RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH23 (Homo sapiens)

Ensembl gene IDs: ENSG00000107736

Ensembl transcript IDs: ENST00000224721.12, ENST00000299366.11, ENST00000398788.4, ENST00000398792.3, ENST00000398809.9, ENST00000442677.4, ENST00000461841.7, ENST00000466757.8, ENST00000470494.5, ENST00000475158.1, ENST00000616684.4, ENST00000619887.4, ENST00000642965.1, ENST00000643732.1, ENST00000644511.1, ENST00000646131.1, ENST00000647092.1

Found 3184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTGTTGAGGTCGGTGGCCAGCAGCGTG +
Preference number: 1 (lower is better)
Translates to: ASAAVSVSSERPRPF*SSSGRLLRSVASSV
Trigger: CACGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCCTTTCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: PFPARLLVPMQGGEH*QPPTLLSLPSPGAC
Trigger: GCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp GGCAGGCTGTTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGC +
Preference number: 1 (lower is better)
Translates to: GRLLRSVASSVPVLP*TTWIPSGPLSSTGG
Trigger: GCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAACAGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTaGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: VWIWRILCGRCARRQ*PRQRSASPASGPGP
Trigger: AGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TGCACAGCTTCCGCCATGGCCGGCCCACCGTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACCGCAGCCACTGTGACTACATGGAAT +
Preference number: 1 (lower is better)
Translates to: CTASAMAGPPSLDSP*RAPRTTAATVTTWN
Trigger: ATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGGCCATGGCGGAAGCTGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 90 bp TGCATCTTCCTCCTGCTGGCCACCTGTCTGCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAG +
Preference number: 1 (lower is better)
Translates to: CIFLLLATCLLFMTL*KPAALDPSRRRAHE
Trigger: CTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAGGAAGATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp GCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTaGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAA +
Preference number: 1 (lower is better)
Translates to: ASHASVPPKPGSLPQ*AGPDSLFGSASESE
Trigger: TTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GCCGTGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTC +
Preference number: 1 (lower is better)
Translates to: AVHHMDPIGPLELHW*LVAEAQATLPWAVV
Trigger: GACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GCTGCCGTGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: AAVHHMDPIGPLELH*WLVAEAQATLPWAV
Trigger: CACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTTGTGGCGG +
Preference number: 1 (lower is better)
Translates to: LRSVASSVPVLPCTT*IPSGPLSSTGGLWR
Trigger: CCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CCCCGACCGGCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACCCACAAGGCTTCCCTGTCTAGTCAC +
Preference number: 1 (lower is better)
Translates to: PRPALSLPLLPGRGR*MGAAHTHKASLSSH
Trigger: GTGACTAGACAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: TTWIPSGPLSSTGGL*RKRRLPCPGLWSPG
Trigger: GCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCTGGTACTGGG +
Preference number: 1 (lower is better)
Translates to: GPHLHPLRLSRCPRG*RVVSAQALSAAGTG
Trigger: CCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CGATCGCGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCA +
Preference number: 1 (lower is better)
Translates to: RSRWGPHLHPLRLSR*PRGCRVVSAQALSA
Trigger: TGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GCCGGCTGCGATGAAGTAGTACACGATCGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGG +
Preference number: 1 (lower is better)
Translates to: AGCDEVVHDRVGALI*IHCACHVAHEGAAW
Trigger: CCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTACTACTTCATCGCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCCTTGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGT +
Preference number: 1 (lower is better)
Translates to: PLSSTGGLWRKRRLP*PGLWSPGSSSSSVC
Trigger: ACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCCAGGGCCACCTGCAGCGGCTGCATAGTCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTACACCGCCTGC +
Preference number: 1 (lower is better)
Translates to: SRATCSGCIVSYGTG*PRSLATKMRLYTAC
Trigger: GCAGGCGGTGTACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp AACGCGCACCTCCTGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATTGCTGGAGGC +
Preference number: 1 (lower is better)
Translates to: NAHLLQCEVSNQVEG*GGSTGRCPAAIAGG
Trigger: GCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GACCGGCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACAAGGCTTCCCTGTCTAGTCACAGCT +
Preference number: 1 (lower is better)
Translates to: DRPCPCPCSLGGDGG*VLLTPTRLPCLVTA
Trigger: AGCTGTGACTAGACAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp ACCACACTGGGCCTGCACTCCGGCACTGACAGCACCATTCTGGGCTaGGGCCCCTCCACTTCCTTGAGAGGGCCCAGCCAGTGCTCTCCA +
Preference number: 1 (lower is better)
Translates to: TTLGLHSGTDSTILG*GPSTSLRGPSQCSP
Trigger: TGGAGAGCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGTCAGTGCCGGAGTGCAGGCCCAGTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CCCGGTTGCCCGCAGTCTTCAGGAAGCTGTAGCGCACCGCCCCGTTaGGGCCCTCATCCTTGTCCGTGGCGTAGACCTCGTACACGTTGG +
Preference number: 1 (lower is better)
Translates to: PGCPQSSGSCSAPPR*GPHPCPWRRPRTRW
Trigger: CCAACGTGTACGAGGTCTACGCCACGGACAAGGATGAGGGCCTCAACGGGGCGGTGCGCTACAGCTTCCTGAAGACTGCGGGCAACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp TGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: CIHCACHVAHEGAAW*VLRHCQQLVLGAAF
Trigger: AAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp AGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACTGGCTGGCCCAGGTCGCTGGCCACC +
Preference number: 1 (lower is better)
Translates to: RGSLSSMSSRATCSG*IVSYGTGWPRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTGCCTTTTGGA +
Preference number: 1 (lower is better)
Translates to: STAPVTLPTRVPRGE*SGTVSSWYWGLPFG
Trigger: TCCAAAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCG +
Preference number: 1 (lower is better)
Translates to: EVCAGVWIWRILCGR*ARRQWPRQRSASPA
Trigger: CGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp TCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCG +
Preference number: 1 (lower is better)
Translates to: SRREVCAGVWIWRIL*GRCARRQWPRQRSA
Trigger: CGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGG +
Preference number: 1 (lower is better)
Translates to: LDVQQRGMWRKCSET*TGVGCPASRGCPRW
Trigger: CCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 90 bp GAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAG +
Preference number: 1 (lower is better)
Translates to: ELHWWLVAEAQATLP*AVVSWLLVQLSLYQ
Trigger: CTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTaGCCCCCTCCCCATGCTCATCGCCCTGGCCTGCATCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: LSLSSRHSRDPCRGN*PPPHAHRPGLHLPP
Trigger: AGGAGGAAGATGCAGGCCAGGGCGATGAGCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CAGGTAGACAGGGATCTCAGCTGCCCGGGGCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTTGAGCCAGTGCACCTCCTCGTAGTC +
Preference number: 1 (lower is better)
Translates to: QVDRDLSCPGRGPVV*GPHGKVEPVHLLVV
Trigger: GACTACGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTCTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGTGTAGGTGACCAGCCCATTAAGGCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGTCCCAGGGGTGGCCCCCTCCAGGAT +
Preference number: 1 (lower is better)
Translates to: GVGDQPIKALVRVHG*HSNECGPRGGPLQD
Trigger: ATCCTGGAGGGGGCCACCCCTGGGACCACACTCATTGCTGTGGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCTGGTCACCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CACAGGTCGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGCTCCAGGTTCCGACAGAAGGGATCC +
Preference number: 1 (lower is better)
Translates to: HRSAISLRFSGRSSS*SAWAASSRFRQKGS
Trigger: GGATCCCTTCTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCGACCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTGCTGTGACAGAGTaGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCCACCT +
Preference number: 1 (lower is better)
Translates to: SRRLPSEARAGAVTE*QEAGHFQQLEVMPP
Trigger: AGGTGGCATCACCTCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp CTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATTGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: LVAEAQATLPWAVVS*LLVQLSLYQLDWPL
Trigger: GAGGGGCCAATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR CCA 90 bp ACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAG +
Preference number: 1 (lower is better)
Translates to: TGGLWRKRRLPCPGL*SPGSSSSSVCISSE
Trigger: CTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp CCCCGAAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGC +
Preference number: 1 (lower is better)
Translates to: PRSSLHAQASALSQR*SSEEHLPLCRPPRC
Trigger: GCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGG +
Preference number: 1 (lower is better)
Translates to: LGPQCPPRSSRGCRP*RGRRCAECRPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCA +
Preference number: 1 (lower is better)
Translates to: RGGWSLMSSSTTRTS*SVRSATRSRVGEGP
Trigger: TGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GTCCCTCAGGATGTAGATGCCGATGATGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCT +
Preference number: 1 (lower is better)
Translates to: VPQDVDADDGRVVVA*QVSGHNVHHEVAGA
Trigger: AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGCATCTACATCCTGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCCCCAGTGACCCTCCTTACCTTGTCC +
Preference number: 1 (lower is better)
Translates to: GGGPVWPLSAQPEPS*SPDSWAPVTLLTLS
Trigger: GGACAAGGTAAGGAGGGTCACTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTaGGAAGAGCCAGGAGCAAATCCTCGGGAGGCACCACCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: RSPGSQSRVIQLQSP*EEPGANPREAPPEA
Trigger: AGCCTCTGGTGGTGCCTCCCGAGGATTTGCTCCTGGCTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR CCA 90 bp GGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAGGGTGTAGGTGACCAGCCCATTAAG +
Preference number: 1 (lower is better)
Translates to: GNDLPCRGVLQLDIP*GHQVQQGVGDQPIK
Trigger: CTTAATGGGCTGGTCACCTACACCCTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ATCGATGTCCTCCAGGGCCACCTGCAGCGGCTGCATAGTCTCGTATaGCACTGGCTGGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTA +
Preference number: 1 (lower is better)
Translates to: IDVLQGHLQRLHSLV*HWLAQVAGHQDEAV
Trigger: TACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGA +
Preference number: 1 (lower is better)
Translates to: LVAEAQATLPWAVVS*LLVQLSLYQLRDGG
Trigger: TCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp GTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTCAGC +
Preference number: 1 (lower is better)
Translates to: VVANVCIQGQHLDQL*AHLGVGGHPCSVLS
Trigger: GCTGAGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CTCACGAAAAGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCGTATGGCACTGGCTGGCCCAGGTCG +
Preference number: 1 (lower is better)
Translates to: LTKRGSLSSMSSRAT*SGCIVSYGTGWPRS
Trigger: CGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCTTTTCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGGGGCTGTT +
Preference number: 1 (lower is better)
Translates to: LDGSPQVSVIIRLDS*WLTPKSSMGARGAV
Trigger: AACAGCCCCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CAAGCCCGGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGACT +
Preference number: 1 (lower is better)
Translates to: QAREPAPVGRPRFPV*LSLRVGNPIVGKET
Trigger: AGTCTCTTTACCAACTATGGGGTTTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCCGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GCAACCAGCTCCCGATTCATGGGGGACTTCACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGC +
Preference number: 1 (lower is better)
Translates to: ATSSRFMGDFTITDP*AASSSSSSSSSYSR
Trigger: GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GTGGCCACCCCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: VATPAVYSALVKRGG*SLMSSSTTRTSCSV
Trigger: CACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGGGGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGATT +
Preference number: 1 (lower is better)
Translates to: TGGLWRKRRLPCPGL*SPGSSSSSVCISLI
Trigger: AATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 90 bp CATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGG +
Preference number: 1 (lower is better)
Translates to: HTPGWQPAGIGHHQA*QLLAHAQKFHGCAW
Trigger: CCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GGATTGAAGATGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTaGTGTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: GLKMIEEAPFRGQGG*CDRVARGRAFPAAG
Trigger: TCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp GGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAAGCAGTCTGGGACACACACTCACCC +
Preference number: 1 (lower is better)
Translates to: GLPVDPPASETGAAG*RKTVAQAVWDTHSP
Trigger: GGGTGAGTGTGTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 90 bp CATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTaGTGCAGGCTGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACAC +
Preference number: 1 (lower is better)
Translates to: HPPRSTCRSSCFRDR*CRLQEDSGPSSLGH
Trigger: GTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp TCGGACCTCAGTTTCCCACCTGTCGTGGGAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAATCCCCACGGGGCCAGGCAGGTGAAA +
Preference number: 1 (lower is better)
Translates to: SDLSFPPVVGASWTA*GSSHRNPHGARQVK
Trigger: TTTCACCTGCCTGGCCCCGTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACTGAGGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp AAGACAAGGCTGTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCA +
Preference number: 1 (lower is better)
Translates to: KTRLLLPMSASRAST*INSEPTLASVATPA
Trigger: TGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAACAGCCTTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp ACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: TNMPPHPPRSTCRSS*FRDRCCRLQEDSGP
Trigger: TGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp ACCGAGGTGCCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGCCGGCAGTCATTGACATCCAGCACT +
Preference number: 1 (lower is better)
Translates to: TEVPAGSFSYTLVLN*GLENCGRQSLTSST
Trigger: AGTGCTGGATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGGCACCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: TRSTSRMRLVSRFTT*ISSSVCAKFTRPFL
Trigger: CAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCATCCTGGACGTGGACCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGACGTTGTAGTTCCGGAAAAGATTCC +
Preference number: 1 (lower is better)
Translates to: SPSAGQTCHPAAGQR*QAARPGRCSSGKDS
Trigger: GGAATCTTTTCCGGAACTACAACGTCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp ACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 1 (lower is better)
Translates to: TTFSSEPLIGPSRMI*PSLAMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 90 bp GGCAGGAGGAGGCTTTTTGCACCATCCGCTGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCT +
Preference number: 1 (lower is better)
Translates to: GRRRLFAPSAVQRAF*AAGNPPGPPSAASP
Trigger: AGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 90 bp AACTGTGGCTTATGCTTCACACACACCCACTCTGTGAAGCCCTCCTaGCTGGAGCCGCCCCTACTGTCTCCTACCTCTCTTGGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: NCGLCFTHTHSVKPS*LEPPLLSPTSLGEE
Trigger: TTCCTCCCCAAGAGAGGTAGGAGACAGTAGGGGCGGCTCCAGGCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp ATCTGTGGCCACCACGGTCAGACTGAACTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAA +
Preference number: 1 (lower is better)
Translates to: ICGHHGQTELLVGLQ*PLCGHQARVHVHME
Trigger: TTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGGCCACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATaGACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAG +
Preference number: 1 (lower is better)
Translates to: QGSSLGIMGPYLPLE*TLVDAPRPCNQQVQ
Trigger: CTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 90 bp TGTCCAGCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATaGGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: CPAPHFDSPVLCTEV*GFCVQSEAWPSLGV
Trigger: CACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CAGCCTCCTGGTAGGAGGGCTGGTCAAAGATGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGTAGACAGGGATCTCAGCTGCCCGGG +
Preference number: 1 (lower is better)
Translates to: QPPGRRAGQRWGCCH*CPRFPGRQGSQLPG
Trigger: CCCGGGCAGCTGAGATCCCTGTCTACCTGGAAATCGTGGACATCAATGACAACAACCCCATCTTTGACCAGCCCTCCTACCAGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp CCAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTTGGTGAGTaGTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGC +
Preference number: 1 (lower is better)
Translates to: PSPAHTRDAICGFGE*FADDPSKQSHPRMG
Trigger: GCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp GTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATaGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCG +
Preference number: 1 (lower is better)
Translates to: VSALLMTRQSSPTPG*ASQNPKPLTSPHNA
Trigger: CGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 90 bp ACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGTaGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCG +
Preference number: 1 (lower is better)
Translates to: TLSVLTMAPVMLESR*MNSSSKPRTRSGIS
Trigger: CGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 90 bp CAGAGCGCTCTGGTAGGTCGCTGGCATTGTCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCA +
Preference number: 1 (lower is better)
Translates to: QSALVGRWHCQSLRE*PHRWQPAPDSWGTS
Trigger: TGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTGACAATGCCAGCGACCTACCAGAGCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCGT +
Preference number: 1 (lower is better)
Translates to: LDERLLVKRCALVVI*AFGLRLHRVQPGAR
Trigger: ACGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 90 bp CCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCT +
Preference number: 1 (lower is better)
Translates to: PSRMIWPSLAMLSYS*MAARRYRSSSGLTA
Trigger: AGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp TCCAGCTCAGTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATGGCAGCCCGC +
Preference number: 1 (lower is better)
Translates to: SSSVCISLIGPSRMI*PSLAMLSYSWMAAR
Trigger: GCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGACTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 90 bp AAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGAGGGTTAAACACTTTGGTCAGGTCC +
Preference number: 1 (lower is better)
Translates to: KAVPPQDGLLRIPNP*PLLTTRGLNTLVRS
Trigger: GGACCTGACCAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp ACTCCAGGAAAACTGAAAGACCTGTCACCCACTAACTGTGGCTTATaGTTCACACACACCCACTCTGTGAAGCCCTCCTGCCTGGAGCCG +
Preference number: 1 (lower is better)
Translates to: TPGKLKDLSPTNCGL*FTHTHSVKPSCLEP
Trigger: CGGCTCCAGGCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGTGGGTGACAGGTCTTTCAGTTTTCCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp CTTCAGAGTCGTTGGCAAGGGCCCGGAAGTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTGCATCCAGGG +
Preference number: 1 (lower is better)
Translates to: LQSRWQGPGSSGWPE*CRRQGCCCQCLHPG
Trigger: CCCTGGATGCAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACGACTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp ATGCGGTTGGTATCGCGGTTCACCACGTGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGAACTGCACA +
Preference number: 1 (lower is better)
Translates to: MRLVSRFTTWISSSV*AKFTRPFLSTWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp AGAGATGGAGGAGTGGCAGGAGGAGGCTTTTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCGCAGGTAATCCTCCAGGACCACCTT +
Preference number: 1 (lower is better)
Translates to: RDGGVAGGGFLHHPL*KELFEPQVILQDHL
Trigger: AAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 90 bp CTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTaGCCAAGGCAGTCAGGATATAGTGGTCCTTCTTCTCCCGGTCCA +
Preference number: 1 (lower is better)
Translates to: LNFRDGCWLHPQGCL*PRQSGYSGPSSPGP
Trigger: TGGACCGGGAGAAGAAGGACCACTATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp CCAGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGTCTTTGGCCAAGGCAGTCAGGATAT +
Preference number: 1 (lower is better)
Translates to: PALGSPPALNFRDGC*LHPQGCLWPRQSGY
Trigger: ATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 90 bp GGCCCACATCTTCAGAGTCGTTGGCAAGGGCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTG +
Preference number: 1 (lower is better)
Translates to: GPHLQSRWQGPGSSG*PECCRRQGCCCQCL
Trigger: CAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACGACTCTGAAGATGTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 90 bp GAGAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTCCAGCAGAGAGGGATGTGGCGGAAA +
Preference number: 1 (lower is better)
Translates to: ENACSLTLTFLSTWG*HLHLDVQQRGMWRK
Trigger: TTTCCGCCACATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 90 bp TCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAA +
Preference number: 1 (lower is better)
Translates to: SLATEALPSRCQSPA*RSCQMAKVPFSQVK
Trigger: TTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp CAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGCATC +
Preference number: 1 (lower is better)
Translates to: QHGEVAKWQRFPLVK*NAQPTPGPRHCPGI
Trigger: GATGCCAGGACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp TTAACCTGTGATGTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTaGCCCCATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTG +
Preference number: 1 (lower is better)
Translates to: LTCDVAMMLSSLTVP*PHPHSLGKSSLYPL
Trigger: CAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCACATCACAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 90 bp GTTTTCCATCGACAAGGACCGTCTGCTGCACTGCGTCTAATGGGATaGTCTTCAGTGGGAAAGGAAATGCCCTGTCAGGTGTATGATGTC +
Preference number: 1 (lower is better)
Translates to: VFHRQGPSAALRLMG*SSVGKEMPCQVYDV
Trigger: GACATCATACACCTGACAGGGCATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGATGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 90 bp ATTGAGCCAAAAGCTCAGCCTGGTTTTCCATCGACAAGGACCGTCTaGTGCACTGCGTCTAATGGGATGATCTTCAGTGGGAAAGGAAAT +
Preference number: 1 (lower is better)
Translates to: IEPKAQPGFPSTRTV*CTASNGMIFSGKGN
Trigger: ATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGATGGAAAACCAGGCTGAGCTTTTGGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp GAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAACTTACCAAGAGGACCTTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EAHCPFLPSQSDLKK*VRLHKKLTKRTLEK
Trigger: CTTCTCCAAGGTCCTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 90 bp CTACAGGTACCTAACACCACACTTGGCCATCTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGTGCACACAGAAGGAGCTCAACCAAT +
Preference number: 1 (lower is better)
Translates to: LQVPNTTLGHLKDIL*QRGECCAHRRSSTN
Trigger: ATTGGTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR TCA 90 bp AGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAAGAG +
Preference number: 1 (lower is better)
Translates to: RLYWRSPLSLPSKSI*SQKVSPASQETYQE
Trigger: CTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTCTCCAATAGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCATCTGCCTGGTaGCCTGTGGGAGCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPASAW*PVGAAA
Trigger: GGCAGCTGCTCCCACAGGGCACCAGGCAGATGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GCCCTTTCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATaGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ALSCPPPGPDAGRGA*PASHASVPPKPGSL
Trigger: CAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAAAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCCTTGCCCTCCAGGTaGCAAAGCCCAGCATGGAGA +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPALPSR*QSPAWR
Trigger: TCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: WTGVGCPASRGCPRWASLWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCGTGCCCGTGCTGCCGTGCACCACATGGATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGC +
Preference number: 2 (lower is better)
Translates to: SVPVLPCTTWIPSGP*SSTGGLWRKRRLPC
Trigger: GCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACAGCCTCCCCGAGGGTaGGATGGTCTGGACCTCTCC +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSQPPRG*DGLDLS
Trigger: GGAGAGGTCCAGACCATCCCACCCTCGGGGAGGCTG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGA +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPRIPNP*PLLTTR
Trigger: TCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCATCCAGCAGCTGGAGGTaGTGCCACCTGGACTCGGAG +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSSSSWR*CHLDSE
Trigger: CTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGA...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPQGGEH*QPPTLL
Trigger: CAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCTTTCTCCCTGAGAAATaGGAGAACTCAGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPFLPEK*ENSGLP
Trigger: GGGCAGCCCTGAGTTCTCCCATTTCTCAGGGAGAAA...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp ACGATCGCGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TIALGPSSASTAPVT*PTRVPRGECSGTVS
Trigger: GCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp TGCACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: CTTWIPSGPLSSTGG*WRKRRLPCPGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: WTGVGCPASRGCPRWASLTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGAGGGAGGACCTGGGCTaGCCAGCTCCTGTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMREDLG*PAPVPV
Trigger: GACTGGGACAGGAGCTGGGCAGCCCAGGTCCTCCCT...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCTGAAG*RKTVAQ
Trigger: TTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGT...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 2 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAAGGAGTGAGCTCTaGCTTGCCACTCCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPRSEL*LATPQL
Trigger: GAGCTGGGGAGTGGCAAGCCAGAGCTCACTCCTTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: IWRILCGRCARRQWPRQRSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGASYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGGG +
Preference number: 2 (lower is better)
Translates to: VPAGRRSKQGSPSMV*AAVLVAPLQGTHVG
Trigger: CCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCCAGCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATTGCTGGAGGCCTaGACGATGAAGGAGAAGATGGCTTCTCGCTCCCGGTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: GEGPRGGVQLRLLEA*TMKEKMASRSRSRS
Trigger: GGACCTGGACCGGGAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RSLCRGVDLADSVRA*RSKAVASAAVSVSS
Trigger: GCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: CGVELGGRRACLASFSSAGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGCGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGA +
Preference number: 2 (lower is better)
Translates to: EGGELEVSALSTGGSGCSPRFPV*LSLRVG
Trigger: TCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGTCTTGGTGGAAGCTaGCATAACACAGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPSLGGS*HNTEPH
Trigger: ATGAGGCTCTGTGTTATGCCAGCTTCCACCAAGACT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: GMWRKCSETWTGVGCPASAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: PVGNDLPCRGVLQLDIPWAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAALRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAAGTGGAAGCCCATTTaGAGTGGAGAGCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVKWKPI*SGELRG
Trigger: GCCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTT...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp AGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTCCAGCTGCGATaGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCC +
Preference number: 2 (lower is better)
Translates to: RSRVGEGPRGGVQLR*LEALTMKEKMASRS
Trigger: GGAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCCAACCCTCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCG +
Preference number: 2 (lower is better)
Translates to: GVSMITSRSLCRGVD*ADSVRALRSKAVAS
Trigger: CGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGTCAGGTCCCAAATTTaGAGGGTGGGCAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLVRSQI*RVGRGR
Trigger: CCTCCCTCTGCCCACCCTTCAAATTTGGGACCTGAC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 2 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: WTSSREGCGGNVARLGLESRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGCCAAGGAGTGAGCTCTaGCTTGTCACTCCCCACCTC +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMPRSEL*LVTPHL
Trigger: GAGGTGGGGAGTGACAAGCCAGAGCTCACTCCTTGG...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGTCAACTCTCCATTaGGACCTTCATCCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRSTLH*DLHPGQ
Trigger: CTGACCAGGATGAAGGTCCCAATGGAGAGTTGACCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 2 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: VVACQVSGHNVHHEVAGARPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 2 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCAGGGGCTGAGGCTCTaGCAAGAAGAAAAGGTAGCA +
Preference number: 2 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGQGLRL*QEEKVA
Trigger: TGCTACCTTTTCTTCTTGCCAGAGCCTCAGCCCCTG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp TGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGTGC +
Preference number: 2 (lower is better)
Translates to: WPLFRAPTLGSIRKG*KMIEEAPFRGQGGC
Trigger: GCACCCGCCCTGGCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCATaGACGTCGATGACCTCCACCAGGAGCATGGTGGTGCCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RMVPLGGRTKTGRLS*TSMTSTRSMVVPQS
Trigger: ACTCTGGGGCACCACCATGCTCCTGGTGGAGGTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp ATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACCTCCACCAGGAGCATGGTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: MWRMVPLGGRTKTGR*SLTSMTSTRSMVVP
Trigger: GGGCACCACCATGCTCCTGGTGGAGGTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCTTGGTGAAGCGTGGTGGCTGGTCGTTGATGTCCTCTAGCACAACGCGCACCCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: ALVKRGGWSLMSSSTTRTRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 2 (lower is better)
Translates to: RTRSGISLMTILTRWSSLAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCACCAGCTTGGGAGCTTaGAGAGAGCCAGACATTGTC +
Preference number: 2 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPTSLGA*REPDIV
Trigger: GACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGT...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTATCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLSLDSP*RAPRTT
Trigger: GGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGA...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAGGGAGGGCTCTCAATTaGGTTTCAGGCACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: MRTGHRPLVCMADGHRVEGRALN*VSGTRP
Trigger: TGGCCTGGTGCCTGAAACCCAATTGAGAGCCCTCCC...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCCCAGCTCCCGATTCATaGGGGACTTCACCATTACAG +
Preference number: 2 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSPAPDS*GTSPLQ
Trigger: CTGTAATGGTGAAGTCCCCCATGAATCGGGAGCTGG...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CATCCAGGGCCAGCACCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCAGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 2 (lower is better)
Translates to: HPGPAPGSTLSPPWRRWPGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...TGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIADGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CAA 90 bp TTGGAGCGCAGCGGGATCTCCTCTCTGATGTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACAGGGCGGTTGTCATTGACGTCGATG +
Preference number: 2 (lower is better)
Translates to: LERSGISSLMWRMVP*GGRTKTGRLSLTSM
Trigger: CATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAGAGAGGAGATCCCGCTGCGCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTCCCCACCCAGCAACTaGGGCCTCTGGGCAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGSPPSN*GLWAEV
Trigger: CACCTCTGCCCAGAGGCCTCAGTTGCTGGGTGGGGA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: APVTLPTRVPRGECSGTVWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTCAGCGCAGTGTGCAGTaGCCTCTGGGAGCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGQRSVQ*PLGAGS
Trigger: GGAGCCAGCTCCCAGAGGGCACTGCACACTGCGCTG...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGGGCTCACGAGTGCATaGCCCACCACCCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLGLTSA*PTTLGA
Trigger: GGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: RTRSGISLMTILTRWSSLGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: QQRGMWRKCSETWTGVGCGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...ACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp AAAAACATGGCAAGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTCCTGCCCGCCTCCTaGTCCCGATGCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: KNMARTQLNTPVGPQFAAFLPAS*SRCREG
Trigger: CCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGAA...AGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCTTGCCATGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 2 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 2 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 2 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGGTCAGCAGCTGGTACTaGGGGCTGCCTTTTGGAGGC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAVSSWY*GLPFGG
Trigger: GCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGAC...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAASRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCCCCGGAAGTAGTGGATaGCCAGAATGCTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGPGSSG*PECCRR
Trigger: TCTTCTACAGCATTCTGGCCATCCACTACTTCCGGG...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp TGGTCTTGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTaGGGATCAATCAGGAAGGGATTGAAGATGATCGAGGAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: WSWQPSWWPLFRAPT*GSIRKGLKMIEEAP
Trigger: GGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCGTCTaGGTGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAA +
Preference number: 2 (lower is better)
Translates to: RRSKQGSPSMVLAAV*VAPLQGTHVGINQE
Trigger: TTCCTGATTGATCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp CGTAACCACCTCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGCCTaGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: RNHLLEAAPSLATEA*PSRCQSPAWRSCQM
Trigger: CATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGAGGGTGCTGCTTCTAGGAGGTGGTTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 90 bp ACCCCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: TPAVYSALVKRGGWS*MSSSTTRTSCSVRS
Trigger: TGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGG +
Preference number: 2 (lower is better)
Translates to: SSEPLIGPSRMIWPS*AMLSYSWMAARRYR
Trigger: CCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGCCAACAGTAGAGCCCTaGCCTCTTTTCCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: DEATFLQVTALSPRLGAGPTVEP*PLFHPH
Trigger: GTGAGGGTGGAAAAGAGGTCAGGGCTCTACTGTTGG...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR TCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGGGCATTGTCAATCACTaGGAGAGTGACCTCATAGGT +
Preference number: 2 (lower is better)
Translates to: IWRILCGRCARRQWPRQRGIVNH*ESDLIG
Trigger: ACCTATGAGGTCACTCTCTCAGTGATTGACAATGCC...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACCCGTGGTGGGGTTaGTGGCAAACTTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAAHPWWG*WQTCSL
Trigger: GAGAGAGCAAGTTTGCCATCAACCCCACCACGGGTG...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 2 (lower is better)
Translates to: MNSSSKPRTRSGISLMTIAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILITVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GAGAGTGACCTCATAGGTGGCAACCAGCTCCCGATTCATGGGGGACTTCACCATGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: ESDLIGGNQLPIHGGLHHGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAAGATGCTCCCCGTCCCTaGAACCAACAGGTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SGAQGSSLGIMGPYLPLEDAPRP*NQQVQE
Trigger: CTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC...TTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTTGCTGTGACCCACAGTaGAGCCAGCCACGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGCCDPQ*SQPRLP
Trigger: GGGGAGACGTGGCTGGCTGCACTGTGGGTCACAGCA...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 2 (lower is better)
Translates to: NGPSDVGEQVDELLLEAATTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 2 (lower is better)
Translates to: GVWIWRILCGRCARRQWPALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: PPALNFRDGCWLHPQGCLEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...AAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCTGTCATACTCCTGGATaGCAGCCCGCAGGTATCGGT +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCCHTPG*QPAGIG
Trigger: ACCGATACCTGCGGGCTGCCATCCAGGAGTATGACA...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCCTCCTGGTCCCGATaGAGGGAGGGGAGCATTGCC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGASWSR*REGSIA
Trigger: GGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 2 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTTCTGTTTATAAGCTaGGCACACATTTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLLFIS*AHIWEA
Trigger: GGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGTGGCAGCCGTCTTGGTaGCCCCTCTTCAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGWQPSW*PLFRAP
Trigger: GGGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCA...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp TCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTTCGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: STNMPPHPPRSTCRSSCFGHLGL*PEAPQG
Trigger: ACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACC...GAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCCCAGCCACACAGGGTTaGCTCCATCAAAGGAGTACT +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCPATQG*LHQRST
Trigger: AGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGG...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTaGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: VGSQVLPTLGMLSVV*VSALLMTRQSSPTP
Trigger: TGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CTGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATAGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: LVSGHHGDDRGARRLILIECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...TATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 2 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: QNRREHQSLLFISWAHIWALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACTAACTGTGGCTTATaGTTCACACACACCCACTCT +
Preference number: 2 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLTNCGL*FTHTHS
Trigger: AGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGT...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCGAAGCTCCTTGCATaGCCAGGCCAGCGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPKLLA*PGQRPF
Trigger: GAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR GCA 90 bp CCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: PPALNFRDGCWLHPQGCLWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...AAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAAGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp TGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WISSSVCAKFTRPFLSTWTITDP*AASSSS
Trigger: GGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGT...CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGAGTCAGCTTGGCATTTaGCACACTGACAGAGCGCTC +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMSQLGI*HTDRAL
Trigger: GAGCGCTCTGTCAGTGTGCCAAATGCCAAGCTGACT...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGTTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGLTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGC +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLTLVLN*GLENCG
Trigger: GCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGT...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGATGATCGCCATCTGCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATGTTGGGACCTTCATCCTaGTCAGTGGCCATCATGGTG +
Preference number: 2 (lower is better)
Translates to: TMIAICRADMSSGSRTEMLGPSS*SVAIMV
Trigger: CACCATGATGGCCACTGACCAGGATGAAGGTCCCAA...CATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGCAGATGGCGATCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GGCCACAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATGAAGAGGTCGAAATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 2 (lower is better)
Translates to: GHNVHHEVAGAVGHEEVEISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...TTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GTCCTGCCCACACTAGGGATGCTATCTGTGGTTTTGGTGAGTGCTTaGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: VLPTLGMLSVVLVSA*LMTRQSSPTPGWAS
Trigger: AGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp GTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTaGGCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGG +
Preference number: 2 (lower is better)
Translates to: VCISLIGPSRMIWPS*AMLSYSWMAARRYR
Trigger: CCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR CAA 90 bp CCCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCA +
Preference number: 2 (lower is better)
Translates to: PLIGPSRMIWPSLAM*SYSWMAARRYRSSS
Trigger: TGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCACCTGGACGGCAAAAGTGGGATCTaGGCAGCTGATGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: CSLTLTFLSTWGCHLHLDGKSGI*AADAGC
Trigger: GCAGCCCGCATCAGCTGCTCAGATCCCACTTTTGCC...GTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATAACAGGAAGAGGGCCTaGGCTTGGGCCCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDNRKRA*AWAQLH
Trigger: ATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTT...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR TCA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCGGAGAGCTCAGGGGCTaGGGCTCTGGCAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: STWITTCTEFSRRLLATSGELRG*GSGKKK
Trigger: TTTCTTCTTGCCAGAGCCTCAGCCCCTGAGCTCTCC...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTACTTGGATCACCACCTaGACTGAATTTTCGCGACGG +
Preference number: 2 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGTWITT*TEFSRR
Trigger: CCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGT...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGACCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GGGCCCAGCCAGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTGGTCATGAAAGGAACATTCTCTTaGCAGCATGGGTCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: GPSQCSPGGPAHLYPLVMKGTFS*QHGSFL
Trigger: CAAAAAGGACCCATGCTGCCAAGAGAATGTTCCTTT...CATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTCTTGGCAGCCGTCTTaGTGGCCCCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDSWQPS*WPLFRA
Trigger: TGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGA...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGALVVI*AFGLRL
Trigger: GAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATGCCCTCTTGTCTGCATaGCAGATGGGCACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDALLSA*QMGTGW
Trigger: CCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGC...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGCCAAAGGGCTTGAACTaGGGCGTATTGTCATTGACG +
Preference number: 2 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIAPKGLN*GVLSLT
Trigger: CGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGG...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATTTCTCATCGATCATCTaGATCACCCGGTCCACGTCC +
Preference number: 2 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDFSSII*ITRSTS
Trigger: GGACGTGGACCGGGTGATCCAGATGATCGATGAGAA...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTaGACCTCTCCTCACAACGCGAGGGTTAAACACTTTGGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: QSSPTPGWASQNPKP*TSPHNARVKHFGQV
Trigger: GACCTGACCAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp ACATGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGG +
Preference number: 2 (lower is better)
Translates to: TWNCTLSVLTMAPVM*ESRWMNSSSKPRTR
Trigger: CCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCTTGATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCA +
Preference number: 2 (lower is better)
Translates to: SLIGPSRMIWPSLAM*SYSWMAARRYRSSS
Trigger: TGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR-3UTR TCA 90 bp TGGGAATTCTCAACAGGTCCCCAAGGAAGGATGAGGCCACATTCCTCCAAGTCAGGAGCCAGTCCAGAGTaGTCCAGCTGCAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: WEFSTGPQGRMRPHSSKSGASPE*SSCKAL
Trigger: AAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCC...TGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR-3UTR TCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGCACAAGCTGAGGCCCTaGTCGAGAGAACCCTCTACT +
Preference number: 2 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGHKLRP*SREPST
Trigger: AGTAGAGGGTTCTCTCGATCAGGGCCTCAGCTTGTG...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTTGGCCATCAAGAGGAGAGTGCTGTaGACACAGAAGGAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: PSLSSSWDYRYLTPHLAIKRRVL*TQKELN
Trigger: GTTGAGCTCCTTCTGTGTGCACAGCACTCTCCTCTT...GATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR-3UTR GCA 90 bp AGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAACGCGAGGGTGGGAGAACTCAGGGCTaGCCTATATTAACTCGCTGG +
Preference number: 2 (lower is better)
Translates to: RMGFSESQTLDLSSQREGGRTQG*PILTRW
Trigger: CCAGCGAGTTAATATAGGGCAGCCCTGAGTTCTCCC...ACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR GCA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGAAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGSGWPE*CRRQGC
Trigger: ACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACT...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGGCCAAGACACTGTCCTaGCATCTGTGCTGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGAKTLS*HLCWPS
Trigger: ACTGGGCCAGCACAGATGCCAGGACAGTGTCTTGGC...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLFRDGC*LHPQGC
Trigger: ACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLVKRGG*SLMSSS
Trigger: GCTAGAGGACATCAACGACCAGCCACCACGCTTCAC...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCTTGGTGAAGCGTGGTaGCTGGTCGTTGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLLGEAW*LVVDVL
Trigger: GAGGACATCAACGACCAGCCACCACGCTTCACCAAG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp AGCTTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCCCTCACTTaGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTAC +
Preference number: 2 (lower is better)
Translates to: SLGACREPDIVQPLT*TPQFCAQKYEASVY
Trigger: GTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGGGGCTGGACAATGTCTGGCTCTCTGCAAGCTCCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp TCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCT +
Preference number: 2 (lower is better)
Translates to: SSEEHLPLCRPPRCC*MKDFWSRDVHSWSS
Trigger: AGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR TCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCAAGTCCTCACAAGCTaGGGCCCTGATCGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGQVLTS*GPDREN
Trigger: GTTCTCTCGATCAGGGCCTCAGCTTGTGAGGACTTG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLHTRLC*TGAWRT
Trigger: AGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp CGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCAAAAGATTCCGTAGCTaGTCCTTGTTCTCATCGATC +
Preference number: 2 (lower is better)
Translates to: RREVCAGVWIWRILCGRCKRFRS*SLFSSI
Trigger: GATCGATGAGAACAAGGAGCAGCTACGGAATCTTTT...GCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTCGCGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 2 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: REHQSLLFISWAHIWEASQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCATTGACATCCAGCACTTaGATCACCACCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSALTSST*ITTCTE
Trigger: TTCAGTGCAGGTGGTGATCCAAGTGCTGGATGTCAA...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLSRFTT*ISSSVC
Trigger: GCAGACAGAACTGCTTATCCACGTGGTGAACCGCGA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp GGCAGCATGGGTCCTTTTTGTCTATGTCTTCTCTTTCCTACCAGCTaGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCCCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: GSMGPFCLCLLFPTS*GACREPDIVQPLTL
Trigger: CAAAGTGAGGGGCTGGACAATGTCTGGCTCTCTGCAAGCTCCCAAGCTGGTAGGAAAGAGAAGACATAGACAAAAAGGACCCATGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 90 bp AGTCTGTATCAGCTCAGAGATGGAGGAGTGGCAGGAGGAGGCTTTTaGCACCATCCGCTGTGCAAAGAGCTTTTTGAGCCGCAGGTAATC +
Preference number: 2 (lower is better)
Translates to: SLYQLRDGGVAGGGF*HHPLCKELFEPQVI
Trigger: GATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCG +
Preference number: 2 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPSKSI*SQKVSP
Trigger: CGGACTCACTTTTTGAGATCAGATTGACTTGGAAGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGG +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLCSTSS*GQRAWR
Trigger: CCGCCATGCTCTTTGTCCTCATGAACTGGTACTACA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp ATGAGGATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCACCAAGCAGGCTCTATTaGAGAAGCCCACTGTCCCTT +
Preference number: 2 (lower is better)
Translates to: MRIDLKMRTGHRPLVCMAPSRLY*RSPLSL
Trigger: AAGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGG...TGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAATCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTATGCCAAAGCCCAGCATaGAGAAGTTGCCAAATGGCA +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLCQSPA*RSCQMA
Trigger: TGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCA...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTG +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLPSGCR*KFFSSL
Trigger: CAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGG...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 90 bp CCCAGCCTCTCAAGCAGCTGGGACTACAGGTACCTAACACCACACTaGGCCATCTCAAGGACATTTTATGACAAAGAGGAGAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: PSLSSSWDYRYLTPH*AISRTFYDKEESAV
Trigger: CACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGGTACCTGTAGTCCCAGCTGCTTGAGAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTGGGGTTGTTGTCATTaGTGTCCACGATTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLWGCCH*CPRFPG
Trigger: ACCTGGAAATCGTGGACATCAATGACAACAACCCCA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR GCA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATCTGTCTTGTTGCTGTTaGAGGAGCCATGAGCACAGA +
Preference number: 2 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDLSCCC*RSHEHR
Trigger: TCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAG...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAGGAGGAGGGCCTGTTTaGCCTCTTTCAGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGGGGPV*PLSAQP
Trigger: AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCC...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp ATTGATTTGAAAATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGTTACCAAGAGGACCTTaGAGAAGTCATCCTGAGACG +
Preference number: 2 (lower is better)
Translates to: IDLKMRTGHRPLVCMADGLPRGP*RSHPET
Trigger: CGTCTCAGGATGACTTCTCCAAGGTCCTCTTGGTAA...CCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCATTTTCAAATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp GTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTGCCCCCATCCACATTCCCTAGGAGAAGTTGCCAAATaGCAAAGGTTCCCTTTAGTC +
Preference number: 2 (lower is better)
Translates to: VAMMLSSLTVPCPHPHSLGEVAK*QRFPLV
Trigger: GACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCC...TAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGGCTCTGGTAGGTCGCTaGCATTGTCAATCACTGAGA +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRALVGR*HCQSLR
Trigger: TCTCAGTGATTGACAATGCCAGCGACCTACCAGAGC...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp GAATGCTTGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATGCCACCTCCAGTAGAGGTCAGATGCTaGATGAGCGTCTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: ECLFIDIDFLVHVGMPPPVEVRC*MSVWQK
Trigger: CTTTTGCCAGACGCTCATTCAGCATCTGACCTCTAC...TGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACAAGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR TCA 90 bp CTTAGACTTGTGATGTCTCTGGACCTTGCTGTCTTAACCTGTGATGTGGCCATGTTGGAGAAGTCATCCTaGGACGCTGCATTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LRLVMSLDLAVLTCDVAMLEKSS*DAAFLP
Trigger: AGGGAGAAATGCAGCGTCTCAGGATGACTTCTCCAA...CATGGCCACATCACAGGTTAAGACAGCAAGGTCCAGAGACATCACAAGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSDLKK*VRLHKK
Trigger: TTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR TCA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRQGCTQ*VQSCLS
Trigger: ACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTG...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR TCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGAGGTCAGATGCTGAATaGGCGTCTGGCAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLRSDAE*ASGKSG
Trigger: CCCACTTTTGCCAGACGCTCATTCAGCATCTGACCT...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CCA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGATTCTCTTGGCAGCATaGGTCCTTTTTGTCTATGTC +
Preference number: 2 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGILLAA*VLFVYV
Trigger: GACATAGACAAAAAGGACCCATGCTGCCAAGAGAAT...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR GCA 90 bp AACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: NRREHQSLLFISWAHIWEVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...TTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR GCA 90 bp TCAAAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGTGAAATGGAGAGAATaGTTGTTCATTGACATTGAC +
Preference number: 2 (lower is better)
Translates to: SKPEGTSVTSVYKLGTHLVKWRE*LFIDID
Trigger: GTCAATGTCAATGAACAAGCATTCTCTCCATTTCAC...CAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR GCA 72 bp TCCGCCATGGCCGGCCCACCGTCCCTCGACAGCCCCTaGCGGGCCCCGAGGACAACCGCAGCCACTGTGACT +
Preference number: 3 (lower is better)
Translates to: SAMAGPPSLDSP*RAPRTTAATVT
Trigger: AGTCACAGTGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGGCCATGGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp TCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGG +
Preference number: 3 (lower is better)
Translates to: SGQQGMSALGLP*ACLAGGDGACG
Trigger: CCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTCCTCGGGCAGGCTGTaGAGGTCGGTGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: KAVASAAVSVSSERPRPFSSGRL*RSVASS
Trigger: GCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGA...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTaGCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: ARLLVPMQGGEH*QPPTLLSLPSP
Trigger: CGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp CTCCTGCTGGCCACCTGTCTGCTGTTCATGACGCTCTaGAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGG +
Preference number: 3 (lower is better)
Translates to: LLLATCLLFMTL*KPAALDPSRRR
Trigger: CCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTGTTGAGGTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: AVSVSSERPRPF*SSSGRLLRSVA
Trigger: GGCCACCGACCTCAACAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTaGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGC +
Preference number: 3 (lower is better)
Translates to: WRILCGRCARRQ*PRQRSASPASG
Trigger: GCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTGGCCAGCAGCGTGCCCGTGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGC +
Preference number: 3 (lower is better)
Translates to: VASSVPVLPCTT*IPSGPLSSTGG
Trigger: GCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCCCCTCGCTGCTGCTaGATGAAAGACTTCTGGTCA +
Preference number: 3 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPPRCC*MKDFWS
Trigger: TGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp TCCACTGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCTGGCTCCTCGTCCAGC +
Preference number: 3 (lower is better)
Translates to: STGGLWRKRRLP*PGLWSPGSSSS
Trigger: GCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TTGAGGTCGGTGGCCAGCAGCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCGGGCCCCTTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: LRSVASSVPVLP*TTWIPSGPLSS
Trigger: GGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGCG +
Preference number: 3 (lower is better)
Translates to: AGVWIWRILCGR*ARRQWPRQRSA
Trigger: CGCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GCCCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACCCACAAGGCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: ALSLPLLPGRGR*MGAAHTHKASL
Trigger: CAGGGAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 3 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GCATCTTCCTCCTGCTGGCCACCTGTCTGCTGTTCATaGCGCTCTGCAAGCCGGCCGCGCTGGACCCGAGCC +
Preference number: 3 (lower is better)
Translates to: ASSSCWPPVCCS*RSASRPRWTRA
Trigger: GGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGGTGGCCAGCAGGAGGAAGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp GGCCTGCACTCCGGCACTGACAGCACCATTCTGGGCTaGGGCCCCTCCACTTCCTTGAGAGGGCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GLHSGTDSTILG*GPSTSLRGPSQ
Trigger: CTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGTCAGTGCCGGAGTGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp CCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGCTGGTACTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: PVTLPTRVPRGE*SGTVSSWYWGL
Trigger: CAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: WGPHLHPLRLSR*PRGCRVVSAQA
Trigger: TGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTACACGATCGCGTTGGGGCCCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGG +
Preference number: 3 (lower is better)
Translates to: VHDRVGALICIH*ACHVAHEGAAW
Trigger: CCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TGGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTCCTCGTCCAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: WWLVAEAQATLP*AVVSWLLVQLS
Trigger: ACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACATGGATCCCATCGGGCCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAGGCTACCCTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: HMDPIGPLELHW*LVAEAQATLPW
Trigger: CCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACCACATGGATCCCATCGGGCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCGCAGGCTACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: HHMDPIGPLELH*WLVAEAQATLP
Trigger: GGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCGTAGTCCACTGTCCGGTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCGGGGCGGGGACCCGTaGTCTGAGGCCCTCACGGTA +
Preference number: 3 (lower is better)
Translates to: LVVHCPVGNDLPCRGVLQRGGDP*SEALTV
Trigger: TACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCG...CTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAGTGGACTACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCTGGAGGATGGTGCCGTaGGGTGGGCGCACAAAGACA +
Preference number: 3 (lower is better)
Translates to: APVTLPTRVPRGECSGTVWRMVP*GGRTKT
Trigger: TGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCA...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGCAGGGGTGTGGATTaGGCGGATTCTGTGCGGGCG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPCRGVD*ADSVRA
Trigger: CGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp ACAGCACCATTCTGGGCTGAGGCCCCTCCACTTCCTTaGGAGGGCCCAGCCAGTGCTCTCCAGGTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: TAPFWAEAPPLP*EGPASALQVAL
Trigger: CAGGGCCACCTGGAGAGCACTGGCTGGGCCCTCTCAAGGAAGTGGAGGGGCCTCAGCCCAGAATGGTGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp AGGGATCTCAGCTGCCCGGGGCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTTGAGCCAGTGCACCTC +
Preference number: 3 (lower is better)
Translates to: RDLSCPGRGPVV*GPHGKVEPVHL
Trigger: GAGGTGCACTGGCTCAACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCGCCCCGGGCAGCTGAGATCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GACCAGCCCATTAAGGCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGTCCCAGGGGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: DQPIKALVRVHG*HSNECGPRGGP
Trigger: GGGGCCACCCCTGGGACCACACTCATTGCTGTGGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LHPLRLSRCPRG*RVVSAQALSAA
Trigger: AGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAGGGTGTAGGTGACCAG +
Preference number: 3 (lower is better)
Translates to: LPCRGVLQLDIP*GHQVQQGVGDQ
Trigger: CTGGTCACCTACACCCTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCCCTCACGGTAAAGTaGAGCCAGTGCACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPALTVK*SQCTSS
Trigger: CGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTA +
Preference number: 3 (lower is better)
Translates to: GVWIWRILCGRCARRQWPSSTGG*WRKRRL
Trigger: TAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCT...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGCTCCAGGTTCCGACAG +
Preference number: 3 (lower is better)
Translates to: AISLRFSGRSSS*SAWAASSRFRQ
Trigger: CTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTCCCTTCAGAGGCCAGGGCGGGTGCTGTGACAGAGTaGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LPSEARAGAVTE*QEAGHFQQLEV
Trigger: CACCTCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTaGGCGGCCAGCTCCAGGTTCCGACAGAAGGGATCC +
Preference number: 3 (lower is better)
Translates to: LRFSGRSSSCSA*AASSRFRQKGS
Trigger: GGATCCCTTCTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TTGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCCAGCTCAGTCTGTATC +
Preference number: 3 (lower is better)
Translates to: LWRKRRLPCPGL*SPGSSSSSVCI
Trigger: GATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLSPSMV*AAVLVA
Trigger: GGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGA...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCGTGCTGAACTGGGGCTaGGAGAACTGTGGCCGGCAG +
Preference number: 3 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGVLNWG*ENCGRQ
Trigger: CTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCAC...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTAACTCCCAGTCCCGGTaGCCCGCAGTCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: VVACQVSGHNVHHEVAGANSQSR*PAVFRK
Trigger: CTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGTT...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCAACTCTGAGCCCACCTaGGCGTCGGTGGCCACCCCT +
Preference number: 3 (lower is better)
Translates to: EAAHTVGDLVNDDLDALVNSEPT*ASVATP
Trigger: AGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTT...GACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 3 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCATGATGGCCGTGTCGTaGTGGCCTGCCAGGTCTCGG +
Preference number: 3 (lower is better)
Translates to: RTRSGISLMTILTRWSSLMMAVS*WPARSR
Trigger: CCGAGACCTGGCAGGCCACAACGACACGGCCATCAT...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTCGTTAATGACGATCTaGACGCGCTGGTCGTCCCTC +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPSLMTI*TRWSSL
Trigger: GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGDSVRA*RSKAVA
Trigger: GGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATC...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR TCA 72 bp AATGTCTGCATCCAGGGCCAGCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: NVCIQGQHLDQL*AHLGVGGHPCS
Trigger: ACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GAAGTTTGTGCAGGGGTGTGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: EVCAGVWIWRIL*GRCARRQWPRQ
Trigger: CTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTaGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGT +
Preference number: 3 (lower is better)
Translates to: EPAPVGRPRFPV*LSLRVGNPIVG
Trigger: ACCAACTATGGGGTTTCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAGCATaGTCTTGGCAGCCGTCTTGGTGGCCCCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: QLGGGANRALQA*SWQPSWWPLFR
Trigger: CCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp ACCTGCAGCGGCTGCATAGTCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACCAAGATGAGGCTGTAC +
Preference number: 3 (lower is better)
Translates to: TCSGCIVSYGTG*PRSLATKMRLY
Trigger: GTACAGCCTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCTaGTACTGGGGGCTGCCTTTTGGAGGCCTCACGAAA +
Preference number: 3 (lower is better)
Translates to: VPRGECSGTVSS*YWGLPFGGLTK
Trigger: TTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CGCAGAATGCCGTCCATGCTCCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCGTTGGCAAGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: RRMPSMLPMVKT*PTSSESLARAR
Trigger: CCGGGCCCTTGCCAACGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGGGAGCATGGACGGCATTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GCAGGGCAGACATGTCATCCGGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGACGTTGTAGTTCCGGA +
Preference number: 3 (lower is better)
Translates to: AGQTCHPAAGQR*QAARPGRCSSG
Trigger: TCCGGAACTACAACGTCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGCCGGATGACATGTCTGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: EAQATLPWAVVS*LLVQLSLYQLR
Trigger: TCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp CTCATCGATCATCTGGATCACCCGGTCCACGTCCAGGATGCGGTTGGTATCGCGAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: LIDHLDHPVHVQDAVGIARAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...CGCGATACCAACCGCATCCTGGACGTGGACCGGGTGATCCAGATGATCGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 3 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGCGTGGTGGCTGGTCGTaGATGTCCTCTAGCACAACG +
Preference number: 3 (lower is better)
Translates to: MLESRWMNSSSKPRTRSGRGGWS*MSSSTT
Trigger: CGTTGTGCTAGAGGACATCAACGACCAGCCACCACG...CCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTGCACATTGTCAGTATaGACAATGGCCCCAGTGATG +
Preference number: 3 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPCTLSV*TMAPVM
Trigger: CATCACTGGGGCCATTGTCAATACTGACAATGTGCA...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGCCCAGCTTGGCAATGTaGTCATACTCCTGGATGGCA +
Preference number: 3 (lower is better)
Translates to: IWRILCGRCARRQWPRQRPSLAM*SYSWMA
Trigger: TGCCATCCAGGAGTATGACAACATTGCCAAGCTGGG...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTATCACGTCGCGAAGTTaGTGCAGGGGTGTGGATTTG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPITSRS*CRGVDL
Trigger: CAAATCCACACCCCTGCACAAACTTCGCGACGTGAT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTaGTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: PPHPPRSTCRSS*FRDRCCRLQED
Trigger: GTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp AGGGGTTCGTTGTCATCGATGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCGTATGGCACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: RGSLSSMSSRAT*SGCIVSYGTGW
Trigger: CCAGCCAGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTaGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGT +
Preference number: 3 (lower is better)
Translates to: QQRGMWRKCSET*TGVGCPASRGC
Trigger: ACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp TGCCACCTCCACCTGGACGTCCAGCAGAGAGGGATGTaGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGG +
Preference number: 3 (lower is better)
Translates to: CHLHLDVQQRGM*RKCSETWTGVG
Trigger: CCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp GGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTTTaGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCG +
Preference number: 3 (lower is better)
Translates to: GQEMCTRGHLGL*PEAPQGTTWGS
Trigger: CGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp AGTTTCCCACCTGTCGTGGGAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAATCCCCACGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SFPPVVGASWTA*GSSHRNPHGAR
Trigger: CCTGGCCCCGTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp TCCCGATTCATGGGGGACTTCACCATTACAGATCCCTaGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SRFMGDFTITDP*AASSSSSSSSS
Trigger: GGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGTAATGGTGAAGTCCCCCATGAATCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GTCCAGGCGCTGAGCAGTCTGGATGAGGCCGCTGATTaGGTCGATGATGAAGAACTCCCAGTCCCGGTTGCC +
Preference number: 3 (lower is better)
Translates to: VQALSSLDEAAD*VDDEELPVPVA
Trigger: GGCAACCGGGACTGGGAGTTCTTCATCATCGACCCAATCAGCGGCCTCATCCAGACTGCTCAGCGCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CTGTTGTTGCCAATGTCTGCATCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LLLPMSASRAST*INSEPTLASVA
Trigger: GGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCCATGGGTGCGCGTGGG +
Preference number: 3 (lower is better)
Translates to: PQVSVIIRLDSC*LTPKSSMGARG
Trigger: CCCACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GAAGCGCAGGCTACCCTGCCCTGGGCTGTGGTCTCCTaGCTCCTCGTCCAGCTCAGTCTGTATCAGCTTGAT +
Preference number: 3 (lower is better)
Translates to: EAQATLPWAVVS*LLVQLSLYQLD
Trigger: ATCAAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGGGGAGGAGGGCCTGTTaGGCCTCTTTCAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: WTSSREGCGGNVARLGLEGRRAC*ASFSSA
Trigger: GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCC...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp CATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: HLHPLRLSRCPRGCRVVSGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...ACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCCGATGATGGCCGTGTCGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACTGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 3 (lower is better)
Translates to: ADDGRVVVACQVSGHNVHWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...GTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCCCCATGGTGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: VGHEEVEGAQNAVHAPHGAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...ACCATGGGGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp AGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCCTaGGGCTCCACAGGGTACAACCTGGGGCTCGTAACC +
Preference number: 3 (lower is better)
Translates to: RDVHSWSSGPLA*GSTGYNLGLVT
Trigger: GGTTACGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp AGGTGCCCGCCGGCTCATTCTCATACACGCTTGTGCTaGACTGGGGCTTGGAGAACTGTGGCCGGCAGTCAT +
Preference number: 3 (lower is better)
Translates to: RCPPAHSHTRLC*TGAWRTVAGSH
Trigger: ATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp CAATGTCCACCACGAAGTAGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGC +
Preference number: 3 (lower is better)
Translates to: QCPPRSSRGCRP*RGRRCAECRPC
Trigger: GCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCCCAAAAGTTCCATGGG +
Preference number: 3 (lower is better)
Translates to: GWQPAGIGHHQA*QLLAHAQKFHG
Trigger: CCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA +
Preference number: 3 (lower is better)
Translates to: VDPPASETGAAG*RKTVAQAVWDT
Trigger: TGTGTCCCAGACTGCTTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp GATGAAGTAGTACACGATCGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCACGTTGCCCACGAGGGT +
Preference number: 3 (lower is better)
Translates to: DEVVHDRVGALI*IHCACHVAHEG
Trigger: ACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACGCGATCGTGTACTACTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTS*SVRSATRSRVG
Trigger: CCCAACCCTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGTTCCATGGGTGCGCGT +
Preference number: 3 (lower is better)
Translates to: SPQVSVIIRLDS*WLTPKSSMGAR
Trigger: ACGCGCACCCATGGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CACCACGGTCAGACTGAACTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTC +
Preference number: 3 (lower is better)
Translates to: HHGQTELLVGLQ*PLCGHQARVHV
Trigger: GACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATaGAAGTTCTTCTCTTCGTTGCCGGCTGCGATGAAG +
Preference number: 3 (lower is better)
Translates to: SRSTSRHPSGCR*KFFSSLPAAMK
Trigger: CTTCATCGCAGCCGGCAACGAAGAGAAGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp CCTGCAGTGTACTCAGCCTTGGTGAAGCGTGGTGGCTaGTCGTTGATGTCCTCTAGCACAACGCGCACCTCC +
Preference number: 3 (lower is better)
Translates to: PAVYSALVKRGG*SLMSSSTTRTS
Trigger: GGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGATCTGAGCAGCTGATGCGGAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GQMLNERLAKVGSEQLMRRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...CCGCATCAGCTGCTCAGATCCCACTTTTGCCAGACGCTCATTCAGCATCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATGGGGTTGTTGTCATaGATGTCCACGATTTCCAGG +
Preference number: 3 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLMGLLS*MSTISR
Trigger: CCTGGAAATCGTGGACATCAATGACAACAACCCCAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGTCAGTGGCCATCATGGTGATGACCGAGGTGCCCGCCGGCTCATTCTCATACGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: WSVAIMVMTEVPAGSFSYATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...GTATGAGAATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCACAAAGACAGGGCGGTaGTCATTGACGTCGATGACC +
Preference number: 3 (lower is better)
Translates to: PQVILQDHLQQRALDWPLTKTGR*SLTSMT
Trigger: GGTCATCGACGTCAATGACAACCGCCCTGTCTTTGT...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp ATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCTCGTTAATGACGATCACTGGGGGCTGCCTTTaGGAGGCCTCACGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: MNSSSKPRTRSGISLMTITGGCL*EASRKG
Trigger: CCCTTTTCGTGAGGCCTCCAAAAGGCAGCCCCCAGT...GATCGTCATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCTTGTTCATTGACATaGACTTTCTTGTCCACGTGG +
Preference number: 3 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPACSLT*TFLSTW
Trigger: CCACGTGGACAAGAAAGTCAATGTCAATGAACAAGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR-3UTR CAA 90 bp AGCACTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTGGCTACATCCAGCCCATTAAGGCCCTaGTCAGGGTCCACGGCTGCC +
Preference number: 3 (lower is better)
Translates to: STWITTCTEFSRRLLATSSPLRP*SGSTAA
Trigger: GGCAGCCGTGGACCCTGACAAGGGCCTTAATGGGCT...GGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGSPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp AATGGCCCCAGTGATGTTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGTCACCCGTGGTGGGGTaGATGGCAAACTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: NGPSDVGEQVDELLLEAASPVVG*MANLLS
Trigger: AGAGAGCAAGTTTGCCATCAACCCCACCACGGGTGA...CGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAACATCACTGGGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCAGCTGCGATTGCTGGAGGCCTTGACGATGAAGGAGAAGATGGCTTCTCGCTCGCTACATCCCCAGGGTaGTCTTTGGCCAAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: PAAIAGGLDDEGEDGFSLATSPG*SLAKAV
Trigger: GACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGC...GAGCGAGAAGCCATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCAGGATGAATTTTCGCGACGGTaGCTGGCTACATCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: TVGDLVNDDLDALVVPQDEFSRR*LATSPG
Trigger: CCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTC...ATCCTGAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AGCCCGCAGGTATCGGTCATCATCAGGCTTGACAGCTGCTGGCTCACGCCCAAATTCACCCGGCCCTTCTaGTCCACATGGAACTGCACA +
Preference number: 3 (lower is better)
Translates to: SPQVSVIIRLDSCWLTPKFTRPF*STWNCT
Trigger: TGTGCAGTTCCATGTGGACAAGAAGGGCCGGGTGAA...TTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCAAAGGAGTACTTGTaGGTGTTAGGCATGTCCATG +
Preference number: 3 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSKEYL*VLGMSM
Trigger: CATGGACATGCCTAACACCAACAAGTACTCCTTTGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGATCCAGCCACACAGGGTaGGCTCCATCAAAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGSSHTG*APSKEY
Trigger: GTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGA...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp TCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTTCCTCTCTGCAGACCC +
Preference number: 3 (lower is better)
Translates to: SLHAQASALSQR*SSEEHLPLCRP
Trigger: GGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCATGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp GTCCACATGGAAGGCCTCCACGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATTGGGACCTTCATCCTG +
Preference number: 3 (lower is better)
Translates to: VHMEGLHARALK*VGQLSIGTFIL
Trigger: CAGGATGAAGGTCCCAATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGCGTGGAGGCCTTCCATGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTTGAGAGGGCCCAGCCAGTGCTCTCCAGGTGGCCCTaGTCATCTGTACCCTCTGGTCATGTGTTATCTGCT +
Preference number: 3 (lower is better)
Translates to: LERAQPVLSRWP*SSVPSGHVLSA
Trigger: AGCAGATAACACATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACTGGCTGGGCCCTCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp GATGTAGATGCCGATGATGGCCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAATGTCCACCACGAAGTA +
Preference number: 3 (lower is better)
Translates to: DVDADDGRVVVA*QVSGHNVHHEV
Trigger: TACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACGACACGGCCATCATCGGCATCTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp TCGGACCTCAGTTTCCCACCTGTCGTGGGAGCAAGTTaGACTGCATGGGGAAGCAGTCACAGGAATCCCCAC +
Preference number: 3 (lower is better)
Translates to: SDLSFPPVVGAS*TAWGSSHRNPH
Trigger: GTGGGGATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGACAGGTGGGAAACTGAGGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp GGCCAGGAGTCAGGAGACCTGCTTCTGACCTTCACTTaGCCATTGGCTCACAATGTGGCCTTGGCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GQESGDLLLTFT*PLAHNVALAFP
Trigger: TGGGAAGGCCAAGGCCACATTGTGAGCCAATGGCCAAGTGAAGGTCAGAAGCAGGTCTCCTGACTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CCCGCCGGCTCATTCTCATACACGCTTGTGCTGAACTaGGGCTTGGAGAACTGTGGCCGGCAGTCATTGACA +
Preference number: 3 (lower is better)
Translates to: PAGSFSYTLVLN*GLENCGRQSLT
Trigger: TGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAGAATGAGCCGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp GATCTCCTCTCTGATGTGGAGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCGGTTGTCATTGACGTC +
Preference number: 3 (lower is better)
Translates to: DLLSDVEDGAVG*AHKDRAVVIDV
Trigger: GACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAGAGAGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCGCCCAGATTCCCTGTTaGGCTCAGCCTCCGAGTCGG +
Preference number: 3 (lower is better)
Translates to: LLDERLLVKRCALVVIWAAQIPC*AQPPSR
Trigger: CCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGC...GGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 3 (lower is better)
Translates to: GPGPAAPADTHRAADGSSSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTCGTCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTGGCACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LLAPRPAQSVSAQRWRSGTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...GCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGACGAGGAGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp GGGGGTCTCCATGATCACGTCGCGAAGTTTGTGCAGGGGTGTGGATTTGGCGGAACGAAAAGGGGTTCGTaGTCATCGATGTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GGLHDHVAKFVQGCGFGGTKRGS*SSMSSR
Trigger: CCTGGAGGACATCGATGACAACGAACCCCTTTTCGT...TCCGCCAAATCCACACCCCTGCACAAACTTCGCGACGTGATCATGGAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAACAAGTGGAAGCCCATTaGGAGTGGAGAGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKQVEAH*EWRAQG
Trigger: CCCCTGAGCTCTCCACTCCAAATGGGCTTCCACTTG...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp GGGGCCTTACCTCCCTCTAGAATGAACCTTGGTAGATaGTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: GALPPSRMNLGR*SPSLQPTGSGG
Trigger: ACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR CCA 72 bp AGTGCTCTCCAGGTGGCCCTGCTCATCTGTACCCTCTaGTCATGTGTTATCTGCTGGCCAGGATCTGTGAGC +
Preference number: 3 (lower is better)
Translates to: SALQVALLICTL*SCVICWPGSVS
Trigger: GCTCACAGATCCTGGCCAGCAGATAACACATGACCAGAGGGTACAGATGAGCAGGGCCACCTGGAGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp GGATCACCACCTGCACTGAATTTTCGCGACGGTTGCTaGCTACATCCCCAGGGTTGTCTTTGGCCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GSPPALNFRDGC*LHPQGCLWPRQ
Trigger: CTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp ACGTCCAGGATGCGGTTGGTATCGCGGTTCACCACGTaGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGG +
Preference number: 3 (lower is better)
Translates to: TSRMRLVSRFTT*ISSSVCAKFTR
Trigger: CCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGCATCCTGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp ACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTACTGCTAGGGACCCTGTCCAAGCAGGCTCTATaGGAGAAGCCCACTGTCCCT +
Preference number: 3 (lower is better)
Translates to: TRGPPVCSFGIRLLLGTLSKQAL*EKPTVP
Trigger: AGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGGA...CAGGGTCCCTAGCAGTAATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCAGGTAGGTCGCTGGCATaGTCAATCACTGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAGRSLA*SITERV
Trigger: CACTCTCTCAGTGATTGACAATGCCAGCGACCTACC...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TGGTCGTTGATGTCCTCTAGCACAACGCGCACCTCCTGCAGTGTGAGGTCAGCATGGGGCGTATTGTCATaGACGTCCAGGACGTTGACA +
Preference number: 3 (lower is better)
Translates to: WSLMSSSTTRTSCSVRSAWGVLS*TSRTLT
Trigger: TGTCAACGTCCTGGACGTCAATGACAATACGCCCCA...TGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAACGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GCAATGTTGTCATACTCCTGGATGGCAGCCCGCAGGTATCGGTCATCATCAGGCATGGCCCCAGTGATGTaGGAGAGCAGGTGGATGAAC +
Preference number: 3 (lower is better)
Translates to: AMLSYSWMAARRYRSSSGMAPVM*ESRWMN
Trigger: GTTCATCCACCTGCTCTCCAACATCACTGGGGCCAT...GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp CTTGGATCACCACCTGCACTGAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGTTGTCTTTGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: LGSPPALNFRDG*WLHPQGCLWPR
Trigger: CCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GTATCGCGGTTCACCACGTGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCCTTCTTGTCCACATGG +
Preference number: 3 (lower is better)
Translates to: VSRFTTWISSSV*AKFTRPFLSTW
Trigger: CCATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp GGAGTGGCAGGAGGAGGCTTTTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCGCAGGTAATCCTCCAG +
Preference number: 3 (lower is better)
Translates to: GVAGGGFLHHPL*KELFEPQVILQ
Trigger: CTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp AGCTCAGAGATGGAGGAGTGGCAGGAGGAGGCTTTTTaGACCATCCGCTGTGCAAAGAGCTTTTTGAGCCGC +
Preference number: 3 (lower is better)
Translates to: SSEMEEWQEEAF*TIRCAKSFLSR
Trigger: GCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 72 bp TTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATaGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCT +
Preference number: 3 (lower is better)
Translates to: LLMTRQSSPTPG*ASQNPKPLTSP
Trigger: AGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTTGACGGGTCATCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp TGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTaGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: CRPPRCCLMKDF*SRDVHSWSSGP
Trigger: AGGCCCAGATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp CGCGACGGTTGCTGGCTACATCCCCAGGGTTGTCTTTaGCCAAGGCAGTCAGGATATAGTGGTCCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RDGCWLHPQGCL*PRQSGYSGPSS
Trigger: AGAAGAAGGACCACTATATCCTGACTGCCTTGGCCAAAGACAACCCTGGGGATGTAGCCAGCAACCGTCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp ATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTaGATGGCAGCCCGCAGGTATCGGTCATCATCAGGC +
Preference number: 3 (lower is better)
Translates to: MIWPSLAMLSYS*MAARRYRSSSG
Trigger: GCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CCA 72 bp AGCAGCGAGCCCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATG +
Preference number: 3 (lower is better)
Translates to: SSEPLIGPSRMI*PSLAMLSYSWM
Trigger: CATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR CCA 72 bp TCCAGCTCAGTCTGTATCAGCTCAGAGATGGAGGAGTaGCAGGAGGAGGCTTTTTGCACCATCCGCTGTGCA +
Preference number: 3 (lower is better)
Translates to: SSSVCISSEMEE*QEEAFCTIRCA
Trigger: TGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGCCACTCCTCCATCTCTGAGCTGATACAGACTGAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR-3UTR CAA 90 bp TGTCCACAAACATGCCCCCACATCCCCCTAGGTCTACCTGTAGATCCTCCTGCTCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: CPQTCPHIPLGLPVDPPAPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...AGCAGGAGGATCTACAGGTAGACCTAGGGGGATGTGGGGGCATGTTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp TGGAACTGCACATTGTCAGTATTGACAATGGCCCCAGTGATGTTGGAGAGCAGGGCAGTGTACTCAGCCTaGGTGAAGCGTGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: WNCTLSVLTMAPVMLESRAVYSA*VKRGGW
Trigger: CCAGCCACCACGCTTCACCAAGGCTGAGTACACTGC...CCTGCTCTCCAACATCACTGGGGCCATTGTCAATACTGACAATGTGCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp TCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGAATaGACCTTGGTAGATGCTCCCCGTCCCTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: SLGIMGPYLPLE*TLVDAPRPCNQ
Trigger: TTGGTTGCAGGGACGGGGAGCATCTACCAAGGTTCATTCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 72 bp ACAGGTGGGAATTCTCAACAGGTCCCCAAGGAAGGATaGGGCCACATTCCTCCAAGTCACTGCTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: TGGNSQQVPKEG*GHIPPSHCSVT
Trigger: GGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATCCTTCCTTGGGGACCTGTTGAGAATTCCCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299366.11
3UTR TCA 72 bp CCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATaGGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PHFDSPVLCTEV*GFCVQSEAWPS
Trigger: GCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGAGTCAAAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTaGCCTCTCCTCACAACGCGAGGGTTAAACACTTTG +
Preference number: 3 (lower is better)
Translates to: PPQDGLLRIPNP*PLLTTRGLNTL
Trigger: CAAAGTGTTTAACCCTCGCGTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp GTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTaGTCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: VSLPYTRCPGSS*SAFELLSCCCC
Trigger: GCAACAGCAACAAGACAGAAGCTCAAAGGCAGATCAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR TCA 72 bp CGACAAGGACCGTCTGCTGCACTGCGTCTAATGGGATaGTCTTCAGTGGGAAAGGAAATGCCCTGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: RQGPSAALRLMG*SSVGKEMPCQV
Trigger: CACCTGACAGGGCATTTCCTTTCCCACTGAAGATCATCCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CTGGTAGGTCGCTGGCATTGTCAATCACTGAGAGAGTaGCCTCATAGGTGGCAACCAGCTCCCGATTCATGG +
Preference number: 3 (lower is better)
Translates to: LVGRWHCQSLRE*PHRWQPAPDSW
Trigger: CCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTCTCAGTGATTGACAATGCCAGCGACCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp TGTTCATTGACATTGACTTTCTTGTCCACGTGGGGATaGCACCTCCACCTGGACGTCCAGCAGAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: CSLTLTFLSTWG*HLHLDVQQRGM
Trigger: CATCCCTCTCTGCTGGACGTCCAGGTGGAGGTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR GCA 72 bp GAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTaGTTGATGAAAGACTTCTGGTCAAGAGATGTGCAC +
Preference number: 3 (lower is better)
Translates to: EEHLPLCRPPRC*LMKDFWSRDVH
Trigger: GTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR GCA 72 bp CGTTGGCAAGGGCCCGGAAGTAGTGGATGGCCAGAATaGTGTAGAAGACAAGGCTGTTGTTGCCAATGTCTG +
Preference number: 3 (lower is better)
Translates to: RWQGPGSSGWPE*CRRQGCCCQCL
Trigger: CAGACATTGGCAACAACAGCCTTGTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AGATCTTATGAAGGTAGAGGTCAGATGCTGAATGAGCGTCTGGCAAAAGTGGGAAGGGCCAAGCCAAGGTaGTCCCCAAGGCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: RSYEGRGQMLNERLAKVGRAKPR*SPRPGL
Trigger: AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCT...TCCCACTTTTGCCAGACGCTCATTCAGCATCTGACCTCTACCTTCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CCGGTCCAGAGAAGACAGCACATAGATGTCACCCGTGGTGGGGTTGATGGCAAATTGACGTCCAGGACGTaGACAGTCAGCTTGGCATTT +
Preference number: 3 (lower is better)
Translates to: PVQRRQHIDVTRGGVDGKLTSRT*TVSLAF
Trigger: AAATGCCAAGCTGACTGTCAACGTCCTGGACGTCAA...TTTGCCATCAACCCCACCACGGGTGACATCTATGTGCTGTCTTCTCTGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GTGGATAAGCAGTTCTGTCTGCGCAAAGTTCACCCGGCCCTTCTTGTCCACATGGTGATCCCAAAGGGCTaGAACTGGGGCGTATTGTCA +
Preference number: 3 (lower is better)
Translates to: VDKQFCLRKVHPALLVHMVIPKG*NWGVLS
Trigger: TGACAATACGCCCCAGTTCAAGCCCTTTGGGATCAC...CATGTGGACAAGAAGGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp GCTTCCTCTTGTGTACAGTCCTGTAGTACCAGTTCATaGGGACAAAGAGCATGGCGGCCAGGAACAGGAGGA +
Preference number: 3 (lower is better)
Translates to: ASSCVQSCSTSS*GQRAWRPGTGG
Trigger: TCCTCCTGTTCCTGGCCGCCATGCTCTTTGTCCTCATGAACTGGTACTACAGGACTGTACACAAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR TCA 72 bp AGGCTTTTTGCACCATCCGCTGTGCAAAGAGCTTTTTaGGCCGCAGGTAATCCTCCAGGACCACCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: RLFAPSAVQRAF*AAGNPPGPPSA
Trigger: TGCTGAAGGTGGTCCTGGAGGATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642965.1
3UTR GCA 72 bp TGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAATaGTCAGCCTACACCGGGGCCAAGACACTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: CQMAKVPFSQVK*SAYTGAKTLSW
Trigger: CCAGGACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp TCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTaGTGCTTGATGAAAGACTTCTGGTCAAGAGATGTG +
Preference number: 3 (lower is better)
Translates to: SEEHLPLCRPPR*CLMKDFWSRDV
Trigger: CACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp AGGACCCAACTAAACACACCCGTGGGCCCCCAGTTTGCAGCTTTGGTATTAGATTCCTCCCTAAGGGTTTaGTTCCTTCCTCCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: RTQLNTPVGPQFAALVLDSSLRV*FLPPFL
Trigger: CAGGAAGGGAGGAAGGAACAAAACCCTTAGGGAGGA...ATCTAATACCAAAGCTGCAAACTGGGGGCCCACGGGTGTGTTTAGTTGGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CCGAGGACAACCGCAGCCACTGTGACTACATGGAATCTACCAAGATGTAATGGGCCCAGCATGGAGAAGTaGCCAAATGGCAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: PRTTAATVTTWNLPRCNGPSMEK*PNGKGS
Trigger: GGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGG...CCCATTACATCTTGGTAGATTCCATGTAGTCACAGTGGCTGCGGTTGTCCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTTCCGTAGCTGCTCCTaGTTCTCATCGATCATCTGG +
Preference number: 3 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLFRSCS*FSSIIW
Trigger: CCAGATGATCGATGAGAACAAGGAGCAGCTACGGAA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp TCTGCCTTTGAGCTTCTGTCTTGTTGCTGTTGCAGGAGCCATGAGCACAGAGGGTCAATCAGGAAGGGATaGAAGATGATCGAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: SAFELLSCCCCRSHEHRGSIRKG*KMIEEA
Trigger: AGCCTCCTCGATCATCTTCAATCCCTTCCTGATTGA...CCCTCTGTGCTCATGGCTCCTGCAACAGCAACAAGACAGAAGCTCAAAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp CGACAGAAGGGATCCAGCCACACAGGGTTGGCTCCATCAAAGGAGTACTTGTTGTCAATGAGTGCAAAGTaGCCTGAGTCAGCATCAGTG +
Preference number: 3 (lower is better)
Translates to: RQKGSSHTGLAPSKEYLLSMSAK*PESASV
Trigger: CACTGATGCTGACTCAGGCAACTTTGCACTCATTGA...CAACAAGTACTCCTTTGATGGAGCCAACCCTGTGTGGCTGGATCCCTTCTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp GATTGGCCCCTCACGAATGATCTGGCCCAGCTTGGCAATGTTGTCATACTCCTGCCATCAAAGGAGTACTaGTTGGTGTTAGGCATGTCC +
Preference number: 3 (lower is better)
Translates to: DWPLTNDLAQLGNVVILLPSKEY*LVLGMS
Trigger: GGACATGCCTAACACCAACAAGTACTCCTTTGATGG...CAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR GCA 72 bp AAACTGAAAGACCTGTCACCCACTAACTGTGGCTTATaGTTCACACACACCCACTCTGTGAAGCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: KLKDLSPTNCGL*FTHTHSVKPSC
Trigger: GCAGGAGGGCTTCACAGAGTGGGTGTGTGTGAAGCATAAGCCACAGTTAGTGGGTGACAGGTCTTTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR GCA 72 bp GATGTGGCCATGATGCTGTCCAGTTTAACAGTGCCTTaGCCCCATCCACATTCCCTAGGTAAGTCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: DVAMMLSSLTVP*PHPHSLGKSSL
Trigger: TAGGGAAGACTTACCTAGGGAATGTGGATGGGGGCAAGGCACTGTTAAACTGGACAGCATCATGGCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GGCAGCTGCGGCCTCTTACCATCCATAACTCGTTCCTaGCCACAGAGCAAGTTATTGACAGAGTTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: GSCGLLPSITRS*PQSKLLTELVL
Trigger: TAAGACCAACTCTGTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAGCTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CCA 72 bp GTCTGTATCAGCTTGATTGGCCCCTCACGAATGATCTaGCCCAGCTTGGCAATGTTGTCATACTCCTGGATG +
Preference number: 3 (lower is better)
Translates to: VCISLIGPSRMI*PSLAMLSYSWM
Trigger: CATCCAGGAGTATGACAACATTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAATCAAGCTGATACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647092.1
3UTR TCA 72 bp GAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTaGAATGCTCAGCCTACACCGGGGCCAAGACACTGT +
Preference number: 3 (lower is better)
Translates to: EVAKWQRFPLVK*NAQPTPGPRHC
Trigger: ACAGTGTCTTGGCCCCGGTGTAGGCTGAGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CAAACTTGCTCTCTCCATCTCCAAGGCTGTACTCAATaGGTGCAAAGTTGCCTGAGTCAGCATCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: QTCSLHLQGCTQ*VQSCLSQHQWQ
Trigger: CTGCCACTGATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTGGAGATGGAGAGAGCAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp CTGCGGCCTCTTACCATCCATAACTCGTTCCTGGCCACAGAGCAAGTTATTGACCAGCATGGGTCCTTTTaGTCTATGTCTTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: LRPLTIHNSFLATEQVIDQHGSF*SMSSLS
Trigger: GGAAAGAGAAGACATAGACAAAAAGGACCCATGCTG...GTCAATAACTTGCTCTGTGGCCAGGAACGAGTTATGGATGGTAAGAGGCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp CCTAACACCACACTTGGCCATCTCAAGGACATTTTATaGCAAAGAGGAGAGTGCTGTGCACACAGAAGGAGC +
Preference number: 3 (lower is better)
Translates to: PNTTLGHLKDIL*QRGECCAHRRS
Trigger: GCTCCTTCTGTGTGCACAGCACTCTCCTCTTTGTCATAAAATGTCCTTGAGATGGCCAAGTGTGGTGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398809.9
ENST00000616684.4
3UTR TCA 72 bp ATCTCCAAGGCTGTACTCAATGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGTGACTGTCAGGATGAT +
Preference number: 3 (lower is better)
Translates to: ISKAVLNECKVA*VSISGSDCQDD
Trigger: ATCATCCTGACAGTCACTGCCACTGATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR-3UTR CAA 90 bp AAACCGGAGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGATTGACATTGACTTTCTaGTCCACGTGGGGATGCCAC +
Preference number: 3 (lower is better)
Translates to: KPEGTSVTSVYKLGTHLGLTLTF*STWGCH
Trigger: GTGGCATCCCCACGTGGACAAGAAAGTCAATGTCAA...TCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCTCCGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR TCA 72 bp TGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTaGTCTCAAAAAGTGAGTCCGGCTTCACAAGAAACT +
Preference number: 3 (lower is better)
Translates to: WRSPLSLPSKSI*SQKVSPASQET
Trigger: AGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACAGTGGGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CCA 72 bp CTGCTCATCTGTACCCTCTGGTCATGTGTTATCTGCTaGCCAGGATCTGTGAGCATTTTTATTACAACCCCA +
Preference number: 3 (lower is better)
Translates to: LLICTLWSCVIC*PGSVSIFITTP
Trigger: TGGGGTTGTAATAAAAATGCTCACAGATCCTGGCCAGCAGATAACACATGACCAGAGGGTACAGATGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR TCA 72 bp TGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTaGGTCCGGCTTCACAAGAAACTTACCAAGAGGACC +
Preference number: 3 (lower is better)
Translates to: CPFLPSQSDLKK*VRLHKKLTKRT
Trigger: GGTCCTCTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTGGAAGGAAGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR-3UTR CAA 90 bp AGGGAACATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTGGGAAGCCAGTGAGAATGCTTGTTCATaGACATTGACTTTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: REHQSLLFISWAHIWEASENACS*TLTFLS
Trigger: GGACAAGAAAGTCAATGTCAATGAACAAGCATTCTC...ACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATGTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CCA 72 bp CATCAGTCACTTCTGTTTATAAGCTGGGCACACATTTaGGAAGCCAGTGAAATGGAGAGAATGCTTGTTCAT +
Preference number: 3 (lower is better)
Translates to: HQSLLFISWAHI*EASEMERMLVH
Trigger: ATGAACAAGCATTCTCTCCATTTCACTGGCTTCCCAAATGTGTGCCCAGCTTATAAACAGAAGTGACTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCACAGCTTCCGCCATaGCCGGCCCACCGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAQLPP*PAHRPS
Trigger: CGAGGGACGGTGGGCCGGCCATGGCGGAAGCTGTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACGCAGGGCTCACGAGTaGATGCCCCACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPRRAHE*MPHHPG
Trigger: CCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACGGTCCAGCATGGCGTaGGTGGTGCGGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRSSMA*VVRILP
Trigger: GGGCAAGATCCGCACCACCCACGCCATGCTGGACCG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGTGCTGGCCCAGTGCTaGGGCAAAACCTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPVLAQC*GKTSGL
Trigger: GAGCCCCGAGGTTTTGCCCCAGCACTGGGCCAGCAC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGAGGGAGGACCTGGGCTaGCCAGCTCCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLREDLG*PAPVPV
Trigger: GACTGGGACAGGAGCTGGGCAGCCCAGGTCCTCCCT...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
3UTR CAA 72 bp GTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTaGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VRPAGDVRAGPP*RLLSRRGWCLR
Trigger: CCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCTGTCTGCTGTTCATaGCGCTCTGCAAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPVCCS*RSASRP
Trigger: CGGCCGGCTTGCAGAGCGTCATGAACAGCAGACAGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCCAAGCATCGCGCCTaGAGCCCGCGTCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAKHRA*SPRPSL
Trigger: GAGAGAGGGACGCGGGCTGCAGGCGCGATGCTTGGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGGCCAGGGCGGGTGCTaGAAGATGCTGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPGQGGC*KMLWPS
Trigger: TGAAGGCCACAGCATCTTGCAGCACCCGCCCTGGCC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGTCTCTCTGTCCAGTaGCTGCCGGAGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLGLSVQ*LPEPHH
Trigger: GTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACC...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATTCTCCCCGCTACTCTaGAAGGCCCTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPFSPLL*KALLGG
Trigger: CCCACCCAGAAGGGCCTTTCAGAGTAGCGGGGAGAA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAATCCCACCACAAAGCTaGCCCACCCCCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPIPPQS*PTPILL
Trigger: CAGCAGGATGGGGGTGGGGCAGCTTTGTGGTGGGAT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAACCGGTGCTGCAGGCTaGAGGAAGACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPTGAAG*RKTVAQ
Trigger: TTGGGCCACTGTCTTCCTGCAGCCTGCAGCACCGGT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGGTGGAGTCCACCTTaGGGCCGCCGTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRWSPP*GRRHLP
Trigger: TGGCAGATGACGGCGGCCCCAAGGTGGACTCCACCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGGGGATGTCCGCGCTaGGCCTCCCTTGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRGCPR*ASLAPA
Trigger: AGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACTGGTTTGCTTCCCCTaGGGCCTCCCTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPLVCFP*GLPANP
Trigger: AGGATTTGCAGGGAGGCCCCAGGGGAAGCAAACCAG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCAAGGAGTGAGCTCTaGCTTGCCACTCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPRSEL*LATPQL
Trigger: GAGCTGGGGAGTGGCAAGCCAGAGCTCACTCCTTGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCACTCGTGGTCATCTaGGCCTTTGGCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPALVVI*AFGLRL
Trigger: GAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCGAGTCGGAGGTaGAGTCAAACCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPPSRR*SQTGGC
Trigger: ACAGCCCCCGGTTTGACTTCACCTCCGACTCGGCGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCCCGTTGGGTCCTaGGTCTCGGTCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPLPVGS*VSVMGQ
Trigger: CTGGCCCATGACCGAGACTCAGGACCCAACGGGCAG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAAGCCTTCCCAAGGAGTaGGCTCTGGCTTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSLPKE*ALACHS
Trigger: GGAGTGACAAGCCAGAGCTCACTCCTTGGGAAGGCT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCCCCATGGCTCCGTGTaGGTGTGTGCAGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPPHGSV*VCAAAP
Trigger: CGGCGCCGCTGCACACACGCACACGGAGCCATGGGG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGCCTCCCTTGCGCCTaGTTAGCCGGAGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGLPCA*LAGGDG
Trigger: ACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTACTCTGAGCCCACCTTaGCGTCGGTGGCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLTLSPP*RRWPPL
Trigger: CAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGTTGCGCCTGCTCCCTaGGCAAAGGAGCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLVAPAP*AKEPFL
Trigger: AAGAAAGGGCTCCTTTGCCCAGGGAGCAGGCGCAAC...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCCAAGACACTGTCCTaGCATCTGTGCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPAKTLS*HLCWPS
Trigger: ACTGGGCCAGCACAGATGCCAGGACAGTGTCTTGGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAAGAGATGTGCACTCGTaGTCATCTGGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRDVHS*SSGPLA
Trigger: GGCCAAAGGCCCAGATGACCACGAGTGCACATCTCT...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGGCTCTGGAAGCGCCTaGGCTCCTTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPGSGSA*APCASP
Trigger: GGGAGAGGCGCAAGGAGCCCAGGCGCTTCCAGAGCC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGTCGTGGGAGCAAGTTaGACTGCATGGGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPVVGAS*TAWGSS
Trigger: ACTGCTTCCCCATGCAGTCCAACTTGCTCCCACGAC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATaGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPPPGPDAGRGA*PASHASVPPKP
Trigger: GGGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGGTCAGCACTCCGCTaGTGTAGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPRSALR*CSPGQR
Trigger: TCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCT...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACGTTCTCGTACAGGCTaGTGTTGTACAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPRSRTG*CCTVAG
Trigger: GCCAGCCACTGTACAACATCAGCCTGTACGAGAACG...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGGTGGGCCGTGCTGTTaGGCAGCCCGATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHGGPCC*AARCPQ
Trigger: CTGAGGACATCGGGCTGCTCAACAGCACGGCCCACC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCTGTTGCAGGAGCCATaGGCACAGAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCLLQEP*AQRAPA
Trigger: GGCTGGGGCCCTCTGTGCTCATGGCTCCTGCAACAG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGTGGGCGTGCCTaGATCACTGGCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGLGGRA*ITGHHP
Trigger: CGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCTGCGCCCGACAGGATaGGGTAGTTCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPLRPTG*GSSPGH
Trigger: GTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCCGAGAGAGGAACGGTaGCCCGGTCGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAPREER*PGRWPP
Trigger: TGGTGGCCACCGACCGGGGCACCGTTCCTCTCTCGG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTGCGCCTGTCACGTTaGCCACGAGGGTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLRLSR*PRGCRV
Trigger: CACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTGACCGGCCCTGTCCCTaGCCTTGCTCCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPDRPCP*PCSLGG
Trigger: CCCTCCCAGGGAGCAAGGGCAGGGACAGGGCCGGTC...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCAGCTGATGCGGGCTaGCAGGGCCAAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPAADAG*QGQAKV
Trigger: AACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSASRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACCTTGCGCCTCTCCCTaGACAGCTTCCGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSPCASP*TASAMA
Trigger: GGCCATGGCGGAAGCTGTGCAGGGAGAGGCGCAAGG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCAGCGCCTGGGCTCCTTaGGCCTCTCCCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSAWAP*ASPCTA
Trigger: AGCTGTGCAGGGAGAGGCGCAAGGAGCCCAGGCGCT...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAACATGGCGCCCCATaGCTCCGTGTGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQHGAP*LRVRVC
Trigger: GCACACACGCACACGGAGCCATGGGGCGCCATGTTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCATATTCCCTGAAACGATaGTGTAGCCAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPYSLKR*CSQCPG
Trigger: CCCGGGGCATTGGCTACACCATCGTTTCAGGGAATA...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCACGTAGTCCAGTGGGATaGCCACCCGAATACGAATGT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPRSPVG*PPEYEC
Trigger: ACATTCGTATTCGGGTGGCCATCCCACTGGACTACG...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCCTCATCGAGGTCGATaGCCACCACTTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPPHRGR*PPLGRW
Trigger: CCATCTACCAAGTGGTGGCCATCGACCTCGATGAGG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGTGGCCGACAGGGTTaGGGTGCCCTCGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLGGRQG*GALVLH
Trigger: GTGGAGGACGAGGGCACCCCAACCCTGTCGGCCACC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCAGCAGCTCCAGGATaGGTGGCGAGAATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAAAPG*VARMPP
Trigger: GGGAGGCATTCTCGCCACCCATCCTGGAGCTGCTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCAGTGGCCGCTGTGTaGTCACCAAGCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLAVAAV*SPSPSP
Trigger: TGGACTCGGGCTTGGTGACCACACAGCGGCCACTGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACAACCAGGTCGAGGGTTaGGGAGGGTCCACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHNQVEG*GGSTGR
Trigger: CCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCTTGAGCTCCACTaGTGGCTTGTGGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPLELH*WLVAEA
Trigger: CGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
3UTR CAA 72 bp TGGATCCCATCGGGCCCCTTGAGCTCCACTGGTGGCTaGTGGCGGAAGCGCAGGCTACCCTGCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WIPSGPLSSTGG*WRKRRLPCPGL
Trigger: CAGCCCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCCCTGAGCGGGCATTaGTCCGAAACTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPLSGH*SETGWS
Trigger: GCTCCACCCAGTTTCGGATCAATGCCCGCTCAGGGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGCCACTGCGCGAACGATaGGGATGTATTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLPLRER*GCIQTW
Trigger: CCAAGTCTGAATACATCCTCATCGTTCGCGCAGTGG...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCACCTCCTGCAGTGTaGGGTCAGCAACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAPPAV*GQQPGR
Trigger: TCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCGTCTCCCCAAGGAGTaGGCTCTGGCTTGCCACTCC +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCRLPKE*ALACHS
Trigger: GGAGTGGCAAGCCAGAGCTCACTCCTTGGGGAGACG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGCCCTTTCCCAAAGATaGTCCTCAGAAGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPALSQR*SSEEHL
Trigger: AAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGGC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCCACCTGCCCATTGCTaGCAGCATCAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHPPAHC*QHQGPR
Trigger: CCTGGGACCCTGATGCTGGCAGCAATGGGCAGGTGG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCGGTAGGTCATCCTCATaGTCCGCCTGGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSGRSSS*SAWAAS
Trigger: GCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACC...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGGACGGTGGATGGGTaGTGCTCACACCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGTVDG*CSHPQG
Trigger: GCCTTGTGGGTGTGAGCAGCACCCATCCACCGTCCC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTAGCCGGAGGGGATGGTaGTTGCGGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPSRRGW*LRGGAG
Trigger: CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGGCGCTGGGCCTCCCTTaGGCCTGCTTAGCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWALGLP*ACLAGG
Trigger: CCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGC...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCGCAGGGCTCACGAGTaGATGCCCCACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLRRAHE*MPHHPG
Trigger: CCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRWTRAAAGLTSACPTTLFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...CAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTGAAGGGCGGGGCCTaGTCAGTGGCCGACACATTC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLKGGA*SVADTF
Trigger: GAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCGGTCCACCAGGCCCTaGACTGTGATCACACCCGTG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGRSTRP*TVITPV
Trigger: CACGGGTGTGATCACAGTCCAGGGCCTGGTGGACCG...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGGTCCTTCTTCCGTaGAGGGGTGCCTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVVLLP*RGASVR
Trigger: TCTGACCGAGGCACCCCTCCACGGAAGAAGGACCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGCAAAGGCGTCCTCCTaGTTGGGCACCAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSAKASS*LGTRRS
Trigger: TGATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGTGTGGTCCCAGGGGTaGCCCCCTCCAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGVWSQG*PPPGSA
Trigger: AGCGGATCCTGGAGGGGGCCACCCCTGGGACCACAC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: APVTLPTRVPRGECSGTVQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...GACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGATGGTGCCGTTGGGTaGGCGCACAAAGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHDGAVG*AHKDRA
Trigger: CGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAAAGGCTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGAGGATGGTGCCGTTaGGTGGGCGCACAAAGACAG +
Preference number: 4 (lower is better)
Translates to: QRLGHGLGPGPTGQEGWWGGWCR*VGAQRQ
Trigger: CTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCC...CCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCTCGTATGGCACTGGCTaGCCCAGGTCGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGSYGTG*PRSLAT
Trigger: GGTGGCCAGCGACCTGGGCCAGCCAGTGCCATACGA...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTTCCATGGGTGCGCGTaGGGCTGTTCCACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHFHGCA*GCSTGR
Trigger: CCGACCTGTGGAACAGCCCCACGCGCACCCATGGAA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGAGGGGACGGTGGATaGGTGCTGCTCACACCCACA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGGDGG*VLLTPT
Trigger: TGTGGGTGTGAGCAGCACCCATCCACCGTCCCCTCC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACGGGGCTCTCTTCCTTaGGTTTCCCGGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSRGSLP*VSRVLP
Trigger: TGGCAGCACCCGGGAAACCCAAGGAAGAGAGCCCCG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGGCTCTGGAAGCGCCTaGGCTCCTTGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLGSGSA*APCASP
Trigger: GGGAGAGGCGCAAGGAGCCCAGGCGCTTCCAGAGCC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CCGGCCCACCGTCCCTCGACAGCCCCTGCCGGGCCCCGAGGACAACCGCAGCCAGCAAGTTGGACTGCATaGGGAAGCAGTCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: PAHRPSTAPAGPRGQPQPASWTA*GSSHRN
Trigger: ATTCCTGTGACTGCTTCCCCATGCAGTCCAACTTGC...TGGCTGCGGTTGTCCTCGGGGCCCGGCAGGGGCTGTCGAGGGACGGTGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442677.4
3UTR CAA 72 bp TTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTaGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LGPSSASTAPVT*PTRVPRGECSG
Trigger: GCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp GTGCTGCCGTGCACCACATGGATCCCATCGGGCCCCTaGAGCTCCACTGGTGGCTTGTGGCGGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPCTTWIPSGP*SSTGGLWRKRR
Trigger: CCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp TGCAGGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTaGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CRGVDLADSVRA*RSKAVASAAVS
Trigger: GCTGACCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCATGCCCAGGCCGGGCTaGCTAGCCCCGACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASMPRPG*LAPTTS
Trigger: TGAGGTGGTCGGGGCTAGTCAGCCCGGCCTGGGCAT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGAGCCAGTCGCTCCCGGATCACTGTaGCGATACCGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DAPRPCNQQVQEVPREPVAPGSL*RYRGRC
Trigger: ACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGC...GACTGGCTCCCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCAGCACATGGATGGTaGGCGTGCTGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPAHGW*ACWWSS
Trigger: AGAGCTCCACCAGCACGCTCACCATCCATGTGCTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGCGATCTCACCGCTaGTGCGGTCCATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPWRSHR*CGPCGR
Trigger: CCTTCCGCATGGACCGCATCAGCGGTGAGATCGCCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGGCTGGCCCTCAGTaGCTTCAAATGGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPAGPQ*LQMVPH
Trigger: ATGAGGGACCATTTGAAGTCACTGAGGGCCAGCCGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGTCAATGATGACACCTaGCCTCACGGTCACCACACC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWVNDDT*PHGHHT
Trigger: GGTGTGGTGACCGTGAGGTCAGGTGTCATCATTGAC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCATGAGGAAGCGGTCCTaGGCCCCAGCTTCTATTCGG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSMRKRS*APASIR
Trigger: CCGAATAGAAGCTGGGGCTCAGGACCGCTTCCTCAT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCGGGGCGGGAGTCATTaGTGTCATCGATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWRGGSH*CHRSEW
Trigger: CCATTCTGATCGATGACATCAATGACTCCCGCCCCG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCTGTCCGGTTGGCAATaGCCTTCCCTGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRLSGWQ*PSLPRS
Trigger: ACTCCTCGGCAGGGAAGGTCATTGCCAACCGGACAG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGGGGACCCGTTGTCTaGGGCCCTCACGGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRGPVV*GPHGKV
Trigger: AACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGREGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGATGTAGATGCCGATaGTGGCCGTGTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGCRCR*WPCRCG
Trigger: GCCACAACGACACGGCCATCATCGGCATCTACATCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGCCACGATTCCCAGCTaGGCCAGCCACAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREATIPS*ASHNGL
Trigger: AAGGCCATTGTGGCTGGCTCAGCTGGGAATCGTGGC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTCATCATCAGGCTTaGCAGCTGCTGGCTCACGCC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGHHQA*QLLAHA
Trigger: GGCGTGAGCCAGCAGCTGTCAAGCCTGATGATGACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSLAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCTGGGCCTTTGGCCTaGGGCTCCACAGGGTACAAC +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSGPLA*GSTGYN
Trigger: GTTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCATGCTGTCTTAACCTGTaGTGTGGCCATGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPCCLNL*CGHDAV
Trigger: GACAGCATCATGGCCACATCACAGGTTAAGACAGCA...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp ACCTTGGTAGATGCTCCCCGTCCCTGCAACCAACAGGTTCAGGAGGTCCCCAGGGGCTCATCCGCGGCGTaGCGGCAGCTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLVDAPRPCNQQVQEVPRGSSAA*RQLLGL
Trigger: GAGACCCAGGAGCTGCCGGCACGCCGCGGATGAGCC...CCTGGGGACCTCCTGAACCTGTTGGTTGCAGGGACGGGGAGCATCTACCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAGTGTCAGGCTCCACTaGAAAGAAGCGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSVRLH*KEARGL
Trigger: GAGGCCTCTCGCTTCTTTGCAGTGGAGCCTGACACT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCAGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCGCTGCCAAAGGCAGATaGACTGACAATGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: DPSRRRAHECMPHHPGSPAAKGR*TDNAVG
Trigger: ACCTACAGCATTGTCAGTGCATCTGCCTTTGGCAGC...GGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATGCTGTACTCCACCTaGCCGTTGGGTCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWMLYST*PLGPES
Trigger: AGACTCAGGACCCAACGGGCAGGTGGAGTACAGCAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGCAATGACCTTCCCTaGCGAGGAGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGNDLP*RGVLQL
Trigger: CAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGTCCAGGTCCCGCAGCACCAGCAGACACCCATCGGGCTGCAGATGGAAGTTCTGACAGGGATCTCAGCTaGCCGGGGCGGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGPAAPADTHRAADGSSDRDLS*PGRGPV
Trigger: AACGGGTCCCCGCCCCGGGCAGCTGAGATCCCTGTC...AGAACTTCCATCTGCAGCCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TTGGAGAGCAGGTGGATGAACTCCTCCTCGAAGCCGCGCACACGGTCGGGGATCAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LESRWMNSSSKPRTRSGIRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...GATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCGTTGCCCACGAGGGTaGCGCGTGGTGAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRCPRG*RVVSAQ
Trigger: CTGAGCACTCACCACGCGGCACCCTCGTGGGCAACG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTCATCTGCATCCACTaGGCCTGTCACGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLICIH*ACHVAH
Trigger: GTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGTTGGGGCCCTCATCTaGATCCACTGCGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGVGALI*IHCACH
Trigger: GTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAAC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGTCGGTGGCCACCCCTaGAGTGTACTCAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREVGGHP*SVLSLG
Trigger: ACCAAGGCTGAGTACACTGCAGGGGTGGCCACCGAC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCGAAGGTGCGCAGAATaGCGTCCATGCTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHRRCAE*RPCSPW
Trigger: CCATGGGGAGCATGGACGGCATTCTGCGCACCTTCG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGTGCCCGTGCTGCCGTaGACCACATGGATCCCATCG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLVPVLP*TTWIPS
Trigger: CGATGGGATCCATGTGGTGCACGGCAGCACGGGCAC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTGCAGCGTGCCCGTGCTaGCGTGCACCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGAACPC*RAPHGS
Trigger: GGATCCATGTGGTGCACGGCAGCACGGGCACGCTGC...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCGGTGGCCAGCAGCGTaGCCGTGCTGCCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPRWPAA*PCCRAP
Trigger: TGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGGCTGCATTCAGTCTaGAAAGGCTGGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRLHSV*KGWATA
Trigger: GGCCGTGGCCCAGCCTTTGCAGACTGAATGCAGCCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAAGTCTTCCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPSLPAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGGAAGACT...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCCTGGTGGAACAGATaGCTGGGTGCCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSWWNR*LGASWE
Trigger: CTCCCAGCTGGCACCCAGGCATCTGTTCCACCAGGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGCTGGTAGGCCTGTGTaGTCTCGTAGTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHAGRPV*SRSPAP
Trigger: GGGAGCTGGACTACGAGACCACACAGGCCTACCAGC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCATGTCCGCCTTCCCCTaGACGGAGGTCGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RCREGSIASLPRFCPSQAMSAFP*TEVGEM
Trigger: CATCTCCCCGACCTCCGTCCAGGGGAAGGCGGACAT...GGCTTGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCGGCCGGGAAGAAGGTaGGCGTCTCGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRRPGRR*ASRRSH
Trigger: ATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGGGTGTTGAGCGTGTCTaGGCCCTCATCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGREGVERV*ALIQQH
Trigger: GTGCTGCTGGATGAGGGCCCAGACACGCTCAACACC...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCCAGGTCCAGTGCCTaGATGGTGATGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSRSSA*MVMRLV
Trigger: CACCAGCCTCATCACCATCCAGGCACTGGACCTGGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGTAGAGGTGAGGCGGTaGGATAAGATGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPVEVRR*DKMGHW
Trigger: CCAGTGCCCCATCTTATCCCACCGCCTCACCTCTAC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCAGCTGGACATACCCTaGGGGCACCAGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPQLDIP*GHQVQQ
Trigger: CTGCTGGACCTGGTGCCCCCAGGGTATGTCCAGCTG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCTCGTAGGACTGCAGTaGCCGCTGTGTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLLVGLQ*PLCGHQ
Trigger: TTGGTGACCACACAGCGGCCACTGCAGTCCTACGAG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGGTGGTGCCCCAGAGTaGGGGCTCTCCACCATCTGT +
Preference number: 4 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGGGAPE*GLSTIC
Trigger: ACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAGACCTCGTACACGTTaGAGCGCAGCGGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRPRTR*SAAGSP
Trigger: AGGAGATCCCGCTGCGCTCCAACGTGTACGAGGTCT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCAGTCTCGTATGGCACTaGCTGGCCCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSSLVWH*LAQVAG
Trigger: GCCAGCGACCTGGGCCAGCCAGTGCCATACGAGACT...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGAGTACACGATCGCGTTaGGGCCCTCATCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSTRSR*GPHLHP
Trigger: TGGATGCAGATGAGGGCCCCAACGCGATCGTGTACT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGTGCTCAGGCACTGTCAGCAGCCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: VTLPTRVPRGECSGTVSSPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCACCCTCGTGGGCAACGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRESRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCGTCCAGGATGCGGTTaGTATCGCGGTTCACCACGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLRPGCG*YRGSPR
Trigger: ACGTGGTGAACCGCGATACCAACCGCATCCTGGACG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CGTTGGGGCCCTCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCGCAGCCGGACAGAGATaGCAGGCTGCACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RWGPHLHPLRLSRCPRGCAAGQR*QAARPG
Trigger: TCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGC...GCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTAGGCTTGACAGCTGCTaGCTCACGCCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCRLDSC*LTPKSS
Trigger: GGAACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCT...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCAGCGAGCCCTTGATTaGCCCCTCACGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWQRALD*PLTNDL
Trigger: CAGATCATTCGTGAGGGGCCAATCAAGGGCTCGCTG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224721.12
ENST00000398788.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCCACTGGTGGCTTGTaGCGGAAGCGCAGGCTACCC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSTGGL*RKRRLP
Trigger: GGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRELELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCTGCCGTGCACCACATaGATCCCATCGGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLLPCTT*IPSGPL
Trigger: CAAGGGGCCCGATGGGATCCATGTGGTGCACGGCAG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCGCAGGTAATCCTCCAGGACCACCTTCAGCAGCGAGCCCTTGATTGGCCCCTCCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQVILQDHLQQRALDWPLRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...GAGGGGCCAATCAAGGGCTCGCTGCTGAAGGTGGTCCTGGAGGATTACCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR CCA 90 bp CCTGGATCAACTCTGAGCCCACCTTGGCGTCGGTGGCCACCCCTGCAGTGTACTCGGCCCAGGCCCTTCTaGTCTTCCTCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSTLSPPWRRWPPLQCTRPRPF*SSSGRL
Trigger: CAGCCTGCCCGAGGAAGACCAGAAGGGCCTGGGCCG...AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGCAGGGGTGTGGATTTaGCGGATTCTGTGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRAGVWI*RILCGR
Trigger: ACGCCCGCACAGAATCCGCCAAATCCACACCCCTGC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCAGTGTGAGGTCAGCAACCAGGTCGAGGGTTGGGGAGGGTCCACGGGGAGGTCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: CSVRSATRSRVGEGPRGGPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...ACCTCCCCGTGGACCCTCCCCAACCCTCGACCTGGTTGCTGACCTCACACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGCCTGCCCTTGCTCCCTaGGAGGGGACGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGPALAP*EGTVDG
Trigger: CCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGG...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGGAGGTGATGCCACCTaGACTCGGAGGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPGGDAT*TRRRTA
Trigger: AGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACTCCAAGCATGGTCTTaGCAGCCGTCTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSLQAWS*QPSWWP
Trigger: GGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGCTCCACGGTGAACTCTaGCTTGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGLHGEL*LGLSVQ
Trigger: CTGGACAGAGAGACCAAGTCAGAGTTCACCGTGGAG...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGTCCACCACCTGGATaGAGAGTGGAAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSCPPPG*RVEGQS
Trigger: GCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTCACATCCAGGACAGTaGCGAACACGGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGSHPGQ*RTRWLC
Trigger: GCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGGGGGCCTCATCGTTaGTGTCCTCCACGTACACAA +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERGPHR*CPPRTQ
Trigger: TTGTGTACGTGGAGGACATCAACGATGAGGCCCCCG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTGTAGCGGCCGTGGCTaGTCTCGTAGTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRCSGRG*SRSPAL
Trigger: AAGAGCTGGACTACGAGATCAGCCACGGCCGCTACA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGGGCCGGTTCACAGTaGCGATCCCTGTCGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGAGSQ*RSLSWH
Trigger: ATGCCACGACAGGGATCGTCACTGTGAACCGGCCCC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGGCATTTGGCACACTaGCAGAGCGCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSWHLAH*QSALVG
Trigger: ACCTACCAGAGCGCTCTGTCAGTGTGCCAAATGCCA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGGCTGCCACAGCAATaGGTGTGGTCCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRLPQQ*VWSQGW
Trigger: CCACCCCTGGGACCACACTCATTGCTGTGGCAGCCG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGAGTGCAAAGTTGCCTaGGTCAGCATCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWECKVA*VSISGS
Trigger: ACTGCCACTGATGCTGACTCAGGCAACTTTGCACTC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CTGGGCCACGGCCTTGGCCCAGGCCCCACAGGACAGGAAGGGTGGTGGGGGTGTGATCACCACCTGCACTaGATTTTCGCGACGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LGHGLGPGPTGQEGWWGCDHHLH*IFATVA
Trigger: AGCAACCGTCGCGAAAATTCAGTGCAGGTGGTGATC...ACACCCCCACCACCCTTCCTGTCCTGTGGGGCCTGGGCCAAGGCCGTGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGTGGCCGGCAGTCATTaGCATCCAGCACTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLVAGSH*HPALGS
Trigger: TGATCCAAGTGCTGGATGTCAATGACTGCCGGCCAC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCGCCAGGGCCCTCAAGTaGGTAGGTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPARALK*VGQLSI
Trigger: AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGC...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCGGGATCTCCTCTCTaGTGTGGAGGATGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAGSPL*CGGWCR
Trigger: ACGGCACCATCCTCCACATCAGAGAGGAGATCCCGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CTGCAGTGGCCGCTGTGTGGTCACCAAGCCCGAGTCCATGTCCACATGGAAGGCGAGGGTGCCGCGTGGTaGGTGCTCAGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LQWPLCGHQARVHVHMEGEGAAW*VLRHCQ
Trigger: CTGACAGTGCCTGAGCACTCACCACGCGGCACCCTC...GCCTTCCATGTGGACATGGACTCGGGCTTGGTGACCACACAGCGGCCACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGAGGGAGCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: LRLLSRRGWCLRGGAGRERCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...CTCCCTCCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCGGGGCTGTAGGCCATaGAGAGGTCGAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQRGCRP*RGRRCA
Trigger: TGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGGAGAGCAGGTGGATaGACTCCTCCTCGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAWRAGG*TPPRSR
Trigger: GCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCCA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACTGGGCCTGCCAGCCATaGGGAAGAGAGAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHWACQP*GREKRV
Trigger: AACCCTCTTCTCTCTTCCTCATGGCTGGCAGGCCCA...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCATGCCCTGGGTCCAGCTaGTCTGCCTTTGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSCPGSS*SAFELL
Trigger: CAGAAGCTCAAAGGCAGATCAGCTGGACCCAGGGCA...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAACGTCCAGAGGCTCTaGCACCCCGCGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWNVQRL*HPALHA
Trigger: GGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCTCCGTGTGCGTGTGTaGAGCGGCGCCGCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLELRVRV*SGAAPR
Trigger: GCGAGGCGCGGCGCCGCTGCACACACGCACACGGAG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGAGGAGTAGAGGACGCTaGCCCCTGCCCCCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWRSRGR*PLPPSR
Trigger: CCGACTTGGGGGCAGGGGGCAGCGTCCTCTACTCCT...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCGATGGTGTAGCCAATaGCCCGGGGACGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSRWCSQ*PGDVLY
Trigger: ATAAAGGACGTCCCCGGGGCATTGGCTACACCATCG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTGCTGTACACCAGGGTaGCATTCTCCCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPCCTPG*HSPPGL
Trigger: CAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp ATGCGGACAGGCCACCGCCCTCTTGTCTGCATGGCAGATGGGCACAGGGTGGAAAGACCCCCGCCGGGATaGCTTCAAGCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: MRTGHRPLVCMADGHRVERPPPG*LQAPRP
Trigger: TGGCCGAGGTGCTTGAAGGCATCCCGGCGGGGGTCT...TTCCACCCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTGGCCTGTCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCTGGTACTCCGCGATaGGCTCGCGGTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAAGTPR*ARGPAR
Trigger: CCGAGCTGGACCGCGAGCGCATCGCGGAGTACCAGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGAACACGGTGGCTGTaGCCGTGTGTCGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRTRWL*PCVASL
Trigger: TAGGGAAGCGACACACGGGCACAGCCACCGTGTTCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GAGGGTGGGGAGCTGGAGGTCAGTGCCCTGTCTACAGGGGGCAGCGGCTGCTCACGCTGGCCTCATAGCTaGTCTGCAGAAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: EGGELEVSALSTGGSGCSRWPHS*SAERWA
Trigger: GGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCG...TGAGCAGCCGCTGCCCCCTGTAGACAGGGCACTGACCTCCAGCTCCCCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCAGACGGCTGTACTGCTaGTGTGTGAACACGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARRLYC*CVNTGA
Trigger: GGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCTCAAACTTCCCCTCTaGGCCCGACAGGATGCGGTA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRLKLPL*ARQDAV
Trigger: TACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGAGGCATTGGAGAACTaGACGGCCTCGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLEALEN*TASSSS
Trigger: CGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTC...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGAGGCCCCCGCGATGTTaGCAGAGGCCAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRRPPRC*QRPGRR
Trigger: TCTTCTCCCTGGCCTCTGGCAACATCGCGGGGGCCT...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTCCAGGATGGTCACCTaGAGGATGTGGTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWSRMVT*RMWSFF
Trigger: GAAGAAGGACCACATCCTGCAGGTGACCATCCTGGA...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCAGGGTCCACGGCTaGCACAGCAATGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRVRVHG*HSNECG
Trigger: ACCACACTCATTGCTGTGGCAGCCGTGGACCCTGAC...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CTGATGTGGAGGATGGTGCCGTTGGGTGGGCGCACAAAGACAGGGCGGTTGTCAAGGCTGTACACCGCCTaGGACTCGCGGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LMWRMVPLGGRTKTGRLSRLYTA*DSRSRR
Trigger: GCGCCTGGACCGCGAGTCGCAGGCGGTGTACAGCCT...TGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTCCACATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ACAGATCCCTGGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCTCCAGGGCCACCTaGAGCGGCTGCATAGTCTCG +
Preference number: 4 (lower is better)
Translates to: TDPWAASSSSSSSSSYSRSSRAT*SGCIVS
Trigger: CGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGA...GCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCCCAGGGATCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGTGCCGCGTGGTGAGTaGTCAGGCACTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEQLMRAARAKPRLSPRPVPRGE*SGTVSS
Trigger: GCTGCTGACAGTGCCTGAGCACTCACCACGCGGCAC...AGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCGTTGTTGCCAATGTCTaGATCCAGGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSVVANV*IQGQHL
Trigger: CAGGTGCTGGCCCTGGATGCAGACATTGGCAACAAC...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGTGTCGTTGTGGCCTaGCAGGTCTCGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRVVVA*QVSGHN
Trigger: ATTGTGGCCCGAGACCTGGCAGGCCACAACGACACG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGATAAGCAGTTCTGTCTaGGCAAAGTTCACCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWISSSV*AKFTRP
Trigger: GGGCCGGGTGAACTTTGCGCAGACAGAACTGCTTAT...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCGGTCCACGTCCAGGATaGGGTTGGTATCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGGPRPG*GWYRGS
Trigger: TGAACCGCGATACCAACCGCATCCTGGACGTGGACC...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCAGCAGCGTGCCCGTaGTGCCGTGCACCACATGGA +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPAACP*CRAPHG
Trigger: TCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCACGGTGGATGGGTGCTaGTCACACCCACAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGTVDGC*SHPQGF
Trigger: GAAGCCTTGTGGGTGTGAGCAGCACCCATCCACCGT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCCGAAGCTCCTTGCATaGCCAGGCCAGCGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLPKLLA*PGQRPF
Trigger: GAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTTCGG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGGGCTCACGAGTGCATaGCCCACCACCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAGLTSA*PTTLGA
Trigger: GGCTCCCAGGGTGGTGGGGCATGCACTCGTGAGCCC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCAGGGACCCTGGCAGCTaGGGCCTCTTACCATCCATA +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCRDPGS*GLLPSI
Trigger: TATGGATGGTAAGAGGCCGCAGCTGCCAGGGTCCCT...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCGCGGGTGCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPAGAAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGCACCCGC...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466757.8
CDS-3UTR CCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCACGTGGCAGCTGGTaGCAACATGGCGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGPRGSW*QHGAPW
Trigger: CCATGGGGCGCCATGTTGCCACCAGCTGCCACGTGG...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCAAAAGCCAGGCCACGTaGCAGCTGGTGGCAACATGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGKSQAT*QLVATW
Trigger: CCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTT...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGTCAGGATGAAGCCATaGCTGTACAGGGGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGVRMKP*LYRGFS
Trigger: GGAGAACCCCCTGTACAGCCATGGCTTCATCCTGAC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCCCAGTTTTCTGGTTGTaGCCCACACCCCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCPVFWL*PTPPST
Trigger: AGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGG...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCGATGCCAGTTTTCTaGTTGTGGCCCACACCCCCG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPAMPVF*LWPTPP
Trigger: CGGGGGTGTGGGCCACAACCAGAAAACTGGCATCGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCTGTGGCACTGCTGGTaGCTTTCAGAGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLLWHCW*LSEGAC
Trigger: GCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCCACCACCCGCAGCTaGTACTCCGCGATGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAATTRS*YSAMRS
Trigger: CGAGCGCATCGCGGAGTACCAGCTGCGGGTGGTGGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGGTGGAGCTCTTGGTaGGCGTGCCTGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSAWWSSW*ACLHHW
Trigger: CCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCTCATCTGCGTCCGTaGCTTTCAGCTGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSPHLRP*LSAARC
Trigger: GCATCTTGCAGCTGAAAGCCACGGACGCAGATGAGG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCTCTGTCCAGGGGCCTaGCCACAAACACTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHLCPGA*PQTLRQ
Trigger: TTGGCGAAGTGTTTGTGGCCAGGCCCCTGGACAGAG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCGATGTCACGGTCAGTaGCTCTCACCTGGACCACAG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRRCHGQ*LSPGPQ
Trigger: CTGTGGTCCAGGTGAGAGCCACTGACCGTGACATCG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTGGTCACGGGCACAGATaGTCAGGTTGTAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLGHGHR*SGCRRR
Trigger: TCGCCTTCTACAACCTGACCATCTGTGCCCGTGACC...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTCACTGGCCAGGACATaGGCGACAAAGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSSLART*ATKLET
Trigger: TGTCTCCAGCTTTGTCGCCCATGTCCTGGCCAGTGA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCACTGTCAGCGTCACTaGCCAGGACATGGGCGACAA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHHCQRH*PGHGRQ
Trigger: TTGTCGCCCATGTCCTGGCCAGTGACGCTGACAGTG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTCCTCCTGGCTATGCGTaGATTCTCCGGGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLPPGYA*ILRVVL
Trigger: AAGGACAACCCGGAGAATCCACGCATAGCCAGGAGG...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPREESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCTGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: VVACQVSGHNVHHEVAGAEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...AGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGGAGGAGTCCTCCAGCTaGACATACCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEEESSS*TYPGGT
Trigger: GGTGCCCCCAGGGTATGTCCAGCTGGAGGACTCCTC...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGGGGCTTGGAGAACTGTaGCCGGCAGTCATTGACATC +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGGLGEL*PAVIDI
Trigger: GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCC...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGTTGTGGCCTGCCAGGTCTCGGGCCACAATGTCCACCACGAAGTAGCCGGGGCGAGTCCATGTCCACATaGAAGGCCTCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RCGLPGLGPQCPPRSSRGESMST*KASTPG
Trigger: CCCTGGCGTGGAGGCCTTCCATGTGGACATGGACTC...GCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCACAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp AAGGCAGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCATCTCCTCTCTGATGTaGAGGATGGTGCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KAVASAAVSVSSERPRPFISSLM*RMVPLG
Trigger: ACCCAACGGCACCATCCTCCACATCAGAGAGGAGAT...GAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACTGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCTCATCCTTGTCCGTaGCGTAGACCTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPHPCP*RRPRTR
Trigger: ACGTGTACGAGGTCTACGCCACGGACAAGGATGAGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CGGCGATCTCACTCAGGTTCTCCGGTAGGTCATCCTCATGCTCCGCCTGGGCGGCCACCTTGGCGTCGGTaGCCACCCCTGCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: RRSHSGSPVGHPHAPPGRPPWRR*PPLQCT
Trigger: AGTACACTGCAGGGGTGGCCACCGACGCCAAGGTGG...CCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTCCAGGGCCAGCACCTaGATCAACTCTGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLSRAST*INSEPT
Trigger: GGTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCCCATGGTGAAGACCTaGCCCACATCTTCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPPMVKT*PTSSES
Trigger: CGACTCTGAAGATGTGGGCCAGGTCTTCACCATGGG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GTTGGCAATGACCTTCCCTGCCGAGGAGTCCTCCAGCTGGACATACCCTGGGGGATGGCCGTGTCGTTGTaGCCTGCCAGGTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: VGNDLPCRGVLQLDIPWGMAVSL*PARSRA
Trigger: GGCCCGAGACCTGGCAGGCCACAACGACACGGCCAT...CCCCCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAGGGAAGGTCATTGCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTCGCCCAAAAGTTCCATaGGTGCGCGTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPRPKVP*VRVGLF
Trigger: GAACAGCCCCACGCGCACCCATGGAACTTTTGGGCG...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCCCTGCCCTGGGCTGTaGTCTCCTGGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FGLFQLSLSQAGPQTLGPPCPGL*SPGSSS
Trigger: GGACGAGGAGCCAGGAGACCACAGCCCAGGGCAGGG...GGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCCGGGGCTGTAGGCCATGAAGAGGTCGAAGGTGCGCAGAATGCCGTCCATGCTCAGGCTACCCTGCCCTaGGCTGTGGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGAVGHEEVEGAQNAVHAQATLP*AVVSWL
Trigger: GAGCCAGGAGACCACAGCCCAGGGCAGGGTAGCCTG...AGCATGGACGGCATTCTGCGCACCTTCGACCTCTTCATGGCCTACAGCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCTTGAGCTCCACTGGTaGCTTGTGGCGGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSALELHW*LVAEAQ
Trigger: CTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGGTTTGTGCAGGGGTGTaGATTTGGCGGATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWVCAGV*IWRILC
Trigger: GCACAGAATCCGCCAAATCCACACCCCTGCACAAAC...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCCTGGGAGGGGACGGTaGATGGGTGCTGCTCACACC +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWPGRGR*MGAAHT
Trigger: GGTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCAGCCTGAGCCAAGCTaGTCCCCAGACTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQQPEPS*SPDSWA
Trigger: GGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR CCA 90 bp GGATCTGAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCTTAGCCGGAGGGGATaGTGCTTGCGGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSEQLMRAARAKPRLSPRLSRRG*CLRGGA
Trigger: AGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAG...CCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGACTTGGGGCGGGGAGTaGGGCTCAGGGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEETWGGE*GSGLLP
Trigger: AGGGAGGAGCCCTGAGCCCCACTCCCCGCCCCAAGT...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGTCAGTCTGCAAAGGCTaGGCCACGGCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQSVCKG*ATALAQ
Trigger: CTGGGCCAAGGCCGTGGCCCAGCCTTTGCAGACTGA...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
3UTR CAA 72 bp GGGAGGAGGAGCAAACAGGGCTCTCCAAGCATGGTCTaGGCAGCCGTCTTGGTGGCCCCTCTTCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GRRSKQGSPSMV*AAVLVAPLQGT
Trigger: GGTGCCCTGAAGAGGGGCCACCAAGACGGCTGCCAAGACCATGCTTGGAGAGCCCTGTTTGCTCCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTGTACTCGGAGCTGTTaGACTCCGGGGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSCTRSC*TPGHCH
Trigger: ATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGGCCTGTGCCAGCTCAGTaGTGGCCACGCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: ATFLQVTALSPRLGAGSGPVPAQ*WPRCTR
Trigger: CCGAGTACAGCGTGGCCATCACTGAGCTGGCACAGG...CCCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR TCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCTGTACAGTGGCTGGCTaGAGATGGGCCGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCCTVAG*RWAGCH
Trigger: ATGACAACCGGCCCATCTTCAGCCAGCCACTGTACA...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCAGCCCTCGTACAGGCTaGTGTCGAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSPRTG*CRSSCQ
Trigger: TTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCT...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCCAGCATCCATGGCCATaGCCGTCAGATAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPQHPWP*PSDKSA
Trigger: GGCTGATTTATCTGACGGTCATGGCCATGGATGCTG...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCGTGGCTCCTGCCATaGTGTTCTCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPWLLP*CSPPRR
Trigger: TCTCCGTGGTGGAGAACATCATGGCAGGAGCCACGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CCCTCGCCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGGCAGAGACGTGGTGGTaGTTTCCCCTGAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPFSQLPSLPGPLQRQLAETWW*FPLSGH
Trigger: ATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGC...CAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAGAAAGGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GAGCAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCTGCCCGTGGTGCTGTTaGGGCTGTAGAACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EQLMRAARAKPRLSPRPGCPWCC*GCRTCW
Trigger: CCAACAAGTTCTACAGCCTCAACAGCACCACGGGCA...GCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CATCCACATTCCCTAGGTAAGTCTTCCCTATACCCGCTGCCCTGGGTCCAGCTGCCAGCTCGGTGGTGGTaGCCACCACGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPHSLGKSSLYPLPWVQLPARWW*PPRRCC
Trigger: GCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGG...CAGCTGGACCCAGGGCAGCGGGTATAGGGAAGACTTACCTAGGGAATGTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR TCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCGTACACAATCACCCTaGCGGAGCTCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASRTQSP*RSSAWG
Trigger: GCCCCATGCGGAGCTCCGTCAGGGTGATTGTGTACG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTTGTACTGCTGCTGTGTaGACACGGGGGCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLCTAAV*TRGPHR
Trigger: ACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACA...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGTCTCGTCCAGCACAGTaGTGTAGACCTTCACGGTGG +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRSRPAQ*CRPSRW
Trigger: CCACCGTGAAGGTCTACATCACTGTGCTGGACGAGA...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCAGGACAGAACACTGTTaGTCCCGATGTCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPRTEHC*SRCHGQ
Trigger: CTGACCGTGACATCGGGATCAACAGTGTTCTGTCCT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp CAGCTGATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTCGATGCGGAAGGTGTTaGCGATGTTGCCTGCGACGA +
Preference number: 4 (lower is better)
Translates to: QLMRAARAKPRLSPRPGLRCGRC*RCCLRR
Trigger: TCGTCGCAGGCAACATCGTCAACACCTTCCGCATCG...AAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR TCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCACCACGGTCAGACTaGACTTCTCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPPRSD*TSRRTA
Trigger: TGCAGTCCTACGAGAAGTTCAGTCTGACCGTGGTGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCCGTTGCCGGCTGCGATaGAGTAGTACACGATCGCGT +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSARCRLR*SSTRSR
Trigger: ACGCGATCGTGTACTACTTCATCGCAGCCGGCAACG...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTACTCTCGCTCCCTGTCCCCCAGGCGTGGTGGCTGGTCGTTaGTGTCCTCTAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: PPPPPPPPLPTLAPCPPGVVAGR*CPLAQR
Trigger: GCGTTGTGCTAGAGGACATCAACGACCAGCCACCAC...GCCTGGGGGACAGGGAGCGAGAGTAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp GGGGTGTGGATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCACCTGGATCAACTCTaGGCCCACCTTGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GVWIWRILCGRCARRQWPHLDQL*AHLGVG
Trigger: ACCGACGCCAAGGTGGGCTCAGAGTTGATCCAGGTG...AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCAGCCACAATGGCCTTaGGCTTCCTCTTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSQPQWP*ASSCVQ
Trigger: CTGTACACAAGAGGAAGCTCAAGGCCATTGTGGCTG...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTTGGCCCCTCACGAATaGTCTGGCCCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSALAPHE*SGPAWQ
Trigger: TTGCCAAGCTGGGCCAGATCATTCGTGAGGGGCCAA...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR TCA 90 bp TGGACGTCCAGCAGAGAGGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGCCTCGGGCAGGCTGTTaGGGTCGGTGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WTSSREGCGGNVARLGLEPRAGC*GRWPAA
Trigger: CGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGG...CTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCCTCTCTGCTGGACGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR TCA 90 bp CGCACACGGTCGGGGATCTCGTTAATGACGATCTTGACGCGCTGGTCGTCCCTCTGGGATCTGAGCAGCTaGTGCGGGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTRSGISLMTILTRWSSLWDLSS*CGLPGP
Trigger: TGGCCCTGGCAGCCCGCATCAGCTGCTCAGATCCCA...GAGGGACGACCAGCGCGTCAAGATCGTCATTAACGAGATCCCCGACCGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GATGAGGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAACGTCCAGAGGCTCTaGCACCCCGCGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DEATFLQVTALSPRLGAGNVQRL*HPALHA
Trigger: GGCATGGAGCGCGGGGTGGCAGAGCCTCTGGACGTT...CCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGGGCAAAGCCGACCTGTaGCAGCTCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQGKADL*QLSDGH
Trigger: GTGGCCATCACTGAGCTGGCACAGGTCGGCTTTGCC...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGGAGTCTTCATCTGTTaGCCGGAGCCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLGVFIC*PEPHQL
Trigger: CAGCTGGTGCGGCTCCGGGCAACAGATGAAGACTCC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGCCACGTCGTTGTCCGTaGAGTTCAGCCAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQPRRCP*SSARPP
Trigger: GGGTGGTCTGGCTGAACTGCACGGACAACGACGTGG...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GCAGGGGATGTCCGCGCTGGGCCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGCTTTCAGCTGCAAGATaGTGTGGCCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AGDVRAGPPLRLLSRRGWLSAAR*CGLQGC
Trigger: ACATCCCTGAAGGCCACAGCATCTTGCAGCTGAAAG...CCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGGCCCAGCGCGGACATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGAGGGAGAAGACCACCTaGCCATTGCTGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRREKTT*PLLPAS
Trigger: TGATGCTGGCAGCAATGGGCAGGTGGTCTTCTCCCT...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR GCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTAATTTTCGCGACGGTTaGTGGCTACATCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLNFRDG*WLHPQG
Trigger: ACCCTGGGGATGTAGCCAGCAACCGTCGCGAAAATT...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp GGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGTCCCCAGACTCTTGGGCCCCAGACTCCCAGTCCCGGTTaGCCGCAGTCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLFQLSLSQAGPQTLGPQTPSPG*PQSSGS
Trigger: GCTTCCTGAAGACTGCGGGCAACCGGGACTGGGAGT...CTGGGGCCCAAGAGTCTGGGGACCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGCCACCTGCAGCGGCTaGATAGTCTCGTATGGCACT +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPATCSG*IVSYGT
Trigger: AGTGCCATACGAGACTATGCAGCCGCTGCAGGTGGC...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TGCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: CGVELGGRRACLASFSSATTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...GGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GCGGGGTGGAGCTGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTACAACGCGCACCTCCTaGAGTGTGAGGTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: AGWSWEGGGPVWPLSAQPTTRTS*SVRSAT
Trigger: GGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGT...AGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCAGCTCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTGTCCCTGCCCTTGCTCCCTGGGAGGGGACGGTGGATGGGTGCTGCTCACACCAAAAGTTCCATGGGTaGGCGTGGGGCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PVPALAPWEGTVDGCCSHQKFHG*AWGCST
Trigger: TGTGGAACAGCCCCACGCGCACCCATGGAACTTTTG...GTGTGAGCAGCACCCATCCACCGTCCCCTCCCAGGGAGCAAGGGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp CCTCCCTTGCGCCTGCTTAGCCGGAGGGGATGGTGCTTGCGGGGTGGAGCTGGGATCAGGCTTGACAGCTaGTGGCTCACGCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PPLRLLSRRGWCLRGGAGIRLDS*WLTPKS
Trigger: ACTTTTGGGCGTGAGCCAGCAGCTGTCAAGCCTGAT...CCCAGCTCCACCCCGCAAGCACCATCCCCTCCGGCTAAGCAGGCGCAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
CDS-3UTR GCA 90 bp AGTGGCCTCGGCAGCGGTCAGCGTCTCCAGCGAGCGGCCCAGGCCCTTCTGGTCTTGCACCATCCGCTGTaGAAAGAGCTTTTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQRLQRAAQALLVLHHPL*KELFEP
Trigger: CGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAA...GACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642965.1
CDS-3UTR GCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGAAGCGCAGGCTACCCTaGCCTGGGCTGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWKRRLP*PGLWSP
Trigger: AGGAGACCACAGCCCAGGGCAGGGTAGCCTGCGCTT...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224721.12
ENST00000398788.4
ENST00000619887.4
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp TCATCTGCATCCACTGCGCCTGTCACGTTGCCCACGAGGGTGCCGCGTGGTGAGATTCTGTGCGGGCGTTaGGCTCGAAGGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSASTAPVTLPTRVPRGEILCGR*ARRQWP
Trigger: AGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAAT...CTCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGATTTGGCGGATTCTGTaGGGGCGTTGCGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: IWRILCGRCARRQWPRQRIWRIL*GRCARR
Trigger: CCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp ATTTGGCGGATTCTGTGCGGGCGTTGCGCTCGAAGGCAGTGGCCTCGGCAGCGGTGGGGAGAGGGCGGCTaGATTCAGTCTGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: IWRILCGRCARRQWPRQRWGEGG*IQSAKA
Trigger: AGCCTTTGCAGACTGAATGCAGCCGCCCTCTCCCCA...CCGCTGCCGAGGCCACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642965.1
ENST00000647092.1
CDS-3UTR GCA 90 bp GGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCTGCTGTGACCCACAGTaGAGCCAGCCACGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GHFQQLEVMPPGLGGGQLCCDPQ*SQPRLP
Trigger: GGGGAGACGTGGCTGGCTGCACTGTGGGTCACAGCA...GAGCTGTCCTCCTCCGAGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGGCCTTGCCCTCCAGGTaGCAAAGCCCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLALPSR*QSPAWR
Trigger: TCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGC...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp GGGCACAGGGTGGAACAGGAAGAGGGCCTGAGCTTGGGCCCAGCTCCATCACTGCACCGCCCTCTTGTCTaGATGGCAGATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GHRVEQEEGLSLGPAPSLHRPLV*MADGHR
Trigger: CCTGTGCCCATCTGCCATGCAGACAAGAGGGCGGTG...CAGTGATGGAGCTGGGCCCAAGCTCAGGCCCTCTTCCTGTTCCACCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR GCA 90 bp CTCTCAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCTCGACAAGGACCGTCTaGTGCACTGCGTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: LSAPVTPGTLAEATDPLPSTRTV*CTASNG
Trigger: CCCATTAGACGCAGTGCAGCAGACGGTCCTTGTCGA...GGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp CAAGCCGGCCGCGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCAGCTGATTGTGAAATGTaGGCGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: QAGRAGPEPPQGSRVHAPADCEM*ARCHSH
Trigger: ATGTGAATGACAACGCGCCCACATTTCACAATCAGC...TGGGGCATGCACTCGTGAGCCCTGCGGCGGCTCGGGTCCAGCGCGGCCGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WEGGGPVWPLSAQPEPSWRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CCAGCTTGGCTCAGGCTGAGCTGAAAGAGGCCAAACAGGCCCTCCTCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGCCACATTCCTCCAAGTCACTGCTCTGTCACCCAGACTTGGGGCGGGGAGTGGCGCGGGCGCTGTCAATaGCGAAGAATTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GHIPPSHCSVTQTWGGEWRGRCQ*RRIGRG
Trigger: CCCCCTCCCAATTCTTCGCCATTGACAGCGCCCGCG...CCACTCCCCGCCCCAAGTCTGGGTGACAGAGCAGTGACTTGGAGGAATGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CAGCTCCCGTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCATGCGGGTGGACAGAGGCCTaGTCTTGTCTTGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLPSLPGPLQRQLTPSPCGWTEA*SCLDLW
Trigger: CCACAGATCAAGACAAGACCAGGCCTCTGTCCACCC...GCATGGGGAGGGGGTCAGTTGCCTCTGCAAGGGTCCCGGGAGTGACGGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCCCATGTTGTACAGTGGCTaGCTGAAGATGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: GCQGQAKVVPKAWPWRVPMLYSG*LKMGRL
Trigger: CAACCGGCCCATCTTCAGCCAGCCACTGTACAACAT...GGGGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCAGCGGTCCAGGTCTGTaGCATTCAGGAACAGCACCG +
Preference number: 4 (lower is better)
Translates to: AAQLLSQSAGQDPTTKLPSGPGL*HSGTAP
Trigger: CGGTGCTGTTCCTGAATGCCACAGACCTGGACCGCT...GGGCAGCTTTGTGGTGGGATCCTGGCCAGCTGACTGGGACAGGAGCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442677.4
CDS-3UTR CCA 90 bp GAGTGGGGCTCAGGGCTCCTCCCTAGGAATCATGGGGCCTTACCTCCCTCTAGACCAGCATGGCGTGGGTaGTGCGGATCTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EWGSGLLPRNHGALPPSRPAWRG*CGSCPW
Trigger: CCACGGGCAAGATCCGCACCACCCACGCCATGCTGG...TCTAGAGGGAGGTAAGGCCCCATGATTCCTAGGGAGGAGCCCTGAGCCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp AGGTCCCCAGGGAGCCAGTCCAGAGTGATCCAGCTGCAAAGCCCTTGGGAAGAGATCAGCTCGGCCTCATaGGGGTCGGGGTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSPGSQSRVIQLQSPWEEISSAS*GSGFSR
Trigger: CCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGAT...CTCTTCCCAAGGGCTTTGCAGCTGGATCACTCTGGACTGGCTCCCTGGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299366.11
CDS-3UTR CCA 90 bp CGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGGTCCTTCACATCCAGCACATaGATGGTGAGCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAARAKPRLSPRPGLGGSFTSST*MVSVLV
Trigger: CACCAGCACGCTCACCATCCATGTGCTGGATGTGAA...GGACCCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GGGATGTGGCGGAAATGTAGCGAGACTTGGACTGGAGTCGGGTGTCCGGCCAGCCACCCGGAACTCGCGTaGCACGTCCTCGGACACAGA +
Preference number: 4 (lower is better)
Translates to: GMWRKCSETWTGVGCPASHPELA*HVLGHR
Trigger: TCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTG...GCTGGCCGGACACCCGACTCCAGTCCAAGTCTCGCTACATTTCCGCCACATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAAGACAGTGGCCGCATGTAGGCGGCTGTaGTCTCCCGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VDPPASETGAAGCRKTVAACRRL*SPGPGP
Trigger: TGGGCCTGGACCGGGAGACCACAGCCGCCTACATGC...GGCCACTGTCTTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442677.4
ENST00000466757.8
CDS-3UTR CCA 90 bp TGGACTGGAGTCGGGTGTCCGGCCAGCAGGGGATGTCCGCGCTGGGCCTCCCTTTCTCGGTCTGTGGCTTaGACCACGATGACTGACGTT +
Preference number: 4 (lower is better)
Translates to: WTGVGCPASRGCPRWASLSRSVA*TTMTDV
Trigger: AACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGA...AAGGGAGGCCCAGCGCGGACATCCCCTGCTGGCCGGACACCCGACTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp GATGCGGGCTGCCAGGGCCAAGCCAAGGTTGTCCCCAAGGCCTGGCCTTGGAGGCCTCGTATGAGGCATTaGAGAACTGCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: DAGCQGQAKVVPKAWPWRPRMRH*RTARPR
Trigger: ACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGG...CCTCCAAGGCCAGGCCTTGGGGACAACCTTGGCTTGGCCCTGGCAGCCCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224721.12
CDS-3UTR CCA 90 bp TGGGAGGGAGGAGGGCCTGTTTGGCCTCTTTCAGCTCAGCCTGAGCCAAGCTGGCATTGTGGAGCTGAGTaGGGGCATCCCCCGGTCACG