RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170558

Ensembl transcript IDs: ENST00000269141.8, ENST00000399380.7, ENST00000413878.2, ENST00000418492.5, ENST00000430882.6, ENST00000674998.1, ENST00000675173.1, ENST00000675688.1, ENST00000675708.1, ENST00000676041.1, ENST00000676445.1

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATG +
Preference number: 1 (lower is better)
Translates to: PGCGAADRTGYWGSA*MGLSSIRRIPTGLM
Trigger: CATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 90 bp TCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCC +
Preference number: 1 (lower is better)
Translates to: SPMSPGCGAADRTGY*GSAWMGLSSIRRIP
Trigger: GGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR TCA 90 bp CGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAGTGTCAGGCTGCTGCAGCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: RRGWVFHPFVGFPQA*WHQAPQCQAAAAGS
Trigger: TGAGCCAGCTGCAGCAGCCTGACACTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR TCA 90 bp GTGTGGCACCGCCCCCATCTCTCTCTTCCTTGTGCTCCGGTCATGTaGAGTGCTGGCTCCCCCTTCGCCTTCCACCAAGATTGTAAGTTT +
Preference number: 1 (lower is better)
Translates to: VWHRPHLSLPCAPVM*SAGSPFAFHQDCKF
Trigger: AAACTTACAATCTTGGTGGAAGGCGAAGGGGGAGCCAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR CCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTaGCGACAAAGCGCCATTTTGGGAGAGTCCACAGCAGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: NVQGEISFSSEPSMG*RQSAILGESTAGAK
Trigger: CTTTGCTCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR GCA 90 bp TGGTTTAGTGGTGGTAGACCAGAGAGAGGGTGGATTTTCTTCCAATaGTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACG +
Preference number: 1 (lower is better)
Translates to: WFSGGRPERGWIFFQ*CPVGMSWKNNLSDT
Trigger: CGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 90 bp CAAGTCATAGTCCTCTGGTTTAGTGGTGGTAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCCTGGAAAAAC +
Preference number: 1 (lower is better)
Translates to: QVIVLWFSGGRPERG*IFFQCCPVGMSWKN
Trigger: GTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCAGAGGACTATGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAAGCCTCCAGCAAGCACTGTGCTAGT +
Preference number: 1 (lower is better)
Translates to: FSKQYGSLIFPLSPN*FAAYAKASSKHCAS
Trigger: ACTAGCACAGTGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
3UTR GCA 90 bp GCCATTTTGGGAGAGTCCACAGCAGGAGCAAAGGCATCAGAATGCTaGTTTCTCTTGTCAAGATGGAGTATTTCAAATCATCCATACAAA +
Preference number: 1 (lower is better)
Translates to: AILGESTAGAKASEC*FLLSRWSISNHPYK
Trigger: TTTGTATGGATGATTTGAAATACTCCATCTTGACAAGAGAAAGCAGCATTCTGATGCCTTTGCTCCTGCTGTGGACTCTCCCAAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 90 bp CATTTTATTCAGAACGCTGGGGTCAGAGGTGTATCATTTATATTCTaGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: HFIQNAGVRGVSFIF*YTIQRQSCCQKSLQ
Trigger: CTGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGTTCTGAATAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
3UTR TCA 90 bp TATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTaGAGTTCAGTCATCACCTCCACCATACATGTCAGCAAGTTTCTT +
Preference number: 1 (lower is better)
Translates to: YQLKLFVLVQKPSSP*SSVITSTIHVSKFL
Trigger: AAGAAACTTGCTGACATGTATGGTGGAGGTGATGACTGAACTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp GGGTGTGGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTGAACCATCTATGGGCTaGCGACAAAGCGCCATTTTG +
Preference number: 2 (lower is better)
Translates to: GCGAADRTGYWGSAWMGLEPSMG*RQSAIL
Trigger: CAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTC...AAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CAA 90 bp TCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACAGTGTCAGGCTGCTGCAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: SAWMGLSSIRRIPTG*MASGSTVSGCCSWL
Trigger: GAGCCAGCTGCAGCAGCCTGACACTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR GCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGTTGGTTTGCAGCCTATaGCAAAGCCTCCAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRLVCSL*QSLQQA
Trigger: TGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAA...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR GCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR GCA 90 bp TCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGGGATTTAGTCCCCTaGACTTTGGGAGGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: SALALNHLWAGDKAPFWERDLVP*TLGGQG
Trigger: GCCTTGGCCTCCCAAAGTGCAGGGGACTAAATCCCT...CTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGACAAAGCGCCATTTTaGGAGAGTCCACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMDKAPF*ESPQQE
Trigger: CTCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTC...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGC +
Preference number: 2 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSRPERG*IFFQCC
Trigger: GCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCT...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTCAAGTCATAGTCCTCTaGTTTAGTGGTGGTAGACCA +
Preference number: 2 (lower is better)
Translates to: PLLEELRELKDPAVEPLPQVIVL*FSGGRP
Trigger: TGGTCTACCACCACTAAACCAGAGGACTATGACTTG...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCCCTGTGGGAATGTCCTaGAAAAACAATCTGTCCGAT +
Preference number: 2 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSPVGMS*KNNLSD
Trigger: ATCGGACAGATTGTTTTTCCAGGACATTCCCACAGG...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp CAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATTTGTTTGAAAATGTGTaGCACCGCCCCCATCTCTCT +
Preference number: 2 (lower is better)
Translates to: QRGSRHMFTWLPFCCPRDLFENV*HRPHLS
Trigger: AGAGAGATGGGGGCGGTGCCACACATTTTCAAACAA...ATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR-3UTR CCA 90 bp CAGGAAACTTCTAGTTATAGAGGAAAGCAAAGGGGAAGCAGACACATGTTCACAGGTCATGTGAAGTGCTaGCTCCCCCTTCGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: QETSSYRGKQRGSRHMFTGHVKC*LPLRLP
Trigger: TGGAAGGCGAAGGGGGAGCCAGCACTTCACATGACC...TGTGAACATGTGTCTGCTTCCCCTTTGCTTTCCTCTATAACTAGAAGTTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR-3UTR TCA 90 bp GGAAAGCGAGGTAGGTATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTAGAAAAGGCCCTCAATaGTGCAACAGATGTGAAAGT +
Preference number: 2 (lower is better)
Translates to: GKRGRYRDFEPARVGCTFRKGPQ*CNRCES
Trigger: ACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCT...AAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATACCTACCTCGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGTTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKAFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR GCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
3UTR-3UTR GCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAACACATAAAATCCCAGTaGTTCTGTACTGTAAAATTC +
Preference number: 2 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQHIKSQ*FCTVKF
Trigger: GAATTTTACAGTACAGAAGCACTGGGATTTTATGTG...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CCA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 2 (lower is better)
Translates to: YLRNISEKALNDATDVKVPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGTAACAAAAGCGTGTTaGAGCATATCATGGTTTAAC +
Preference number: 2 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKVTKAC*SISWFN
Trigger: GTTAAACCATGATATGCTTCAACACGCTTTTGTTAC...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
3UTR-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 2 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
3UTR-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTAAAGCCTAGCTTCTaGATGCTTTTTGGGAATATC +
Preference number: 2 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVLKPSF*MLFGNI
Trigger: GATATTCCCAAAAAGCATTCAGAAGCTAGGCTTTAA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
3UTR-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATTAAAGCCTAGCTTCTaGATGCTTTTTGGGAATATC +
Preference number: 2 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFALKPSF*MLFGNI
Trigger: GATATTCCCAAAAAGCATTCAGAAGCTAGGCTTTAA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
3UTR-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTAAAGCCTAGCTTCTaGATGCTTTTTGGGAATATC +
Preference number: 2 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLKPSF*MLFGNI
Trigger: GATATTCCCAAAAAGCATTCAGAAGCTAGGCTTTAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
3UTR-3UTR GCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACACATAAAATCCCAGTaGTTCTGTACTGTAAAATTC +
Preference number: 2 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQHIKSQ*FCTVKF
Trigger: GAATTTTACAGTACAGAAGCACTGGGATTTTATGTG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
3UTR-3UTR GCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAAAAACTCCCTTTATTTaGAACCAGCTGAGTAAGTTT +
Preference number: 2 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQKTPFI*NQLSKF
Trigger: AAACTTACTCAGCTGGTTGCAAATAAAGGGAGTTTT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
3UTR-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
3UTR CCA 72 bp GGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATTCGTCGGATTCCCACA +
Preference number: 3 (lower is better)
Translates to: GAADRTGYWGSA*MGLSSIRRIPT
Trigger: TGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp TCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGT +
Preference number: 3 (lower is better)
Translates to: SPGCGAADRTGY*GSAWMGLSSIR
Trigger: ACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR TCA 72 bp CGCCCCCATCTCTCTCTTCCTTGTGCTCCGGTCATGTaGAGTGCTGGCTCCCCCTTCGCCTTCCACCAAGAT +
Preference number: 3 (lower is better)
Translates to: RPHLSLPCAPVM*SAGSPFAFHQD
Trigger: ATCTTGGTGGAAGGCGAAGGGGGAGCCAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR GCA 72 bp AAATGTGTGGCACCGCCCCCATCTCTCTCTTCCTTGTaGTCCGGTCATGTGAAGTGCTGGCTCCCCCTTCGC +
Preference number: 3 (lower is better)
Translates to: KCVAPPPSLSSL*SGHVKCWLPLR
Trigger: GCGAAGGGGGAGCCAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR CCA 72 bp CTGCAGATCGGACCGGATACTGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTCGGATTCCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: LQIGPDTGARRG*VFHPFVGFPQA
Trigger: AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CAA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 3 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR TCA 72 bp TGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAGTGTCAGGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: WVFHPFVGFPQA*WHQAPQCQAAA
Trigger: TGCAGCAGCCTGACACTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp CTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTaGGAGAGTCCACAGCAGGAGCAAAGGCATCAGAAT +
Preference number: 3 (lower is better)
Translates to: LNHLWAGDKAPF*ESPQQEQRHQN
Trigger: ATTCTGATGCCTTTGCTCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp GGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTaGCGACAAAGCGCCATTTTGGGAGAGTCCACAGCA +
Preference number: 3 (lower is better)
Translates to: GEISFSSEPSMG*RQSAILGESTA
Trigger: TGCTGTGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp GTCCTCTGGTTTAGTGGTGGTAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCC +
Preference number: 3 (lower is better)
Translates to: VLWFSGGRPERG*IFFQCCPVGMS
Trigger: GGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp TTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATaGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: FRGKSALALNHL*AGDKAPFWESP
Trigger: TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp GTGAGTTCTTGTGAGATCTGCTTGTTTGAAAATGTGTaGCACCGCCCCCATCTCTCTCTTCCTTGTGCTCCG +
Preference number: 3 (lower is better)
Translates to: VSSCEICLFENV*HRPHLSLPCAP
Trigger: CGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGAACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR TCA 72 bp GTTCAGGTAATCATAGTCCTGCTCACCACCACTACTTaGGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGA +
Preference number: 3 (lower is better)
Translates to: VQVIIVLLTTTT*GIKGAQGPSSG
Trigger: TCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGTGAGCAGGACTATGATTACCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CCA 72 bp CAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAAGCCTCCAGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: QYGSLIFPLSPN*FAAYAKASSKH
Trigger: GTGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
3UTR CCA 72 bp AGAGGAAAGCAAAGGGGAAGCAGACACATGTTCACATaGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: RGKQRGSRHMFT*LPFCCPRDSEF
Trigger: GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTGCTTTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
3UTR-3UTR CAA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGAAAAACACCTTGATCTaGCACAAATGTGCTCCATTT +
Preference number: 3 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILKNTLI*HKCAPF
Trigger: AAATGGAGCACATTTGTGCAAGATCAAGGTGTTTTT...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR-3UTR CAA 90 bp CAGGAAACTTCTAGTTATAGAGGAAAGCAAAGGGGAAGCAGACACATGTTCACATCTTGTGAGATCTGCTaGTTTGAAAATGTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: QETSSYRGKQRGSRHMFTSCEIC*FENVWH
Trigger: GTGCCACACATTTTCAAACAAGCAGATCTCACAAGA...TGTGAACATGTGTCTGCTTCCCCTTTGCTTTCCTCTATAACTAGAAGTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp GGGTGTGGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTGCTCTGAACCATCTATaGGCTGGCGACAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GCGAADRTGYWGSAWMGLALNHL*AGDKAP
Trigger: TGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGC...AAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TGTGGCACCGCCCCCATCTCTCTCTTCCTTGTGCTCCGGTCATGTGAAGTGCTGGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: CGTAPISLFLVLRSCEVLDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...CAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: TGARRGWVFHPFVGFPQAGVLGA*DTILYL
Trigger: GAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCC...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp CGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTAGGGATTTAGTCCCCTaGACTTTGGGAGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RTGYWGSAWMGLSSIRRIRDLVP*TLGGQG
Trigger: GCCTTGGCCTCCCAAAGTGCAGGGGACTAAATCCCT...AATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TGTGGCACCGCCCCCATCTCTCTCTTCCTTGTGCTCCGGTCATGTGAAGTGCTGCTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CGTAPISLFLVLRSCEVLLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...CAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGARRGWVFHPFVGFPQACKHVG*RGAWSL
Trigger: CAGGCTCCAAGCACCCCTTCACCCAACATGTTTACA...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp GGGTGTGGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTAATTTTACTGCCACTTaGCACTTTTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GCGAADRTGYWGSAWMGLNFTAT*HFSWVS
Trigger: AGAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATT...AAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGTCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRSCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: PLLEELRELKDPAVEPLPGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CAGTCTCAAGTTCTTCAGGCTGTAGAGGCTTCTGCTTCTGGGGAGGCCTCAGGAGGTCATGTGAAGTGCTaGCTCCCCCTTCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QSQVLQAVEASASGEASGGHVKC*LPLRLP
Trigger: TGGAAGGCGAAGGGGGAGCCAGCACTTCACATGACC...TCCTGAGGCCTCCCCAGAAGCAGAAGCCTCTACAGCCTGAAGAACTTGAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp TCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGAAGCCAAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SKGRHDRCIAEIMVPTKPRAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...TGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKARAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp GGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCACAGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GLSSIRRIPTGLMASGSTGFPQA*WHQAPQ
Trigger: CTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCC...TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCCCCGTCGTTGCTGTTTaGGTCGGTCTGGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSPVVAV*VGLDGE
Trigger: TTCGCCATCCAGACCGACCCAAACAGCAACGACGGG...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGTCAAGGACCCAGCAGTaGAGCCACTGCCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILSRTQQ*SHCLHS
Trigger: ACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGA...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CAA 72 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACAGTGTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MGLSSIRRIPTG*MASGSTVSGCC
Trigger: GCAGCAGCCTGACACTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp GTGAGTTCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VSSCEICLFENVWHRPHLRAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...GAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGAACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp AGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTCTCCAGGGTGTGGGGCTaGAGATCGGACCGGATACTG +
Preference number: 4 (lower is better)
Translates to: SRHMFTWLPFCCPRDSEFSRVWG*RSDRIL
Trigger: CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGA...GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGCTCCTCTTAGGTGTGTaGAATGTGATGCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRLLLGV*NVMRKA
Trigger: CGCTTTCCGCATCACATTGCACACACCTAAGAGGAG...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: TGARRGWVFHPFVGFPQAPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGGGCCACTGTGCTTACTaGATTGTCTTGGGAACACTA +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRGHCAY*IVLGTL
Trigger: TAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCC...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp GGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCACAATCCTGACAAGCTCTTaGGGAAAAGGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLSSIRRIPTGLMASGSTILTSS*GKGPLE
Trigger: CTCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGAT...TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp AGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTCGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SRHMFTWLPFCCPRDSEFGFPQA*WHQAPQ
Trigger: CTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCC...GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCATGTCAGCAAGTTTCTTaGACCGTGGCCCCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPCQQVS*TVAPSR
Trigger: ACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACA...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGAAACCAAGTTCACCCTaGAGTTCAGTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILKPSSP*SSVITS
Trigger: GGAGGTGATGACTGAACTTCAGGGTGAACTTGGTTT...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLEELRELKDPAVEPLPEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGTCCCCTGGAGTTTTCTaGCAAGTTGATTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILSPGVF*QVDWRD
Trigger: ATCCCTCCAATCAACTTGCCAGAAAACTCCAGGGGA...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GGAAAGCGAGGTAGGTATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTAGGCTGGTCAGCTCCTaGCCCAGTTACACTGTACCG +
Preference number: 4 (lower is better)
Translates to: GKRGRYRDFEPARVGCTFRLVSS*PSYTVP
Trigger: CGGTACAGTGTAACTGGGCCAGGAGCTGACCAGCCT...AAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATACCTACCTCGCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGGTCCCATTCCAAACCTaGTGTAAGAACTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRVPFQT*CKNSGL
Trigger: CAGACCTGAGTTCTTACACCAGGTTTGGAATGGGAC...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTTTGAAAGGCCATATGTaGGATTGCCTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RTGYWGSAWMGLSSIRRILKGHM*DCLPCL
Trigger: CAGACATGGAAGGCAATCCCACATATGGCCTTTCAA...AATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: SCEICLFENVWHRPHLSLNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp AATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGATACTGCAGAAAGACTCTGTCTaGTCTTCTTCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NEVPNVSRVWGCRSDRILQKDSV*SSSPPP
Trigger: AGGTGGAGGAGAAGAAGACCAGACAGAGTCTTTCTG...CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CAA 72 bp TCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTaGGGAGAGTCCACAGCAGGAGCAAAGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: SEPSMGWRQSAI*GESTAGAKASE
Trigger: TTCTGATGCCTTTGCTCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCAACCTCAACATCCCATTaGGGGCATTGGGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPTSTSH*GHWDRQ
Trigger: CTGACGATCCCAATGCCCTCAATGGGATGTTGAGGT...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp GGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCACAATCTGTCCGATACGCTaGTGGAAAAGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLSSIRRIPTGLMASGSTICPIR*WKSSSS
Trigger: AGAGGAGGAGCTTTTCCATCAGCGTATCGGACAGAT...TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAACTGTTTGGGTCGGTCTaGATGGCGAACCGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMELFGSV*MANRPV
Trigger: TACTGGACGGTTCGCCATCCAGACCGACCCAAACAG...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TGTAGAGGCTTCTGCTTCTGGGGAGGCCTCAGGAAACTTCTAGTTATAGAGGAAGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: CRGFCFWGGLRKLLVIEEGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...TTCCTCTATAACTAGAAGTTTCCTGAGGCCTCCCCAGAAGCAGAAGCCTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LLTLALFSDVMWFILIRSDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp ACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: TLALFSDVMWFILIRSKGNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...GCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGGACAAAGCGCCATTTTaGGAGAGTCCACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKADKAPF*ESPQQE
Trigger: CTCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTC...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLEELRELKDPAVEPLPRPERG*IFFQCC
Trigger: GCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCT...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGTCCCAGATATTTATTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRSQIFI*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAATAAATATCTGGGA...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAAGGCCGTGGCTGTGTTTaGAAGGCCATATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMEGRGCV*KAICGI
Trigger: AATCCCACATATGGCCTTTCAAACACAGCCACGGCC...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGAAGCCACTGGGTCCTGAGCAGTaGATGTTGTCAACATGGTAC +
Preference number: 4 (lower is better)
Translates to: SKGRHDRCIAEIMVPTKPLGPEQ*MLSTWY
Trigger: GTACCATGTTGACAACATTCACTGCTCAGGACCCAG...TGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCACTGGGTCCTGAGCAGTaGATGTTGTCAACATGGTAC +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPLGPEQ*MLSTWY
Trigger: GTACCATGTTGACAACATTCACTGCTCAGGACCCAG...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: YSLGPKAGMIDALLRSWCGFPQA*WHQAPQ
Trigger: CTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCC...GCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTATCGTCAGCATCAATTaGTGTTACGGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: TGARRGWVFHPFVGFPQAIVSIN*CYGHHI
Trigger: TATGTGATGACCGTAACAGCAATTGATGCTGACGAT...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp TTCTGGGGAGGCCTCAGGAAACTTCTAGTTATAGAGGAAAGCAAAGGGGAAGCATCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FWGGLRKLLVIEESKGEASCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...TGCTTCCCCTTTGCTTTCCTCTATAACTAGAAGTTTCCTGAGGCCTCCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTCCAGGGTGTGGGGCTaGAGATCGGACCGGATACTG +
Preference number: 4 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWSRVWG*RSDRIL
Trigger: CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGA...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SCEICLFENVWHRPHLSLPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGATACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: LGPKAGMIDALLRSWCPRYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...TCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp GTGAGTTCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: VSSCEICLFENVWHRPHLYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...GAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGAACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCTCGAACCCGCCAGAGTaGGATGTACATTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSSNPPE*DVHLVY
Trigger: ATACACCAAATGTACATCCCACTCTGGCGGGTTCGA...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTCCTGTGGGAATGTCCTaGAAAAACAATCTGTCCGAT +
Preference number: 4 (lower is better)
Translates to: PLLEELRELKDPAVEPLPPVGMS*KNNLSD
Trigger: ATCGGACAGATTGTTTTTCCAGGACATTCCCACAGG...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
3UTR CAA 72 bp GCTGTCCTCGCGATAGTGAGTTCTTGTGAGATCTGCTaGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: AVLAIVSSCEIC*FENVWHRPHLS
Trigger: AGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGAACTCACTATCGCGAGGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTTAAAGCCTAGCTTCTaGATGCTTTTTGGGAATATC +
Preference number: 4 (lower is better)
Translates to: TGARRGWVFHPFVGFPQALKPSF*MLFGNI
Trigger: GATATTCCCAAAAAGCATTCAGAAGCTAGGCTTTAA...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp CAGTCTCAAGTTCTTCAGGCTGTAGAGGCTTCTGCTTCTGGGGAGGCCTCAGGACAGAACTTGTTGACTTaGAGGCCATGGTATATTAGC +
Preference number: 4 (lower is better)
Translates to: QSQVLQAVEASASGEASGQNLLT*RPWYIS
Trigger: GCTAATATACCATGGCCTTCAAGTCAACAAGTTCTG...TCCTGAGGCCTCCCCAGAAGCAGAAGCCTCTACAGCCTGAAGAACTTGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp ACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCTCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TLALFSDVMWFILIRSKGSCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...GCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp CAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATCGGAAGCCAAACAGATaGCAGCATTATGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRGSRHMFTWLPFCCPRDRKPNR*QHYASC
Trigger: ACAGGAAGCATAATGCTGGCATCTGTTTGGCTTCCG...ATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCCTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp ACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: TLALFSDVMWFILIRSKGPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...GCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAATACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFADRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAACCATCTATGGGCTaGCGACAAAGCGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMEPSMG*RQSAIL
Trigger: CAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTC...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKGVLGA*DTILYL
Trigger: GAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCC...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGTATCGATCTGGGTCCTaGGCAGTGAATGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMYRSGS*AVNVVN
Trigger: GTTGACAACATTCACTGCTCAGGACCCAGATCGATA...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFARAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGATCAGGAACTTGGCATaGTCAGAAGAGAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKAIRNLA*SEESGK
Trigger: CTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGAT...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGTGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMCRWPL*LLNCLG
Trigger: CCCAAGACAATTCAGTAAGCACAGTGGCCACCTACA...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCAGGGTGTGGGGCTaGAGATCGGACCGGATACTG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASRVWG*RSDRIL
Trigger: CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAATTGGTTTGCAGCCTATaGCAAAGCCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQLVCSL*QSLQQA
Trigger: TGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAA...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp TTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGAGGCAGGCATGATAGATaGATTGCTGAGATCATGGTG +
Preference number: 4 (lower is better)
Translates to: LGPKAGMIDALLRSWCPRGRHDR*IAEIMV
Trigger: CACCATGATCTCAGCAATGCATCTATCATGCCTGCC...TCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCAATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPMLRRE*KASHGI
Trigger: TATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCAT...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAACCCGTCGTTGCTGTTTaGGTCGGTCTGGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKPVVAV*VGLDGE
Trigger: TTCGCCATCCAGACCGACCCAAACAGCAACGACGGG...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCACTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGGTGTATCACAAACTCTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: YRDFEPARVGCTFGVSQTLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...AGTTTGTGATACACCAAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GGAAAGCGAGGTAGGTATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: GKRGRYRDFEPARVGCTFKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...AAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATACCTACCTCGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp CTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: LFSDVMWFILIRSKGRHDGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...ATCATGCCTGCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFANVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp CAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGACACATGTTCACATaGCTCCCTTTTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QRGSRHMFTWLPFCCPRDRHMFT*LPFCCP
Trigger: AGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCT...ATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVGVLGA*DTILYL
Trigger: GAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAGVLGA*DTILYL
Trigger: GAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LLTLALFSDVMWFILIRSNMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp TATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGGTGTATCACAAACTAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: YRDFEPARVGCTFGVSQTNMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...AGTTTGTGATACACCAAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCAGTTTTTCACATTTGGTaGTTCTCGGTCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPVFHIW*FSVQNS
Trigger: GCTGTTTTGGACCGAGAATCACCAAATGTGAAAAAC...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCACAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAACTCACCACCACTACTTaGGGAATTAAGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQLTTTT*GIKGAQ
Trigger: TTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGTGAG...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAATGTCAGCAAGTTTCTTaGACCGTGGCCCCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKCQQVS*TVAPSR
Trigger: ACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACA...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGTCTCCCTTGTAGCTaGCGGTGTACCCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAGLPCS*RCTRSD
Trigger: ATCAGAGCGGGTACACCGTCAGCTACAAGGGAGACC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTCCAGGGTGTGGGGCTaGAGATCGGACCGGATACTG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFSRVWG*RSDRIL
Trigger: CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAATTTTCTTCCAATGCTaGCCTGTGGGAATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQIFFQC*PVGMSW
Trigger: CCAGGACATTCCCACAGGGCAGCATTGGAAGAAAAT...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGCTGGTCAGCTCCTaGCCCAGTTACACTGTACCG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCRLVSS*PSYTVP
Trigger: CGGTACAGTGTAACTGGGCCAGGAGCTGACCAGCCT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKIPVGG*SAPGPV
Trigger: AACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTAT...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACCCGTCGTTGCTGTTTaGGTCGGTCTGGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAPVVAV*VGLDGE
Trigger: TTCGCCATCCAGACCGACCCAAACAGCAACGACGGG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCCCGTCGTTGCTGTTTaGGTCGGTCTGGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCPVVAV*VGLDGE
Trigger: TTCGCCATCCAGACCGACCCAAACAGCAACGACGGG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGACTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: LGPKAGMIDALLRSWCPRLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...TCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGAAATGGTCCAGCATTTaGATCAATGTCATAATCAAG +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRKWSSI*INVIIK
Trigger: CTTGATTATGACATTGATCCAAATGCTGGACCATTT...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKAPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SCEICLFENVWHRPHLSLKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCGATCGGACCGGATACTaGGGCTCGGCGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLDRTGY*GSAWMG
Trigger: ACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATC...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGTTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCAGCATTGCTGAGATCATaGTGCCCACGAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSALLRS*CPRSQG
Trigger: ACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGC...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGCAAGTCATAGTCCTCTaGTTTAGTGGTGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMQVIVL*FSGGRP
Trigger: TGGTCTACCACCACTAAACCAGAGGACTATGACTTG...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKNMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp GGAAAGCAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: GKQRGSRHMFTWLPFCCPQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...AGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLRAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAGAGCAGGATGGCAATaGTGGCACCGGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRAGWQ*WHRCQA
Trigger: GGCTTGGCACCGGTGCCATCATTGCCATCCTGCTCT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGFPQA*WHQAPQ
Trigger: CTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGTCAGCAAGTTTCTTaGACCGTGGCCCCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCCQQVS*TVAPSR
Trigger: ACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTCAGCAAGTTTCTTaGACCGTGGCCCCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVCQQVS*TVAPSR
Trigger: ACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGCTTAGAGTCCCCCTaGGGCATTATCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFACLESP*GIIRVS
Trigger: GGAGACCCTGATAATGCCTCAGGGGGACTCTAAGCA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGTTGGGTGAAGGGGTaGTTGGAGCCTGAGACACGA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCCWVKG*LEPETR
Trigger: TCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGTTGGGTGAAGGGGTaGTTGGAGCCTGAGACACGA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFACWVKG*LEPETR
Trigger: TCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTTGGGTGAAGGGGTaGTTGGAGCCTGAGACACGA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVCWVKG*LEPETR
Trigger: TCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGTGGCACTTGATTTTCTaGAGCAACAGTAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKAWHLIF*SNSKDK
Trigger: TTTGTCCTTACTGTTGCTGCAGAAAATCAAGTGCCA...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp AGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTCCAGATGCCAGCATTATaGTTCCTGTACAACCTCATT +
Preference number: 4 (lower is better)
Translates to: SRHMFTWLPFCCPRDSEFQMPAL*FLYNLI
Trigger: AATGAGGTTGTACAGGAAGCATAATGCTGGCATCTG...GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAGGCTGGTCAGCTCCTaGCCCAGTTACACTGTACCG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFRLVSS*PSYTVP
Trigger: CGGTACAGTGTAACTGGGCCAGGAGCTGACCAGCCT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVIPVGG*SAPGPV
Trigger: AACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTAT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAIPVGG*SAPGPV
Trigger: AACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAAGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMEGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp CAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: QRGSRHMFTWLPFCCPRDQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...ATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGGGCTCGGCGTGGATaGGTCTTTCATCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGARRG*VFHPFV
Trigger: GACGAATGGATGAAAGACCCATCCACGCCGAGCCCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAATGTCTCCAGGGTGTaGGGCTGCAGATCGGACCGG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKNVSRV*GCRSDR
Trigger: CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAATCAAGGACCCAGCAGTaGAGCCACTGCCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKSRTQQ*SHCLHS
Trigger: ACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGA...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATCCTGACAAGCTCTTaGGGAAAAGGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAILTSS*GKGPLE
Trigger: CTCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCTGACAAGCTCTTaGGGAAAAGGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCILTSS*GKGPLE
Trigger: CTCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAATACACTGTACCGCAGTaGAAGGTTTTTATCTCTATC +
Preference number: 4 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMEYTVPQ*KVFISI
Trigger: GATAGAGATAAAAACCTTTCACTGCGGTACAGTGTA...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAACCTCAACATCCCATTaGGGGCATTGGGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFATSTSH*GHWDRQ
Trigger: CTGACGATCCCAATGCCCTCAATGGGATGTTGAGGT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACCTCAACATCCCATTaGGGGCATTGGGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCTSTSH*GHWDRQ
Trigger: CTGACGATCCCAATGCCCTCAATGGGATGTTGAGGT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVCKHVG*RGAWSL
Trigger: CAGGCTCCAAGCACCCCTTCACCCAACATGTTTACA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFACKHVG*RGAWSL
Trigger: CAGGCTCCAAGCACCCCTTCACCCAACATGTTTACA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGGCCGTGGCTGTGTTTaGAAGGCCATATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCGRGCV*KAICGI
Trigger: AATCCCACATATGGCCTTTCAAACACAGCCACGGCC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFANMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCTATCGATCTGGGTCCTaGGCAGTGAATGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: WFILIRSKGRHDRCIAEIYRSGS*AVNVVN
Trigger: GTTGACAACATTCACTGCTCAGGACCCAGATCGATA...GATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGGATTCCCACAGGCTTaGTGGCATCAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKGFPQA*WHQAPQ
Trigger: CTGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp CAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATATTGAAGAGCTTATTTaGGATCCATGTGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: QRGSRHMFTWLPFCCPRDIEELI*DPCEQS
Trigger: AGACTGTTCACATGGATCTCAAATAAGCTCTTCAAT...ATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp ACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCCCTGGCACTCTTCTCTaGTGTAATGTGGTTCATACT +
Preference number: 4 (lower is better)
Translates to: TLALFSDVMWFILIRSKGPGTLL*CNVVHT
Trigger: AGTATGAACCACATTACATCAGAGAAGAGTGCCAGG...GCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAATCCACCTTAAAATCTaGAGGCTCACTGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQIHLKI*RLTALI
Trigger: TATGAGAGCAGTGAGCCTGCAGATTTTAAGGTGGAT...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTACCCAGTCTCTCTTCTaGCTTTGTAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVTQSLF*LCRWPL
Trigger: CAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACCCAGTCTCTCTTCTaGCTTTGTAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCTQSLF*LCRWPL
Trigger: CAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAACCCAGTCTCTCTTCTaGCTTTGTAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFATQSLF*LCRWPL
Trigger: CAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATGTTGGGTGAAGGGGTaGTTGGAGCCTGAGACACGA +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPCWVKG*LEPETR
Trigger: TCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR GCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATCCAGGGTGTGGGGCTaGAGATCGGACCGGATACTG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQSRVWG*RSDRIL
Trigger: CAGTATCCGGTCCGATCTGCAGCCCCACACCCTGGA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAGGCTGGTCAGCTCCTaGCCCAGTTACACTGTACCG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRLVSS*PSYTVP
Trigger: CGGTACAGTGTAACTGGGCCAGGAGCTGACCAGCCT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFIPVGG*SAPGPV
Trigger: AACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: YLRNISEKALNDATDVKVIPVGG*SAPGPV
Trigger: AACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTAT...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCACTGCGTTCCAGGCTaGTGTATGGGGTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCHCVPG*CMGLIL
Trigger: AAGGATCAACCCCATACACCAGCCTGGAACGCAGTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACACTGCGTTCCAGGCTaGTGTATGGGGTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAHCVPG*CMGLIL
Trigger: AAGGATCAACCCCATACACCAGCCTGGAACGCAGTG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTGTTTGGGTCGGTCTaGATGGCGAACCGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLFGSV*MANRPV
Trigger: TACTGGACGGTTCGCCATCCAGACCGACCCAAACAG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCCCGTCGTTGCTGTTTaGGTCGGTCTGGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKPVVAV*VGLDGE
Trigger: TTCGCCATCCAGACCGACCCAAACAGCAACGACGGG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCEICLFENVWHRPHLSLPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCCTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCAAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCAAGGACCCAGCAGTaGAGCCACTGCCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSRTQQ*SHCLHS
Trigger: ACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCATCCTGACAAGCTCTTaGGGAAAAGGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVILTSS*GKGPLE
Trigger: CTCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGAT...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATATGTTCCAGGCTTTaGTCCCTCAGGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAICSRL*SLRNCP
Trigger: GGGACAGTTCCTGAGGGATCAAAGCCTGGAACATAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTACCTCAACATCCCATTaGGGGCATTGGGATCGTCAG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFTSTSH*GHWDRQ
Trigger: CTGACGATCCCAATGCCCTCAATGGGATGTTGAGGT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPCKHVG*RGAWSL
Trigger: CAGGCTCCAAGCACCCCTTCACCCAACATGTTTACA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFCKHVG*RGAWSL
Trigger: CAGGCTCCAAGCACCCCTTCACCCAACATGTTTACA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCGGCCGTGGCTGTGTTTaGAAGGCCATATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVGRGCV*KAICGI
Trigger: AATCCCACATATGGCCTTTCAAACACAGCCACGGCC...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGCCGTGGCTGTGTTTaGAAGGCCATATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGRGCV*KAICGI
Trigger: AATCCCACATATGGCCTTTCAAACACAGCCACGGCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAATATCGATCTGGGTCCTaGGCAGTGAATGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKYRSGS*AVNVVN
Trigger: GTTGACAACATTCACTGCTCAGGACCCAGATCGATA...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAATGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMECCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTGTCAGCAAGTTTCTTaGACCGTGGCCCCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKCQQVS*TVAPSR
Trigger: ACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAAAACCAAGTTCACCCTaGAGTTCAGTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKKPSSP*SSVITS
Trigger: GGAGGTGATGACTGAACTTCAGGGTGAACTTGGTTT...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp AGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTCTATTTGAGATCCATGTaGACAGTCTCAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SRHMFTWLPFCCPRDSEFYLRSM*TVSSSS
Trigger: TGAAGAACTTGAGACTGTTCACATGGATCTCAAATA...GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTACCCAGTCTCTCTTCTaGCTTTGTAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFTQSLF*LCRWPL
Trigger: CAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCATATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LALNHLWAGDKAPFWESPYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCTGTCCACATCTGTaGAGTCCCCGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLSCPHL*SPRWSH
Trigger: GTGACTCCAACGGGGACTGCACAGATGTGGACAGGA...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGCATGGTTTAACTTACTaGTCCCACCACAAAATATTT +
Preference number: 4 (lower is better)
Translates to: SALALNHLWAGDKAPFWEHGLTY*SHHKIF
Trigger: AAATATTTTGTGGTGGGAGCAGTAAGTTAAACCATG...CTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGGTGTATCACAAACTTTCTGCCTTTGTAGGTaGCCACTGTGCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: YRDFEPARVGCTFGVSQTFCLCR*PLCLLN
Trigger: ATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAA...AGTTTGTGATACACCAAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAATGAAGATACCAGTTaGAGGCTGGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNEDTS*RLVSSW
Trigger: CCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAATGAAGATACCAGTTaGAGGCTGGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFANEDTS*RLVSSW
Trigger: CCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCCACTGCGTTCCAGGCTaGTGTATGGGGTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: YLRNISEKALNDATDVKVHCVPG*CMGLIL
Trigger: AAGGATCAACCCCATACACCAGCCTGGAACGCAGTG...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCTGTTTGGGTCGGTCTaGATGGCGAACCGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLFGSV*MANRPV
Trigger: TACTGGACGGTTCGCCATCCAGACCGACCCAAACAG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKPLESH*QTFTRR
Trigger: CCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTACTGGGGCTCGGCGTaGATGGGTCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVYWGSA*MGLSSI
Trigger: AATGGATGAAAGACCCATCCACGCCGAGCCCCAGTA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp CAGGAAACTTCTAGTTATAGAGGAAAGCAAAGGGGAAGCAGACACATGTTCACATTGTTTGAAAATGTGTaGCACCGCCCCCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: QETSSYRGKQRGSRHMFTLFENV*HRPHLS
Trigger: AGAGAGATGGGGGCGGTGCCACACATTTTCAAACAA...TGTGAACATGTGTCTGCTTCCCCTTTGCTTTCCTCTATAACTAGAAGTTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGCCACTGTGCTTACTaGATTGTCTTGGGAACACTA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAGHCAY*IVLGTL
Trigger: TAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATATGTTCCAGGCTTTaGTCCCTCAGGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFICSRL*SLRNCP
Trigger: GGGACAGTTCCTGAGGGATCAAAGCCTGGAACATAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAACATGGTACCGGCATaGAGCCCTTCTTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKNMVPA*SPSSWR
Trigger: TCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTGGGTCCTGAGCAGTaGATGTTGTCAACATGGTAC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLGPEQ*MLSTWY
Trigger: GTACCATGTTGACAACATTCACTGCTCAGGACCCAG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATATCGATCTGGGTCCTaGGCAGTGAATGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAYRSGS*AVNVVN
Trigger: GTTGACAACATTCACTGCTCAGGACCCAGATCGATA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCAGTTTTTCACATTTGGTaGTTCTCGGTCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSVFHIW*FSVQNS
Trigger: GCTGTTTTGGACCGAGAATCACCAAATGTGAAAAAC...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCTCACCACCACTACTTaGGGAATTAAGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVLTTTT*GIKGAQ
Trigger: TTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGTGAG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTCACCACCACTACTTaGGGAATTAAGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFALTTTT*GIKGAQ
Trigger: TTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGTGAG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAACCAAGTTCACCCTaGAGTTCAGTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCKPSSP*SSVITS
Trigger: GGAGGTGATGACTGAACTTCAGGGTGAACTTGGTTT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTTTTATCAGAACTTGTTaGCTTGAAGGCCATGGTATA +
Preference number: 4 (lower is better)
Translates to: SCEICLFENVWHRPHLSLFIRTC*LEGHGI
Trigger: TATACCATGGCCTTCAAGTCAACAAGTTCTGATAAA...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR GCA 90 bp TATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGGTGTATCACAAACTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: YRDFEPARVGCTFGVSQTQEIQS*IMRFHQ
Trigger: CTGGTGAAATCGCATTATGCAAGACTGGATTTCCTG...AGTTTGTGATACACCAAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVCRWPL*LLNCLG
Trigger: CCCAAGACAATTCAGTAAGCACAGTGGCCACCTACA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCCRWPL*LLNCLG
Trigger: CCCAAGACAATTCAGTAAGCACAGTGGCCACCTACA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGACCCAGTCTCTCTTCTaGCTTTGTAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKTQSLF*LCRWPL
Trigger: CAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTACTGATTCTGTACACTaGGTTCCAGGCTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVTDSVH*VPGWCM
Trigger: CATACACCAGCCTGGAACGCAGTGTACAGAATCAGT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTGATTCTGTACACTaGGTTCCAGGCTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCTDSVH*VPGWCM
Trigger: CATACACCAGCCTGGAACGCAGTGTACAGAATCAGT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAACTGATTCTGTACACTaGGTTCCAGGCTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFATDSVH*VPGWCM
Trigger: CATACACCAGCCTGGAACGCAGTGTACAGAATCAGT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACAGCAGTGGAGCCACTaGCTTCATAGTCAAACACTA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAQQWSH*LHSQTL
Trigger: TAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCAGCAGTGGAGCCACTaGCTTCATAGTCAAACACTA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVQQWSH*LHSQTL
Trigger: TAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCAGCAGTGGAGCCACTaGCTTCATAGTCAAACACTA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCQQWSH*LHSQTL
Trigger: TAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTTGGTTTGCAGCCTATaGCAAAGCCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVLVCSL*QSLQQA
Trigger: TGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTGGTTTGCAGCCTATaGCAAAGCCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLVCSL*QSLQQA
Trigger: TGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTCCCCTGGAGTTTTCTaGCAAGTTGATTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCSPGVF*QVDWRD
Trigger: ATCCCTCCAATCAACTTGCCAGAAAACTCCAGGGGA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCCCCTGGAGTTTTCTaGCAAGTTGATTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSPGVF*QVDWRD
Trigger: ATCCCTCCAATCAACTTGCCAGAAAACTCCAGGGGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCCCTGGAGTTTTCTaGCAAGTTGATTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASPGVF*QVDWRD
Trigger: ATCCCTCCAATCAACTTGCCAGAAAACTCCAGGGGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAATGAAGATACCAGTTaGAGGCTGGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFNEDTS*RLVSSW
Trigger: CCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCAATGAAGATACCAGTTaGAGGCTGGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLRNISEKALNDATDVKVNEDTS*RLVSSW
Trigger: CCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATT...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGTCCCATTCCAAACCTaGTGTAAGAACTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVVPFQT*CKNSGL
Trigger: CAGACCTGAGTTCTTACACCAGGTTTGGAATGGGAC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGTCCCATTCCAAACCTaGTGTAAGAACTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAVPFQT*CKNSGL
Trigger: CAGACCTGAGTTCTTACACCAGGTTTGGAATGGGAC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCACTGCGTTCCAGGCTaGTGTATGGGGTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKHCVPG*CMGLIL
Trigger: AAGGATCAACCCCATACACCAGCCTGGAACGCAGTG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LLTLALFSDVMWFILIRSGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAACTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp AATGTTCAGGGGGAAATCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAATGGAAATATTTGATTTaGGAGGATTACCCGAATCTG +
Preference number: 4 (lower is better)
Translates to: NVQGEISFSSEPSMGWRQWKYLI*EDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCA...TTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGATTTCCCCCTGAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACTGTGCAGTCCCCGTTaGAGTCACACTGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQLCSPR*SHTGKP
Trigger: AGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCAGGCCACTGTGCTTACTaGATTGTCTTGGGAACACTA +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPGHCAY*IVLGTL
Trigger: TAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCC...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGCCACTGTGCTTACTaGATTGTCTTGGGAACACTA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGHCAY*IVLGTL
Trigger: TAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAATCCTGACAAGCTCTTaGGGAAAAGGTCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQILTSS*GKGPLE
Trigger: CTCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGAT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR TCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCATATGTTCCAGGCTTTaGTCCCTCAGGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLICSRL*SLRNCP
Trigger: GGGACAGTTCCTGAGGGATCAAAGCCTGGAACATAT...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGATATGTTCCAGGCTTTaGTCCCTCAGGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKICSRL*SLRNCP
Trigger: GGGACAGTTCCTGAGGGATCAAAGCCTGGAACATAT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTATCGATCTGGGTCCTaGGCAGTGAATGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFYRSGS*AVNVVN
Trigger: GTTGACAACATTCACTGCTCAGGACCCAGATCGATA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp CTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: LFSDVMWFILIRSKGRHDQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...ATCATGCCTGCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTCACCACCACTACTTaGGGAATTAAGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLTTTT*GIKGAQ
Trigger: TTGAGCTCCCTTAATTCCTCAAGTAGTGGTGGTGAG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAACAGGAAATCCAGTCTTaGATAATGCGATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKQEIQS*IMRFHQ
Trigger: CTGGTGAAATCGCATTATGCAAGACTGGATTTCCTG...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATCAGGAACTTGGCATaGTCAGAAGAGAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAIRNLA*SEESGK
Trigger: CTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCAGGAACTTGGCATaGTCAGAAGAGAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCIRNLA*SEESGK
Trigger: CTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFCRWPL*LLNCLG
Trigger: CCCAAGACAATTCAGTAAGCACAGTGGCCACCTACA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTTGGTTTGCAGCCTATaGCAAAGCCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLVCSL*QSLQQA
Trigger: TGCTTGCTGGAGGCTTTGGCATAGGCTGCAAACCAA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVMLRRE*KASHGI
Trigger: TATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCAT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCMLRRE*KASHGI
Trigger: TATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTTCTGCCTTTGTAGGTaGCCACTGTGCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCFCLCR*PLCLLN
Trigger: ATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTCTGCCTTTGTAGGTaGCCACTGTGCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVFCLCR*PLCLLN
Trigger: ATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATTCTGCCTTTGTAGGTaGCCACTGTGCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAFCLCR*PLCLLN
Trigger: ATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATCCCCTGGAGTTTTCTaGCAAGTTGATTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPSPGVF*QVDWRD
Trigger: ATCCCTCCAATCAACTTGCCAGAAAACTCCAGGGGA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAATGAAGATACCAGTTaGAGGCTGGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKNEDTS*RLVSSW
Trigger: CCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTTGAAAGGCCATATGTaGGATTGCCTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCLKGHM*DCLPCL
Trigger: CAGACATGGAAGGCAATCCCACATATGGCCTTTCAA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATTGAAAGGCCATATGTaGGATTGCCTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFALKGHM*DCLPCL
Trigger: CAGACATGGAAGGCAATCCCACATATGGCCTTTCAA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFKSCLA*RSLSRR
Trigger: ACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCCTCTGAGCCCAAATTaGTTTGCAGCCTATGCCAAA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFPLSPN*FAAYAK
Trigger: TTTGGCATAGGCTGCAAACCAATTTGGGCTCAGAGG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCTCCAATGCTGCCCTGTaGGAATGTCCTGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YLRNISEKALNDATDVKVSNAAL*ECPGKT
Trigger: TGTTTTTCCAGGACATTCCCACAGGGCAGCATTGGA...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CCA 90 bp TACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCTTCTCTGATGTAATGTaGTTCATACTCATTAGGTCC +
Preference number: 4 (lower is better)
Translates to: YSLGPKAGMIDALLRSWCFSDVM*FILIRS
Trigger: GGACCTAATGAGTATGAACCACATTACATCAGAGAA...GCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGGCCACTGTGCTTACTaGATTGTCTTGGGAACACTA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKGHCAY*IVLGTL
Trigger: TAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACTGGGTCCTGAGCAGTaGATGTTGTCAACATGGTAC +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQLGPEQ*MLSTWY
Trigger: GTACCATGTTGACAACATTCACTGCTCAGGACCCAG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGTTTTTCACATTTGGTaGTTCTCGGTCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVVFHIW*FSVQNS
Trigger: GCTGTTTTGGACCGAGAATCACCAAATGTGAAAAAC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGTTTTTCACATTTGGTaGTTCTCGGTCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCVFHIW*FSVQNS
Trigger: GCTGTTTTGGACCGAGAATCACCAAATGTGAAAAAC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCTGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: WFILIRSKGRHDRCIAEICCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...GATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAAACCAAGTTCACCCTaGAGTTCAGTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKKPSSP*SSVITS
Trigger: GGAGGTGATGACTGAACTTCAGGGTGAACTTGGTTT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCATGCTGCAATATTGCTaGAAATGCAAGTACATAGGT +
Preference number: 4 (lower is better)
Translates to: LLTLALFSDVMWFILIRSMLQYC*KCKYIG
Trigger: ACCTATGTACTTGCATTTTCAGCAATATTGCAGCAT...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCQEIQS*IMRFHQ
Trigger: CTGGTGAAATCGCATTATGCAAGACTGGATTTCCTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVQEIQS*IMRFHQ
Trigger: CTGGTGAAATCGCATTATGCAAGACTGGATTTCCTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAGAGGCTGTCCTTCATaGACATCCTTCGATAAGACT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFRGCPS*TSFDKT
Trigger: AGTCTTATCGAAGGATGTGCATGAAGGACAGCCTCT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATCCACCTTAAAATCTaGAGGCTCACTGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAIHLKI*RLTALI
Trigger: TATGAGAGCAGTGAGCCTGCAGATTTTAAGGTGGAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAATTTTACTGCCACTTaGCACTTTTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNFTAT*HFSWVS
Trigger: AGAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGACTGATTCTGTACACTaGGTTCCAGGCTGGTGTATG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKTDSVH*VPGWCM
Trigger: CATACACCAGCCTGGAACGCAGTGTACAGAATCAGT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp CTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATTGGCACTTGATTTTCTaGAGCAACAGTAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LFSDVMWFILIRSKGRHDWHLIF*SNSKDK
Trigger: TTTGTCCTTACTGTTGCTGCAGAAAATCAAGTGCCA...ATCATGCCTGCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp TACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCGTGTATCTAATATTTTaGTGCATATATCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: YSLGPKAGMIDALLRSWCVYLIF*CIYRSG
Trigger: CCCAGATCGATATATGCAGCAAAATATTAGATACAC...GCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR GCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAGAGCCCAAATTGGTTTaGAGCCTATGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQEPKLV*SLCQSL
Trigger: GAGGCTTTGGCATAGGCTGCAAACCAATTTGGGCTC...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGTACCCGCTCTGATGTaGAGGATAAAAGAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAVPALM*RIKESS
Trigger: ACTACTTTCTTTTATCCTGCACATCAGAGCGGGTAC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR CCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCAATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPMLRRE*KASHGI
Trigger: TATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCAT...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTTCTGCCTTTGTAGGTaGCCACTGTGCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVFCLCR*PLCLLN
Trigger: ATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCGTCCCATTCCAAACCTaGTGTAAGAACTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLVPFQT*CKNSGL
Trigger: CAGACCTGAGTTCTTACACCAGGTTTGGAATGGGAC...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTGAAAGGCCATATGTaGGATTGCCTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLKGHM*DCLPCL
Trigger: CAGACATGGAAGGCAATCCCACATATGGCCTTTCAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGAAATATTTGATTTaGGAGGATTACCCGAATCTG +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSWKYLI*EDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCA...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATACACTGTACCGCAGTaGAAGGTTTTTATCTCTATC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAYTVPQ*KVFISI
Trigger: GATAGAGATAAAAACCTTTCACTGCGGTACAGTGTA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGA +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVQDGNI*FGRITR
Trigger: TCGGGTAATCCTCCCAAATCAAATATTTCCATCCTG...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAATTAAAGCCTAGCTTCTaGATGCTTTTTGGGAATATC +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKLKPSF*MLFGNI
Trigger: GATATTCCCAAAAAGCATTCAGAAGCTAGGCTTTAA...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGTGTTTCAAAGCATTaGGAAGAGGCTGTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFCVSKH*EEAVLH
Trigger: ATGAAGGACAGCCTCTTCTCAATGCTTTGAAACACA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATCTGCAGGCTCACTaGTCTCATATTGTACTTTTC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCNLQAH*SHIVLF
Trigger: GAAAAGTACAATATGAGAGCAGTGAGCCTGCAGATT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAATCTGCAGGCTCACTaGTCTCATATTGTACTTTTC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNLQAH*SHIVLF
Trigger: GAAAAGTACAATATGAGAGCAGTGAGCCTGCAGATT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATCCACCTTAAAATCTaGAGGCTCACTGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFIHLKI*RLTALI
Trigger: TATGAGAGCAGTGAGCCTGCAGATTTTAAGGTGGAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAATTTTACTGCCACTTaGCACTTTTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFNFTAT*HFSWVS
Trigger: AGAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQCRWPL*LLNCLG
Trigger: CCCAAGACAATTCAGTAAGCACAGTGGCCACCTACA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTATCGTCAGCATCAATTaGTGTTACGGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVIVSIN*CYGHHI
Trigger: TATGTGATGACCGTAACAGCAATTGATGCTGACGAT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCGTCAGCATCAATTaGTGTTACGGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCIVSIN*CYGHHI
Trigger: TATGTGATGACCGTAACAGCAATTGATGCTGACGAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGGCACTTGATTTTCTaGAGCAACAGTAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCWHLIF*SNSKDK
Trigger: TTTGTCCTTACTGTTGCTGCAGAAAATCAAGTGCCA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCCATATATCAGGAACTTaGCATGCTCAGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVHISGT*HAQKRV
Trigger: CACTCTCTTCTGAGCATGCCAAGTTCCTGATATATG...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGTGCTGAATTCCCTTaGCTAATGGCACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGAEFP*LMALDF
Trigger: AAAATCAAGTGCCATTAGCCAAGGGAATTCAGCACC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCTGCATATATCGATCTaGGTCCTGAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLHISI*VLSSEC
Trigger: ACATTCACTGCTCAGGACCCAGATCGATATATGCAG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGAAATGGTCCAGCATTTaGATCAATGTCATAATCAAG +
Preference number: 4 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWKWSSI*INVIIK
Trigger: CTTGATTATGACATTGATCCAAATGCTGGACCATTT...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATACACTGTACCGCAGTaGAAGGTTTTTATCTCTATC +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPYTVPQ*KVFISI
Trigger: GATAGAGATAAAAACCTTTCACTGCGGTACAGTGTA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTACACTGTACCGCAGTaGAAGGTTTTTATCTCTATC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFYTVPQ*KVFISI
Trigger: GATAGAGATAAAAACCTTTCACTGCGGTACAGTGTA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGTTTTTCACATTTGGTaGTTCTCGGTCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKVFHIW*FSVQNS
Trigger: GCTGTTTTGGACCGAGAATCACCAAATGTGAAAAAC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCCCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVCCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGTAACAAAAGCGTGTTaGAGCATATCATGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCVTKAC*SISWFN
Trigger: GTTAAACCATGATATGCTTCAACACGCTTTTGTTAC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTACATACACATGTTCTaGAGTTTCTGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVYIHMF*SFCTSP
Trigger: TGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCTTTAATTTCTCAGTaGAGATACACACATAACGCC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASLISQ*RYTHNA
Trigger: GGCGTTATGTGTGTATCTTCACTGAGAAATTAAAGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399380.7
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGATCCACCTTAAAATCTaGAGGCTCACTGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKIHLKI*RLTALI
Trigger: TATGAGAGCAGTGAGCCTGCAGATTTTAAGGTGGAT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAATTTTACTGCCACTTaGCACTTTTCCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKNFTAT*HFSWVS
Trigger: AGAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATCGTCAGCATCAATTaGTGTTACGGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFIVSIN*CYGHHI
Trigger: TATGTGATGACCGTAACAGCAATTGATGCTGACGAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGGCACTTGATTTTCTaGAGCAACAGTAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFWHLIF*SNSKDK
Trigger: TTTGTCCTTACTGTTGCTGCAGAAAATCAAGTGCCA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAACATGGTTTAACTTACTaGTCCCACCACAAAATATTT +
Preference number: 4 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKHGLTY*SHHKIF
Trigger: AAATATTTTGTGGTGGGAGCAGTAAGTTAAACCATG...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATTGAAAGGCCATATGTaGGATTGCCTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQLKGHM*DCLPCL
Trigger: CAGACATGGAAGGCAATCCCACATATGGCCTTTCAA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFQLKVV*PGVLYP
Trigger: GGGATAAAGAACGCCAGGCCAAACAACTTTTAATTG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTTTATTCAGAACGCTaGGGTCAGAGGTGTATCATT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFFYSER*GQRCII
Trigger: AATGATACACCTCTGACCCCAGCGTTCTGAATAAAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFCCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTAACAAAAGCGTGTTaGAGCATATCATGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFVTKAC*SISWFN
Trigger: GTTAAACCATGATATGCTTCAACACGCTTTTGTTAC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTACATACACATGTTCTaGAGTTTCTGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKYIHMF*SFCTSP
Trigger: TGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTCCATTAATATCTACTaGATGTGCCCTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCSINIY*MCPQMK
Trigger: TTTCATTTGAGGGCACATGCAGTAGATATTAATGGA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCATTAATATCTACTaGATGTGCCCTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASINIY*MCPQMK
Trigger: TTTCATTTGAGGGCACATGCAGTAGATATTAATGGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCCATTAATATCTACTaGATGTGCCCTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSINIY*MCPQMK
Trigger: TTTCATTTGAGGGCACATGCAGTAGATATTAATGGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGATCGTCAGCATCAATTaGTGTTACGGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKIVSIN*CYGHHI
Trigger: TATGTGATGACCGTAACAGCAATTGATGCTGACGAT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTGGCACTTGATTTTCTaGAGCAACAGTAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKWHLIF*SNSKDK
Trigger: TTTGTCCTTACTGTTGCTGCAGAAAATCAAGTGCCA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGTGTATCTAATATTTTaGTGCATATATCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVVYLIF*CIYRSG
Trigger: CCCAGATCGATATATGCAGCAAAATATTAGATACAC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGTGTATCTAATATTTTaGTGCATATATCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAVYLIF*CIYRSG
Trigger: CCCAGATCGATATATGCAGCAAAATATTAGATACAC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACACATAAAATCCCAGTaGTTCTGTACTGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAHIKSQ*FCTVKF
Trigger: GAATTTTACAGTACAGAAGCACTGGGATTTTATGTG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCACATAAAATCCCAGTaGTTCTGTACTGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVHIKSQ*FCTVKF
Trigger: GAATTTTACAGTACAGAAGCACTGGGATTTTATGTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCATGGTTTAACTTACTaGTCCCACCACAAAATATTT +
Preference number: 4 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCHGLTY*SHHKIF
Trigger: AAATATTTTGTGGTGGGAGCAGTAAGTTAAACCATG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAAAACTCCCTTTATTTaGAACCAGCTGAGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAKTPFI*NQLSKF
Trigger: AAACTTACTCAGCTGGTTGCAAATAAAGGGAGTTTT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAAATGGTCCAGCATTTaGATCAATGTCATAATCAAG +
Preference number: 4 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAKWSSI*INVIIK
Trigger: CTTGATTATGACATTGATCCAAATGCTGGACCATTT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTGGAAATATTTGATTTaGGAGGATTACCCGAATCTG +
Preference number: 4 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVWKYLI*EDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACCTTCACACGCAGGATaGAAATATTTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQPSHAG*KYLIWE
Trigger: CTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTCCATTAATATCTACTaGATGTGCCCTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFSINIY*MCPQMK
Trigger: TTTCATTTGAGGGCACATGCAGTAGATATTAATGGA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTGTATCTAATATTTTaGTGCATATATCGATCTGGG +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFVYLIF*CIYRSG
Trigger: CCCAGATCGATATATGCAGCAAAATATTAGATACAC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCATGGTTTAACTTACTaGTCCCACCACAAAATATTT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFHGLTY*SHHKIF
Trigger: AAATATTTTGTGGTGGGAGCAGTAAGTTAAACCATG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTGGAAATATTTGATTTaGGAGGATTACCCGAATCTG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKWKYLI*EDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR TCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATGCTGTAATATTAATTaGATTGGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQCCNIN*IGVWSF
Trigger: GAAACTCCAGACCCCAATTCAATTAATATTACAGCA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR TCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAGTAACAAAAGCGTGTTaGAGCATATCATGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQVTKAC*SISWFN
Trigger: GTTAAACCATGATATGCTTCAACACGCTTTTGTTAC...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTCCATTAATATCTACTaGATGTGCCCTCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKSINIY*MCPQMK
Trigger: TTTCATTTGAGGGCACATGCAGTAGATATTAATGGA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR GCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTATCTAATATTTTGCTaGATATATCGATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKYLIFC*IYRSGS
Trigger: GGACCCAGATCGATATATGCAGCAAAATATTAGATA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAAATGGTCCAGCATTTaGATCAATGTCATAATCAAG +
Preference number: 4 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKKWSSI*INVIIK
Trigger: CTTGATTATGACATTGATCCAAATGCTGGACCATTT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CCA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATGGAAATATTTGATTTaGGAGGATTACCCGAATCTG +
Preference number: 4 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQWKYLI*EDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CCA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTTTTTCCAAACAGTATaGATCACTGATATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLFFQTV*ITDIPS
Trigger: AGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS TCA 90 bp ATCTCATTTTCCATGCTGGGAGCTCACAGATTCCCTGCAGCAATCTaGAGCAGGGCCGCCAGCAGCGGCAGCAGGGTCCGCAGCGCTCCC +
Preference number: 5 (lower is better)
Translates to: ISFSMLGAHRFPAAI*SRAASSGSRVRSAP
Trigger: GGGAGCGCTGCGGACCCTGCTGCCGCTGCTGGCGGCCCTGCTTCAGATTGCTGCAGGGAATCTGTGAGCTCCCAGCATGGAAAATGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS-3UTR CAA 90 bp GGGTGTGGGGCTGCAGATCGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTGGCTGGTGTATGGGGTaGATCCTTATCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: GCGAADRTGYWGSAWMGLGWCMG*ILIGHS
Trigger: ACTGTGACCGATAAGGATCAACCCCATACACCAGCC...AAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCGATCTGCAGCCCCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTACCCGTCGTTGCTGTTaGGGTCGGTCTGGATGGCGA +
Preference number: 5 (lower is better)
Translates to: TGARRGWVFHPFVGFPQATRRCC*GRSGWR
Trigger: TCGCCATCCAGACCGACCCAAACAGCAACGACGGGT...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCCGCGATCCAGGGGCTTaGTCACCGACAGCTGACCCG +
Preference number: 5 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSRDPGA*SPTADP
Trigger: CGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCG...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp CGGACCGGATACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTTGGGTGAAGGGGTGCTaGGAGCCTGAGACACGATTC +
Preference number: 5 (lower is better)
Translates to: RTGYWGSAWMGLSSIRRIWVKGC*EPETRF
Trigger: GAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCA...AATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGTATCCGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS TCA 90 bp AACCGGGCTATCTGCTCGCGATCCAGGGGCTTTGTCACCGACAGCTaGCCCGAGATGGGGTTGATAATGAAGATACCAGTTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: NRAICSRSRGFVTDS*PEMGLIMKIPVGGW
Trigger: CCAGCCTCCAACTGGTATCTTCATTATCAACCCCATCTCGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCGAGCAGATAGCCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 90 bp GGTTTGACCACGGTGACTAACCCGTCGTTGCTGTTTGGGTCGGTCTaGATGGCGAACCGTCCAGTAGGATCTCCGCCACTGATTCTGTAC +
Preference number: 5 (lower is better)
Translates to: GLTTVTNPSLLFGSV*MANRPVGSPPLILY
Trigger: GTACAGAATCAGTGGCGGAGATCCTACTGGACGGTTCGCCATCCAGACCGACCCAAACAGCAACGACGGGTTAGTCACCGTGGTCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 90 bp AGAAGCCTCTACAGACGCCTGAAGCCTGCATTTGAAAGAATAATCTaGGCAGCTGGTGCCCAACCCTGTCCCCTACTCCGCCCATCTGGG +
Preference number: 5 (lower is better)
Translates to: RSLYRRLKPAFERII*AAGAQPCPLLRPSG
Trigger: CCCAGATGGGCGGAGTAGGGGACAGGGTTGGGCACCAGCTGCTCAGATTATTCTTTCAAATGCAGGCTTCAGGCGTCTGTAGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS-3UTR CAA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTACCTCAACATCCCATaGAGGGCATTGGGATCGTCA +
Preference number: 5 (lower is better)
Translates to: TGARRGWVFHPFVGFPQAYLNIP*RALGSS
Trigger: TGACGATCCCAATGCCCTCAATGGGATGTTGAGGTA...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: SALALNHLWAGDKAPFWESVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...CTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp GGAAAGCGAGGTAGGTATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GKRGRYRDFEPARVGCTFVTNPS*LFGSVW
Trigger: CCAGACCGACCCAAACAGCAACGACGGGTTAGTCAC...AAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATACCTACCTCGCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp AGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTCGCGATAGTGAGTTCTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: SRHMFTWLPFCCPRDSEFSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...GAACTCACTATCGCGAGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CAA 90 bp TGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGAACGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: CCPVGMSWKNNLSDTLMERIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...TTCCATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS TCA 90 bp ACTCCGCCCATCTGGGAGTCACAGGTCCACAGAAAAGAAGCTTGGTaGTCTCATTTTCCATGCTGGGAGCTCACAGATTCCCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TPPIWESQVHRKEAW*SHFPCWELTDSLQQ
Trigger: TTGCTGCAGGGAATCTGTGAGCTCCCAGCATGGAAAATGAGATCACCAAGCTTCTTTTCTGTGGACCTGTGACTCCCAGATGGGCGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS-3UTR CAA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCAGATCCTGACAAGCTCTaGAGGAAAAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LALNHLWAGDKAPFWESPDPDKL*RKRSPG
Trigger: TCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGATC...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS GCA 90 bp TTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTaGCCACGAAGCCAAGGTCATAGGTGTAAGCTCTCTATGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGPKAGMIDALLRSW*PRSQGHRCKLSMGQ
Trigger: CTGGCCCATAGAGAGCTTACACCTATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS CCA 90 bp CCCACAATCCTGTCCACATCTGTGCAGTCCCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGGATGGAAATATTTGATTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PTILSTSVQSPLESH*QTFTRRMEIFDLGG
Trigger: TCCTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGATGTGGACAGGATTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCATCAAAGTCGATTGGTTaGACCACGGTGACTAACCCG +
Preference number: 5 (lower is better)
Translates to: LALNHLWAGDKAPFWESPSKSIG*TTVTNP
Trigger: CGGGTTAGTCACCGTGGTCAAACCAATCGACTTTGA...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp ACTGGGGCTCGGCGTGGATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: TGARRGWVFHPFVGFPQASIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...AGCCTGTGGGAATCCGACGAATGGATGAAAGACCCATCCACGCCGAGCCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS CCA 90 bp TCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATaGTGCCCACGAAGCCAAGGTCATAGGTGTAAGCTCTCTATGGGC +
Preference number: 5 (lower is better)
Translates to: SLGPKAGMIDALLRS*CPRSQGHRCKLSMG
Trigger: GCCCATAGAGAGCTTACACCTATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp CCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: PLLEELRELKDPAVEPLPTPQLR*ASGSIL
Trigger: TAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGT...AGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCTCAAGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCGCGATCCAGGGGCTTaGTCACCGACAGCTGACCCG +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFRDPGA*SPTADP
Trigger: CGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTGGCACCGCCCCCATCTCTCTCTTCCTTGTGCTCCGGTCATGTGAAGTGCTGATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: CGTAPISLFLVLRSCEVLMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...CAGCACTTCACATGACCGGAGCACAAGGAAGAGAGAGATGGGGGCGGTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CAA 90 bp GGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCACAGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: GLSSIRRIPTGLMASGSTAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: LLTLALFSDVMWFILIRSRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS TCA 90 bp CCGCCACTGATTCTGTACACTGCGTTCCAGGCTGGTGTATGGGGTTaGTCCTTATCGGTCACAGTTAGATTAGCTACTATGATGTCTACC +
Preference number: 5 (lower is better)
Translates to: PPLILYTAFQAGVWG*SLSVTVRLATMMST
Trigger: GGTAGACATCATAGTAGCTAATCTAACTGTGACCGATAAGGATCAACCCCATACACCAGCCTGGAACGCAGTGTACAGAATCAGTGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 90 bp CCTTCGATAAGACTGCACTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAGAAGCCTCTACAGACGCTCGCGCGC +
Preference number: 5 (lower is better)
Translates to: PSIRLHCKHLQEIQS*IMRFHQKPLQTLAR
Trigger: GCGCGCGAGCGTCTGTAGAGGCTTCTGGTGAAATCGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGTGCAGTCTTATCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676445.1
CDS GCA 90 bp TGGTTTAGTGGTGGTAGACCAGAGAGAGGGTGGATTTTCTTCCAATaGTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: WFSGGRPERGWIFFQ*CPVGMSWKNNLSAF
Trigger: GAAAGCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CCA 90 bp GCCACTTTTCCTGGGTCTCTTTGTCTTGGGCATATATCAGGAACTTaGCATGCTCAGAAGAGAGTGGAAAGCTTCTCACGGCATACACCA +
Preference number: 5 (lower is better)
Translates to: ATFPGSLCLGHISGT*HAQKRVESFSRHTP
Trigger: TGGTGTATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCCCAAGACAAAGAGACCCAGGAAAAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 90 bp AAGTTTGCTGACCTCTGGTTTAGTGGTGGTAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: KFADLWFSGGRPERG*IFFQCCPVGMSWKN
Trigger: GTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCAGAGGTCAGCAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS-3UTR CAA 90 bp TCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGTTTTCCTGGGTCTCTTaGTCTTGGGCATATATCAGG +
Preference number: 5 (lower is better)
Translates to: SALALNHLWAGDKAPFWEFSWVS*SWAYIR
Trigger: CCTGATATATGCCCAAGACAAAGAGACCCAGGAAAA...CTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCGCGATCCAGGGGCTTaGTCACCGACAGCTGACCCG +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRDPGA*SPTADP
Trigger: CGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp CTCATTAATGAAGTCCCCAATGTCTCCAGGGTGTGGGGCTGCAGATCGGACCGGAATGGGGTTCTCCACTaGATTTCCATTAATATCTAC +
Preference number: 5 (lower is better)
Translates to: LINEVPNVSRVWGCRSDRNGVLH*ISINIY
Trigger: GTAGATATTAATGGAAATCAAGTGGAGAACCCCATT...CCGGTCCGATCTGCAGCCCCACACCCTGGAGACATTGGGGACTTCATTAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGTTGATTGTAAACATGTaGGGTGAAGGGGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKALIVNM*GEGVLG
Trigger: TCCAAGCACCCCTTCACCCAACATGTTTACAATCAA...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAACCCGTCGTTGCTGTTaGGGTCGGTCTGGATGGCGA +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFATRRCC*GRSGWR
Trigger: TCGCCATCCAGACCGACCCAAACAGCAACGACGGGT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGAAGCCAGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: SKGRHDRCIAEIMVPTKPAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...TGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp CAGGAAACTTCTAGTTATAGAGGAAAGCAAAGGGGAAGCAGACACATGTTCACACGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: QETSSYRGKQRGSRHMFTRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...TGTGAACATGTGTCTGCTTCCCCTTTGCTTTCCTCTATAACTAGAAGTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS TCA 90 bp TCATTGTTGATTGTAAACATGTTGGGTGAAGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTCAACATCCCATTGAGGGCATTGGGA +
Preference number: 5 (lower is better)
Translates to: SLLIVNMLGEGVLGA*DTILYLNIPLRALG
Trigger: TCCCAATGCCCTCAATGGGATGTTGAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACATGTTTACAATCAACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 90 bp TTTTCCTGGGTCTCTTTGTCTTGGGCATATATCAGGAACTTGGCATaGTCAGAAGAGAGTGGAAAGCTTCTCACGGCATACACCATGCCA +
Preference number: 5 (lower is better)
Translates to: FSWVSLSWAYIRNLA*SEESGKLLTAYTMP
Trigger: TGGCATGGTGTATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCCCAAGACAAAGAGACCCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 90 bp GAGAGAGGGTGGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCCTaGAAAAACAATCTGTCCGCTTTCAGAGAGGCAAAGTACAACTTG +
Preference number: 5 (lower is better)
Translates to: ERGWIFFQCCPVGMS*KNNLSAFREAKYNL
Trigger: CAAGTTGTACTTTGCCTCTCTGAAAGCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS-3UTR CAA 90 bp ACGCTGATGGAAAAGCTCCTCCTCTTAGGTGTGTGCAATGTGATGCGGAAAGCGTCAGGAAATCCAGTCTaGCATAATGCGATTTCACCA +
Preference number: 5 (lower is better)
Translates to: TLMEKLLLLGVCNVMRKASGNPV*HNAISP
Trigger: TGGTGAAATCGCATTATGCAAGACTGGATTTCCTGA...CGCTTTCCGCATCACATTGCACACACCTAAGAGGAGGAGCTTTTCCATCAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGCTGGGTCTCTTTGTCTaGGGCATATATCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMLGLFV*GIYQEL
Trigger: AAGTTCCTGATATATGCCCAAGACAAAGAGACCCAG...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACGCGATCCAGGGGCTTaGTCACCGACAGCTGACCCG +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQRDPGA*SPTADP
Trigger: CGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGGGTGAAGGGGTGCTaGGAGCCTGAGACACGATTC +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAWVKGC*EPETRF
Trigger: GAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTGGGTGAAGGGGTGCTaGGAGCCTGAGACACGATTC +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCWVKGC*EPETRF
Trigger: GAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGGTGAAGGGGTGCTaGGAGCCTGAGACACGATTC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVWVKGC*EPETRF
Trigger: GAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCVTNPS*LFGSVW
Trigger: CCAGACCGACCCAAACAGCAACGACGGGTTAGTCAC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAVTNPS*LFGSVW
Trigger: CCAGACCGACCCAAACAGCAACGACGGGTTAGTCAC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TCAGCTTTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: SALALNHLWAGDKAPFWEMKPFF*ANDLRI
Trigger: AATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCAT...CTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFARIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS GCA 90 bp CCTTCGATAAGACTGCACTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAGAAGCCTCTACAGACGCCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: PSIRLHCKHLQEIQS*IMRFHQKPLQTPEA
Trigger: GGCTTCAGGCGTCTGTAGAGGCTTCTGGTGAAATCGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGTGCAGTCTTATCGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS CCA 90 bp TTTGTCTTGGGCATATATCAGGAACTTGGCATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATACACCATGCCATCTTCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: FVLGIYQELGMLRRE*KASHGIHHAIFIHL
Trigger: AAGGTGGATGAAGATGGCATGGTGTATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCCCAAGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 90 bp AGAGGCAAAGTACAACTTGTGAAGAAGGATGCTCTGGCCATAGGTTaGGCCCTCAGAACTATTTTTAGCTCAGACATCTGGACAGGAATG +
Preference number: 5 (lower is better)
Translates to: RGKVQLVKKDALAIG*ALRTIFSSDIWTGM
Trigger: CATTCCTGTCCAGATGTCTGAGCTAAAAATAGTTCTGAGGGCCCAACCTATGGCCAGAGCATCCTTCTTCACAAGTTGTACTTTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS-3UTR CAA 90 bp GGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCACATTCATGTCAATAACATaGATGACAATGTCAATGGGG +
Preference number: 5 (lower is better)
Translates to: GLSSIRRIPTGLMASGSTFMSIT*MTMSMG
Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGACCCGTCGTTGCTGTTaGGGTCGGTCTGGATGGCGA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKTRRCC*GRSGWR
Trigger: TCGCCATCCAGACCGACCCAAACAGCAACGACGGGT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp ATGGGTCTTTCATCCATTCGTCGGATTCCCACAGGCTTGATGGCATCAGGCTCCATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: MGLSSIRRIPTGLMASGSMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...GGAGCCTGATGCCATCAAGCCTGTGGGAATCCGACGAATGGATGAAAGACCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp AGTTCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: SSCEICLFENVWHRPHLSAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...AGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CAA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACC +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFSVQSP*ESHWQT
Trigger: GGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS TCA 90 bp TGTGATGATGTCACCAGTCTCATTGTTGATTGTAAACATGTTGGGTaGAGGGGTGCTTGGAGCCTGAGACACGATTCTGTACCTCAACAT +
Preference number: 5 (lower is better)
Translates to: CDDVTSLIVDCKHVG*RGAWSLRHDSVPQH
Trigger: ATGTTGAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACATGTTTACAATCAACAATGAGACTGGTGACATCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 90 bp CCTTCGATAAGACTGCACTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAGAAGCCTCTACAGACGCCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSIRLHCKHLQEIQS*IMRFHQKPLQTPEA
Trigger: TGCTTCAGGCGTCTGTAGAGGCTTCTGGTGAAATCGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGTGCAGTCTTATCGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
CDS GCA 90 bp ATTATCAGGGTCTCCCTTGTAGCTGACGGTGTACCCGCTCTGATGTaGAGGATAAAAGAAAGTAGTATCCTTTCTTCACTTCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: IIRVSLVADGVPALM*RIKESSILSSLLHL
Trigger: CAGATGCAGAAGTGAAGAAAGGATACTACTTTCTTTTATCCTGCACATCAGAGCGGGTACACCGTCAGCTACAAGGGAGACCCTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGATCCTGACAAGCTCTaGAGGAAAAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVDPDKL*RKRSPG
Trigger: TCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGATC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKVTNPS*LFGSVW
Trigger: CCAGACCGACCCAAACAGCAACGACGGGTTAGTCAC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGATAGGAGGAATTCCATaGTCAGAAGCAAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMIGGIP*SEARKV
Trigger: TACTTTCCTTGCTTCTGACAATGGAATTCCTCCTAT...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTAGCTCTGAACCATCTATGGGCTGGCGACAAAGCGCCATTTTGGGAGAGTCCACAAATGGTCCAGCATTaGGATCAATGTCATAATCAA +
Preference number: 5 (lower is better)
Translates to: LALNHLWAGDKAPFWESPQMVQH*DQCHNQ
Trigger: TTGATTATGACATTGATCCAAATGCTGGACCATTTG...TGGACTCTCCCAAAATGGCGCTTTGTCGCCAGCCCATAGATGGTTCAGAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp GGAAAGCAAAGGGGAAGCAGACACATGTTCACATGGCTCCCTTTTTGCTGTCCTTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: GKQRGSRHMFTWLPFCCPSIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...AGGACAGCAAAAAGGGAGCCATGTGAACATGTGTCTGCTTCCCCTTTGCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCGGATTCCCACAGGCTaGATGGCATCAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRIPTG*MASGST
Trigger: TGTGGAGCCTGATGCCATCAAGCCTGTGGGAATCCG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TCTTGTGAGATCTGCTTGTTTGAAAATGTGTGGCACCGCCCCCATCTCTCTCTTTCTTGTGAGATCTGCTaGTTTGAAAATGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: SCEICLFENVWHRPHLSLSCEIC*FENVWH
Trigger: GTGCCACACATTTTCAAACAAGCAGATCTCACAAGA...AAGAGAGAGATGGGGGCGGTGCCACACATTTTCAAACAAGCAGATCTCACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS-3UTR CAA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCCGACAAAGCGCCATTTaGGGAGAGTCCACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: YLRNISEKALNDATDVKVRQSAI*GESTAG
Trigger: TCCTGCTGTGGACTCTCCCAAAATGGCGCTTTGTCG...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS TCA 90 bp GTTGGAGTCACACTGGCAAACCTTCACACGCAGGATGGAAATATTTaGTTTGGGAGGATTACCCGAATCTGTGATTATGATGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: VGVTLANLHTQDGNI*FGRITRICDYDGNF
Trigger: GAAGTTCCCATCATAATCACAGATTCGGGTAATCCTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS-3UTR CAA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAACAATTTTACTGCCACTaGCCACTTTTCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKQFYCH*PLFLGL
Trigger: GAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATTG...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCGATCCTGACAAGCTCTaGAGGAAAAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SEVYHLYSGTQYRGKAVVDPDKL*RKRSPG
Trigger: TCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGATC...GACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGATCCTGACAAGCTCTaGAGGAAAAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFDPDKL*RKRSPG
Trigger: TCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGATC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTACCTCAACATCCCATaGAGGGCATTGGGATCGTCA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVYLNIP*RALGSS
Trigger: TGACGATCCCAATGCCCTCAATGGGATGTTGAGGTA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTACCTCAACATCCCATaGAGGGCATTGGGATCGTCA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCYLNIP*RALGSS
Trigger: TGACGATCCCAATGCCCTCAATGGGATGTTGAGGTA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATGGGTGAAGGGGTGCTaGGAGCCTGAGACACGATTC +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQWVKGC*EPETRF
Trigger: GAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAGGCCATATGTGGGATaGCCTTCCATGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVRPYVG*PSMSVA
Trigger: AGCTACAGACATGGAAGGCAATCCCACATATGGCCT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAGGCCATATGTGGGATaGCCTTCCATGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFARPYVG*PSMSVA
Trigger: AGCTACAGACATGGAAGGCAATCCCACATATGGCCT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGCTGGTGTATGGGGTaGATCCTTATCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGWCMG*ILIGHS
Trigger: ACTGTGACCGATAAGGATCAACCCCATACACCAGCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQVTNPS*LFGSVW
Trigger: CCAGACCGACCCAAACAGCAACGACGGGTTAGTCAC...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTCAAAGTCGATTGGTTaGACCACGGTGACTAACCCG +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCSKSIG*TTVTNP
Trigger: CGGGTTAGTCACCGTGGTCAAACCAATCGACTTTGA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp CAATGCTGCCCTGTGGGAATGTCCTGGAAAAACAATCTGTCCGATACGCTGATGGGACAAACATCCTATTaGTTTCAAAGTCGATTGGTT +
Preference number: 5 (lower is better)
Translates to: QCCPVGMSWKNNLSDTLMGQTSY*FQSRLV
Trigger: AACCAATCGACTTTGAAACAAATAGGATGTTTGTCC...CATCAGCGTATCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTGCCCACGAGTAATATTAATTGAATaGGGGTCTGGAGTTTCGCAA +
Preference number: 5 (lower is better)
Translates to: LGPKAGMIDALLRSWCPRVILIE*GSGVSQ
Trigger: TTGCGAAACTCCAGACCCCAATTCAATTAATATTAC...TCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCAATTTTACTGCCACTaGCCACTTTTCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVQFYCH*PLFLGL
Trigger: GAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATTG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCAATTTTACTGCCACTaGCCACTTTTCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCQFYCH*PLFLGL
Trigger: GAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATTG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGATCCTGACAAGCTCTaGAGGAAAAGGTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKDPDKL*RKRSPG
Trigger: TCCAGGGGACCTTTTCCTCAAGAGCTTGTCAGGATC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCCCATTGAGGGCATaGGGATCGTCAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCIPLRA*GSSASI
Trigger: AATTGATGCTGACGATCCCAATGCCCTCAATGGGAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATCCCATTGAGGGCATaGGGATCGTCAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAIPLRA*GSSASI
Trigger: AATTGATGCTGACGATCCCAATGCCCTCAATGGGAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTATCCCATTGAGGGCATaGGGATCGTCAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVIPLRA*GSSASI
Trigger: AATTGATGCTGACGATCCCAATGCCCTCAATGGGAT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCAAGGCCATATGTGGGATaGCCTTCCATGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPRPYVG*PSMSVA
Trigger: AGCTACAGACATGGAAGGCAATCCCACATATGGCCT...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGGCTGGTGTATGGGGTaGATCCTTATCGGTCACAGT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKGWCMG*ILIGHS
Trigger: ACTGTGACCGATAAGGATCAACCCCATACACCAGCC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATCAAAGTCGATTGGTTaGACCACGGTGACTAACCCG +
Preference number: 5 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPSKSIG*TTVTNP
Trigger: CGGGTTAGTCACCGTGGTCAAACCAATCGACTTTGA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATGGATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: SYSLGPKAGMIDALLRSWMKPFF*ANDLRI
Trigger: AATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCAT...CCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAGGCAGGAGAATCGCTaGAACTCGGGAGGTGAAAGT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRQENR*NSGGES
Trigger: ACTTTCACCTCCCGAGTTCAAGCGATTCTCCTGCCT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTGGGTCTCTTTGTCTaGGGCATATATCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFALGLFV*GIYQEL
Trigger: AAGTTCCTGATATATGCCCAAGACAAAGAGACCCAG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTCTGGGTCTCTTTGTCTaGGGCATATATCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVLGLFV*GIYQEL
Trigger: AAGTTCCTGATATATGCCCAAGACAAAGAGACCCAG...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATTTTCCTGGGTCTCTTaGTCTTGGGCATATATCAGG +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAFSWVS*SWAYIR
Trigger: CCTGATATATGCCCAAGACAAAGAGACCCAGGAAAA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TATTTACGGAATATCTCAGAAAAGGCCCTCAATGATGCAACAGATGTGAAAGTCCAATTTTACTGCCACTaGCCACTTTTCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: YLRNISEKALNDATDVKVQFYCH*PLFLGL
Trigger: GAGACCCAGGAAAAGTGGCAAGTGGCAGTAAAATTG...GACTTTCACATCTGTTGCATCATTGAGGGCCTTTTCTGAGATATTCCGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTTGATTGTAAACATGTaGGGTGAAGGGGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCLIVNM*GEGVLG
Trigger: TCCAAGCACCCCTTCACCCAACATGTTTACAATCAA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTGATTGTAAACATGTaGGGTGAAGGGGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVLIVNM*GEGVLG
Trigger: TCCAAGCACCCCTTCACCCAACATGTTTACAATCAA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAGGCCATATGTGGGATaGCCTTCCATGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKRPYVG*PSMSVA
Trigger: AGCTACAGACATGGAAGGCAATCCCACATATGGCCT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTGTTGACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCATAGGAGGAATTCCATaGTCAGAAGCAAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LLTLALFSDVMWFILIRSIGGIP*SEARKV
Trigger: TACTTTCCTTGCTTCTGACAATGGAATTCCTCCTAT...GGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGTCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp ACCCTGGCACTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCCAAATGGTCCAGCATTaGGATCAATGTCATAATCAA +
Preference number: 5 (lower is better)
Translates to: TLALFSDVMWFILIRSKGQMVQH*DQCHNQ
Trigger: TTGATTATGACATTGATCCAAATGCTGGACCATTTG...GCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAGTGCCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 90 bp TTATCTCTTACATCATCTTCTGGATCAATTAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGTTTCATCCATACCACAAACATCAGC +
Preference number: 5 (lower is better)
Translates to: LSLTSSSGSIKSCLA*RSLSRRFIHTTNIS
Trigger: GCTGATGTTTGTGGTATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGTAAGAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 90 bp CTGGCCATAGGTTGGGCCCTCAGAACTATTTTTAGCTCAGACATCTaGACAGGAATGTATAAAGAAAGAGACTACAATGTGGAAATAATC +
Preference number: 5 (lower is better)
Translates to: LAIGWALRTIFSSDI*TGMYKERDYNVEII
Trigger: GATTATTTCCACATTGTAGTCTCTTTCTTTATACATTCCTGTCCAGATGTCTGAGCTAAAAATAGTTCTGAGGGCCCAACCTATGGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCAGGAAATCCAGTCTaGCATAATGCGATTTCACCA +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASGNPV*HNAISP
Trigger: TGGTGAAATCGCATTATGCAAGACTGGATTTCCTGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTTGCTAAACTTCACATaGAGAAGAGGCTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCLLNFT*RRGCPS
Trigger: TGAAGGACAGCCTCTTCTCAATGTGAAGTTTAGCAA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269141.8
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TATAGAGACTTCGAACCCGCCAGAGTGGGATGTACATTTGGTGTATCACAAACTCTTTTTCCATTGCAGTaGCTAAACTTCACATTGAGA +
Preference number: 5 (lower is better)
Translates to: YRDFEPARVGCTFGVSQTLFPLQ*LNFTLR
Trigger: TCTCAATGTGAAGTTTAGCAACTGCAATGGAAAAAG...AGTTTGTGATACACCAAATGTACATCCCACTCTGGCGGGTTCGAAGTCTCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCTPQLR*ASGSIL
Trigger: TAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVTPQLR*ASGSIL
Trigger: TAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCATCCCATTGAGGGCATaGGGATCGTCAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLIPLRA*GSSASI
Trigger: AATTGATGCTGACGATCCCAATGCCCTCAATGGGAT...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGATCCCATTGAGGGCATaGGGATCGTCAGCATCAATT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKIPLRA*GSSASI
Trigger: AATTGATGCTGACGATCCCAATGCCCTCAATGGGAT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATACCTCAACATCCCATaGAGGGCATTGGGATCGTCA +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQYLNIP*RALGSS
Trigger: TGACGATCCCAATGCCCTCAATGGGATGTTGAGGTA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTGATTGTAAACATGTaGGGTGAAGGGGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLIVNM*GEGVLG
Trigger: TCCAAGCACCCCTTCACCCAACATGTTTACAATCAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAAGGCCATATGTGGGATaGCCTTCCATGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQRPYVG*PSMSVA
Trigger: AGCTACAGACATGGAAGGCAATCCCACATATGGCCT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATCAAAGTCGATTGGTTaGACCACGGTGACTAACCCG +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQSKSIG*TTVTNP
Trigger: CGGGTTAGTCACCGTGGTCAAACCAATCGACTTTGA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFAMKPFF*ANDLRI
Trigger: AATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCAT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCMKPFF*ANDLRI
Trigger: AATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATTGCTGAGATCAATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: GSYSLGPKAGMIDALLRSMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...TGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp CTCTTCTCTGATGTAATGTGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: LFSDVMWFILIRSKGRHDSIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...ATCATGCCTGCCTTTGGACCTAATGAGTATGAACCACATTACATCAGAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS-3UTR CAA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCATCAGGAAATCCAGTCTaGCATAATGCGATTTCACCA +
Preference number: 5 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPSGNPV*HNAISP
Trigger: TGGTGAAATCGCATTATGCAAGACTGGATTTCCTGA...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCCTGGGTCTCTTTGTCTaGGGCATATATCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLLGLFV*GIYQEL
Trigger: AAGTTCCTGATATATGCCCAAGACAAAGAGACCCAG...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCTGGGTCTCTTTGTCTaGGGCATATATCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLGLFV*GIYQEL
Trigger: AAGTTCCTGATATATGCCCAAGACAAAGAGACCCAG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTTTTCCTGGGTCTCTTaGTCTTGGGCATATATCAGG +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKFSWVS*SWAYIR
Trigger: CCTGATATATGCCCAAGACAAAGAGACCCAGGAAAA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTACTGTGCTTACTGAATaGTCTTGGGAACACTATTTC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVTVLTE*SWEHYF
Trigger: GAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAACTGTGCTTACTGAATaGTCTTGGGAACACTATTTC +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFATVLTE*SWEHYF
Trigger: GAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTGTGCTTACTGAATaGTCTTGGGAACACTATTTC +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCTVLTE*SWEHYF
Trigger: GAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp ACGCTGGGGTCAGAGGTGTATCATTTATATTCTGGTACACAATACAGAGGCAAAGGACAAACATCCTATTaGTTTCAAAGTCGATTGGTT +
Preference number: 5 (lower is better)
Translates to: TLGSEVYHLYSGTQYRGKGQTSY*FQSRLV
Trigger: AACCAATCGACTTTGAAACAAATAGGATGTTTGTCC...TTTGCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp ATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCCAATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: IYILVHNTEAKLLSEVSPMKPFF*ANDLRI
Trigger: AATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCAT...TGGAGAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTATAGGAGGAATTCCATaGTCAGAAGCAAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVIGGIP*SEARKV
Trigger: TACTTTCCTTGCTTCTGACAATGGAATTCCTCCTAT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGGCAGGATGGAAATATTaGATTTGGGAGGATTACCCG +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKAGWKY*IWEDYP
Trigger: CGGGTAATCCTCCCAAATCAAATATTTCCATCCTGC...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVSIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFASIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCSIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCTGTGTTTCAAAGCATaGAGAAGAGGCTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKLCFKA*RRGCPS
Trigger: TGAAGGACAGCCTCTTCTCAATGCTTTGAAACACAG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTCAGGAAATCCAGTCTaGCATAATGCGATTTCACCA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKSGNPV*HNAISP
Trigger: TGGTGAAATCGCATTATGCAAGACTGGATTTCCTGA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269141.8
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCCTTTTTCCATTGCAGTaGCTAAACTTCACATTGAGA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCLFPLQ*LNFTLR
Trigger: TCTCAATGTGAAGTTTAGCAACTGCAATGGAAAAAG...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269141.8
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAATTTTCCTGGGTCTCTTaGTCTTGGGCATATATCAGG +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQFSWVS*SWAYIR
Trigger: CCTGATATATGCCCAAGACAAAGAGACCCAGGAAAA...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKTPQLR*ASGSIL
Trigger: TAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTACTGTGCTTACTGAATaGTCTTGGGAACACTATTTC +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFTVLTE*SWEHYF
Trigger: GAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTAATGGGGTTCTCCACTaGATTTCCATTAATATCTAC +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVNGVLH*ISINIY
Trigger: GTAGATATTAATGGAAATCAAGTGGAGAACCCCATT...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCAAATGGGGTTCTCCACTaGATTTCCATTAATATCTAC +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFANGVLH*ISINIY
Trigger: GTAGATATTAATGGAAATCAAGTGGAGAACCCCATT...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCTTCATGTCAATAACATaGATGACAATGTCAATGGGG +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCFMSIT*MTMSMG
Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGGACAAACATCCTATTaGTTTCAAAGTCGATTGGTT +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCGQTSY*FQSRLV
Trigger: AACCAATCGACTTTGAAACAAATAGGATGTTTGTCC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGGACAAACATCCTATTaGTTTCAAAGTCGATTGGTT +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVGQTSY*FQSRLV
Trigger: AACCAATCGACTTTGAAACAAATAGGATGTTTGTCC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATAGGAGGAATTCCATaGTCAGAAGCAAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFIGGIP*SEARKV
Trigger: TACTTTCCTTGCTTCTGACAATGGAATTCCTCCTAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCGTAATATTAATTGAATaGGGGTCTGGAGTTTCGCAA +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCVILIE*GSGVSQ
Trigger: TTGCGAAACTCCAGACCCCAATTCAATTAATATTAC...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GTGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTGTAATATTAATTGAATaGGGGTCTGGAGTTTCGCAA +
Preference number: 5 (lower is better)
Translates to: VFFQTVWITDIPSEPKLVVILIE*GSGVSQ
Trigger: TTGCGAAACTCCAGACCCCAATTCAATTAATATTAC...AACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: FFQTVWITDIPSEPKLVCMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...GCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGCACTTTTTCCATTGCAGTaGCTAAACTTCACTCTGTAT +
Preference number: 5 (lower is better)
Translates to: FSKQYGSLIFPLSPNWFALFPLQ*LNFTLY
Trigger: ATACAGAGTGAAGTTTAGCAACTGCAATGGAAAAAG...TGCAAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS CCA 90 bp AAATATTATCTCTTACATCATCTTCTGGATCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCCGGCGTTTCATCCATACCACAAACA +
Preference number: 5 (lower is better)
Translates to: KYYLLHHLLDQLKVV*PGVLYPGVSSIPQT
Trigger: TGTTTGTGGTATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGTAAGAGATAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCTTTTTCCATTGCAGTaGCTAAACTTCACATTGAGA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFLFPLQ*LNFTLR
Trigger: TCTCAATGTGAAGTTTAGCAACTGCAATGGAAAAAG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269141.8
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQTPQLR*ASGSIL
Trigger: TAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTTTCATGTCAATAACATaGATGACAATGTCAATGGGG +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFFMSIT*MTMSMG
Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGGACAAACATCCTATTaGTTTCAAAGTCGATTGGTT +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFGQTSY*FQSRLV
Trigger: AACCAATCGACTTTGAAACAAATAGGATGTTTGTCC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTGTAATATTAATTGAATaGGGGTCTGGAGTTTCGCAA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFVILIE*GSGVSQ
Trigger: TTGCGAAACTCCAGACCCCAATTCAATTAATATTAC...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTCAAATGGTCCAGCATTaGGATCAATGTCATAATCAA +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFQMVQH*DQCHNQ
Trigger: TTGATTATGACATTGATCCAAATGCTGGACCATTTG...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp TATCATTTATATTCTGGTACACAATACAGAGGCAAAGCTGTTGTCAGAAGTCTCTCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: YHLYSGTQYRGKAVVRSLSIKSC*AWRSLS
Trigger: GGATAAAGAACGCCAGGCCAAACAACTTTTAATTGA...GAGACTTCTGACAACAGCTTTGCCTCTGTATTGTGTACCAGAATATAAATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269141.8
CDS-3UTR CAA 90 bp TGTTTTTCCAAACAGTATGGATCACTGATATTCCCTCTGAGCCCAAATTGGTTTAAAAACACCTTGATCTaGCACAAATGTGCTCCATTT +
Preference number: 5 (lower is better)
Translates to: CFSKQYGSLIFPLSPNWFKNTLI*HKCAPF
Trigger: AAATGGAGCACATTTGTGCAAGATCAAGGTGTTTTT...AAACCAATTTGGGCTCAGAGGGAATATCAGTGATCCATACTGTTTGGAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675708.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAACTGTGCTTACTGAATaGTCTTGGGAACACTATTTC +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQTVLTE*SWEHYF
Trigger: GAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGAATGGGGTTCTCCACTaGATTTCCATTAATATCTAC +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKNGVLH*ISINIY
Trigger: GTAGATATTAATGGAAATCAAGTGGAGAACCCCATT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGTTCATGTCAATAACATaGATGACAATGTCAATGGGG +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKFMSIT*MTMSMG
Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAATAGGAGGAATTCCATaGTCAGAAGCAAGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQIGGIP*SEARKV
Trigger: TACTTTCCTTGCTTCTGACAATGGAATTCCTCCTAT...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGCAAATGGTCCAGCATTaGGATCAATGTCATAATCAA +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKQMVQH*DQCHNQ
Trigger: TTGATTATGACATTGATCCAAATGCTGGACCATTTG...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp GGAATATCAGTTGAAATTGTTTGTACTTGTCCAAAAACCAAGTTCACCCTGAAGATGGAAATATTTGATTaGGGAGGATTACCCGAATCT +
Preference number: 5 (lower is better)
Translates to: GISVEIVCTCPKTKFTLKMEIFD*GGLPES
Trigger: AGATTCGGGTAATCCTCCCAAATCAAATATTTCCAT...CTTCAGGGTGAACTTGGTTTTTGGACAAGTACAAACAATTTCAACTGATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAAGTAATATTAATTGAATaGGGGTCTGGAGTTTCGCAA +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQVILIE*GSGVSQ
Trigger: TTGCGAAACTCCAGACCCCAATTCAATTAATATTAC...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS-3UTR CAA 90 bp AATAATACATACACATGTTCTGAAGTTTCTGCACTTCTCCATAGACTATGCCAACAAATGGTCCAGCATTaGGATCAATGTCATAATCAA +
Preference number: 5 (lower is better)
Translates to: NNTYTCSEVSALLHRLCQQMVQH*DQCHNQ
Trigger: TTGATTATGACATTGATCCAAATGCTGGACCATTTG...TTGGCATAGTCTATGGAGAAGTGCAGAAACTTCAGAACATGTGTATGTATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000399380.7
CDS CCA 72 bp GCAGCAGGGTCCGCAGCGCTCCCGCTATCCGGCACATaGAGGCGGAGAGGGGCCGAGCGAAGAGCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: AAGSAALPLSGT*RRRGAERRAGG
Trigger: TCCTCCGGCTCTTCGCTCGGCCCCTCTCCGCCTCCATGTGCCGGATAGCGGGAGCGCTGCGGACCCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269141.8
ENST00000413878.2
CDS CCA 72 bp ACGGTGACTAACCCGTCGTTGCTGTTTGGGTCGGTCTaGATGGCGAACCGTCCAGTAGGATCTCCGCCACTG +
Preference number: 6 (lower is better)
Translates to: TVTNPSLLFGSV*MANRPVGSPPL
Trigger: CAGTGGCGGAGATCCTACTGGACGGTTCGCCATCCAGACCGACCCAAACAGCAACGACGGGTTAGTCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 72 bp GATCTCATTTTCCATGCTGGGAGCTCACAGATTCCCTaGAGCAATCTGAAGCAGGGCCGCCAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: DLIFHAGSSQIP*SNLKQGRQQRQ
Trigger: CTGCCGCTGCTGGCGGCCCTGCTTCAGATTGCTGCAGGGAATCTGTGAGCTCCCAGCATGGAAAATGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS CAA 72 bp GCACCCACAATCCTGTCCACATCTGTGCAGTCCCCGTaGGAGTCACACTGGCAAACCTTCACACGCAGGATG +
Preference number: 6 (lower is better)
Translates to: APTILSTSVQSP*ESHWQTFTRRM
Trigger: CATCCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGATGTGGACAGGATTGTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 72 bp AAGTCGATTGGTTTGACCACGGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGGATGGCGAACCGTCCA +
Preference number: 6 (lower is better)
Translates to: KSIGLTTVTNPS*LFGSVWMANRP
Trigger: TGGACGGTTCGCCATCCAGACCGACCCAAACAGCAACGACGGGTTAGTCACCGTGGTCAAACCAATCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp TACAGACGCCTGAAGCCTGCATTTGAAAGAATAATCTaGGCAGCTGGTGCCCAACCCTGTCCCCTACTCCGC +
Preference number: 6 (lower is better)
Translates to: YRRLKPAFERII*AAGAQPCPLLR
Trigger: GCGGAGTAGGGGACAGGGTTGGGCACCAGCTGCTCAGATTATTCTTTCAAATGCAGGCTTCAGGCGTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS TCA 72 bp GTCCCCCTGAGGCATTATCAGGGTCTCCCTTGTAGCTaGCGGTGTACCCGCTCTGATGTGCAGGATAAAAGA +
Preference number: 6 (lower is better)
Translates to: VPLRHYQGLPCS*RCTRSDVQDKR
Trigger: TCTTTTATCCTGCACATCAGAGCGGGTACACCGTCAGCTACAAGGGAGACCCTGATAATGCCTCAGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS TCA 72 bp ATCTGCTCGCGATCCAGGGGCTTTGTCACCGACAGCTaGCCCGAGATGGGGTTGATAATGAAGATACCAGTT +
Preference number: 6 (lower is better)
Translates to: ICSRSRGFVTDS*PEMGLIMKIPV
Trigger: AACTGGTATCTTCATTATCAACCCCATCTCGGGTCAGCTGTCGGTGACAAAGCCCCTGGATCGCGAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 72 bp GAGATGGGGTTGATAATGAAGATACCAGTTGGAGGCTaGTCAGCTCCTGGCCCAGTTACACTGTACCGCAGT +
Preference number: 6 (lower is better)
Translates to: EMGLIMKIPVGG*SAPGPVTLYRS
Trigger: ACTGCGGTACAGTGTAACTGGGCCAGGAGCTGACCAGCCTCCAACTGGTATCTTCATTATCAACCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 72 bp GACCTCTGGTTTAGTGGTGGTAGACCAGAGAGAGGGTaGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCC +
Preference number: 6 (lower is better)
Translates to: DLWFSGGRPERG*IFFQCCPVGMS
Trigger: GGACATTCCCACAGGGCAGCATTGGAAGAAAATCCACCCTCTCTCTGGTCTACCACCACTAAACCAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CAA 90 bp TTTGTTTCAAAGTCGATTGGTTTGACCACGGTGACTAACCCGTCGTaGCTGTTTGGGTCGGTCTGGATGGCGAACCGTCCAGTAGGATCT +
Preference number: 6 (lower is better)
Translates to: FVSKSIGLTTVTNPS*LFGSVWMANRPVGS
Trigger: AGATCCTACTGGACGGTTCGCCATCCAGACCGACCCAAACAGCAACGACGGGTTAGTCACCGTGGTCAAACCAATCGACTTTGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp CTCTGTATTTCCAGTACACTCTGCTTAGAGTCCCCCTaGGGCATTATCAGGGTCTCCCTTGTAGCTGACGGT +
Preference number: 6 (lower is better)
Translates to: LCISSTLCLESP*GIIRVSLVADG
Trigger: ACCGTCAGCTACAAGGGAGACCCTGATAATGCCTCAGGGGGACTCTAAGCAGAGTGTACTGGAAATACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS CCA 72 bp CCAAAGGCAGGCATGATAGATGCATTGCTGAGATCATaGTGCCCACGAAGCCAAGGTCATAGGTGTAAGCTC +
Preference number: 6 (lower is better)
Translates to: PKAGMIDALLRS*CPRSQGHRCKL
Trigger: GAGCTTACACCTATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS TCA 72 bp CTGGTCAGCTCCTGGCCCAGTTACACTGTACCGCAGTaGAAGGTTTTTATCTCTATCAGACCTGATCCTGAC +
Preference number: 6 (lower is better)
Translates to: LVSSWPSYTVPQ*KVFISIRPDPD
Trigger: GTCAGGATCAGGTCTGATAGAGATAAAAACCTTTCACTGCGGTACAGTGTAACTGGGCCAGGAGCTGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 72 bp GAGGCCTCCCCGGAAGCCAAACAGATGCCAGCATTATaGTTCCTGTACAACCTCATTAATGAAGTCCCCAAT +
Preference number: 6 (lower is better)
Translates to: EASPEAKQMPAL*FLYNLINEVPN
Trigger: ATTGGGGACTTCATTAATGAGGTTGTACAGGAAGCATAATGCTGGCATCTGTTTGGCTTCCGGGGAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS GCA 72 bp AAGGCAGGCATGATAGATGCATTGCTGAGATCATGGTaGCCACGAAGCCAAGGTCATAGGTGTAAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: KAGMIDALLRSW*PRSQGHRCKLS
Trigger: AGAGAGCTTACACCTATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS CCA 72 bp CCTGGGTCTCTTTGTCTTGGGCATATATCAGGAACTTaGCATGCTCAGAAGAGAGTGGAAAGCTTCTCACGG +
Preference number: 6 (lower is better)
Translates to: PGSLCLGHISGT*HAQKRVESFSR
Trigger: CCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCCCAAGACAAAGAGACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 72 bp CTGTCCACATCTGTGCAGTCCCCGTTGGAGTCACACTaGCAAACCTTCACACGCAGGATGGAAATATTTGAT +
Preference number: 6 (lower is better)
Translates to: LSTSVQSPLESH*QTFTRRMEIFD
Trigger: ATCAAATATTTCCATCCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACGGGGACTGCACAGATGTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 90 bp TGCCACTTTTCCTGGGTCTCTTTGTCTTGGGCATATATCAGGAACTaGGCATGCTCAGAAGAGAGTGGAAAGCTTCTCACGGCATACACC +
Preference number: 6 (lower is better)
Translates to: CHFSWVSLSWAYIRN*ACSEESGKLLTAYT
Trigger: GGTGTATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCCCAAGACAAAGAGACCCAGGAAAAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS TCA 72 bp GAGCCTGAGACACGATTCTGTACCTCAACATCCCATTaGGGGCATTGGGATCGTCAGCATCAATTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: EPETRFCTSTSH*GHWDRQHQLLL
Trigger: TAACAGCAATTGATGCTGACGATCCCAATGCCCTCAATGGGATGTTGAGGTACAGAATCGTGTCTCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp ATTGTAAACATGTTGGGTGAAGGGGTGCTTGGAGCCTaGGACACGATTCTGTACCTCAACATCCCATTGAGG +
Preference number: 6 (lower is better)
Translates to: IVNMLGEGVLGA*DTILYLNIPLR
Trigger: CCTCAATGGGATGTTGAGGTACAGAATCGTGTCTCAGGCTCCAAGCACCCCTTCACCCAACATGTTTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp ATCTGGGAGTCACAGGTCCACAGAAAAGAAGCTTGGTaGTCTCATTTTCCATGCTGGGAGCTCACAGATTCC +
Preference number: 6 (lower is better)
Translates to: IWESQVHRKEAW*SHFPCWELTDS
Trigger: GGAATCTGTGAGCTCCCAGCATGGAAAATGAGATCACCAAGCTTCTTTTCTGTGGACCTGTGACTCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413878.2
CDS CCA 72 bp GGCATATATCAGGAACTTGGCATGCTCAGAAGAGAGTaGAAAGCTTCTCACGGCATACACCATGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: GIYQELGMLRRE*KASHGIHHAIF
Trigger: GAAGATGGCATGGTGTATGCCGTGAGAAGCTTTCCACTCTCTTCTGAGCATGCCAAGTTCCTGATATATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CAA 72 bp CTTCTGCTGACTCCTTCACTGACTCCTCAGTTAAGGTaGGCTTCAGGCTCAATTTTACTGCCACTTGCCACT +
Preference number: 6 (lower is better)
Translates to: LLLTPSLTPQLR*ASGSILLPLAT
Trigger: AGTGGCAAGTGGCAGTAAAATTGAGCCTGAAGCCAACCTTAACTGAGGAGTCAGTGAAGGAGTCAGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 72 bp TACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATaGCTGAGATCATGGTGCCCACGAAGCCAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: YSLGPKAGMIDA*LRSWCPRSQGH
Trigger: ATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS CAA 90 bp TGTGGTTCATACTCATTAGGTCCAAAGGCAGGCATGATAGATGCATaGCTGAGATCATGGTGCCCACGAAGCCAAGGTCATAGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: CGSYSLGPKAGMIDA*LRSWCPRSQGHRCK
Trigger: CTTACACCTATGACCTTGGCTTCGTGGGCACCATGATCTCAGCAATGCATCTATCATGCCTGCCTTTGGACCTAATGAGTATGAACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675173.1
CDS GCA 72 bp ACAGTTTCTGGAACACATCCAACTGTTTCAGGCTTCTaGCTTGCTCATGCTAGCCTATCTGAGTGGAACACT +
Preference number: 6 (lower is better)
Translates to: TVSGTHPTVSGF*LAHASLSEWNT
Trigger: AGTGTTCCACTCAGATAGGCTAGCATGAGCAAGGCAGAAGCCTGAAACAGTTGGATGTGTTCCAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418492.5
CDS GCA 72 bp GTAAGTTTTCTGAGGCCTCCCCGGAAGCCAAACAGATaGCAGCATTATGCTTCCTGTACAACCTCATTAATG +
Preference number: 6 (lower is better)
Translates to: VSFLRPPRKPNR*QHYASCTTSLM
Trigger: CATTAATGAGGTTGTACAGGAAGCATAATGCTGGCATCTGTTTGGCTTCCGGGGAGGCCTCAGAAAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675688.1
CDS CCA 72 bp CGTTGGAGTCACACTGGCAAACCTTCACACGCAGGATaGAAATATTTGATTTGGGAGGATTACCCGAATCTG +
Preference number: 6 (lower is better)
Translates to: RWSHTGKPSHAG*KYLIWEDYPNL
Trigger: CAGATTCGGGTAATCCTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGGTTTGCCAGTGTGACTCCAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 72 bp GTACAACTTGTGAAGAAGGATGCTCTGGCCATAGGTTaGGCCCTCAGAACTATTTTTAGCTCAGACATCTGG +
Preference number: 6 (lower is better)
Translates to: VQLVKKDALAIG*ALRTIFSSDIW
Trigger: CCAGATGTCTGAGCTAAAAATAGTTCTGAGGGCCCAACCTATGGCCAGAGCATCCTTCTTCACAAGTTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CCA 72 bp TGGATTTTCTTCCAATGCTGCCCTGTGGGAATGTCCTaGAAAAACAATCTGTCCGCTTTCAGAGAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: WIFFQCCPVGMS*KNNLSAFREAK
Trigger: CTTTGCCTCTCTGAAAGCGGACAGATTGTTTTTCCAGGACATTCCCACAGGGCAGCATTGGAAGAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CAA 72 bp TGTTGTCAACATGGTACCGGCATGAAGCCCTTCTTCTaGGCGAATGATCTTAGGATTGGGGGCAAAATAAGG +
Preference number: 6 (lower is better)
Translates to: CCQHGTGMKPFF*ANDLRIGGKIR
Trigger: CCTTATTTTGCCCCCAATCCTAAGATCATTCGCCAAGAAGAAGGGCTTCATGCCGGTACCATGTTGACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp TATTTTGCTGCATATATCGATCTGGGTCCTGAGCAGTaGATGTTGTCAACATGGTACCGGCATGAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: YFAAYIDLGPEQ*MLSTWYRHEAL
Trigger: AAGGGCTTCATGCCGGTACCATGTTGACAACATTCACTGCTCAGGACCCAGATCGATATATGCAGCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 72 bp ACCCAGTCTCTCTTCTGCCTTTGTAGGTGGCCACTGTaGTTACTGAATTGTCTTGGGAACACTATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: TQSLFCLCRWPL*LLNCLGNTISS
Trigger: TGAAGAAATAGTGTTCCCAAGACAATTCAGTAAGCACAGTGGCCACCTACAAAGGCAGAAGAGAGACTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS GCA 72 bp GTCTCCCTTGTAGCTGACGGTGTACCCGCTCTGATGTaGAGGATAAAAGAAAGTAGTATCCTTTCTTCACTT +
Preference number: 6 (lower is better)
Translates to: VSLVADGVPALM*RIKESSILSSL
Trigger: AAGTGAAGAAAGGATACTACTTTCTTTTATCCTGCACATCAGAGCGGGTACACCGTCAGCTACAAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430882.6
CDS CAA 72 bp TTTCTGGAACACATCCAACTGTTTCAGGCTTCTGCCTaGCTCATGCTAGCCTATCTGAGTGGAACACTCTTA +
Preference number: 6 (lower is better)
Translates to: FLEHIQLFQASA*LMLAYLSGTLL
Trigger: TAAGAGTGTTCCACTCAGATAGGCTAGCATGAGCAAGGCAGAAGCCTGAAACAGTTGGATGTGTTCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418492.5
CDS GCA 72 bp AGACTGCACTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCGATTTCACCAGAAGCCTCTACAGACG +
Preference number: 6 (lower is better)
Translates to: RLHCKHLQEIQS*IMRFHQKPLQT
Trigger: CGTCTGTAGAGGCTTCTGGTGAAATCGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGTGCAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269141.8
ENST00000413878.2
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 72 bp ACATCATCTTCTGGATCAATTAAAAGTTGTTTGGCCTaGCGTTCTTTATCCCGGCGTTTCATCCATACCACA +
Preference number: 6 (lower is better)
Translates to: TSSSGSIKSCLA*RSLSRRFIHTT
Trigger: TGTGGTATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 72 bp TGGCAAACCTTCACACGCAGGATGGAAATATTTGATTaGGGAGGATTACCCGAATCTGTGATTATGATGGGA +
Preference number: 6 (lower is better)
Translates to: WQTFTRRMEIFD*GGLPESVIMMG
Trigger: TCCCATCATAATCACAGATTCGGGTAATCCTCCCAAATCAAATATTTCCATCCTGCGTGTGAAGGTTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 72 bp TCATACTCACTGTGGGTCAGGCACTATACCAGACTCTaGATAAGTGTTTTCTCACTATCAATGGTGCCTAAG +
Preference number: 6 (lower is better)
Translates to: SYSLWVRHYTRL*ISVFSLSMVPK
Trigger: CTTAGGCACCATTGATAGTGAGAAAACACTTATCAAGAGTCTGGTATAGTGCCTGACCCACAGTGAGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS GCA 72 bp GGCATACACCATGCCATCTTCATCCACCTTAAAATCTaGAGGCTCACTGCTCTCATATTGTACTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: GIHHAIFIHLKI*RLTALILYFSF
Trigger: AAAAGAAAAGTACAATATGAGAGCAGTGAGCCTGCAGATTTTAAGGTGGATGAAGATGGCATGGTGTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000418492.5
ENST00000430882.6
ENST00000675708.1
ENST00000676445.1
CDS CCA 72 bp CTCTTACATCATCTTCTGGATCAATTAAAAGTTGTTTaGCCTGGCGTTCTTTATCCCGGCGTTTCATCCATA +
Preference number: 6 (lower is better)
Translates to: LLHHLLDQLKVV*PGVLYPGVSSI
Trigger: TATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CAA 72 bp TCTCTTACATCATCTTCTGGATCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCCCGGCGTTTCATCCAT +
Preference number: 6 (lower is better)
Translates to: SLTSSSGSIKSC*AWRSLSRRFIH
Trigger: ATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGTAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 72 bp ACTTCATTTCCATTGTATTCAATTGCTTACAGTTTCTaGAACACATCCAACTGTTTCAGGCTTCTGCCTTGC +
Preference number: 6 (lower is better)
Translates to: TSFPLYSIAYSF*NTSNCFRLLPC
Trigger: GCAAGGCAGAAGCCTGAAACAGTTGGATGTGTTCCAGAAACTGTAAGCAATTGAATACAATGGAAATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418492.5
CDS CCA 72 bp TTTAGTGTATCTAATATTTTGCTGCATATATCGATCTaGGTCCTGAGCAGTGAATGTTGTCAACATGGTACC +
Preference number: 6 (lower is better)
Translates to: FSVSNILLHISI*VLSSECCQHGT
Trigger: GGTACCATGTTGACAACATTCACTGCTCAGGACCCAGATCGATATATGCAGCAAAATATTAGATACACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS CCA 72 bp AGGATTCTGACTCCAAGTGTATTAGATTCCAAAGCCTaGCTCTCTTCACAATCATCTATGAGTAAATCAAGA +
Preference number: 6 (lower is better)
Translates to: RILTPSVLDSKA*LSSQSSMSKSR
Trigger: TCTTGATTTACTCATAGATGATTGTGAAGAGAGCCAGGCTTTGGAATCTAATACACTTGGAGTCAGAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CAA 90 bp AAAATATTATCTCTTACATCATCTTCTGGATCAATTAAAAGTTGTTaGGCCTGGCGTTCTTTATCCCGGCGTTTCATCCATACCACAAAC +
Preference number: 6 (lower is better)
Translates to: KILSLTSSSGSIKSC*AWRSLSRRFIHTTN
Trigger: GTTTGTGGTATGGATGAAACGCCGGGATAAAGAACGCCAGGCCAAACAACTTTTAATTGATCCAGAAGATGATGTAAGAGATAATATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269141.8
ENST00000399380.7
ENST00000413878.2
ENST00000430882.6
ENST00000675173.1
ENST00000675688.1
ENST00000675708.1
ENST00000676041.1
ENST00000676445.1
CDS TCA 72 bp CAAATAGTTGGTAGTATTCAAACCTCTGAATTCTGGTaGTACAAAATATCATATCCCCAAGCTTACCCAACA +
Preference number: 6 (lower is better)
Translates to: QIVGSIQTSEFW*YKISYPQAYPT
Trigger: TGTTGGGTAAGCTTGGGGATATGATATTTTGTATCACCAGAATTCAGAGGTTTGAATACTACCAACTATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CCA 72 bp GATTTATTCGACAGTTGTTTAACGTTTACCATGTTTTaGCAATGGTCTAGGTGTCTTACATATGTTCACTCA +
Preference number: 6 (lower is better)
Translates to: DLFDSCLTFTMF*QWSRCLTYVHS
Trigger: TGAGTGAACATATGTAAGACACCTAGACCATTGCCAAAACATGGTAAACGTTAAACAACTGTCGAATAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674998.1
CDS CAA 72 bp GGCAATGGTCTAGGTGTCTTACATATGTTCACTCATTaGATCCTCTTAGTACATGTGATACTAAGTTTTATT +
Preference number: 6 (lower is better)
Translates to: GNGLGVLHMFTH*ILLVHVILSFI
Trigger: AATAAAACTTAGTATCACATGTACTAAGAGGATCAAATGAGTGAACATATGTAAGACACCTAGACCATTGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674998.1