RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH20 (Homo sapiens)

Ensembl gene IDs: ENSG00000101542

Ensembl transcript IDs: ENST00000262717.9, ENST00000536675.2, ENST00000538374.5, ENST00000587582.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTG +
Preference number: 1 (lower is better)
Translates to: ACSPPFSLSSTVLLV*LAAPCPRSTRGERL
Trigger: CAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CCA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTaGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATT +
Preference number: 1 (lower is better)
Translates to: AHPHSHSPAQYCSCG*LHLVREAPAENVWI
Trigger: AATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR GCA 90 bp ACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTaGACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGA +
Preference number: 1 (lower is better)
Translates to: TPILTLQHSIARVVG*TLSAKHPRRTSGFG
Trigger: TCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CCA 90 bp GCCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATaGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGC +
Preference number: 1 (lower is better)
Translates to: ARAFLWWKSDKGLSE*QRKATLVRTPWTPS
Trigger: GCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAACCCGCGGAGAACGTCTaGATTTGGACGCGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: SHSPAQYCSCGWLHLVREPAENV*IWTRAC
Trigger: GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGG...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTaGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCG +
Preference number: 2 (lower is better)
Translates to: ILTLQHSIARVVGCT*SAKHPRRTSGFGRA
Trigger: CGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 90 bp TGCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: CSPPFSLSSTVLLVW*AAPCPRSTRGERLD
Trigger: ATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SHSPAQYCSCGWLHLVREENVWI*TRACLL
Trigger: CAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTC...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCACCCGCGGAGAACGTCTaGATTTGGACGCGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSPAENV*IWTRAC
Trigger: GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGG...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR GCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCAGAGCTCTGTTCGCCTaGTCACCCCCATTCTCACTC +
Preference number: 2 (lower is better)
Translates to: LANGREKPPLSEHLGLQARALFA*SPPFSL
Trigger: GAGTGAGAATGGGGGTGAGCAGGCGAACAGAGCTCT...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSTVLLV*LAAPCP
Trigger: CGGACAAGGTGCAGCCAACCACACGAGCAATACTGT...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 90 bp GGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTaGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: GKVTKALANGREKPP*SEHLGLQAFAHSVR
Trigger: TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 90 bp CCTCCCACCCATCCACCCCCATGCAAGGCTGATTCAGTCTTAACCTaGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAG +
Preference number: 2 (lower is better)
Translates to: PPTHPPPCKADSVLT*SQKGYGKFHPSQNK
Trigger: CTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGAATCAGCCTTGCATGGGGGTGGATGGGTGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
3UTR-3UTR CCA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAAGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKENVWI*TRACLL
Trigger: CAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTC...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp GATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGTATTGCTCGTGTGGTTaGCTGCACCTTGTCCGCGAA +
Preference number: 2 (lower is better)
Translates to: DTRVELSAFNWHLCIQGQYCSCG*LHLVRE
Trigger: TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA...CTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CCA 90 bp CATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGTGCAAAAGAGGCACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: HLISTFGTWKRHLQCKRGTVLLV*LAAPCP
Trigger: CGGACAAGGTGCAGCCAACCACACGAGCAATACTGT...GCCTCTTTTGCACTGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
3UTR-3UTR CCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAACTTGTCAGAACACCTTaGACTCCAAGCCTTCGCACA +
Preference number: 2 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKLVRTP*TPSLRT
Trigger: TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAG...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR GCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAACCCATCCACCCCCATaGAAGGCTGATTCAGTCTTA +
Preference number: 2 (lower is better)
Translates to: LSFVASNLHIWHMEETSTTHPPP*KADSVL
Trigger: TAAGACTGAATCAGCCTTGCATGGGGGTGGATGGGT...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
3UTR-3UTR CCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGCCAGAGCCTTTCTGTaGTGGAAAAGTGACAAAGGC +
Preference number: 2 (lower is better)
Translates to: LSFVASNLHIWHMEETSTARAFL*WKSDKG
Trigger: GCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGGC...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
3UTR CCA 72 bp CCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGA +
Preference number: 3 (lower is better)
Translates to: PPFSLSSTVLLV*LAAPCPRSTRG
Trigger: TCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHGERLD*DARLPP
Trigger: AGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCC...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR GCA 72 bp CTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTaGACCTTGTCCGCGAAGCACCCGCGGAGAACGTCT +
Preference number: 3 (lower is better)
Translates to: LTLQHSIARVVG*TLSAKHPRRTS
Trigger: AGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTGTGGTTGGCTGCACCTaGTCCGCGAAGCACCCGCGG +
Preference number: 3 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLVVGCT*SAKHPR
Trigger: CCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCAC...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR GCA 72 bp CCTGCTCACCCCCATTCTCACTCTCCAGCACAGTATTaGTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCA +
Preference number: 3 (lower is better)
Translates to: PAHPHSHSPAQY*SCGWLHLVREA
Trigger: TGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CCA 72 bp CATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTaGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAAC +
Preference number: 3 (lower is better)
Translates to: HSHSPAQYCSCG*LHLVREAPAEN
Trigger: GTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWGERLD*DARLPP
Trigger: AGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCC...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGA +
Preference number: 3 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSVLLVW*AAPCPR
Trigger: TCGCGGACAAGGTGCAGCCAACCACACGAGCAATAC...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp CATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGTGCAAAAGAGGCGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGA +
Preference number: 3 (lower is better)
Translates to: HLISTFGTWKRHLQCKRGVLLVW*AAPCPR
Trigger: TCGCGGACAAGGTGCAGCCAACCACACGAGCAATAC...GCCTCTTTTGCACTGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
3UTR CCA 72 bp GAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTaGACTCCAAGCCTTCGCACACAGTGTCAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: EWQRKATLVRTP*TPSLRTQCQKN
Trigger: ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR-3UTR CAA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCAGAGAAAAGCCACCCTaGTCAGAACACCTTGGACTC +
Preference number: 3 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGREKPP*SEHLGL
Trigger: GAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCT...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGGGTCTCTTCACCCCTaGTCGCGGCGCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRGSLHP*SRRCPR
Trigger: GCGGGGACAGCGCCGCGAGCAGGGGTGAAGAGACCC...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGCCCCCACTGGGCGGCTaGTGCCCCGCTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPAPPLGG*CPAGSL
Trigger: AAGAGACCCAGCGGGGCACCAGCCGCCCAGTGGGGG...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCCCCGCGGAGAACGTCTaGATTTGGACGCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACPAENV*IWTRAC
Trigger: GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGG...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGGTTCCGAGTCCGACGTaGCCGACTGCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: APCPRSTRGERLDLDARLVPSPT*PTAGSS
Trigger: TGAGCTCCCTGCAGTCGGCCACGTCGGACTCGGAAC...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCACCTTCGGTCCTAACTaGTCCAGGGCGGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACTFGPN*SRAGVL
Trigger: CAGAACGCCCGCCCTGGAGCAGTTAGGACCGAAGGT...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGGCGGTTGCCAGGAGTTaGGGGGTACTGCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: APCPRSTRGERLDLDARLAVARS*GVLPSA
Trigger: TGCACTTGGCAGTACCCCCCAACTCCTGGCAACCGC...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGTCTCGGTCGAGCCTCTaGATGGCGTGGATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: APCPRSTRGERLDLDARLSRSSL*MAWMSP
Trigger: TGGAGACATCCACGCCATTCAGAGGCTCGACCGAGA...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCTCTCGGTCGAGCCTCTaGATGGCGTGGATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACSRSSL*MAWMSP
Trigger: TGGAGACATCCACGCCATTCAGAGGCTCGACCGAGA...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGTGGTCAGTGTGCCTGTaGTGCTCAGCACGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAAPCPRSTRGERLDLDAWSVCL*CSARAA
Trigger: GGCAGCCCGTGCTGAGCAGCACAGGCACACTGACCA...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACTCGGGCAGCATGTCCTaGCGCGTCTTGGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHSGSMS*RVLGAA
Trigger: GGCCGCCCCCAAGACGCGGCAGGACATGCTGCCCGA...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCTCGTGTGGTTGGCTaGACCTTGTCCGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRARVVG*TLSAKH
Trigger: GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGC...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAGCTGCCTCCCCCACTaGGCGGCTGGTGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHSCLPH*AAGAPL
Trigger: CAGCGGGGCACCAGCCGCCCAGTGGGGGAGGCAGCT...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCATGCTGACCATTGCGTaGGTCATCTTGGTCCACCGC +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACMLTIA*VILVHR
Trigger: GCGGTGGACCAAGATGACCCACGCAATGGTCAGCAT...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGGCCTCGTAGAGCTTaGCCAGCACGTAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LAAPCPRSTRGERLDLDARPRRA*PARSCG
Trigger: TCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCG...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGACGCGCGCCTGCCTCCTaGCTTCCGTCACCACAGCGG +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRRAPAS*LPSPQR
Trigger: CCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCG...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCACACTCTGCTCCTGCTaGCGGAAACCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRTLCSC*RKPDLL
Trigger: CAGGAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGT...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGACACTCTGCTCCTGCTaGCGGAAACCAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPATLCSC*RKPDLL
Trigger: CAGGAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGT...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCTCGAACATATACGTCTaGAGGGAGTCGAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACSNIYV*RESKGG
Trigger: ACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGA...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCCGCCTGTCTAGGGCTTaGGCCCTTAGAGTATACTGG +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRRLSRA*ALRVYW
Trigger: CCAGTATACTCTAAGGGCTCAAGCCCTAGACAGGCG...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCAAATATGGCTGGCCCTaGAGAATGCTGTACACCACC +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACKYGWP*RMLYTT
Trigger: GGTGGTGTACAGCATTCTTCAGGGCCAGCCATATTT...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGTCGGGCAGCATGTCCTaGCGCGTCTTGGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWSGSMS*RVLGAA
Trigger: GGCCGCCCCCAAGACGCGGCAGGACATGCTGCCCGA...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCGGAGTCGAAGGGCGGTaGCCACAGGTCCATGTCGGC +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVGVEGR*PQVHVG
Trigger: GCCGACATGGACCTGTGGGCACCGCCCTTCGACTCC...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCCCGGGGGTTCCACATaGCCGCGATGTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVPGGST*PRCRRP
Trigger: AGGCCTTCGACATCGCGGCCATGTGGAACCCCCGGG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCACTGTTGTTGTGTCCTaGAATGGGCCCAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HLVREAPAENVWIWTRACTVVVS*NGPKFR
Trigger: TCTGAACTTGGGCCCATTTCAGGACACAACAACAGT...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCCCCGGCTCAAACTaGCTGGGAGCATGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVRPGSN*LGACRP
Trigger: AGGCCTACATGCTCCCAGTCAGTTTGAGCCGGGGCG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAGGCGAGGATGGCAATaGGGGCGCCCCGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KPPLSEHLGLQAFAHSVRRRGWQ*GRPGSN
Trigger: GTTTGAGCCGGGGCGCCCTCATTGCCATCCTCGCCT...TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCCCACTGGGCGGCTGGTaGCCCGCTGGGTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQAPLGGW*PAGSLH
Trigger: GTGAAGAGACCCAGCGGGGCACCAGCCGCCCAGTGG...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGTAGGTCGGGTCATCTaGATCTGTGGCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRVGRVI*ICGCHL
Trigger: CAAGTGACAGCCACAGATGCAGATGACCCGACCTAC...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCATTTGGACGCGCGCCTaGCTCCTGGCTTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVIWTRA*LLASVT
Trigger: GGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAAT...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGGTGAGAAGAGCCCCCTaGTCGCGGTCACCGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWVRRAP*SRSPSP
Trigger: GGGGGACGGTGACCGCGACCAGGGGGCTCTTCTCAC...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCACAGGGGACATTTCTaGCACAGTGGCCACATAAGG +
Preference number: 4 (lower is better)
Translates to: LAAPCPRSTRGERLDLDAHRGHF*HSGHIR
Trigger: CCTTATGTGGCCACTGTGCCAGAAATGTCCCCTGTG...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGCACAGGGGACATTTCTaGCACAGTGGCCACATAAGG +
Preference number: 4 (lower is better)
Translates to: AQYCSCGWLHLVREAPAEHRGHF*HSGHIR
Trigger: CCTTATGTGGCCACTGTGCCAGAAATGTCCCCTGTG...CTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCATGCTGACCATTGCGTaGGTCATCTTGGTCCACCGC +
Preference number: 4 (lower is better)
Translates to: YCSCGWLHLVREAPAENVMLTIA*VILVHR
Trigger: GCGGTGGACCAAGATGACCCACGCAATGGTCAGCAT...GACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGTCGTCGATGATGTATaGTTGTTTCCGGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPAVVDDV*LFPVPP
Trigger: AGGCGGCACCGGAAACAACCATACATCATCGACGAC...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTGTTCGGCCTGTCCAGTaGGAAGAGCCCCCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLVRPVQ*EEPPGR
Trigger: GCGACCAGGGGGCTCTTCTCACTGGACAGGCCGAAC...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGCCACGTCTTCCACACTaGTGTGCACTGTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPAPRLPH*CALLLC
Trigger: ACACAACAACAGTGCACATCAGTGTGGAAGACGTGG...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTCAGTGTGCCTGTGCTaGTCAGCACGGGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQASVCLC*SARAAR
Trigger: GCGGGCAGCCCGTGCTGAGCAGCACAGGCACACTGA...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCGCTCGTGTGGTTGGCTaGACCTTGTCCGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVARVVG*TLSAKH
Trigger: GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGC...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCGCCCTTAGAGTATACTaGGCTCTTTCCTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: YCSCGWLHLVREAPAENVALRVY*ALSSRS
Trigger: CGACCGAGAGGAAAGAGCCCAGTATACTCTAAGGGC...GACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCTTCATCCAAGTCCTTaGCAAACACTCTCCCGACAG +
Preference number: 4 (lower is better)
Translates to: LAAPCPRSTRGERLDLDALHPSP*QTLSRQ
Trigger: CTGTCGGGAGAGTGTTTGCCAAGGACTTGGATGAAG...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGACGGCCTCGTAGAGCTTaGCCAGCACGTAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRRPRRA*PARSCG
Trigger: TCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCG...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 72 bp CTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTaGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LQHSIARVVGCT*SAKHPRRTSGF
Trigger: AAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 72 bp CCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: PFSLSSTVLLVW*AAPCPRSTRGE
Trigger: TTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACAAACGCATCTCTAGGTaGGGATTGGCTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHKRISR*GLAPST
Trigger: GGTGGAGGGAGCCAATCCTCACCTAGAGATGCGTTT...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGCTGGGCTGCAGGACATaGCGTGGCCGTCGTCATCAC +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWLGCRT*RGRRHH
Trigger: GTGATGACGACGGCCACGTCATGTCCTGCAGCCCAG...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAGGCGAGGATGGCAATaGGGGCGCCCCGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIRRGWQ*GRPGSN
Trigger: GTTTGAGCCGGGGCGCCCTCATTGCCATCCTCGCCT...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCTATGGTTGTTTCCGGTaGCGCCTCATGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRYGCFR*RLMDKM
Trigger: CATTTTGTCCATGAGGCGGCACCGGAAACAACCATA...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACAGAGCTCTGTTCGCCTaGTCACCCCCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHRALFA*SPPFSL
Trigger: GAGTGAGAATGGGGGTGAGCAGGCGAACAGAGCTCT...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCATTGCGTGGGTCATCTTaGTCCACCGCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: HSPAQYCSCGWLHLVREALRGSS*STALTV
Trigger: GACAGTGAGTGCGGTGGACCAAGATGACCCACGCAA...TGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCTGCAGGACATGACGTaGCCGTCGTCATCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVLQDMT*PSSSQL
Trigger: CAGCTGTGATGACGACGGCCACGTCATGTCCTGCAG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGTGGCTGTCACTTGGATaGCGGAGGTACCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWWLSLG*RRYPQG
Trigger: CCCCTGTGGGTACCTCCGTCATCCAAGTGACAGCCA...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCACTGTTGTTGTGTCCTaGAATGGGCCCAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: YCSCGWLHLVREAPAENVTVVVS*NGPKFR
Trigger: TCTGAACTTGGGCCCATTTCAGGACACAACAACAGT...GACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGCCAGTTCTTTGCATTaGTCATTCTACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPAASSLH*SFYQKS
Trigger: GGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGC...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGAGGACAGTGATATTATaGCAAGAAAATTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: APCPRSTRGERLDLDARLRTVIL*QENSSR
Trigger: CCGGGAAGAATTTTCTTGGCATAATATCACTGTCCT...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAGGGCTGCCCGCTATCTaGTATCAGGATAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPGLPAI*YQDRQV
Trigger: CACCTGCCTATCCTGATAGCAGATAGCGGGCAGCCC...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGACGTAGCTGTGGACAGTaGTGTTCACTGCGCACGTCT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRRSCGQ*CSLRTS
Trigger: AGACGTGCGCAGTGAACAGCACTGTCCACAGCTACG...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAATTTGGACGCGCGCCTaGCTCCTGGCTTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGREIWTRA*LLASVT
Trigger: GGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAAT...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACTTCACCTTGTGGTGTTaGGGTGTCCGAGAGAACGGT +
Preference number: 4 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHFTLWC*GVRENG
Trigger: ACCGTTCTCTCGGACACCCCAACACCACAAGGTGAA...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGTGTTGTGTCCTGAAATaGGCCCAAGTTCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: PAQYCSCGWLHLVREAPACCVLK*AQVQKT
Trigger: CGTTTTCTGAACTTGGGCCCATTTCAGGACACAACA...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGAATCTGGGGAACTCTaGAGCATTGTCATTCACATC +
Preference number: 4 (lower is better)
Translates to: VGCTLSAKHPRRTSGFGRESGEL*SIVIHI
Trigger: GATGTGAATGACAATGCTCCAGAGTTCCCCAGATTC...GCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCCGGACGATGTTCTCGTaGATGTTTTCCTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SLSSTVLLVWLAAPCPRSRTMFS*MFSSSS
Trigger: CGACGACGAGGAAAACATCCACGAGAACATCGTCCG...GCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSENVWI*TRACLL
Trigger: CAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTC...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCATATTGCTCGTGTGGTTaGCTGCACCTTGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: HSPAQYCSCGWLHLVREAYCSCG*LHLVRE
Trigger: TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA...TGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACTCCTCTTGGTCCGCTaGTGTGACTGTGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTLLLVR*CDCGLS
Trigger: AGACAAGCCACAGTCACATCAGCGGACCAAGAGGAG...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGATTTCATCTCTGCATTaGTGCCTTCATCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AQYCSCGWLHLVREAPAEISSLH*CLHPSP
Trigger: AGGACTTGGATGAAGGCATCAATGCAGAGATGAAAT...CTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAATCAGGATAGGCAGGTaGAAGACACTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRIRIGR*KTLCSC
Trigger: GCAGGAGCAGAGTGTCTTTCACCTGCCTATCCTGAT...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACACGAGCACTCTAACTTaGTGGCGTTGGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHTSTLT*WRWMSC
Trigger: ACAGCTCATCCAACGCCATCAAGTTAGAGTGCTCGT...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTCCAGGGCGGGCGTTCTaGTCACGTAGCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGPGRAF*SRSCLP
Trigger: GGGGAGGCAGCTACGTGAGCAGAACGCCCGCCCTGG...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp GATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGCGGGCTCCATTGGCCTaGCCGTCCGCCTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: DTRVELSAFNWHLCIQGQRAPLA*PSACLG
Trigger: CCCTAGACAGGCGGACGGGCAGGCCAATGGAGCCCG...CTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAAGACACTCTGCTCCTaGTGCCGGAAACCAGACCTC +
Preference number: 4 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPKTLCS*CRKPDL
Trigger: GAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGTCTT...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGGGGCTGCCCGCTATCTaGTATCAGGATAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWGLPAI*YQDRQV
Trigger: CACCTGCCTATCCTGATAGCAGATAGCGGGCAGCCC...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAACTGCTCAGCACGGGCTaGCCGCTATCTGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGRELLSTG*PLSAIR
Trigger: CCTGATAGCAGATAGCGGGCAGCCCGTGCTGAGCAG...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAGAGCTCTGTTCGCCTaGTCACCCCCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: KPPLSEHLGLQAFAHSVRRALFA*SPPFSL
Trigger: GAGTGAGAATGGGGGTGAGCAGGCGAACAGAGCTCT...TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGATCTGTGGCTGTCACTTaGATGACGGAGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRSVAVT*MTEVPT
Trigger: TGTGGGTACCTCCGTCATCCAAGTGACAGCCACAGA...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCCCGGCTCAAACTGACTaGGAGCATGTAGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQAPAQTD*EHVGLW
Trigger: CCAGAGGCCTACATGCTCCCAGTCAGTTTGAGCCGG...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGGACGATGTTCTCGTaGATGTTTTCCTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVRTMFS*MFSSSS
Trigger: CGACGACGAGGAAAACATCCACGAGAACATCGTCCG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCGCGCGCCTGCCTCCTaGCTTCCGTCACCACAGCGG +
Preference number: 4 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGRAPAS*LPSPQR
Trigger: CCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCG...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCTATTGCTCGTGTGGTTaGCTGCACCTTGTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVYCSCG*LHLVRE
Trigger: TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGCTCCTCTTGGTCCGCTaGTGTGACTGTGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWLLLVR*CDCGLS
Trigger: AGACAAGCCACAGTCACATCAGCGGACCAAGAGGAG...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp ACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATTGGCTGTCACTTGGATaGCGGAGGTACCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TLVRTPWTPSLRTQCQKNWLSLG*RRYPQG
Trigger: CCCCTGTGGGTACCTCCGTCATCCAAGTGACAGCCA...ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAAATATGGCTGGCCCTaGAGAATGCTGTACACCACC +
Preference number: 4 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRKYGWP*RMLYTT
Trigger: GGTGGTGTACAGCATTCTTCAGGGCCAGCCATATTT...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCCACGTCTTCCACACTaGTGTGCACTGTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVPRLPH*CALLLC
Trigger: ACACAACAACAGTGCACATCAGTGTGGAAGACGTGG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAACGCCCCGGCTCAAACTaGCTGGGAGCATGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKRPGSN*LGACRP
Trigger: AGGCCTACATGCTCCCAGTCAGTTTGAGCCGGGGCG...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCAGCCTCATGGACAAAATaGGCAACACCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: HSPAQYCSCGWLHLVREAASWTK*ATPALR
Trigger: TCTTAGTGCTGGTGTTGCTCATTTTGTCCATGAGGC...TGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACTTTCCTCGTCGTCGATaGTGTATGGTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHFPRRR*CMVVSG
Trigger: ACCGGAAACAACCATACATCATCGACGACGAGGAAA...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGTTGGTTTCTGTGGTTTaGGCCAGCAAAACTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LAAPCPRSTRGERLDLDALVSVV*ASKTLK
Trigger: TTTAAGAGTTTTGCTGGCTCAAACCACAGAAACCAA...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACACACCAACCCCGCCGATaGCCTGCCCTGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTHQPRR*PALPSR
Trigger: GCGGGAGGGCAGGGCAGGGCATCGGCGGGGTTGGTG...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp AGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAACGGGCTCCATTGGCCTaGCCGTCCGCCTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLNLVSKGLREIPSIPEQRAPLA*PSACLG
Trigger: CCCTAGACAGGCGGACGGGCAGGCCAATGGAGCCCG...TTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACAGAAATGCTGACCATTaGGTGGGTCATCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHRNADH*VGHLGP
Trigger: TGGACCAAGATGACCCACGCAATGGTCAGCATTTCT...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGACGTCGTCATCACAGCTaGACACTTGGATGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KPPLSEHLGLQAFAHSVRRRHHS*TLGWSV
Trigger: CACTGACCATCCAAGTGTGCAGCTGTGATGACGACG...TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCCGTAGCTGTGGACAGTaGTGTTCACTGCGCACGTCT +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQARSCGQ*CSLRTS
Trigger: AGACGTGCGCAGTGAACAGCACTGTCCACAGCTACG...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGGGAGTCGAAGGGCGGTaGCCACAGGTCCATGTCGGC +
Preference number: 4 (lower is better)
Translates to: DTRVELSAFNWHLCIQGQGVEGR*PQVHVG
Trigger: GCCGACATGGACCTGTGGGCACCGCCCTTCGACTCC...CTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAATTGAAGTTGACTTCCTaGCACCGCCGGCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGRELKLTS*HRRRLS
Trigger: GGAGAGTCGCCGGCGGTGCCAGGAAGTCAACTTCAA...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTTTGCGTGGGTCATCTTaGTCCACCGCACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLLRGSS*STALTV
Trigger: GACAGTGAGTGCGGTGGACCAAGATGACCCACGCAA...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGCTTGTCAGAACACCTTaGACTCCAAGCCTTCGCACA +
Preference number: 4 (lower is better)
Translates to: ILTLQHSIARVVGCTLSALVRTP*TPSLRT
Trigger: TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAG...CGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 72 bp ACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTaGTCAGAACACCTTGGACTCCAAGCCTTCGCACAC +
Preference number: 4 (lower is better)
Translates to: TKALANGREKPP*SEHLGLQAFAH
Trigger: GTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCACCGAGAGGATGTATTTaGTGGATCCGTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSPRGCI*WIRLPC
Trigger: ACAGGGGAGACGGATCCATCAAATACATCCTCTCGG...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACAGAAGTACAAGGACATaGCAAGTCCAAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHRSTRT*QVQASS
Trigger: AGAACTGGCTTGGACTTGGCATGTCCTTGTACTTCT...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAACTGGATCAGCTGTCCTaGCTTGGCGTTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGRELDQLS*LGVLTD
Trigger: GTCTGTGAGAACGCCAAGGCAGGACAGCTGATCCAG...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAATCAGTGTGCCTGTGCTaGTCAGCACGGGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLNLVSKGLREIPSIPEQSVCLC*SARAAR
Trigger: GCGGGCAGCCCGTGCTGAGCAGCACAGGCACACTGA...TTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp GATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGTGGTCAGTGTGCCTGTaGTGCTCAGCACGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DTRVELSAFNWHLCIQGQWSVCL*CSARAA
Trigger: GGCAGCCCGTGCTGAGCAGCACAGGCACACTGACCA...CTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCGACAGTGCTGTTCACTaGGCACGTCTGAGGCACGTA +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIDSAVH*ARLRHV
Trigger: TACGTGCCTCAGACGTGCGCAGTGAACAGCACTGTC...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCAGTTGTTGGTCACATCTaGGTCCTTGGCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: HSPAQYCSCGWLHLVREAVVGHI*VLGRND
Trigger: ATCATTTCTGCCAAGGACCCAGATGTGACCAACAAC...TGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGTCACAGCTGCACACTTaGATGGTCAGTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWSQLHT*MVSVPV
Trigger: CACAGGCACACTGACCATCCAAGTGTGCAGCTGTGA...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGGTTCCGAGTCCGACGTaGCCGACTGCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: YESRTFCFQLASLYPRPEVPSPT*PTAGSS
Trigger: TGAGCTCCCTGCAGTCGGCCACGTCGGACTCGGAAC...CTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGTGGGTTGGTTTCTGTaGTTTGAGCCAGCAAAACTC +
Preference number: 4 (lower is better)
Translates to: SHSPAQYCSCGWLHLVREVGWFL*FEPAKL
Trigger: GAGTTTTGCTGGCTCAAACCACAGAAACCAACCCAC...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp AAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGATCCCCTGTCCATATCTaGATGAAGCTTGCCGACATA +
Preference number: 4 (lower is better)
Translates to: KPPLSEHLGLQAFAHSVRSPVHI*MKLADI
Trigger: TATGTCGGCAAGCTTCATTCAGATATGGACAGGGGA...TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGGTCCTTGGCAGAAATaGTCTGTATGGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SHSPAQYCSCGWLHLVREGPWQK*SVWLFQ
Trigger: TTGGAACAACCATACAGATCATTTCTGCCAAGGACC...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCATTTCCTCGTCGTCGATaGTGTATGGTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPFPRRR*CMVVSG
Trigger: ACCGGAAACAACCATACATCATCGACGACGAGGAAA...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGCACAGTTAAATAGCTaGGAGGAGACACGAGCACTC +
Preference number: 4 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSAQLNS*EETRAL
Trigger: GAGTGCTCGTGTCTCCTCTCAGCTATTTAACTGTGC...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTCTGCTCAGCACGGGCTaGCCGCTATCTGCTATCAGG +
Preference number: 4 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLLLSTG*PLSAIR
Trigger: CCTGATAGCAGATAGCGGGCAGCCCGTGCTGAGCAG...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTACCCATCCACCCCCATaGAAGGCTGATTCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLTHPPP*KADSVL
Trigger: TAAGACTGAATCAGCCTTGCATGGGGGTGGATGGGT...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACACGGCTGGTGCCCCGCTaGGTCTCTTCACCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTRLVPR*VSSPLL
Trigger: GAGCAGGGGTGAAGAGACCCAGCGGGGCACCAGCCG...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAACCCAGCTCCTCTTaGTCCGCTGATGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGREKPSSS*SADVTV
Trigger: CACAGTCACATCAGCGGACCAAGAGGAGCTGGGTTT...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCGCCCTTAGAGTATACTaGGCTCTTTCCTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIALRVY*ALSSRS
Trigger: CGACCGAGAGGAAAGAGCCCAGTATACTCTAAGGGC...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTTCTCTAGGTGAGGATTaGCTCCCTCCACCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLSLGED*LPPPLR
Trigger: CCTTAAAGGTGGAGGGAGCCAATCCTCACCTAGAGA...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGGGAAACCAGACCTCCTaGTTAGAATCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWGNQTS*LESVLC
Trigger: ACACAGCACGGATTCTAACCAGGAGGTCTGGTTTCC...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCTCACAGCTGCACACTTaGATGGTCAGTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKISQLHT*MVSVPV
Trigger: CACAGGCACACTGACCATCCAAGTGTGCAGCTGTGA...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCTCGAACATATACGTCTaGAGGGAGTCGAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKISNIYV*RESKGG
Trigger: ACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGA...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGENVWI*TRACLL
Trigger: CAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTC...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCTCCACATTTGGCACATaGAAGAGACATCTACAGTGC +
Preference number: 4 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVSTFGT*KRHLQC
Trigger: GCACTGTAGATGTCTCTTCCATGTGCCAAATGTGGA...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAATGGAGTATCTGATTaGGTTGTTGGTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: ILTLQHSIARVVGCTLSANGVSD*VVGHIW
Trigger: CCAGATGTGACCAACAACTCAATCAGATACTCCATT...CGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TGGCTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTCTGGGCTGCAGGACATaGCGTGGCCGTCGTCATCAC +
Preference number: 4 (lower is better)
Translates to: WLSFVASNLHIWHMEETSLGCRT*RGRRHH
Trigger: GTGATGACGACGGCCACGTCATGTCCTGCAGCCCAG...AGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTTTCGCAAAGTCTCCGTaGGGTTGCCAGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLFAKSP*GCQELG
Trigger: CCCCAACTCCTGGCAACCGCACGGAGACTTTGCGAA...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAGACAGTGCTGTTCACTaGGCACGTCTGAGGCACGTA +
Preference number: 4 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKDSAVH*ARLRHV
Trigger: TACGTGCCTCAGACGTGCGCAGTGAACAGCACTGTC...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp ACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATTCTGTGGCTGTCACTTaGATGACGGAGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: TLVRTPWTPSLRTQCQKNSVAVT*MTEVPT
Trigger: TGTGGGTACCTCCGTCATCCAAGTGACAGCCACAGA...ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAAAGCTTCATAGAATCTaGGGAACTCTGGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: SHSPAQYCSCGWLHLVREKLHRI*GTLEHC
Trigger: ACAATGCTCCAGAGTTCCCCAGATTCTATGAAGCTT...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAACGTGCTGTGTTATCTTaGTTGTCCCTTATGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SHSPAQYCSCGWLHLVRERAVLS*LSLMVK
Trigger: CTTTACCATAAGGGACAACCAAGATAACACAGCACG...TTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAACTGCAGGACATGACGTaGCCGTCGTCATCACAGCTG +
Preference number: 4 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKLQDMT*PSSSQL
Trigger: CAGCTGTGATGACGACGGCCACGTCATGTCCTGCAG...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACACCCGGGGGTTCCACATaGCCGCGATGTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTPGGST*PRCRRP
Trigger: AGGCCTTCGACATCGCGGCCATGTGGAACCCCCGGG...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCAAAGGCCTTAGCGAATaGCAGAGAAAAGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQAKGLSE*QRKATL
Trigger: AAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTT...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 72 bp CGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTaGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RMAEKSHPCQNT*DSKPSHTVSEK
Trigger: TTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAACCGAGAGGATGTATTTaGTGGATCCGTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKPRGCI*WIRLPC
Trigger: ACAGGGGAGACGGATCCATCAAATACATCCTCTCGG...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGGCTTCTTCACAGTTATaGTACCAACTTGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: ILTLQHSIARVVGCTLSAASSQL*YQLGNW
Trigger: CCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGC...CGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACATTCTGCTCACGTAGCTaGCTCCCCCACTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTFCSRS*LPHWAA
Trigger: AGCCGCCCAGTGGGGGAGGCAGCTACGTGAGCAGAA...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACATCTTCCAGGGTCACTaGTTCTATCAATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHIFQGH*FYQWSI
Trigger: GATACTCCATTGATAGAAGCAGTGACCCTGGAAGAT...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAACTGGATCAGCTGTCCTaGCTTGGCGTTCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKLDQLS*LGVLTD
Trigger: GTCTGTGAGAACGCCAAGGCAGGACAGCTGATCCAG...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAATATGGTTGTTTCCGGTaGCGCCTCATGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGREYGCFR*RLMDKM
Trigger: CATTTTGTCCATGAGGCGGCACCGGAAACAACCATA...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAAAACCCAGCTCCTCTTaGTCCGCTGATGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKKPSSS*SADVTV
Trigger: CACAGTCACATCAGCGGACCAAGAGGAGCTGGGTTT...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAAGCTTCATAGAATCTaGGGAACTCTGGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPKLHRI*GTLEHC
Trigger: ACAATGCTCCAGAGTTCCCCAGATTCTATGAAGCTT...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAACCGGCTCAAACTGACTaGGAGCATGTAGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLNLVSKGLREIPSIPEQPAQTD*EHVGLW
Trigger: CCAGAGGCCTACATGCTCCCAGTCAGTTTGAGCCGG...TTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAGGCCTTAGCGAATaGCAGAGAAAAGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIKGLSE*QRKATL
Trigger: AAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTT...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
3UTR CAA 72 bp CATCCACCCCCATGCAAGGCTGATTCAGTCTTAACCTaGTCTCAAAAGGGTTACGGGAAATTCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: HPPPCKADSVLT*SQKGYGKFHPS
Trigger: GGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGAATCAGCCTTGCATGGGGGTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAATTTCATCTCTGCATTaGTGCCTTCATCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSISSLH*CLHPSP
Trigger: AGGACTTGGATGAAGGCATCAATGCAGAGATGAAAT...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAGCTTCTTCACAGTTATaGTACCAACTTGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTASSQL*YQLGNW
Trigger: CCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGC...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTATCAGGATAGGCAGGTaGAAGACACTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGIRIGR*KTLCSC
Trigger: GCAGGAGCAGAGTGTCTTTCACCTGCCTATCCTGAT...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTCCAAGCCAGTTCTTTaGATTGCTCATTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: LANGREKPPLSEHLGLQASKPVL*IAHSTR
Trigger: TCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGA...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGGTAGGTCGGGTCATCTaGATCTGTGGCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: YESRTFCFQLASLYPRPEVGRVI*ICGCHL
Trigger: CAAGTGACAGCCACAGATGCAGATGACCCGACCTAC...CTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCTCTTCCTTCACCAAGACACTCTGCTCCTaGTGCCGGAAACCAGACCTC +
Preference number: 4 (lower is better)
Translates to: SLGSATKLEHKVNVSSFTKTLCS*CRKPDL
Trigger: GAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGTCTT...GGTGAAGGAAGAGACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACGAGAGTAGAACTTTCTaGTTTCAATTGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHESRTF*FQLASL
Trigger: CAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTC...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCGAATCTGGGGAACTCTaGAGCATTGTCATTCACATC +
Preference number: 4 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIESGEL*SIVIHI
Trigger: GATGTGAATGACAATGCTCCAGAGTTCCCCAGATTC...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAGGAAACCAGACCTCCTaGTTAGAATCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKGNQTS*LESVLC
Trigger: ACACAGCACGGATTCTAACCAGGAGGTCTGGTTTCC...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: YESRTFCFQLASLYPRPETVLLV*LAAPCP
Trigger: CGGACAAGGTGCAGCCAACCACACGAGCAATACTGT...CTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp TTTCTTGTGGGTTGGTTTCTGTGGTTTGAGCCAGCAAAACTCTTAAATGGAGAAAAACGCATCTCTAGGTaGGGATTGGCTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FLVGWFLWFEPAKLLNGEKRISR*GLAPST
Trigger: GGTGGAGGGAGCCAATCCTCACCTAGAGATGCGTTT...TTCTCCATTTAAGAGTTTTGCTGGCTCAAACCACAGAAACCAACCCACAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAATTTCTGGTTTCATTCTaGACAATTTTGCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGREFLVSF*TILQGH
Trigger: GTGCCCCTGCAAAATTGTTCAGAATGAAACCAGAAA...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTGAAGTGCTAAGGTACTaGGATGCAGTACATCATATT +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLEVLRY*DAVHHI
Trigger: AATATGATGTACTGCATCTCAGTACCTTAGCACTTC...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp ACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATAGAAGTACAAGGACATaGCAAGTCCAAGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TLVRTPWTPSLRTQCQKNRSTRT*QVQASS
Trigger: AGAACTGGCTTGGACTTGGCATGTCCTTGTACTTCT...ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAGAGTAGAACTTTCTaGTTTCAATTGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSESRTF*FQLASL
Trigger: CAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTC...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTAAGCCCTCTAACCCATaGTTTTGTCAGATACTTCTT +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLKPSNP*FCQILL
Trigger: AAGAAGTATCTGACAAAAGCATGGGTTAGAGGGCTT...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp ACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATTACCAGAAGTCCACATaGGATTGCCAGGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TLVRTPWTPSLRTQCQKNYQKST*DCQVFR
Trigger: TCTGAAAACCTGGCAATCCCATGTGGACTTCTGGTA...ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp TCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCTCTTCCTTCACCTTCACCTTGTGGTGTTaGGGTGTCCGAGAGAACGGT +
Preference number: 4 (lower is better)
Translates to: SLGSATKLEHKVNVSSFTFTLWC*GVRENG
Trigger: ACCGTTCTCTCGGACACCCCAACACCACAAGGTGAA...GGTGAAGGAAGAGACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGTGCAAAAGAGGCCTTCATCCAAGTCCTTaGCAAACACTCTCCCGACAG +
Preference number: 4 (lower is better)
Translates to: HLISTFGTWKRHLQCKRGLHPSP*QTLSRQ
Trigger: CTGTCGGGAGAGTGTTTGCCAAGGACTTGGATGAAG...GCCTCTTTTGCACTGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp AGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAACAGTATTGCTCGTGTaGTTGGCTGCACCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SLNLVSKGLREIPSIPEQTVLLV*LAAPCP
Trigger: CGGACAAGGTGCAGCCAACCACACGAGCAATACTGT...TTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTCTTGTCAGAACACCTTaGACTCCAAGCCTTCGCACA +
Preference number: 4 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGLVRTP*TPSLRT
Trigger: TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAG...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp TCAGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACGCCAGAGCCTTTCTGTaGTGGAAAAGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: SVLTLSQKGYGKFHPSQNARAFL*WKSDKG
Trigger: GCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGGC...GTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAAGCCAGAGCCTTTCTGTaGTGGAAAAGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKARAFL*WKSDKG
Trigger: GCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGGC...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR TCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAACTTATGCTTCCTAAATaGGATCCCGTTTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGRELMLPK*DPVSSQ
Trigger: TTGACTTGAAACGGGATCTCATTTAGGAAGCATAAG...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACACGCCTGTCTAGGGCTTaGGCCCTTAGAGTATACTGG +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTRLSRA*ALRVYW
Trigger: CCAGTATACTCTAAGGGCTCAAGCCCTAGACAGGCG...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCACCCCCATGCAAGGCTaGTTCAGTCTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGTPMQG*FSLNLV
Trigger: GACAAGGTTAAGACTGAATCAGCCTTGCATGGGGGT...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAGGACAGTGATATTATaGCAAGAAAATTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PEPFCGGKVTKALANGRERTVIL*QENSSR
Trigger: CCGGGAAGAATTTTCTTGGCATAATATCACTGTCCT...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAAAGAAATGCTGACCATTaGGTGGGTCATCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKRNADH*VGHLGP
Trigger: TGGACCAAGATGACCCACGCAATGGTCAGCATTTCT...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTGTTATGATACCAACTTaGAAATTGGGATCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SEWQRKATLVRTPWTPSLVMIPT*KLGSVL
Trigger: TAGCACAGATCCCAATTTCCAAGTTGGTATCATAAC...AAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGGGAACACTTCCAACCTaGGAGGGATTGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: YESRTFCFQLASLYPRPEGTLPT*EGLFIS
Trigger: GGAAATGAACAATCCCTCCCAGGTTGGAAGTGTTCC...CTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTGGAACACTTCCAACCTaGGAGGGATTGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLGTLPT*EGLFIS
Trigger: GGAAATGAACAATCCCTCCCAGGTTGGAAGTGTTCC...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TTTCTTGTGGGTTGGTTTCTGTGGTTTGAGCCAGCAAAACTCTTAAATGGAGAAGTCGTCGATGATGTATaGTTGTTTCCGGTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FLVGWFLWFEPAKLLNGEVVDDV*LFPVPP
Trigger: AGGCGGCACCGGAAACAACCATACATCATCGACGAC...TTCTCCATTTAAGAGTTTTGCTGGCTCAAACCACAGAAACCAACCCACAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp TCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCTCTTCCTTCACCGCCTCATGGACAAAATaGGCAACACCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: SLGSATKLEHKVNVSSFTASWTK*ATPALR
Trigger: TCTTAGTGCTGGTGTTGCTCATTTTGTCCATGAGGC...GGTGAAGGAAGAGACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTTGTTGTGTCCTGAAATaGGCCCAAGTTCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLCCVLK*AQVQKT
Trigger: CGTTTTCTGAACTTGGGCCCATTTCAGGACACAACA...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp TCAGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACGTTGTTGGTCACATCTaGGTCCTTGGCAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: SVLTLSQKGYGKFHPSQNVVGHI*VLGRND
Trigger: ATCATTTCTGCCAAGGACCCAGATGTGACCAACAAC...GTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp TGGCTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTCTTGATGGCGTTGGATaGGCTGTAATGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: WLSFVASNLHIWHMEETSLDGVG*AVMPTS
Trigger: AGATGTTGGCATTACAGCTCATCCAACGCCATCAAG...AGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCGCCAGTTCTTTGCATTaGTCATTCTACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGASSLH*SFYQKS
Trigger: GGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGC...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TCAGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACTCCAAGCCAGTTCTTTaGATTGCTCATTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: SVLTLSQKGYGKFHPSQNSKPVL*IAHSTR
Trigger: TCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGA...GTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACATCTCTAGGTGAGGATTaGCTCCCTCCACCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTSLGED*LPPPLR
Trigger: CCTTAAAGGTGGAGGGAGCCAATCCTCACCTAGAGA...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCAATGGAGTATCTGATTaGGTTGTTGGTCACATCTGG +
Preference number: 4 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGNGVSD*VVGHIW
Trigger: CCAGATGTGACCAACAACTCAATCAGATACTCCATT...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR GCA 90 bp TTTCTTGTGGGTTGGTTTCTGTGGTTTGAGCCAGCAAAACTCTTAAATGGAGAAGTGTCACAGCTTTTCTaGCTTCGGATGTTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: FLVGWFLWFEPAKLLNGEVSQLF*LRMFRK
Trigger: TTTGCGAAACATCCGAAGGCAGAAAAGCTGTGACAC...TTCTCCATTTAAGAGTTTTGCTGGCTCAAACCACAGAAACCAACCCACAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp CATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGTGCAAAAGAGGCTTGATTGGACACTTATaGTTCCTAAATGAGATCCCG +
Preference number: 4 (lower is better)
Translates to: HLISTFGTWKRHLQCKRGLIGHL*FLNEIP
Trigger: CGGGATCTCATTTAGGAAGCATAAGTGTCCAATCAA...GCCTCTTTTGCACTGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR GCA 90 bp TCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCTCTTCCTTCACCATCTTCCAGGGTCACTaGTTCTATCAATGGAGTATC +
Preference number: 4 (lower is better)
Translates to: SLGSATKLEHKVNVSSFTIFQGH*FYQWSI
Trigger: GATACTCCATTGATAGAAGCAGTGACCCTGGAAGAT...GGTGAAGGAAGAGACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR TCA 90 bp CTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACAGGTCCTTGGCAGAAATaGTCTGTATGGTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSFVASNLHIWHMEETSTGPWQK*SVWLFQ
Trigger: TTGGAACAACCATACAGATCATTTCTGCCAAGGACC...TGTAGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CCA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTGTTATGATACCAACTTaGAAATTGGGATCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLVMIPT*KLGSVL
Trigger: TAGCACAGATCCCAATTTCCAAGTTGGTATCATAAC...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CCA 90 bp GTAATGCCAACATCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCCGTGCTGTGTTATCTTaGTTGTCCCTTATGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VMPTSLGSATKLEHKVNVRAVLS*LSLMVK
Trigger: CTTTACCATAAGGGACAACCAAGATAACACAGCACG...GACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGATGTTGGCATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS TCA 90 bp TGCCCTGCCCTGCCCTCCCGCGGCCACCGCGTTCGGCCTGTCCAGTaGGAAGAGCCCCCTGGTCGCGGTCACCGTCCCCCGAGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: CPALPSRGHRVRPVQ*EEPPGRGHRPPSVA
Trigger: CGCCACGCTCGGGGGACGGTGACCGCGACCAGGGGGCTCTTCTCACTGGACAGGCCGAACGCGGTGGCCGCGGGAGGGCAGGGCAGGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS CCA 90 bp CTCCCGCGGCCACCGCGTTCGGCCTGTCCAGTGAGAAGAGCCCCCTaGTCGCGGTCACCGTCCCCCGAGCGTGGCGCGCGGTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: LPRPPRSACPVRRAP*SRSPSPERGARSAS
Trigger: GGAAGCGGACCGCGCGCCACGCTCGGGGGACGGTGACCGCGACCAGGGGGCTCTTCTCACTGGACAGGCCGAACGCGGTGGCCGCGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 90 bp GTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTaGCTCCTGGCTTCCGTCACCACAGCGGCGCGGGTCCCTCCGACG +
Preference number: 5 (lower is better)
Translates to: VREAPAENVWIWTRA*LLASVTTAARVPPT
Trigger: CGTCGGAGGGACCCGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 90 bp AAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCCTCCTaGCTTCCGTCACCACAGCGGCGCGGGTCCCTCCGACGCCCCGTA +
Preference number: 5 (lower is better)
Translates to: KHPRRTSGFGRAPAS*LPSPQRRGSLRRPV
Trigger: TACGGGGCGTCGGAGGGACCCGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 90 bp CCTTCGGTCCTAACTGCTCCAGGGCGGGCGTTCTGCTCACGTAGCTaGCTCCCCCACTGGGCGGCTGGTGCCCCGCTGGGTCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PSVLTAPGRAFCSRS*LPHWAAGAPLGLFT
Trigger: GGTGAAGAGACCCAGCGGGGCACCAGCCGCCCAGTGGGGGAGGCAGCTACGTGAGCAGAACGCCCGCCCTGGAGCAGTTAGGACCGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 90 bp ACTCTCCGGAGACCTTCGGTCCTAACTGCTCCAGGGCGGGCGTTCTaGTCACGTAGCTGCCTCCCCCACTGGGCGGCTGGTGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: TLRRPSVLTAPGRAF*SRSCLPHWAAGAPL
Trigger: CAGCGGGGCACCAGCCGCCCAGTGGGGGAGGCAGCTACGTGAGCAGAACGCCCGCCCTGGAGCAGTTAGGACCGAAGGTCTCCGGAGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS CCA 90 bp TGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTGGCTTCCGTCACCACAGCGGCGCGG +
Preference number: 5 (lower is better)
Translates to: WLHLVREAPAENVWI*TRACLLASVTTAAR
Trigger: CCGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 90 bp CTCAGCGACCCCGCCACAGAGCCGTCCCCCTCGAACATATACGTCTaGAGGGAGTCGAAGGGCGGTGCCCACAGGTCCATGTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LSDPATEPSPSNIYV*RESKGGAHRSMSAS
Trigger: CGAGGCCGACATGGACCTGTGGGCACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGAGGGGGACGGCTCTGTGGCGGGGTCGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 90 bp TGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTaGATTTGGACGCGCGCCTGCCTCCTGGCTTCCGTCACCACAGCG +
Preference number: 5 (lower is better)
Translates to: CGWLHLVREAPAENV*IWTRACLLASVTTA
Trigger: CGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 90 bp GCCGTCCCCCTCGAACATATACGTCTGGAGGGAGTCGAAGGGCGGTaGCCACAGGTCCATGTCGGCCTCGTAGAGCTTGGCCAGCACGTA +
Preference number: 5 (lower is better)
Translates to: AVPLEHIRLEGVEGR*PQVHVGLVELGQHV
Trigger: TACGTGCTGGCCAAGCTCTACGAGGCCGACATGGACCTGTGGGCACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGAGGGGGACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 90 bp CTGCCTTCGGATGTTTCGCAAAGTCTCCGTGCGGTTGCCAGGAGTTaGGGGGTACTGCCAAGTGCACCAACCCCGCCGATGCCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPSDVSQSLRAVARS*GVLPSAPTPPMPCP
Trigger: AGGGCAGGGCATCGGCGGGGTTGGTGCACTTGGCAGTACCCCCCAACTCCTGGCAACCGCACGGAGACTTTGCGAAACATCCGAAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 90 bp CTCGTAGAGCTTGGCCAGCACGTAGCTGTGGACAGTGCTGTTCACTaGGCACGTCTGAGGCACGTAGCGGGAGAGGCTCTCGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: LVELGQHVAVDSAVH*ARLRHVAGEALDLG
Trigger: CCCGAGATCGAGAGCCTCTCCCGCTACGTGCCTCAGACGTGCGCAGTGAACAGCACTGTCCACAGCTACGTGCTGGCCAAGCTCTACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS GCA 90 bp CCATGTCGGCCTCGTAGAGCTTGGCCAGCACGTAGCTGTGGACAGTaGTGTTCACTGCGCACGTCTGAGGCACGTAGCGGGAGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PCRPRRAWPARSCGQ*CSLRTSEARSGRGS
Trigger: AGAGCCTCTCCCGCTACGTGCCTCAGACGTGCGCAGTGAACAGCACTGTCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCGACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 90 bp AATGAGGGCGCCCCGGCTCAAACTGACTGGGAGCATGTAGGCCTCTaGGCTGCAGGACATGACGTGGCCGTCGTCATCACAGCTGCACAC +
Preference number: 5 (lower is better)
Translates to: NEGAPAQTDWEHVGL*AAGHDVAVVITAAH
Trigger: GTGTGCAGCTGTGATGACGACGGCCACGTCATGTCCTGCAGCCCAGAGGCCTACATGCTCCCAGTCAGTTTGAGCCGGGGCGCCCTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS CCA 90 bp AGTCGAAGGGCGGTGCCCACAGGTCCATGTCGGCCTCGTAGAGCTTaGCCAGCACGTAGCTGTGGACAGTGCTGTTCACTGCGCACGTCT +
Preference number: 5 (lower is better)
Translates to: SRRAVPTGPCRPRRA*PARSCGQCCSLRTS
Trigger: AGACGTGCGCAGTGAACAGCACTGTCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCGACATGGACCTGTGGGCACCGCCCTTCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS-3UTR CAA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCCCCGAGAGGATGTATTaGATGGATCCGTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: HLVREAPAENVWIWTRACPERMY*MDPSPL
Trigger: CAGGGGAGACGGATCCATCAAATACATCCTCTCGGG...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGATGTCCTGCCGCGTCTaGGGGGCGGCCCCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWMSCRV*GAAPAC
Trigger: GCAGGCGGGGGCCGCCCCCAAGACGCGGCAGGACAT...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: YCSCGWLHLVREAPAENVGERLD*DARLPP
Trigger: AGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCC...GACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCTGACTCGGGCTCCATaGGCCTGCCCGTCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: PHSHSPAQYCSCGWLHLVLTRAP*ACPSAC
Trigger: ACAGGCGGACGGGCAGGCCAATGGAGCCCGAGTCAG...GACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAATGTCCTGCCGCGTCTaGGGGGCGGCCCCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: PEPFCGGKVTKALANGREMSCRV*GAAPAC
Trigger: GCAGGCGGGGGCCGCCCCCAAGACGCGGCAGGACAT...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGCCACGAGCACTCTAACTaGATGGCGTTGGATGAGCTG +
Preference number: 5 (lower is better)
Translates to: HLVREAPAENVWIWTRACHEHSN*MALDEL
Trigger: CAGCTCATCCAACGCCATCAAGTTAGAGTGCTCGTG...GCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAGTGGTTGGCTGCACCTaGTCCGCGAAGCACCCGCGG +
Preference number: 5 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTVVGCT*SAKHPR
Trigger: CCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCAC...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS TCA 90 bp CTGCTCAGCACGGGCTGCCCGCTATCTGCTATCAGGATAGGCAGGTaGAAGACACTCTGCTCCTGCTGCCGGAAACCAGACCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLSTGCPLSAIRIGR*KTLCSCCRKPDLLV
Trigger: AACCAGGAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGTCTTTCACCTGCCTATCCTGATAGCAGATAGCGGGCAGCCCGTGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS-3UTR CAA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGGAGTATCTGATTGAGTaGTTGGTCACATCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: APCPRSTRGERLDLDARLEYLIE*LVTSGS
Trigger: GGACCCAGATGTGACCAACAACTCAATCAGATACTC...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCCCGGTCTAGGGGTCTaGCTGTCATTAGGGCACCTG +
Preference number: 5 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHPGLGV*LSLGHL
Trigger: CAGGTGCCCTAATGACAGCAAGACCCCTAGACCGGG...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGATCACAGCTGCACACTaGGATGGTCAGTGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PAQYCSCGWLHLVREAPAITAAH*DGQCAC
Trigger: ACAGGCACACTGACCATCCAAGTGTGCAGCTGTGAT...CGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAACTGACTCGGGCTCCATaGGCCTGCCCGTCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: PEPFCGGKVTKALANGRELTRAP*ACPSAC
Trigger: ACAGGCGGACGGGCAGGCCAATGGAGCCCGAGTCAG...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGCCAACCTGGGAGGGATaGTTCATTTCCATAGCAAGG +
Preference number: 5 (lower is better)
Translates to: AQYCSCGWLHLVREAPAEPTWEG*FISIAR
Trigger: CCTTGCTATGGAAATGAACAATCCCTCCCAGGTTGG...CTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACTCAATCTGCTTGAAGTaGACTTCCTGGCACCGCCGG +
Preference number: 5 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHSICLK*TSWHRR
Trigger: CCGGCGGTGCCAGGAAGTCAACTTCAAGCAGATTGA...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACATTGCGTGGGTCATCTaGGTCCACCGCACTCACTGT +
Preference number: 5 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHIAWVI*VHRTHC
Trigger: ACAGTGAGTGCGGTGGACCAAGATGACCCACGCAAT...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LANGREKPPLSEHLGLQAGERLD*DARLPP
Trigger: AGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCC...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 90 bp AGCAGCCTCAGGAGCCAAGCTGTAGTAGAAATGCTGACCATTGCGTaGGTCATCTTGGTCCACCGCACTCACTGTCTGGATCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSLRSQAVVEMLTIA*VILVHRTHCLDQLS
Trigger: GGACAGCTGATCCAGACAGTGAGTGCGGTGGACCAAGATGACCCACGCAATGGTCAGCATTTCTACTACAGCTTGGCTCCTGAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS-3UTR CAA 90 bp GCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTGATACCAACTTGGAAATaGGGATCTGTGCTAATGTCA +
Preference number: 5 (lower is better)
Translates to: APCPRSTRGERLDLDARLIPTWK*GSVLMS
Trigger: TGACATTAGCACAGATCCCAATTTCCAAGTTGGTAT...CAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCCCCGGTCTAGGGGTCTaGCTGTCATTAGGGCACCTG +
Preference number: 5 (lower is better)
Translates to: LANGREKPPLSEHLGLQAPGLGV*LSLGHL
Trigger: CAGGTGCCCTAATGACAGCAAGACCCCTAGACCGGG...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACATGGTAAAGTTGGGGTaGTTAGCAGCCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: TLQHSIARVVGCTLSAKHMVKLG*LAASGA
Trigger: GGCTCCTGAGGCTGCTAACAACCCCAACTTTACCAT...GTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGA +
Preference number: 5 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHVLLVW*AAPCPR
Trigger: TCGCGGACAAGGTGCAGCCAACCACACGAGCAATAC...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAATCTGTGGCTGTCACTaGGATGACGGAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTICGCH*DDGGTH
Trigger: GTGGGTACCTCCGTCATCCAAGTGACAGCCACAGAT...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGCGGGGTGGGTTATCATaGACATCTGAGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: ILTLQHSIARVVGCTLSARGGLS*TSERVM
Trigger: CATCACCCTCTCAGATGTCAATGATAACCCACCCCG...CGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGTATTTCATCTCTGCATaGATGCCTTCATCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: AQYCSCGWLHLVREAPAEYFISA*MPSSKS
Trigger: GGACTTGGATGAAGGCATCAATGCAGAGATGAAATA...CTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAAGCATCAGCTGTCCTGCCTaGGCGTTCTCACAGACAAAA +
Preference number: 5 (lower is better)
Translates to: SLSSTVLLVWLAAPCPRSISCPA*AFSQTK
Trigger: TTTTGTCTGTGAGAACGCCAAGGCAGGACAGCTGAT...GCTTCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTGGACGCGACTTTCTGCTTTCAATaGGCATCTCTGTATCCAAGG +
Preference number: 5 (lower is better)
Translates to: LAAPCPRSTRGERLDLDATFCFQ*ASLYPR
Trigger: CCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGT...CGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGCCCGAGAGGATGTATTaGATGGATCCGTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWPERMY*MDPSPL
Trigger: CAGGGGAGACGGATCCATCAAATACATCCTCTCGGG...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAATCTGTGGCTGTCACTaGGATGACGGAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSICGCH*DDGGTH
Trigger: GTGGGTACCTCCGTCATCCAAGTGACAGCCACAGAT...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAGTCGATGATGTATGGTaGTTTCCGGTGCCGCCTCAT +
Preference number: 5 (lower is better)
Translates to: KPPLSEHLGLQAFAHSVRVDDVW*FPVPPH
Trigger: ATGAGGCGGCACCGGAAACAACCATACATCATCGAC...TCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAGTATTGCTCGTGTGGTaGGCTGCACCTTGTCCGCGA +
Preference number: 5 (lower is better)
Translates to: PEPFCGGKVTKALANGREVLLVW*AAPCPR
Trigger: TCGCGGACAAGGTGCAGCCAACCACACGAGCAATAC...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 90 bp GCGGACGATGTTCTCGTGGATGTTTTCCTCGTCGTCGATGATGTATaGTTGTTTCCGGTGCCGCCTCATGGACAAAATGAGCAACACCAG +
Preference number: 5 (lower is better)
Translates to: ADDVLVDVFLVVDDV*LFPVPPHGQNEQHQ
Trigger: CTGGTGTTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGAGAACATCGTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS-3UTR CAA 90 bp GCTCACCCCCATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACTTCAAGTCAATCTGCTaGAAGTTGACTTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: AHPHSHSPAQYCSCGWLHFKSIC*KLTSWH
Trigger: GTGCCAGGAAGTCAACTTCAAGCAGATTGACTTGAA...GTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAATGGGGGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCATCTGAGAGGGTGATGTaGACTGTTGTGGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSSERVM*TVVVPA
Trigger: AGCTGGGACCACAACAGTCAACATCACCCTCTCAGA...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAATGGTAAAGTTGGGGTaGTTAGCAGCCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: KSHPCQNTLDSKPSHTVSMVKLG*LAASGA
Trigger: GGCTCCTGAGGCTGCTAACAACCCCAACTTTACCAT...TGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ATTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGTCCCTTATGGTAAAGTaGGGGTTGTTAGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: ILTLQHSIARVVGCTLSASLMVK*GLLAAS
Trigger: TGAGGCTGCTAACAACCCCAACTTTACCATAAGGGA...CGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GTAATGCCAACATCTCTTGGTTCAGCCACTAAACTTGAGCATAAAGTCAATGTCGTGGTTGGCTGCACCTaGTCCGCGAAGCACCCGCGG +
Preference number: 5 (lower is better)
Translates to: VMPTSLGSATKLEHKVNVVVGCT*SAKHPR
Trigger: CCGCGGGTGCTTCGCGGACAAGGTGCAGCCAACCAC...GACATTGACTTTATGCTCAAGTTTAGTGGCTGAACCAAGAGATGTTGGCATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCTCTGAGAGGGTGATGTaGACTGTTGTGGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKISERVM*TVVVPA
Trigger: AGCTGGGACCACAACAGTCAACATCACCCTCTCAGA...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGATATCTGATTGAGTTGTaGGTCACATCTGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRYLIEL*VTSGSL
Trigger: CAAGGACCCAGATGTGACCAACAACTCAATCAGATA...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACTCCCTTATGGTAAAGTaGGGGTTGTTAGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHSLMVK*GLLAAS
Trigger: TGAGGCTGCTAACAACCCCAACTTTACCATAAGGGA...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp ACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCCTTGTCAGAACACCTaGGACTCCAAGCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: TLVRTPWTPSLRTQCQKNPCQNT*DSKPSH
Trigger: GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGG...ATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCAGAGAAAAGCCACCCTaGTCAGAACACCTTGGACTC +
Preference number: 5 (lower is better)
Translates to: LANGREKPPLSEHLGLQAREKPP*SEHLGL
Trigger: GAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCT...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAGATTCAGTCTTAACCTaGTCTCAAAAGGGTTACGGG +
Preference number: 5 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRDSVLT*SQKGYG
Trigger: CCCGTAACCCTTTTGAGACAAGGTTAAGACTGAATC...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 90 bp CAGCCCCCAGAAGTACAAGGACATGCCAAGTCCAAGCCAGTTCTTTaGATTGCTCATTCTACCAGAAGTCCACATGGGATTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: QPPEVQGHAKSKPVL*IAHSTRSPHGIARF
Trigger: AAACCTGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGTACTTCTGGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000538374.5
CDS GCA 90 bp TCGTGGATGTTTTCCTCGTCGTCGATGATGTATGGTTGTTTCCGGTaGCGCCTCATGGACAAAATGAGCAACACCAGCACTAAGAGGACA +
Preference number: 5 (lower is better)
Translates to: SWMFSSSSMMYGCFR*RLMDKMSNTSTKRT
Trigger: TGTCCTCTTAGTGCTGGTGTTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS-3UTR CAA 90 bp ATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAGCCAGTTCTTTGCATaGCTCATTCTACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: MAEKSHPCQNTLDSKPSHSQFFA*LILPEV
Trigger: GACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCT...GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACATCCCATGTCCTTGGCTaGGATAATCACTTCGTAGTA +
Preference number: 5 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTSHVLG*DNHFVV
Trigger: TACTACGAAGTGATTATCCAAGCCAAGGACATGGGA...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGGTCACATCTGGGTCCTaGGCAGAAATGATCTGTATG +
Preference number: 5 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWVTSGS*AEMICM
Trigger: CATACAGATCATTTCTGCCAAGGACCCAGATGTGAC...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCATATCTGATTGAGTTGTaGGTCACATCTGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPYLIEL*VTSGSL
Trigger: CAAGGACCCAGATGTGACCAACAACTCAATCAGATA...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp CCAGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAACCAACCTGGGAGGGATaGTTCATTTCCATAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PEPFCGGKVTKALANGREPTWEG*FISIAR
Trigger: CCTTGCTATGGAAATGAACAATCCCTCCCAGGTTGG...TTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AGAGCCTTTCTGTGGTGGAAAAGTGACAAAGGCCTTAGCGAATGGCAGAGAAAAATTGCGTGGGTCATCTaGGTCCACCGCACTCACTGT +
Preference number: 5 (lower is better)
Translates to: RAFLWWKSDKGLSEWQRKIAWVI*VHRTHC
Trigger: ACAGTGAGTGCGGTGGACCAAGATGACCCACGCAAT...TTTTCTCTGCCATTCGCTAAGGCCTTTGTCACTTTTCCACCACAGAAAGGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCATATTTCATCTCTGCATaGATGCCTTCATCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPYFISA*MPSSKS
Trigger: GGACTTGGATGAAGGCATCAATGCAGAGATGAAATA...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTCTCACTCTCCAGCACAGTATTGCTCGTGTGGTTGGCTGCACCTTGTCCGCGAATACCAACTTGGAAATaGGGATCTGTGCTAATGTCA +
Preference number: 5 (lower is better)
Translates to: FSLSSTVLLVWLAAPCPRIPTWK*GSVLMS
Trigger: TGACATTAGCACAGATCCCAATTTCCAAGTTGGTAT...TCGCGGACAAGGTGCAGCCAACCACACGAGCAATACTGTGCTGGAGAGTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCCCGTGCTGTGTTATCTaGGTTGTCCCTTATGGTAAA +
Preference number: 5 (lower is better)
Translates to: LANGREKPPLSEHLGLQAPCCVI*VVPYGK
Trigger: TTTACCATAAGGGACAACCAAGATAACACAGCACGG...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTCCTTGTCAGAACACCTaGGACTCCAAGCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLPCQNT*DSKPSH
Trigger: GTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGG...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 90 bp CCCAGAAGTACAAGGACATGCCAAGTCCAAGCCAGTTCTTTGCATTaGTCATTCTACCAGAAGTCCACATGGGATTGCCAGGTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PRSTRTCQVQASSLH*SFYQKSTWDCQVFR
Trigger: TCTGAAAACCTGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGTACTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000538374.5
CDS-3UTR CAA 90 bp CCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCGAAGTCCACATGGGATaGCCAGGTTTTCAGAAAATG +
Preference number: 5 (lower is better)
Translates to: PLSEHLGLQAFAHSVRKIEVHMG*PGFQKM
Trigger: CATTTTCTGAAAACCTGGCAATCCCATGTGGACTTC...GATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp TCAGTCTTAACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACTGCCCTCCCATGTCCTaGGCTTGGATAATCACTTCG +
Preference number: 5 (lower is better)
Translates to: SVLTLSQKGYGKFHPSQNCPPMS*AWIITS
Trigger: CGAAGTGATTATCCAAGCCAAGGACATGGGAGGGCA...GTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTTAAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTTGCCCTCCCATGTCCTaGGCTTGGATAATCACTTCG +
Preference number: 5 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLCPPMS*AWIITS
Trigger: CGAAGTGATTATCCAAGCCAAGGACATGGGAGGGCA...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAACGGGGTGGGTTATCATaGACATCTGAGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKRGGLS*TSERVM
Trigger: CATCACCCTCTCAGATGTCAATGATAACCCACCCCG...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCTTCGCACAAGTTATGATACCAACTaGGAAATTGGGATCTGTGCT +
Preference number: 5 (lower is better)
Translates to: WQRKATLVRTPWTPSLRTSYDTN*EIGICA
Trigger: AGCACAGATCCCAATTTCCAAGTTGGTATCATAACT...TGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTATCACAGCTGCACACTaGGATGGTCAGTGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGITAAH*DGQCAC
Trigger: ACAGGCACACTGACCATCCAAGTGTGCAGCTGTGAT...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp GGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAGTTCAGCCACTAAACTaGAGCATAAAGTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: GLSEWQRKATLVRTPWTPVQPLN*SIKSMS
Trigger: AGACATTGACTTTATGCTCAAGTTTAGTGGCTGAAC...TGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp TTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGACTCCAAGCCAGTTATGATACCAACTaGGAAATTGGGATCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LANGREKPPLSEHLGLQASYDTN*EIGICA
Trigger: AGCACAGATCCCAATTTCCAAGTTGGTATCATAACT...GGCTTGGAGTCCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTATCAGCTGTCCTGCCTaGGCGTTCTCACAGACAAAA +
Preference number: 5 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLISCPA*AFSQTK
Trigger: TTTTGTCTGTGAGAACGCCAAGGCAGGACAGCTGAT...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 90 bp ACCTGGGAGGGATTGTTCATTTCCATAGCAAGGACAGTGATATTATaGCAAGAAAATTCTTCCCGGTCTAGGGGTCTTGCTGTCATTAGG +
Preference number: 5 (lower is better)
Translates to: TWEGLFISIARTVIL*QENSSRSRGLAVIR
Trigger: CCTAATGACAGCAAGACCCCTAGACCGGGAAGAATTTTCTTGGCATAATATCACTGTCCTTGCTATGGAAATGAACAATCCCTCCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS-3UTR CAA 90 bp AACCTTGTCTCAAAAGGGTTACGGGAAATTCCATCCATCCCAGAACAAGTAGGTGTCACATCTGGGTCCTaGGCAGAAATGATCTGTATG +
Preference number: 5 (lower is better)
Translates to: NLVSKGLREIPSIPEQVGVTSGS*AEMICM
Trigger: CATACAGATCATTTCTGCCAAGGACCCAGATGTGAC...ACCTACTTGTTCTGGGATGGATGGAATTTCCCGTAACCCTTTTGAGACAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp GACAAAGGCCTTAGCGAATGGCAGAGAAAAGCCACCCTTGTCAGAACACCTTGGTTCACATCTAAGACTTaGATTGTGACAGGAACACTT +
Preference number: 5 (lower is better)
Translates to: DKGLSEWQRKATLVRTPWFTSKT*IVTGTL
Trigger: AAGTGTTCCTGTCACAATCAAAGTCTTAGATGTGAA...CCAAGGTGTTCTGACAAGGGTGGCTTTTCTCTGCCATTCGCTAAGGCCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTGTCGATGATGTATGGTaGTTTCCGGTGCCGCCTCAT +
Preference number: 5 (lower is better)
Translates to: WLSFVASNLHIWHMEETSVDDVW*FPVPPH
Trigger: ATGAGGCGGCACCGGAAACAACCATACATCATCGAC...AGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp GTCAGAACACCTTGGACTCCAAGCCTTCGCACACAGTGTCAGAAAAATCAAAAAAGCCAGTTCTTTGCATaGCTCATTCTACCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: VRTPWTPSLRTQCQKNQKSQFFA*LILPEV
Trigger: GACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCT...TTTTTGATTTTTCTGACACTGTGTGCGAAGGCTTGGAGTCCAAGGTGTTCTGAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGTCCCATGTCCTTGGCTaGGATAATCACTTCGTAGTA +
Preference number: 5 (lower is better)
Translates to: YESRTFCFQLASLYPRPESHVLG*DNHFVV
Trigger: TACTACGAAGTGATTATCCAAGCCAAGGACATGGGA...CTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTGAGTATCTGATTGAGTaGTTGGTCACATCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WLSFVASNLHIWHMEETSEYLIE*LVTSGS
Trigger: GGACCCAGATGTGACCAACAACTCAATCAGATACTC...AGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS-3UTR CAA 90 bp ACAGATACGAGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCCGTGCTGTGTTATCTaGGTTGTCCCTTATGGTAAA +
Preference number: 5 (lower is better)
Translates to: TDTRVELSAFNWHLCIQGPCCVI*VVPYGK
Trigger: TTTACCATAAGGGACAACCAAGATAACACAGCACGG...GCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCTCGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 90 bp TTGCTTTCAAAACTCAGGGGCTTCTTCACAGTTATGATACCAACTTaGAAATTGGGATCTGTGCTAATGTCAAAGGCATCTGCACCATCT +
Preference number: 5 (lower is better)
Translates to: LLSKLRGFFTVMIPT*KLGSVLMSKASAPS
Trigger: AGATGGTGCAGATGCCTTTGACATTAGCACAGATCCCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGCCCCTGAGTTTTGAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS-3UTR CAA 90 bp AGAGTAGAACTTTCTGCTTTCAATTGGCATCTCTGTATCCAAGGCCAGAGCCTTTTCACATCTAAGACTTaGATTGTGACAGGAACACTT +
Preference number: 5 (lower is better)
Translates to: RVELSAFNWHLCIQGQSLFTSKT*IVTGTL
Trigger: AAGTGTTCCTGTCACAATCAAAGTCTTAGATGTGAA...AAGGCTCTGGCCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGTTCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS-3UTR CAA 90 bp TGGCTTTCATTTGTAGCATCTAATCTCCACATTTGGCACATGGAAGAGACATCTACTTTCTGCTTTCAATaGGCATCTCTGTATCCAAGG +
Preference number: 5 (lower is better)
Translates to: WLSFVASNLHIWHMEETSTFCFQ*ASLYPR
Trigger: CCTTGGATACAGAGATGCCAATTGAAAGCAGAAAGT...AGATGTCTCTTCCATGTGCCAAATGTGGAGATTAGATGCTACAAATGAAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 90 bp GATACCAACTTGGAAATTGGGATCTGTGCTAATGTCAAAGGCATCTaGACCATCTCCATCCACAATAGTATATTTCATCTCTGCATTGAT +
Preference number: 5 (lower is better)
Translates to: DTNLEIGICANVKGI*TISIHNSIFHLCID
Trigger: ATCAATGCAGAGATGAAATATACTATTGTGGATGGAGATGGTGCAGATGCCTTTGACATTAGCACAGATCCCAATTTCCAAGTTGGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS GCA 72 bp CGGCGCGAGGCACGGACCAGGGATCGGCCCCGTAGGTaGCTGCGCCTCCCCGGAGCCTGGCTCTCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: RREARTRDRPRR*LRLPGAWLSGP
Trigger: GGGACCAGAGAGCCAGGCTCCGGGGAGGCGCAGGCACCTACGGGGCCGATCCCTGGTCCGTGCCTCGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538374.5
CDS CCA 72 bp CCACCGCGTTCGGCCTGTCCAGTGAGAAGAGCCCCCTaGTCGCGGTCACCGTCCCCCGAGCGTGGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: PPRSACPVRRAP*SRSPSPERGAR
Trigger: CCGCGCGCCACGCTCGGGGGACGGTGACCGCGACCAGGGGGCTCTTCTCACTGGACAGGCCGAACGCGGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 72 bp GGGGTACTGCCAAGTGCACCAACCCCGCCGATGCCCTaGCCTGCCCTCCCGCGGCCACCGCGTTCGGCCTGT +
Preference number: 6 (lower is better)
Translates to: GVLPSAPTPPMP*PALPRPPRSAC
Trigger: ACAGGCCGAACGCGGTGGCCGCGGGAGGGCAGGGCAGGGCATCGGCGGGGTTGGTGCACTTGGCAGTACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 72 bp ACTGCCAAGTGCACCAACCCCGCCGATGCCCTGCCCTaGCCTCCCGCGGCCACCGCGTTCGGCCTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: TAKCTNPADALP*PPAATAFGLSS
Trigger: ACTGGACAGGCCGAACGCGGTGGCCGCGGGAGGGCAGGGCAGGGCATCGGCGGGGTTGGTGCACTTGGCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 72 bp CTAACTGCTCCAGGGCGGGCGTTCTGCTCACGTAGCTaGCTCCCCCACTGGGCGGCTGGTGCCCCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LTAPGRAFCSRS*LPHWAAGAPLG
Trigger: ACCCAGCGGGGCACCAGCCGCCCAGTGGGGGAGGCAGCTACGTGAGCAGAACGCCCGCCCTGGAGCAGTTAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS GCA 72 bp GCACCCGCGGAGAACGTCTGGATTTGGACGCGCGCCTaGCTCCTGGCTTCCGTCACCACAGCGGCGCGGGTC +
Preference number: 6 (lower is better)
Translates to: APAENVWIWTRA*LLASVTTAARV
Trigger: GACCCGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 72 bp CGGAGAACGTCTGGATTTGGACGCGCGCCTGCCTCCTaGCTTCCGTCACCACAGCGGCGCGGGTCCCTCCGA +
Preference number: 6 (lower is better)
Translates to: RRTSGFGRAPAS*LPSPQRRGSLR
Trigger: TCGGAGGGACCCGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CAA 90 bp TTGGCTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCTGGCTTCCGTCACCACAGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: LAAPCPRSTRGERLD*DARLPPGFRHHSGA
Trigger: CGCGCCGCTGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 72 bp AGACCTTCGGTCCTAACTGCTCCAGGGCGGGCGTTCTaGTCACGTAGCTGCCTCCCCCACTGGGCGGCTGGT +
Preference number: 6 (lower is better)
Translates to: RPSVLTAPGRAF*SRSCLPHWAAG
Trigger: ACCAGCCGCCCAGTGGGGGAGGCAGCTACGTGAGCAGAACGCCCGCCCTGGAGCAGTTAGGACCGAAGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS CCA 72 bp CTGCACCTTGTCCGCGAAGCACCCGCGGAGAACGTCTaGATTTGGACGCGCGCCTGCCTCCTGGCTTCCGTC +
Preference number: 6 (lower is better)
Translates to: LHLVREAPAENV*IWTRACLLASV
Trigger: GACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CAA 72 bp CCTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTaGGACGCGCGCCTGCCTCCTGGCTTCCGTCACCAC +
Preference number: 6 (lower is better)
Translates to: PCPRSTRGERLD*DARLPPGFRHH
Trigger: GTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS CCA 72 bp CCCGCCACAGAGCCGTCCCCCTCGAACATATACGTCTaGAGGGAGTCGAAGGGCGGTGCCCACAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: PATEPSPSNIYV*RESKGGAHRSM
Trigger: CATGGACCTGTGGGCACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGAGGGGGACGGCTCTGTGGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp CTTGTCCGCGAAGCACCCGCGGAGAACGTCTGGATTTaGACGCGCGCCTGCCTCCTGGCTTCCGTCACCACA +
Preference number: 6 (lower is better)
Translates to: LVREAPAENVWI*TRACLLASVTT
Trigger: TGTGGTGACGGAAGCCAGGAGGCAGGCGCGCGTCCAAATCCAGACGTTCTCCGCGGGTGCTTCGCGGACAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000536675.2
CDS GCA 72 bp CCTCGTAGAGCTTGGCCAGCACGTAGCTGTGGACAGTaGTGTTCACTGCGCACGTCTGAGGCACGTAGCGGG +
Preference number: 6 (lower is better)
Translates to: PRRAWPARSCGQ*CSLRTSEARSG
Trigger: CCCGCTACGTGCCTCAGACGTGCGCAGTGAACAGCACTGTCCACAGCTACGTGCTGGCCAAGCTCTACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp GCCCCGGCTCAAACTGACTGGGAGCATGTAGGCCTCTaGGCTGCAGGACATGACGTGGCCGTCGTCATCACA +
Preference number: 6 (lower is better)
Translates to: APAQTDWEHVGL*AAGHDVAVVIT
Trigger: TGTGATGACGACGGCCACGTCATGTCCTGCAGCCCAGAGGCCTACATGCTCCCAGTCAGTTTGAGCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS GCA 72 bp CTCGAACATATACGTCTGGAGGGAGTCGAAGGGCGGTaGCCACAGGTCCATGTCGGCCTCGTAGAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: LEHIRLEGVEGR*PQVHVGLVELG
Trigger: GCCAAGCTCTACGAGGCCGACATGGACCTGTGGGCACCGCCCTTCGACTCCCTCCAGACGTATATGTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp GATGTTTCGCAAAGTCTCCGTGCGGTTGCCAGGAGTTaGGGGGTACTGCCAAGTGCACCAACCCCGCCGATG +
Preference number: 6 (lower is better)
Translates to: DVSQSLRAVARS*GVLPSAPTPPM
Trigger: CATCGGCGGGGTTGGTGCACTTGGCAGTACCCCCCAACTCCTGGCAACCGCACGGAGACTTTGCGAAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262717.9
CDS TCA 72 bp ACGGGCTGCCCGCTATCTGCTATCAGGATAGGCAGGTaGAAGACACTCTGCTCCTGCTGCCGGAAACCAGAC +
Preference number: 6 (lower is better)
Translates to: TGCPLSAIRIGR*KTLCSCCRKPD
Trigger: GTCTGGTTTCCGGCAGCAGGAGCAGAGTGTCTTTCACCTGCCTATCCTGATAGCAGATAGCGGGCAGCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS GCA 72 bp CCTCAGGAGCCAAGCTGTAGTAGAAATGCTGACCATTaGGTGGGTCATCTTGGTCCACCGCACTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: PQEPSCSRNADH*VGHLGPPHSLS
Trigger: AGACAGTGAGTGCGGTGGACCAAGATGACCCACGCAATGGTCAGCATTTCTACTACAGCTTGGCTCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp AGACACTCTGCTCCTGCTGCCGGAAACCAGACCTCCTaGTTAGAATCCGTGCTGTGTTATCTTGGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: RHSAPAAGNQTS*LESVLCYLGCP
Trigger: GGGACAACCAAGATAACACAGCACGGATTCTAACCAGGAGGTCTGGTTTCCGGCAGCAGGAGCAGAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS TCA 72 bp GGACGATGTTCTCGTGGATGTTTTCCTCGTCGTCGATaGTGTATGGTTGTTTCCGGTGCCGCCTCATGGACA +
Preference number: 6 (lower is better)
Translates to: GRCSRGCFPRRR*CMVVSGAASWT
Trigger: TGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGAGAACATCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS CCA 72 bp AGGAGCCAAGCTGTAGTAGAAATGCTGACCATTGCGTaGGTCATCTTGGTCCACCGCACTCACTGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: RSQAVVEMLTIA*VILVHRTHCLD
Trigger: ATCCAGACAGTGAGTGCGGTGGACCAAGATGACCCACGCAATGGTCAGCATTTCTACTACAGCTTGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 90 bp GACGATGTTCTCGTGGATGTTTTCCTCGTCGTCGATGATGTATGGTaGTTTCCGGTGCCGCCTCATGGACAAAATGAGCAACACCAGCAC +
Preference number: 6 (lower is better)
Translates to: DDVLVDVFLVVDDVW*FPVPPHGQNEQHQH
Trigger: GTGCTGGTGTTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGAGAACATCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS TCA 72 bp AAAAACTGGTTCCAAACCCAGCTCCTCTTGGTCCGCTaGTGTGACTGTGGCTTGTCTGACAGGAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: KNWFQTQLLLVR*CDCGLSDRSAS
Trigger: AGAAGCACTCCTGTCAGACAAGCCACAGTCACATCAGCGGACCAAGAGGAGCTGGGTTTGGAACCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS TCA 72 bp TGTATGGTTGTTTCCGGTGCCGCCTCATGGACAAAATaGGCAACACCAGCACTAAGAGGACAAAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: CMVVSGAASWTK*ATPALRGQRCR
Trigger: CCTGCATCTTTGTCCTCTTAGTGCTGGTGTTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS GCA 72 bp TTTTCCTCGTCGTCGATGATGTATGGTTGTTTCCGGTaGCGCCTCATGGACAAAATGAGCAACACCAGCACT +
Preference number: 6 (lower is better)
Translates to: FSSSSMMYGCFR*RLMDKMSNTST
Trigger: AGTGCTGGTGTTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS CCA 72 bp GGCCCAAGTTCAGAAAACGCATCTCTAGGTGAGGATTaGCTCCCTCCACCTTTAAGGTGTAGCTTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: GPSSENASLGED*LPPPLRCSFSC
Trigger: GCAAGAAAAGCTACACCTTAAAGGTGGAGGGAGCCAATCCTCACCTAGAGATGCGTTTTCTGAACTTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp GTTCTCGTGGATGTTTTCCTCGTCGTCGATGATGTATaGTTGTTTCCGGTGCCGCCTCATGGACAAAATGAG +
Preference number: 6 (lower is better)
Translates to: VLVDVFLVVDDV*LFPVPPHGQNE
Trigger: CTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS CAA 72 bp CTCGTGGATGTTTTCCTCGTCGTCGATGATGTATGGTaGTTTCCGGTGCCGCCTCATGGACAAAATGAGCAA +
Preference number: 6 (lower is better)
Translates to: LVDVFLVVDDVW*FPVPPHGQNEQ
Trigger: TTGCTCATTTTGTCCATGAGGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAAAACATCCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
ENST00000587582.1
CDS CAA 90 bp CCCCAGAAGTACAAGGACATGCCAAGTCCAAGCCAGTTCTTTGCATaGCTCATTCTACCAGAAGTCCACATGGGATTGCCAGGTTTTCAG +
Preference number: 6 (lower is better)
Translates to: PQKYKDMPSPSQFFA*LILPEVHMGLPGFQ
Trigger: CTGAAAACCTGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGTACTTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000538374.5
CDS TCA 72 bp ACGTCTTCCACACTGATGTGCACTGTTGTTGTGTCCTaGAATGGGCCCAAGTTCAGAAAACGCATCTCTAGG +
Preference number: 6 (lower is better)
Translates to: TSSTLMCTVVVS*NGPKFRKRISR
Trigger: CCTAGAGATGCGTTTTCTGAACTTGGGCCCATTTCAGGACACAACAACAGTGCACATCAGTGTGGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS GCA 72 bp ACAAGGACATGCCAAGTCCAAGCCAGTTCTTTGCATTaGTCATTCTACCAGAAGTCCACATGGGATTGCCAG +
Preference number: 6 (lower is better)
Translates to: TRTCQVQASSLH*SFYQKSTWDCQ
Trigger: CTGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 72 bp TACAAGGACATGCCAAGTCCAAGCCAGTTCTTTGCATaGCTCATTCTACCAGAAGTCCACATGGGATTGCCA +
Preference number: 6 (lower is better)
Translates to: YKDMPSPSQFFA*LILPEVHMGLP
Trigger: TGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS GCA 72 bp GAAGTACAAGGACATGCCAAGTCCAAGCCAGTTCTTTaGATTGCTCATTCTACCAGAAGTCCACATGGGATT +
Preference number: 6 (lower is better)
Translates to: EVQGHAKSKPVL*IAHSTRSPHGI
Trigger: AATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAAGAACTGGCTTGGACTTGGCATGTCCTTGTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 72 bp GAGTATCTGATTGAGTTGTTGGTCACATCTGGGTCCTaGGCAGAAATGATCTGTATGGTTGTTCCAATCGCC +
Preference number: 6 (lower is better)
Translates to: EYLIELLVTSGS*AEMICMVVPIA
Trigger: GGCGATTGGAACAACCATACAGATCATTTCTGCCAAGGACCCAGATGTGACCAACAACTCAATCAGATACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 90 bp ACAATAGTATATTTCATCTCTGCATTGATGCCTTCATCCAAGTCCTaGGCAAACACTCTCCCGACAGTGGAGCTAATTGGAGCTGATTCC +
Preference number: 6 (lower is better)
Translates to: TIVYFISALMPSSKS*ANTLPTVELIGADS
Trigger: GGAATCAGCTCCAATTAGCTCCACTGTCGGGAGAGTGTTTGCCAAGGACTTGGATGAAGGCATCAATGCAGAGATGAAATATACTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 90 bp TCAAAACTCAGGGGCTTCTTCACAGTTATGATACCAACTTGGAAATaGGGATCTGTGCTAATGTCAAAGGCATCTGCACCATCTCCATCC +
Preference number: 6 (lower is better)
Translates to: SKLRGFFTVMIPTWK*GSVLMSKASAPSPS
Trigger: GGATGGAGATGGTGCAGATGCCTTTGACATTAGCACAGATCCCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGCCCCTGAGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 90 bp CTATCAATGGAGTATCTGATTGAGTTGTTGGTCACATCTGGGTCCTaGGCAGAAATGATCTGTATGGTTGTTCCAATCGCCACATCCTCA +
Preference number: 6 (lower is better)
Translates to: LSMEYLIELLVTSGS*AEMICMVVPIATSS
Trigger: TGAGGATGTGGCGATTGGAACAACCATACAGATCATTTCTGCCAAGGACCCAGATGTGACCAACAACTCAATCAGATACTCCATTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 90 bp CTTGCTTTCAAAACTCAGGGGCTTCTTCACAGTTATGATACCAACTaGGAAATTGGGATCTGTGCTAATGTCAAAGGCATCTGCACCATC +
Preference number: 6 (lower is better)
Translates to: LAFKTQGLLHSYDTN*EIGICANVKGICTI
Trigger: GATGGTGCAGATGCCTTTGACATTAGCACAGATCCCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGCCCCTGAGTTTTGAAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 72 bp CCATCTCCATCCACAATAGTATATTTCATCTCTGCATaGATGCCTTCATCCAAGTCCTTGGCAAACACTCTC +
Preference number: 6 (lower is better)
Translates to: PSPSTIVYFISA*MPSSKSLANTL
Trigger: GAGAGTGTTTGCCAAGGACTTGGATGAAGGCATCAATGCAGAGATGAAATATACTATTGTGGATGGAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CCA 72 bp AAACTCAGGGGCTTCTTCACAGTTATGATACCAACTTaGAAATTGGGATCTGTGCTAATGTCAAAGGCATCT +
Preference number: 6 (lower is better)
Translates to: KLRGFFTVMIPT*KLGSVLMSKAS
Trigger: AGATGCCTTTGACATTAGCACAGATCCCAATTTCCAAGTTGGTATCATAACTGTGAAGAAGCCCCTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262717.9
ENST00000536675.2
ENST00000538374.5
CDS CAA 72 bp TTTGCATTGCTCATTCTACCAGAAGTCCACATGGGATaGCCAGGTTTTCAGAAAATGAAGGAGAATGATAAG +
Preference number: 6 (lower is better)
Translates to: FALLILPEVHMG*PGFQKMKENDK
Trigger: CTTATCATTCTCCTTCATTTTCTGAAAACCTGGCAATCCCATGTGGACTTCTGGTAGAATGAGCAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262717.9
ENST00000538374.5