIQSLF*RRWVGS
Trigger: GCTGCCCACCCACCGGCGCCAAAAGAGAGATTGGAT...GATCTGACAGTCAAGAAAGCAACCAATCAGACGACACACCAGAGGCCCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGGTCCAGCCTCTCAATaGCGAACACGTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGGPASQ*RTRLLS
Trigger: AGACAGGAGACGTGTTCGCCATTGAGAGGCTGGACC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTATGACAGCAGTGAGGTaGTACTCTGAGATATTCTCC +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTMTAVR*YSEIFS
Trigger: GGAGAATATCTCAGAGTACCACCTCACTGCTGTCAT...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGGTTCTGGGGCTCATCTaGGTCCTCAACAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLVLGLI*VLNKQR
Trigger: TCTCTGTTTGTTGAGGACCCAGATGAGCCCCAGAAC...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGTGTATCGGAGGTCGATaGTGGGGTCTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWCIGGR*WGLWPR
Trigger: TCGAGGCCACAGACCCCACCATCGACCTCCGATACA...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGAAGGCTGCTGGAAAATaGGGGGCTCGTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGKAAGK*GARPHL
Trigger: CAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTT...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTATCAGAGGCTTCTTCTaGTTTTCCTTCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPIRGFF*FSFSWK
Trigger: CTTCCAGCTGAAGGAAAACCAGAAGAAGCCTCTGAT...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGTGTGGACTTGCACAATaGATTCTTTTCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVCGLAQ*ILFLWG
Trigger: CCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACA...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGATGCTCACGCCCACCTaGGCGGCCATATCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMMLTPT*AAISSQ
Trigger: CTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCAT...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCCGACACATCGTAGCTaGTGGTGTCCATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTPTHRS*WCPSRR
Trigger: GCGGCGAGATGGACACCACCAGCTACGATGTGTCGG...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGTGCCTGGCGTCTGACTaGCCTGGGCTGCAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRCLASD*PGLQGV
Trigger: AACCCCCTGCAGCCCAGGCCAGTCAGACGCCAGGCA...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGATATTTCAGGAACCTaGAGTTTGCTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPDISGT*SLLSQG
Trigger: GCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATC...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGA +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVLDGGL*VTGLCG
Trigger: TCCACATAACCCTGTCACCCACAGACCGCCGTCTAA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGGGGTTGGGGAGTGGTaGGGCACTTGGAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTGVGEW*GTWSGV
Trigger: TACTCCACTCCAAGTGCCCCACCACTCCCCAACCCC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGCAGAGGGGGTGGGTGTaGAGGTGGCCCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRQRGWV*RWPSPC
Trigger: ACAGGGTGAGGGCCACCTCCACACCCACCCCCTCTG...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGCTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQLLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGSHEWV*TLSSFA
Trigger: AGCAAAACTGGACAATGTCCAAACCCACTCATGACT...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGSHEWV*TLSSFA
Trigger: AGCAAAACTGGACAATGTCCAAACCCACTCATGACT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGGGCTTTGCCCAGAGTaGGAACCTCGGTCCATGACG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTGLCPE*EPRSMT
Trigger: CGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGTTGATCTTGCCTACATaGTGGGGAAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLLILPT*WGSEVF
Trigger: AAACACCTCACTTCCCCATCATGTAGGCAAGATCAA...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGTTGATCTTGCCTACATaGTGGGGAAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWLILPT*WGSEVF
Trigger: AAACACCTCACTTCCCCATCATGTAGGCAAGATCAA...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGGCCACATATTCTCCTTTaGGCAGGTACTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FAIPRLMRSLGPTRKGCWPHILL*AGTWHS
Trigger: AGAATGCCAAGTACCTGCTCAAAGGAGAATATGTGG...CCAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCCACATATTCTCCTTTaGGCAGGTACTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVPHILL*AGTWHS
Trigger: AGAATGCCAAGTACCTGCTCAAAGGAGAATATGTGG...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTTGTCGTTCACGTCATaGACTTTGATGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EFAIPRLMRSLGPTRKGCLSFTS*TLMVKL
Trigger: CAGCTTCACCATCAAAGTTCATGACGTGAACGACAA...GCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGGGTTTGTCTCAATGGTaGAAGCGTCCTGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKGLSQW*KRPGSR
Trigger: GCGACTACCAGGACGCTTTCACCATTGAGACAAACC...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGTGATGTTGATAATGACCTGGGCTCTGTTTCCCGCGGGAGGGCTCATGTATCGTCCCATTGTCTGAGATaGCCACGGGTAGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: CDVDNDLGSVSRGRAHVSSHCLR*PRVGSG
Trigger: TCCACTTCCTACCCGTGGTCATCTCAGACAATGGGA...CGATACATGAGCCCTCCCGCGGGAAACAGAGCCCAGGTCATTATCAACATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAACTGCCCCTCCAGAATaGATTCACAGTTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPTAPPE*IHSCFK
Trigger: TTTGAAGCAACTGTGAATTCATTCTGGAGGGGCAGT...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTCCGTCATGCAGTCATaGGTGGGTTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVSVMQS*VGLDIV
Trigger: GACAATGTCCAAACCCACTCATGACTGCATGACGGA...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGAAGGTGTGTTTGCAGTaGAACGTTCCAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GVCYPKADEVSGTHEEGVKVCLQ*NVPVED
Trigger: ATCTTCCACTGGAACGTTTCACTGCAAACACACCTT...CACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGGGGAACCTCGGTCCATaGCGAAGGGTGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMGNLGP*RRVSLV
Trigger: CACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCC...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGTGCCACGTCTCCTGTCTCTaGATCGACCCGGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: KCKSLGFWSCLCHFPCKCHVSCL*IDPEDL
Trigger: AAGGTCTTCCGGGTCGATGCAGAGACAGGAGACGTG...GCACTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAATCTCATACCTGGCCTaGTTCTCTCGGTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEISYLA*FSRSKL
Trigger: AAGCTTGGACCGAGAGAAGCAGGCCAGGTATGAGAT...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGTATGTCCTTGTCTATTaGGGAGATCTGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQYVLVY*GDLQDQ
Trigger: CTGGTCCTGCAGATCTCCGCAATAGACAAGGACATA...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCAGTTCTGCGTGCTGGTGCCCGTaGGACTTGGCATCCCATTGT +
Preference number: 4 (lower is better)
Translates to: WTCTMDSFPVGVPVESSSACWCP*DLASHC
Trigger: ACAATGGGATGCCAAGTCGCACGGGCACCAGCACGC...AGAACTGGATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTTTTGGAGGCTGTGGTaGCTGGCGTCTGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTFWRLW*LASDWP
Trigger: AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AGGACCAGGTTAGGCCACGAACATGAGTTATCTGAGAGTGGGGGTTATCAGTGTTACATGACAGAGGCGTaGTCTCCCACAGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RTRLGHEHELSESGGYQCYMTEA*SPTVGS
Trigger: CGACCCCACTGTGGGAGACCACGCCTCTGTCATGTA...ACACTGATAACCCCCACTCTCAGATAACTCATGTTCGTGGCCTAACCTGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GAGAATAAGCCTTCAAGGCCGGACAGAGGACAAGTAGCTCTGGATGCCCAGGACTTCCCCTTCAGGATTTaGTACATGACAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ENKPSRPDRGQVALDAQDFPFRI*YMTEAW
Trigger: CCACGCCTCTGTCATGTACCAAATCCTGAAGGGGAA...GTCCTGGGCATCCAGAGCTACTTGTCCTCTGTCCGGCCTTGAAGGCTTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CTCAGACCAGCAGGCATAGGAACATCCAGGCCGGATTGTCCTTATCATTCTCATTGTATCGGAGGTCGATaGTGGGGTCTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LRPAGIGTSRPDCPYHSHCIGGR*WGLWPR
Trigger: TCGAGGCCACAGACCCCACCATCGACCTCCGATACA...ATGAGAATGATAAGGACAATCCGGCCTGGATGTTCCTATGCCTGCTGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCATGGAATCCAGTTCTTTaGCCTCCACAGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPWNPVL*PPQSGY
Trigger: ATAACCTGACTGTGGAGGCCAAAGAACTGGATTCCA...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: AGLGSHCHFWRLWCLASDELHVS*CYVLVY
Trigger: ATAGACAAGGACATAACACCACGAAACGTGAAGTTC...GTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGGTAGGAAGTGGACCTTaGTATGCTCCCGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQVGSGP*YAPGQT
Trigger: AGTTTGACCGGGAGCATACCAAGGTCCACTTCCTAC...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCATTTTTGGAGGCTGTaGTGCCTGGCGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWHFWRL*CLASDW
Trigger: CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCACGAGGAAGGGGTGCTaGGCTGGGGAGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVTRKGC*AGESLP
Trigger: TGGCAGTGACTCCCCAGCCCAGCACCCCTTCCTCGT...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTACTTGGAGTGGAGTATaGAGTTGGAGCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFATWSGV*SWSRAR
Trigger: CCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGT...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGTACAGCACAGTTACTaGCATGGCAGGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWVQHSY*HGRPVR
Trigger: CCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTAC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCAGGTGTAAAGACACATaGCTCGGCTCCGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSRCKDT*LGSVMQ
Trigger: CTGCATGACGGAGCCGAGCCATGTGTCTTTACACCT...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 72 bp CCATTGTCTGAGATGACCACGGGTAGGAAGTGGACCTaGGTATGCTCCCGGTCAAACTGCCCATACTTGACT +
Preference number: 4 (lower is better)
Translates to: PLSEMTTGRKWT*VCSRSNCPYLT
Trigger: AGTCAAGTATGGGCAGTTTGACCGGGAGCATACCAAGGTCCACTTCCTACCCGTGGTCATCTCAGACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACACTTGCGACTCACGCTTaGCTTGATCTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTLATHA*LDLAYM
Trigger: CATGTAGGCAAGATCAAGTCAAGCGTGAGTCGCAAG...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGTGTACTTGGTCTGGGTaGAGAAGGGGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQCTWSG*RRGSCH
Trigger: ATGACAACTTCCCCTTCTTCACCCAGACCAAGTACA...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCAAAAGAAAAGTTTCCTaGTCTGAAGAAAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGKRKVS*SEERLE
Trigger: CTCAAGCCTTTCTTCAGATCAGGAAACTTTTCTTTT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539168.1
CDS-3UTR GCA 90 bp GGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGTTCTCTTCATCAATGTaGATCTGGTTCCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: GLGSHCHFWRLWCLASDWFSSSM*IWFQIQ
Trigger: TTGGATTTGGAACCAGATGCACATTGATGAAGAGAA...CCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGCATTGAACAACCGATaGGTGAACACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGALNNR*VNTGQL
Trigger: CAACTGGCCTGTGTTCACGCATCGGTTGTTCAATGC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAGAGAGCCCACAGAGGTaGCCACACGGGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAESPQR*PHGCLQ
Trigger: CTGAAGACACCCGTGTGGGCACCTCTGTGGGCTCTC...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTCTATTGCGGAGATCTaGAGGACCAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTSIAEI*RTSWPW
Trigger: CCATGGCCAGCTGGTCCTGCAGATCTCCGCAATAGA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR GCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTKVNSP*SLHLHT
Trigger: CGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGGCACGCTCTTGCCGTaGGCGCGGGCCTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPGTLLP*ARACFR
Trigger: CCGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAAGGGGAGACGTCTTCTaGTCCGGGAACATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLARGDVF*SGNICP
Trigger: GGGGCAGATGTTCCCGGAGCAGAAGACGTCTCCCCT...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCATACAGTACTTGTCATaGACCAGTTTGGCCAATATA +
Preference number: 4 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGIQYLS*TSLANI
Trigger: TATATTGGCCAAACTGGTGCATGACAAGTACTGTAT...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACATTGGGCTTCTGGTCTTaGCTCTGTCACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTLGFWS*LCHFPC
Trigger: ACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAA...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp TGGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTAGGCCACGAACATGAGTTACTGTGGGTGTCCCGTTaGGCAGGGTTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: WSRKERSNRTRLGHEHELLWVSR*AGLAPA
Trigger: AGCAGGTGCTAACCCTGCCCAACGGGACACCCACAG...TAACTCATGTTCGTGGCCTAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GTCAAGATGCCAGGCTGCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGATGACAGCAGTGAGGTaGTACTCTGAGATATTCTCC +
Preference number: 4 (lower is better)
Translates to: VKMPGCQVQELGLLVLPLMTAVR*YSEIFS
Trigger: GGAGAATATCTCAGAGTACCACCTCACTGCTGTCAT...CAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGCAGCCTGGCATCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CTCGGAAGAACTGGCCCTTGTCACTGGTCCTGCGGATGGAGTATCCAATGCTATATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: LGRTGPCHWSCGWSIQCYMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...ATAGCATTGGATACTCCATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGTGACTCGGAAGAACTaGCCCTTGTCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTVTRKN*PLSLVL
Trigger: CAGGACCAGTGACAAGGGCCAGTTCTTCCGAGTCAC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp CGCATCAGGGTCCATGGCCAGCACTGTGCCAATCAGAGGCTTCTTCTGGTTTTCTGTGGACTTGCACAATaGATTCTTTTCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RIRVHGQHCANQRLLLVFCGLAQ*ILFLWG
Trigger: CCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACA...GAAAACCAGAAGAAGCCTCTGATTGGCACAGTGCTGGCCATGGACCCTGATGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAATGTGGACTTGCACAATaGATTCTTTTCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEECGLAQ*ILFLWG
Trigger: CCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACA...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGTCCAAAACTTCAATGTaGACTTGCACAATGGATTCT +
Preference number: 4 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGSKTSM*TCTMDS
Trigger: AGAATCCATTGTGCAAGTCCACATTGAAGTTTTGGA...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCAGGACCAGCTGGCCATaGACAGCGTTCTCACACACT +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTRTSWP*TAFSHT
Trigger: AGTGTGTGAGAACGCTGTCCATGGCCAGCTGGTCCT...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGGTAGGAAGTGGACCTTaGTATGCTCCCGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGVGSGP*YAPGQT
Trigger: AGTTTGACCGGGAGCATACCAAGGTCCACTTCCTAC...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAATGGCTACCACTGCCTaGATGCTCACGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAMATTA*MLTPTW
Trigger: CCAGGTGGGCGTGAGCATCCAGGCAGTGGTAGCCAT...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAGTGACCAGCTGCTCGTaGATCTCCGGCACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAVTSCS*ISGTLL
Trigger: CAAGAGCGTGCCGGAGATCCACGAGCAGCTGGTCAC...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTTCACCTCGATCATaGCTGCCATCTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVSSPRS*LPSPRA
Trigger: GGCCCGGGGAGATGGCAGCCATGATCGAGGTGAAGA...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGGGTGACAGGGTTATGTaGATGTCTGAGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWGDRVM*MSEPRQ
Trigger: CTGTCTGGGCTCAGACATCCACATAACCCTGTCACC...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCTTTGCTTTGCAGCCTTaGGGAGCCAGAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSFALQP*GARGSL
Trigger: AAGACTTCCTCTGGCTCCCCAAGGCTGCAAAGCAAA...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCTTCTCAGGCAAAACTaGAGGGGTGCTGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWLLRQN*RGAEES
Trigger: AGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCGGGCTTTGCCCAGAGTaGGAACCTCGGTCCATGACG +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVGLCPE*EPRSMT
Trigger: CGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCC...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGCTTGCGACTCACGCTTaGCTTGATCTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWLATHA*LDLAYM
Trigger: CATGTAGGCAAGATCAAGTCAAGCGTGAGTCGCAAG...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTAGGCCACGAACATGAGTTATGTCACAGAGATGACTaGGGTCCCCACAGCCGACGA +
Preference number: 4 (lower is better)
Translates to: WSRKERSNRTRLGHEHELCHRDD*GPHSRR
Trigger: TCGTCGGCTGTGGGGACCTCAGTCATCTCTGTGACA...TAACTCATGTTCGTGGCCTAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp GGTCTTGCCTCTGTCACTTTCCCTGTAAGTGCTAGGAGAAGCCAGTTCCCCTCTTGTACTTGGTCTGGGTaGAGAAGGGGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GLASVTFPVSARRSQFPSCTWSG*RRGSCH
Trigger: ATGACAACTTCCCCTTCTTCACCCAGACCAAGTACA...AGAGGGGAACTGGCTTCTCCTAGCACTTACAGGGAAAGTGACAGAGGCAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGTGGCCCTCACCCTGTaGTCTGTCACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRVALTL*SVTPDL
Trigger: GAGATCAGGAGTGACAGATCACAGGGTGAGGGCCAC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCGGGAACCTCGGTCCATaGCGAAGGGTGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAGNLGP*RRVSLV
Trigger: CACCAAGCTCACCCTTCGTCATGGACCGAGGTTCCC...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACAGAGGACAAGTAGCTCTCTGGTGTGTCGTCTaGTTGGTTGCTTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: ESCGAENKPSRPDRGQVALWCVV*LVAFLT
Trigger: AGTCAAGAAAGCAACCAATCAGACGACACACCAGAG...AGCTACTTGTCCTCTGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp CTGGGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTTTCTCTTCATCAATGTaGATCTGGTTCCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: LGWGVTAIFGGCGAWRLTFSSSM*IWFQIQ
Trigger: TTGGATTTGGAACCAGATGCACATTGATGAAGAGAA...AGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGTTGTCATTGATGTCTTaGAGAGTGACCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGLSLMS*RVTSTV
Trigger: CACCGTGCTGGTCACTCTGCAAGACATCAATGACAA...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGGGCTGGGGAGTCACTaGCATTTTTGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRGLGSH*HFWRLW
Trigger: CCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCCC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTCTGAATGTGGTTCAGTaGTCAGTACAGCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVLNVVQ*SVQHSY
Trigger: GTAACTGTGCTGTACTGAGCACTGAACCACATTCAG...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAACTGAATGTGGTTCAGTaGTCAGTACAGCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEELNVVQ*SVQHSY
Trigger: GTAACTGTGCTGTACTGAGCACTGAACCACATTCAG...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTACTCCTGATCTCCACTaGCCCTCCAGAATGAATTCA +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFATPDLH*PSRMNS
Trigger: TGAATTCATTCTGGAGGGGCAGTGGAGATCAGGAGT...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAGGCTCGGCTCCGTCATaGAGTCATGAGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAGSAPS*SHEWVW
Trigger: CCAAACCCACTCATGACTGCATGACGGAGCCGAGCC...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAACTCTTTTGGCGCCGGTaGGTGGGCAGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKELFWRR*VGSRLW
Trigger: CCACAGCCTGCTGCCCACCCACCGGCGCCAAAAGAG...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CAGCGAGGTGTAAAGACACATGGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTATGACAGCAGTGAGGTaGTACTCTGAGATATTCTCC +
Preference number: 4 (lower is better)
Translates to: QRGVKTHGSAPSCSHEWVMTAVR*YSEIFS
Trigger: GGAGAATATCTCAGAGTACCACCTCACTGCTGTCAT...AACCCACTCATGACTGCATGACGGAGCCGAGCCATGTGTCTTTACACCTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGTGCATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: KCKSLGFWSCLCHFPCKCMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...GCACTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCGCATCAGGGTCCATaGCCAGCACTGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNPHQGP*PALCQS
Trigger: TGATTGGCACAGTGCTGGCCATGGACCCTGATGCGG...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp TCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTCCAAAACTTCAATGTaGACTTGCACAATGGATTCT +
Preference number: 4 (lower is better)
Translates to: SSCPGLCLQADRHQDLTSSKTSM*TCTMDS
Trigger: AGAATCCATTGTGCAAGTCCACATTGAAGTTTTGGA...GCTGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GGGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGATGAAGCTGTCCAAAACTTCAATGTaGACTTGCACAATGGATTCT +
Preference number: 4 (lower is better)
Translates to: GLMYRRSMVGSVASTMKLSKTSM*TCTMDS
Trigger: AGAATCCATTGTGCAAGTCCACATTGAAGTTTTGGA...CAGCTTCATCGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCTGTCATGCACCAGTTTaGCCAATATATAGACATTAT +
Preference number: 4 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCCHAPV*PIYRHY
Trigger: ATAATGTCTATATATTGGCCAAACTGGTGCATGACA...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCTGTCATGCACCAGTTTaGCCAATATATAGACATTAT +
Preference number: 4 (lower is better)
Translates to: GWGVTAIFGGCGAWRLTGCHAPV*PIYRHY
Trigger: ATAATGTCTATATATTGGCCAAACTGGTGCATGACA...GCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACAAAGAGCTTGGGCTTCTaGTCTTGCCTCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTKSLGF*SCLCHF
Trigger: AAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTT...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp AGGACCAGGTTAGGCCACGAACATGAGTTATCTGAGAGTGGGGGTTATCAGTGTCCAAGTGCAAGAGCTTaGGCTTCTGGTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTRLGHEHELSESGGYQCPSARA*ASGLAS
Trigger: AGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGG...ACACTGATAACCCCCACTCTCAGATAACTCATGTTCGTGGCCTAACCTGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563425.2
3UTR CAA 72 bp TCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATaGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SAPSCSHEWVWT*SSFAKGHILGS
Trigger: GGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 72 bp GATGGTGGGGTCTGTGGCCTCGACGATGAAGCTGTATaGCTGGATGTATTCATAATCCAGAGGCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: DGGVCGLDDEAV*LDVFIIQRLHG
Trigger: CCCATGAAGCCTCTGGATTATGAATACATCCAGCAATACAGCTTCATCGTCGAGGCCACAGACCCCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTTTGATCTTGCCTACATaGTGGGGAAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFALILPT*WGSEVF
Trigger: AAACACCTCACTTCCCCATCATGTAGGCAAGATCAA...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGCCACATATTCTCCTTTaGGCAGGTACTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKPHILL*AGTWHS
Trigger: AGAATGCCAAGTACCTGCTCAAAGGAGAATATGTGG...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGTTGTCGTTCACGTCATaGACTTTGATGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGLSFTS*TLMVKL
Trigger: CAGCTTCACCATCAAAGTTCATGACGTGAACGACAA...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAATCCCTTGCAGTGTaGGGGGCTTTGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAQSLAV*GALPRV
Trigger: CACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTG...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGTTGTCATTGATGTCTTaGAGAGTGACCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWLSLMS*RVTSTV
Trigger: CACCGTGCTGGTCACTCTGCAAGACATCAATGACAA...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTCGGCCACGGTCAGCGTaGTGGTGCCCGTGCGACTTG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPRPRSA*WCPCDL
Trigger: CAAGTCGCACGGGCACCAGCACGCTGACCGTGGCCG...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GACAGAGAAAAGAAAGAGAGCATGGATTGGCGACCAGGTGAGGCAGAGAAGGGGACACCAGCCTGGATTTaGCAGCATTTGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: DREKKESMDWRPGEAEKGTPAWI*QHLRIV
Trigger: GACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGT...CCCCTTCTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTTCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTCGGAAGAACTGGCCCTTGTCACTGGTCCTGCGGATGGAGTATCCAATGCTATACACCAGCCTGGATTTaGCAGCATTTGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LGRTGPCHWSCGWSIQCYTPAWI*QHLRIV
Trigger: GACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGT...ATAGCATTGGATACTCCATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGTCTCCAAGGTGTGTTTaGAGTGAAACGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWSPRCV*SETFQW
Trigger: CCACTGGAACGTTTCACTGCAAACACACCTTGGAGA...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCAGTTCTATGTTTCTGTTCCGTTaGACTGCCTGTCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WTCTMDSFPVGVPVESSSMFLFR*TACPSR
Trigger: CCTGGACGGACAGGCAGTCCAACGGAACAGAAACAT...AGAACTGGATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGTCATCAATGTGCATCTaGTTCCAAATCCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQSSMCI*FQIQSL
Trigger: GAGAGATTGGATTTGGAACCAGATGCACATTGATGA...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCAAGGCTGCTGGAAAATaGGGGGCTCGTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVKAAGK*GARPHL
Trigger: CAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTT...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGTGTGGACTTGCACAATaGATTCTTTTCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWCGLAQ*ILFLWG
Trigger: CCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACA...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCTGGGCTGGTAGGGCTTaGCAAACTCCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAWAGRA*QTPGHC
Trigger: ACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCA...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GTGAAACGTTCCAGTGGAAGATGCATGGGTGACCACAGAGGTTGGGCAGGGCAGGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: VKRSSGRCMGDHRGWAGQELHVS*CYVLVY
Trigger: ATAGACAAGGACATAACACCACGAAACGTGAAGTTC...CTGCCCTGCCCAACCTCTGTGGTCACCCATGCATCTTCCACTGGAACGTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCGAAGGGGTGCTGGGCTaGGGAGTCACTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVEGVLG*GVTAIF
Trigger: AAAAATGGCAGTGACTCCCCAGCCCAGCACCCCTTC...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTGATATTTCAGGAACCTaGAGTTTGCTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFADISGT*SLLSQG
Trigger: GCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATC...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCGCACAGTTACTGGCATaGCAGGCCAGTGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVAQLLA*QASEVT
Trigger: AGTGACCTCACTGGCCTGCCATGCCAGTAACTGTGC...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTTACATGATGGGGAAGTaGGGTGTTTTTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFAYMMGK*GVFLFI
Trigger: GATGAAGAGAAAAACACCTCACTTCCCCATCATGTA...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCTACATGATGGGGAAGTaGGGTGTTTTTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSYMMGK*GVFLFI
Trigger: GATGAAGAGAAAAACACCTCACTTCCCCATCATGTA...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCATCAGGATTTGGTACATaGCAGAGGCGTGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLASGFGT*QRRGLP
Trigger: TGGGAGACCACGCCTCTGTCATGTACCAAATCCTGA...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGTCAGGATTTGGTACATaGCAGAGGCGTGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRSGFGT*QRRGLP
Trigger: TGGGAGACCACGCCTCTGTCATGTACCAAATCCTGA...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCTGTGGCCTCGACGATaGAGCTGTATTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNLWPRR*SCIAGC
Trigger: ACATCCAGCAATACAGCTTCATCGTCGAGGCCACAG...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR TCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGTCCGTCATGCAGTCATaGGTGGGTTTGGACATTGTC +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMSVMQS*VGLDIV
Trigger: GACAATGTCCAAACCCACTCATGACTGCATGACGGA...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGGTTAGCACCTGCTaGTGCCACTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKERVSTC*CHCCHC
Trigger: GCAGTGGCAGCAGTGGCAGCAGCAGGTGCTAACCCT...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp TGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCAGTTCTTGCTCCCGGTCAAACTaGCCATACTTGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: WTCTMDSFPVGVPVESSSCSRSN*PYLTVM
Trigger: CATCACAGTCAAGTATGGGCAGTTTGACCGGGAGCA...AGAACTGGATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCAGAGTGGACACCAGCCTGGATTTaGCAGCATTTGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: QVSVIYNPLQCEGLCPEWTPAWI*QHLRIV
Trigger: GACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGT...CCACTCTGGGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGGGAATTCTCATAGTTaGTTCAGTGTGACGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTGNSHS*FSVTCL
Trigger: CAGGCACGTCACACTGAAGCAACTATGAGAATTCCC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649567.1
CDS-3UTR CCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAACGTGGTCTCCCACAGTaGGGTCGTCTGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKERGLPQ*GRLHPL
Trigger: CAGTGGATGCAGACGACCCCACTGTGGGAGACCACG...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRMMPSL*AGFVSM
Trigger: CATTGAGACAAACCCCGCCCACAACGAGGGCATCAT...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCAAGGCTGCTGGAAAATaGGGGGCTCGTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAKAAGK*GARPHL
Trigger: CAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCATCTGCAGGACCAGCTaGCCATGGACAGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAICRTS*PWTAFS
Trigger: TGAGAACGCTGTCCATGGCCAGCTGGTCCTGCAGAT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTCCACGGTCAGCGTGCTaGTGCCCGTGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIPRSAC*CPCDLA
Trigger: TGCCAAGTCGCACGGGCACCAGCACGCTGACCGTGG...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTTAGACGGCGGTCTGTaGGTGACAGGGTTATGTGGA +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVLDGGL*VTGLCG
Trigger: TCCACATAACCCTGTCACCCACAGACCGCCGTCTAA...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCAGTCTCCCTTGGGAATaGGCTGCAGAGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFASLPWE*AAENPA
Trigger: GGCAGGATTCTCTGCAGCCCATTCCCAAGGGAGACT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGATGGTCAGTCTCCCTTaGGAATGGGCTGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMMVSLP*EWAAEN
Trigger: ATTCTCTGCAGCCCATTCCCAAGGGAGACTGACCAT...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGGCCTGGAGAGGGGTTaGGGAGTGGTGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPGLERG*GVVGHL
Trigger: CAAGTGCCCCACCACTCCCCAACCCCTCTCCAGGCC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCAAAGAGAGCATGGATTaGCGACCAGGTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVKESMD*RPGEAE
Trigger: CTCTGCCTCACCTGGTCGCCAATCCATGCTCTCTTT...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAACCCCTCTCTGAGTCCTaGCCTCAGACCAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKEPLSES*PQTSRH
Trigger: ATGCCTGCTGGTCTGAGGCCAGGACTCAGAGAGGGG...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp GTGAAGGGGCCTCTGGTGTGTCGTCTGATTGGTTGCTTTCTTGACTGTCAGATCTACATGATGGGGAAGTaGGGTGTTTTTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VKGPLVCRLIGCFLDCQIYMMGK*GVFLFI
Trigger: GATGAAGAGAAAAACACCTCACTTCCCCATCATGTA...GATCTGACAGTCAAGAAAGCAACCAATCAGACGACACACCAGAGGCCCCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp AGGACCAGGTTAGGCCACGAACATGAGTTATCTGAGAGTGGGGGTTATCAGTGTTTGATCTTGCCTACATaGTGGGGAAGTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RTRLGHEHELSESGGYQCLILPT*WGSEVF
Trigger: AAACACCTCACTTCCCCATCATGTAGGCAAGATCAA...ACACTGATAACCCCCACTCTCAGATAACTCATGTTCGTGGCCTAACCTGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCGGTTATGTGGATGTCTaGGCCCAGACAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAGYVDV*AQTEHQ
Trigger: CTGGTGTTCTGTCTGGGCTCAGACATCCACATAACC...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGGATTGGCGACCAGGTaGGGCAGAGAAGGGGAGACG +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIGLATR*GREGET
Trigger: CGTCTCCCCTTCTCTGCCTCACCTGGTCGCCAATCC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TGGTCACGAAAAGAAAGGAGCAATAGGACCAGGTTAGGCCACGAACATGAGTTAAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: WSRKERSNRTRLGHEHELSIMSL*IFPGGT
Trigger: TGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCT...TAACTCATGTTCGTGGCCTAACCTGGTCCTATTGCTCCTTTCTTTTCGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAATTCTCTTCATCAATGTaGATCTGGTTCCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: EPGVCYPKADEVSGTHEEFSSSM*IWFQIQ
Trigger: TTGGATTTGGAACCAGATGCACATTGATGAAGAGAA...TTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CCCTTCTCAGGCAAAACTGGAGGGGTGCTGAGGAGTCTCAAAGCAAGGTCTCAGTTCTCTTCATCAATGTaGATCTGGTTCCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: PFSGKTGGVLRSLKARSQFSSSM*IWFQIQ
Trigger: TTGGATTTGGAACCAGATGCACATTGATGAAGAGAA...CTGAGACCTTGCTTTGAGACTCCTCAGCACCCCTCCAGTTTTGCCTGAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCATCTCATACCTGGCCTaGTTCTCTCGGTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVISYLA*FSRSKL
Trigger: AAGCTTGGACCGAGAGAAGCAGGCCAGGTATGAGAT...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp CTTCAATGTGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LQCGLAQWILFLWGFQWNQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...ATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCACATTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR GCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCACAGGAACCTGGAGTTTaGTATCCCAAGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAQEPGV*YPKADE
Trigger: CTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTG...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCGTTCCAGTGGAAGATaGATGGGTGACCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFARSSGR*MGDHRG
Trigger: ACCTCTGTGGTCACCCATGCATCTTCCACTGGAACG...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGTCTCCAAGGTGTGTTTaGAGTGAAACGTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMSPRCV*SETFQW
Trigger: CCACTGGAACGTTTCACTGCAAACACACCTTGGAGA...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GCCAAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGTCATCAATGTGCATCTaGTTCCAAATCCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: AKCKSLGFWSCLCHFPCKSSMCI*FQIQSL
Trigger: GAGAGATTGGATTTGGAACCAGATGCACATTGATGA...CTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCATGACAGCAGTGAGGTaGTACTCTGAGATATTCTCC +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTMTAVR*YSEIFS
Trigger: GGAGAATATCTCAGAGTACCACCTCACTGCTGTCAT...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACAGAGGACAAGTAGCTGTCCAGAATTATCGATaGCAAAATACTCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ESCGAENKPSRPDRGQVAVQNYR*QNTLSP
Trigger: AGGGGAAAGAGTATTTTGCCATCGATAATTCTGGAC...AGCTACTTGTCCTCTGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp CTCAGACCAGCAGGCATAGGAACATCCAGGCCGGATTGTCCTTATCATTCTCATAATGTGTACTTGGTCTaGGTGAAGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRPAGIGTSRPDCPYHSHNVYLV*VKKGKL
Trigger: CAACTTCCCCTTCTTCACCCAGACCAAGTACACATT...ATGAGAATGATAAGGACAATCCGGCCTGGATGTTCCTATGCCTGCTGGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGTTCTGGGGCTCATCTaGGTCCTCAACAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRVLGLI*VLNKQR
Trigger: TCTCTGTTTGTTGAGGACCCAGATGAGCCCCAGAAC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AACAGACAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAGGCTGCTGGAAAATaGGGGGCTCGTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: NRQQQTHHKCIHMFVWSRKAAGK*GARPHL
Trigger: CAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTT...TCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTGTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCATCAGAGGCTTCTTCTaGTTTTCCTTCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTIRGFF*FSFSWK
Trigger: CTTCCAGCTGAAGGAAAACCAGAAGAAGCCTCTGAT...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CCA 90 bp GTCTTTGAGTTAGACGGCGGTCTGTGGGTGACAGGGTTATGTGGATGTCTGAGCGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: VFELDGGLWVTGLCGCLSELHVS*CYVLVY
Trigger: ATAGACAAGGACATAACACCACGAAACGTGAAGTTC...GCTCAGACATCCACATAACCCTGTCACCCACAGACCGCCGTCTAACTCAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTATGCTCACGCCCACCTaGGCGGCCATATCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPMLTPT*AAISSQ
Trigger: CTGCGAGGATATGGCCGCCCAGGTGGGCGTGAGCAT...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCACTTGGAGTGGAGTATaGAGTTGGAGCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFATWSGV*SWSRAR
Trigger: CCTAGCCCTGCTCCAACTCCATACTCCACTCCAAGT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGGGTGGGTGTGGAGGTaGCCCTCACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPGWVWR*PSPCDL
Trigger: CAGATCACAGGGTGAGGGCCACCTCCACACCCACCC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGAAAAGAAAGAGAGCATaGATTGGCGACCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMKRKRA*IGDQVR
Trigger: CCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTT...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAGTGCAAGAGCTTGGGCTTCTGGTCTTGCCTCTGTCACTTTCCCTGTAAGTGCATCCACATGTTTGTGTaGTCACGAAAAGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCKSLGFWSCLCHFPCKCIHMFV*SRKERS
Trigger: GCTCCTTTCTTTTCGTGACCACACAAACATGTGGAT...GCACTTACAGGGAAAGTGACAGAGGCAAGACCAGAAGCCCAAGCTCTTGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTACATGATGGGGAAGTaGGGTGTTTTTCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTYMMGK*GVFLFI
Trigger: GATGAAGAGAAAAACACCTCACTTCCCCATCATGTA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCCTTGCGACTCACGCTTaGCTTGATCTTGCCTACATG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFALATHA*LDLAYM
Trigger: CATGTAGGCAAGATCAAGTCAAGCGTGAGTCGCAAG...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AACAGACAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGATCAGGATTTGGTACATaGCAGAGGCGTGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRQQQTHHKCIHMFVWSRSGFGT*QRRGLP
Trigger: TGGGAGACCACGCCTCTGTCATGTACCAAATCCTGA...TCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTGTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp CACATAGGACTGGTGAGAGCTGTGGTGCAGAGAATAAGCCTTCAAGGCCGGACATTCTCTTCATCAATGTaGATCTGGTTCCAAATCCAA +
Preference number: 4 (lower is better)
Translates to: HIGLVRAVVQRISLQGRTFSSSM*IWFQIQ
Trigger: TTGGATTTGGAACCAGATGCACATTGATGAAGAGAA...TGTCCGGCCTTGAAGGCTTATTCTCTGCACCACAGCTCTCACCAGTCCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGACACCAGCCTGGATTTaGCAGCATTTGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMTPAWI*QHLRIV
Trigger: GACTATTCTCAAATGCTGGCAAATCCAGGCTGGTGT...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GGCTCGGCTCCGTCATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTTGCTATACAGTACTTGTCATaGACCAGTTTGGCCAATATA +
Preference number: 4 (lower is better)
Translates to: GSAPSCSHEWVWTLSSFAIQYLS*TSLANI
Trigger: TATATTGGCCAAACTGGTGCATGACAAGTACTGTAT...AGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATGACGGAGCCGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAGGTCCAGCCTCTCAATaGCGAACACGTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKEGPASQ*RTRLLS
Trigger: AGACAGGAGACGTGTTCGCCATTGAGAGGCTGGACC...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp AAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGAGCAATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: KPTINASTCLCGHEKKGAMMPSL*AGFVSM
Trigger: CATTGAGACAAACCCCGCCCACAACGAGGGCATCAT...TGCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCATGTTGATAATGACCTaGGCTCTGTTTCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAMLIMT*ALFPAG
Trigger: TCCCGCGGGAAACAGAGCCCAGGTCATTATCAACAT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCTGTACTTGGTCTGGGTaGAGAAGGGGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFACTWSG*RRGSCH
Trigger: ATGACAACTTCCCCTTCTTCACCCAGACCAAGTACA...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGACTGCCCCTCCAGAATaGATTCACAGTTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRTAPPE*IHSCFK
Trigger: TTTGAAGCAACTGTGAATTCATTCTGGAGGGGCAGT...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGAAGGTGTGTTTGCAGTaGAACGTTCCAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRKVCLQ*NVPVED
Trigger: ATCTTCCACTGGAACGTTTCACTGCAAACACACCTT...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp AAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGAGCAATCTCATACCTGGCCTaGTTCTCTCGGTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KPTINASTCLCGHEKKGAISYLA*FSRSKL
Trigger: AAGCTTGGACCGAGAGAAGCAGGCCAGGTATGAGAT...TGCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR GCA 90 bp GAAGATAGATTCAAGAATACAGTTTTAGTGAAGGGGCCTCTGGTGTGTCGTCTGTTGTCATTGATGTCTTaGAGAGTGACCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: EDRFKNTVLVKGPLVCRLLSLMS*RVTSTV
Trigger: CACCGTGCTGGTCACTCTGCAAGACATCAATGACAA...CAGACGACACACCAGAGGCCCCTTCACTAAAACTGTATTCTTGAATCTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCTCATCAATGTGCATCTaGTTCCAAATCCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTSSMCI*FQIQSL
Trigger: GAGAGATTGGATTTGGAACCAGATGCACATTGATGA...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCGTCCAGAATTATCGATaGCAAAATACTCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: IFQEPGVCYPKADEVSGTVQNYR*QNTLSP
Trigger: AGGGGAAAGAGTATTTTGCCATCGATAATTCTGGAC...GGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGATATTTCAGGAACCTaGAGTTTGCTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRDISGT*SLLSQG
Trigger: GCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTAGTGGAGTATGGAGTTaGAGCAGGGCTAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISGVWS*SRARAP
Trigger: GGGAGCCCTAGCCCTGCTCCAACTCCATACTCCACT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCAAAAGAAAGAGAGCATaGATTGGCGACCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAKRKRA*IGDQVR
Trigger: CCTCACCTGGTCGCCAATCCATGCTCTCTTTCTTTT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCATCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLASCSHE*VWTLSS
Trigger: ACTGGACAATGTCCAAACCCACTCATGACTGCATGA...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 72 bp CATGCAGTCATGAGTGGGTTTGGACATTGTCCAGTTTaGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAA +
Preference number: 4 (lower is better)
Translates to: HAVMSGFGHCPV*LKATSWVPLNQ
Trigger: TTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACAATGTCCAAACCCACTCATGACTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR GCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTAGTCGCCCCGCAAGATaGTGTACTTGGTCATCCGGT +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAISRPAR*CTWSSG
Trigger: ACCGGATGACCAAGTACAGCATCTTGCGGGGCGACT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ACTGATGCCACTTCTCCAAGGTGTGTTTGCAGTGAAACGTTCCAGTGGAAGATGGTCCAGAATTATCGATaGCAAAATACTCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TDATSPRCVCSETFQWKMVQNYR*QNTLSP
Trigger: AGGGGAAAGAGTATTTTGCCATCGATAATTCTGGAC...CATCTTCCACTGGAACGTTTCACTGCAAACACACCTTGGAGAAGTGGCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCAATGTGTACTTGGTCTaGGTGAAGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFANVYLV*VKKGKL
Trigger: CAACTTCCCCTTCTTCACCCAGACCAAGTACACATT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCATCAGAGGCTTCTTCTaGTTTTCCTTCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFAIRGFF*FSFSWK
Trigger: CTTCCAGCTGAAGGAAAACCAGAAGAAGCCTCTGAT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341529.8
ENST00000649567.1
CDS-3UTR CCA 90 bp CAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAAGGAGCATCAGAGGCTTCTTCTaGTTTTCCTTCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QTHHKCIHMFVWSRKERSIRGFF*FSFSWK
Trigger: CTTCCAGCTGAAGGAAAACCAGAAGAAGCCTCTGAT...GCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp TGGACTTGCACAATGGATTCTTTTCCTGTGGGGGTTCCAGTGGAATCCAGTTCTGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: WTCTMDSFPVGVPVESSSELHVS*CYVLVY
Trigger: ATAGACAAGGACATAACACCACGAAACGTGAAGTTC...AGAACTGGATTCCACTGGAACCCCCACAGGAAAAGAATCCATTGTGCAAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTGTGGGGCACTTGGAGTaGAGTATGGAGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPVGHLE*SMELEQ
Trigger: CTGCTCCAACTCCATACTCCACTCCAAGTGCCCCAC...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGTACAGCACAGTTACTaGCATGGCAGGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIVQHSY*HGRPVR
Trigger: CCTCACTGGCCTGCCATGCCAGTAACTGTGCTGTAC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGGTTTGTCTCAATGGTaGAAGCGTCCTGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIGLSQW*KRPGSR
Trigger: GCGACTACCAGGACGCTTTCACCATTGAGACAAACC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCATCAATGTGCATCTaGTTCCAAATCCAATCTCTC +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVSSMCI*FQIQSL
Trigger: GAGAGATTGGATTTGGAACCAGATGCACATTGATGA...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp ATAAGCCATTTCCCTGAATGTGGTTCAGTGCTCAGTACAGCACAGTTACTGGCAGTCCAGAATTATCGATaGCAAAATACTCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ISHFPECGSVLSTAQLLAVQNYR*QNTLSP
Trigger: AGGGGAAAGAGTATTTTGCCATCGATAATTCTGGAC...TGCCAGTAACTGTGCTGTACTGAGCACTGAACCACATTCAGGGAAATGGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTATGATGCCCTCGTTGTaGGCGGGGTTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPMMPSL*AGFVSM
Trigger: CATTGAGACAAACCCCGCCCACAACGAGGGCATCAT...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp TGTCCAGTTTTGCTAAAGGCCACATCTTGGGTTCCTCTAAACCAAGGGATAAGGGAACTTCACGTTTCGTaGTGTTATGTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: CPVLLKATSWVPLNQGIRELHVS*CYVLVY
Trigger: ATAGACAAGGACATAACACCACGAAACGTGAAGTTC...CCTTATCCCTTGGTTTAGAGGAACCCAAGATGTGGCCTTTAGCAAAACTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGGATGCAGAGTAAGATaGCTACCACTGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIGCRVR*LPLPGC
Trigger: GCATCCAGGCAGTGGTAGCCATCTTACTCTGCATCC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp AAAACAAACAAGTCAGTGTTATCTACAATCCCTTGCAGTGTGAGGGGCTTTGCCAGTCATGAGTGGGTTTaGACATTGTCCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTNKSVLSTIPCSVRGFASHEWV*TLSSFA
Trigger: AGCAAAACTGGACAATGTCCAAACCCACTCATGACT...GGCAAAGCCCCTCACACTGCAAGGGATTGTAGATAACACTGACTTGTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTAGGTGTAAAGACACATaGCTCGGCTCCGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIRCKDT*LGSVMQ
Trigger: CTGCATGACGGAGCCGAGCCATGTGTCTTTACACCT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
3UTR CAA 72 bp GACAACAACAAACCCACCATAAATGCATCCACATGTTaGTGTGGTCACGAAAAGAAAGGAGCAATAGGACCA +
Preference number: 4 (lower is better)
Translates to: DNNKPTINASTC*CGHEKKGAIGP
Trigger: TGGTCCTATTGCTCCTTTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAATTGTCGTTCACGTCATaGACTTTGATGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKELSFTS*TLMVKL
Trigger: CAGCTTCACCATCAAAGTTCATGACGTGAACGACAA...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR CCA 90 bp TATTCCTGGATATTTCAGGAACCTGGAGTTTGCTATCCCAAGGCTGATGAGGTCTCCAAAACTTCAATGTaGACTTGCACAATGGATTCT +
Preference number: 4 (lower is better)
Translates to: YSWIFQEPGVCYPKADEVSKTSM*TCTMDS
Trigger: AGAATCCATTGTGCAAGTCCACATTGAAGTTTTGGA...GACCTCATCAGCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATCCAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000649567.1
CDS-3UTR TCA 90 bp CAACAACAAACCCACCATAAATGCATCCACATGTTTGTGTGGTCACGAAAAGAAGATTGGTTGCTTTCTTaGCTGTCAGATCTTACCACA +
Preference number: 4 (lower is better)
Translates to: QQQTHHKCIHMFVWSRKEDWLLS*LSDLTT
Trigger: TGTGGTAAGATCTGACAGTCAAGAAAGCAACCAATC...TTCTTTTCGTGACCACACAAACATGTGGATGCATTTATGGTGGGTTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS-3UTR TCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTAAGGTGTGTTTGCAGTaGAACGTTCCAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIKVCLQ*NVPVED
Trigger: ATCTTCCACTGGAACGTTTCACTGCAAACACACCTT...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp GTACTTGTCATGCACCAGTTTGGCCAATATATAGACATTATCTGTAGAGCAATTGATATTTCAGGAACCTaGAGTTTGCTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VLVMHQFGQYIDIICRAIDISGT*SLLSQG
Trigger: GCCTTGGGATAGCAAACTCCAGGTTCCTGAAATATC...AATTGCTCTACAGATAATGTCTATATATTGGCCAAACTGGTGCATGACAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CCA 90 bp CAGCATTTGAGAATAGTCATCACTGACATATATTCCTGGATATTTCAGGAACCTTCATGCAGTCATGAGTaGGTTTGGACATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QHLRIVITDIYSWIFQEPSCSHE*VWTLSS
Trigger: ACTGGACAATGTCCAAACCCACTCATGACTGCATGA...AGGTTCCTGAAATATCCAGGAATATATGTCAGTGATGACTATTCTCAAATGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCCCTGCTCGTTGCACTaGCACACGGCCACGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRPCSLH*HTATVS
Trigger: GCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCCGGAAGAACTGGCCCTaGTCACTGGTCCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRRKNWP*SLVLRM
Trigger: CATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCG...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CAA 90 bp GCTAGGGCTCCCGAGAGAGGGCATGATGGTCAGTCTCCCTTGGGAATGGGCTGCATCTCCGGCACGCTCTaGCCGTGCGCGCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARAPERGHDGQSPLGMGCISGTL*PCARAC
Trigger: GCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGAT...GCAGCCCATTCCCAAGGGAGACTGACCATCATGCCCTCTCTCGGGAGCCCTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGATCTCCGGCACGCTCTaGCCGTGCGCGCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGISGTL*PCARAC
Trigger: GCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGAT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS CCA 90 bp GTTGGACTGCCTGTCCGTCCAGGGCTGAGCGTGAGTGGAGCTCTGTaGAGCCTGTCAGCCGACCGTCTTTGGAGGGGAGCCACACCCCGC +
Preference number: 5 (lower is better)
Translates to: VGLPVRPGLSVSGAL*SLSADRLWRGATPR
Trigger: GCGGGGTGTGGCTCCCCTCCAAAGACGGTCGGCTGACAGGCTCCACAGAGCTCCACTCACGCTCAGCCCTGGACGGACAGGCAGTCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR CAA 90 bp CTGGCCTGGGCTGCAGGGGGTTTGGGTCCCCAGGCCCAGAGTGACCTCGGCCGCGATGTTTCTGTTCCGTaGGACTGCCTGTCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: LAWAAGGLGPQAQSDLGRDVSVP*DCLSVQ
Trigger: CTGGACGGACAGGCAGTCCAACGGAACAGAAACATC...GCGGCCGAGGTCACTCTGGGCCTGGGGACCCAAACCCCCTGCAGCCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CAA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGTGGTGCCCGTGCGACTaGGCATCCCATTGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPWCPCD*ASHCLR
Trigger: TCTCAGACAATGGGATGCCAAGTCGCACGGGCACCA...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CAA 90 bp CCCGCGGGAGGGCTCATGTATCGGAGGTCGATGGTGGGGTCTGTGGCCTCGACGAACTCGCCCTGCTCGTaGCACTTGCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: PAGGLMYRRSMVGSVASTNSPCS*HLHTAT
Trigger: CGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTT...CGTCGAGGCCACAGACCCCACCATCGACCTCCGATACATGAGCCCTCCCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CAA 90 bp GCCCTCGTTGTGGGCGGGGTTTGTCTCAATGGTGAAAGCGTCCTGGTAGTCGCCATCTCCGGCACGCTCTaGCCGTGCGCGCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALVVGGVCLNGESVLVVAISGTL*PCARAC
Trigger: GCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGAT...GGCGACTACCAGGACGCTTTCACCATTGAGACAAACCCCGCCCACAACGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS TCA 90 bp CTGCCAGCAGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATaGGCCTCTGCATCTTCCCAGGAGGAACAGATCGTGCCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LPAGPGRRPMWRGAS*ASASSQEEQIVPVG
Trigger: GCCCACAGGCACGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCTGCTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CAA 90 bp GTTTGCTATCCCAAGGCTGATGAGGTCTCTGGGACCCACGAGGAAGGGGTGCTGATCTCCGGCACGCTCTaGCCGTGCGCGCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VCYPKADEVSGTHEEGVLISGTL*PCARAC
Trigger: GCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGAT...CAGCACCCCTTCCTCGTGGGTCCCAGAGACCTCATCAGCCTTGGGATAGCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp GGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCCCCTGCTCGTTGCACTaGCACACGGCCACGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GVTAIFGGCGAWRLTGLGPCSLH*HTATVS
Trigger: GCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGG...GCCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS TCA 90 bp CTGCCAGCAGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATaGGCCTCTGCATCTTCCCAGGAGGAACAGATCTGGGGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LPAGPGRRPMWRGAS*ASASSQEEQIWGKR
Trigger: CCTCTTTCCCCAGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCTGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563425.2
CDS GCA 90 bp AGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACAGATCGTGCCTGTGGGCTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RPRQAPDVARSIMSL*IFPGGTDRACGLRD
Trigger: ATCCCTCAGCCCACAGGCACGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000565334.5
ENST00000614547.4
CDS-3UTR CAA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAACTCGCCCTGCTCGTaGCACTTGCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGNSPCS*HLHTAT
Trigger: CGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTT...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS TCA 90 bp CTGCCAGCAGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATaGGCCTCTGCATCTTCCCAGGAGGAACAGATCTCTCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LPAGPGRRPMWRGAS*ASASSQEEQISLKQ
Trigger: CTGCTTCAGAGAGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCTGCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562048.5
CDS TCA 90 bp CTGCCAGCAGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATaGGCCTCTGCATCTTCCCAGGAGGAACAGATCTCAACATCCGAG +
Preference number: 5 (lower is better)
Translates to: LPAGPGRRPMWRGAS*ASASSQEEQISTSE
Trigger: CTCGGATGTTGAGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCTGCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568155.2
CDS TCA 90 bp CTGCCAGCAGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATaGGCCTCTGCATCTTCCCAGGAGGAACAGATCCTGCTTCTACCT +
Preference number: 5 (lower is better)
Translates to: LPAGPGRRPMWRGAS*ASASSQEEQILLLP
Trigger: AGGTAGAAGCAGGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCTGCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649567.1
CDS GCA 90 bp AGGCCCAGGCAGGCGCCCGATGTGGCGAGGAGCATCATGAGCCTCTaGATCTTCCCAGGAGGAACAGATCTCAACATCCGAGCCCACCTC +
Preference number: 5 (lower is better)
Translates to: RPRQAPDVARSIMSL*IFPGGTDLNIRAHL
Trigger: GAGGTGGGCTCGGATGTTGAGATCTGTTCCTCCTGGGAAGATGCAGAGGCTCATGATGCTCCTCGCCACATCGGGCGCCTGCCTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568155.2
CDS CCA 90 bp TTTCTGTTCCGTTGGACTGCCTGTCCGTCCAGGGCTGAGCGTGAGTaGAGCTCTGTGGAGCCTGTCAGCCGACCGTCTTTGGAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: FLFRWTACPSRAERE*SSVEPVSRPSLEGS
Trigger: GCTCCCCTCCAAAGACGGTCGGCTGACAGGCTCCACAGAGCTCCACTCACGCTCAGCCCTGGACGGACAGGCAGTCCAACGGAACAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614547.4
CDS-3UTR CAA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCAGCTGTGGGTGTCCCGTaGGGCAGGGTTAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPAVGVP*GRVSTC
Trigger: GCAGGTGCTAACCCTGCCCAACGGGACACCCACAGC...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp CAGCTGCTCGTGGATCTCCGGCACGCTCTTGCCGTGCGCGCGGGCCTGCTTCCGCCCACATATTCTCCTTaGAGCAGGTACTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: QLLVDLRHALAVRAGLLPPTYSP*SRYLAF
Trigger: GAATGCCAAGTACCTGCTCAAAGGAGAATATGTGGG...CGGAAGCAGGCCCGCGCGCACGGCAAGAGCGTGCCGGAGATCCACGAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565334.5
CDS-3UTR CAA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGCGGAAGAACTGGCCCTaGTCACTGGTCCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGRKNWP*SLVLRM
Trigger: CATCCGCAGGACCAGTGACAAGGGCCAGTTCTTCCG...CCCAGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000649567.1
CDS-3UTR CAA 90 bp AGTCAAGCTGTCCAGGCCTTTGCCTCCAGGCAGATAGGCACCAGGACCTCACCACCCTGCTCGTTGCACTaGCACACGGCCACGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SQAVQAFASRQIGTRTSPPCSLH*HTATVS
Trigger: GCTGACCGTGGCCGTGTGCAAGTGCAACGAGCAGGG...TGGTGAGGTCCTGGTGCCTATCTGCCTGGAGGCAAAGGCCTGGACAGCTTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341529.8
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp CTGGGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTAACTCGCCCTGCTCGTaGCACTTGCACACGGCCACG +
Preference number: 5 (lower is better)
Translates to: LGSHCHFWRLWCLASDWPNSPCS*HLHTAT
Trigger: CGTGGCCGTGTGCAAGTGCAACGAGCAGGGCGAGTT...AGGCCAGTCAGACGCCAGGCACCACAGCCTCCAAAAATGGCAGTGACTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341529.8
ENST00000539168.1
ENST00000565334.5
ENST00000614547.4
ENST00000649567.1
CDS-3UTR CAA 90 bp GGGAGTCACTGCCATTTTTGGAGGCTGTGGTGCCTGGCGTCTGACTGGCCTGGGAATCCAATCTCTCTTTaGGCGCCGGTGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GSHCHFWRLWCLASDWPGNPISL*APVGGQ
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