RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH18 (Homo sapiens)

Ensembl gene IDs: ENSG00000145526

Ensembl transcript IDs: ENST00000274170.8, ENST00000382275.6, ENST00000502796.5, ENST00000503132.1, ENST00000506372.5, ENST00000507632.2, ENST00000507958.5, ENST00000508350.1, ENST00000510297.1, ENST00000511273.1, ENST00000511423.5, ENST00000515257.6

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGATAGAGACAATAGTCTCGTGCTCAGTACAGCACACAACTGGTaGACTGAAGTTGCATACATTATAGTGCAGGCAGCAAATCCCCAT +
Preference number: 1 (lower is better)
Translates to: RDRDNSLVLSTAHNW*TEVAYIIVQAANPH
Trigger: ATGGGGATTTGCTGCCTGCACTATAATGTATGCAACTTCAGTGCACCAGTTGTGTGCTGTACTGAGCACGAGACTATTGTCTCTATCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR CCA 90 bp GTACGGGATAGAGACAATAGTCTCGTGCTCAGTACAGCACACAACTaGTGCACTGAAGTTGCATACATTATAGTGCAGGCAGCAAATCCC +
Preference number: 1 (lower is better)
Translates to: VRDRDNSLVLSTAHN*CTEVAYIIVQAANP
Trigger: GGGATTTGCTGCCTGCACTATAATGTATGCAACTTCAGTGCACCAGTTGTGTGCTGTACTGAGCACGAGACTATTGTCTCTATCCCGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR TCA 90 bp GTGGGCAGGGAAGTCATTGCCATCTCTACTTTGTGGTTTGGACCCTaGACACAGAGACTTTCGGAAACATATCTGAGGATAATAACTGTG +
Preference number: 1 (lower is better)
Translates to: VGREVIAISTLWFGP*TQRLSETYLRIITV
Trigger: CACAGTTATTATCCTCAGATATGTTTCCGAAAGTCTCTGTGTTCAGGGTCCAAACCACAAAGTAGAGATGGCAATGACTTCCCTGCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR CAA 90 bp TCATTTAATCCTCACAACAACCCTGTGAGGTGGGCAGGGAAGTCATaGCCATCTCTACTTTGTGGTTTGGACCCTGAACACAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: SFNPHNNPVRWAGKS*PSLLCGLDPEHRDF
Trigger: AAAGTCTCTGTGTTCAGGGTCCAAACCACAAAGTAGAGATGGCAATGACTTCCCTGCCCACCTCACAGGGTTGTTGTGAGGATTAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCTTCCTTGTCATTGCTaGGGTTGTATATCCACTTAC +
Preference number: 2 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLPCHC*GCISTY
Trigger: GTAAGTGGATATACAACCTCAGCAATGACAAGGAAG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTTCCTTGTCATTGCTaGGGTTGTATATCCACTTAC +
Preference number: 2 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVLPCHC*GCISTY
Trigger: GTAAGTGGATATACAACCTCAGCAATGACAAGGAAG...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR-3UTR CCA 90 bp GCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGATGCCTCTACTTTGTGGTTTaGACCCTGAACACAGAGACT +
Preference number: 2 (lower is better)
Translates to: ASFYAIEYFAVGKAFYRCLYFVV*TLNTET
Trigger: AGTCTCTGTGTTCAGGGTCCAAACCACAAAGTAGAG...GCATCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR-3UTR CAA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTaGTATATCCACTTACTCAGG +
Preference number: 3 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSLSLLR*YIHLLR
Trigger: CCTGAGTAAGTGGATATACAACCTCAGCAATGACAA...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR GCA 72 bp GACAATAGTCTCGTGCTCAGTACAGCACACAACTGGTaGACTGAAGTTGCATACATTATAGTGCAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: DNSLVLSTAHNW*TEVAYIIVQAA
Trigger: TGCTGCCTGCACTATAATGTATGCAACTTCAGTGCACCAGTTGTGTGCTGTACTGAGCACGAGACTATTGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTATTGTCATTGCTGAGGTaGTATATCCACTTACTCAGG +
Preference number: 3 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVLSLLR*YIHLLR
Trigger: CCTGAGTAAGTGGATATACAACCTCAGCAATGACAA...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTTTGTCATTGCTGAGGTaGTATATCCACTTACTCAGG +
Preference number: 3 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLSLLR*YIHLLR
Trigger: CCTGAGTAAGTGGATATACAACCTCAGCAATGACAA...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR CCA 72 bp AGAGACAATAGTCTCGTGCTCAGTACAGCACACAACTaGTGCACTGAAGTTGCATACATTATAGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: RDNSLVLSTAHN*CTEVAYIIVQA
Trigger: TGCCTGCACTATAATGTATGCAACTTCAGTGCACCAGTTGTGTGCTGTACTGAGCACGAGACTATTGTCTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR GCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAAGCTCTGGGCACAGCTaGTCGCCGTCCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQSSGHS*SPSSES
Trigger: GCTTTCCGAGGACGGCGAGCAGCTGTGCCCAGAGCT...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCGGGTGCTGCTGCTGCTaGGAGAGGGGATTCCACCAT +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSGCCCC*ERGFHH
Trigger: ATGGTGGAATCCCCTCTCTCAGCAGCAGCAGCACCC...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTGGGTGCTGCTGCTGCTaGGAGAGGGGATTCCACCAT +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFGCCCC*ERGFHH
Trigger: ATGGTGGAATCCCCTCTCTCAGCAGCAGCAGCACCC...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCGGGTGCTGCTGCTGCTaGGAGAGGGGATTCCACCAT +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSGCCCC*ERGFHH
Trigger: ATGGTGGAATCCCCTCTCTCAGCAGCAGCAGCACCC...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCGGCAGGAGAATGGCGTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSGRRMA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCACGCCATTCTCCTGCC...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR GCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAGGACAGGAAGGCTTCTaGATGGCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVGQEGF*MAGPHT
Trigger: CGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCC...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTGGACAGGAAGGCTTCTaGATGGCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLGQEGF*MAGPHT
Trigger: CGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCC...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAACTTTCCCAGAGCTCTaGGCACAGCTGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVTFPEL*AQLLAV
Trigger: GACGGCGAGCAGCTGTGCCCAGAGCTCTGGGAAAGT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR CAA 72 bp CCTCACAACAACCCTGTGAGGTGGGCAGGGAAGTCATaGCCATCTCTACTTTGTGGTTTGGACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: PHNNPVRWAGKS*PSLLCGLDPEH
Trigger: GTGTTCAGGGTCCAAACCACAAAGTAGAGATGGCAATGACTTCCCTGCCCACCTCACAGGGTTGTTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTACGCTCGCTCAGCTCTaGGACTCAGCTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLTLAQL*DSAHAA
Trigger: AGCAGCATGAGCTGAGTCTCAGAGCTGAGCGAGCGT...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAAGGAAGGCTTCTGCATaGCAGGTCCGCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPRKASA*QVRTRP
Trigger: TGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCT...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTATCCCTCCGGTACTTaGGCTCCTCAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSYPSGT*APQQQK
Trigger: CTTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATA...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTTATCCCTCCGGTACTTaGGCTCCTCAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTYPSGT*APQQQK
Trigger: CTTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATA...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTATCCCTCCGGTACTTaGGCTCCTCAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYYPSGT*APQQQK
Trigger: CTTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAGCTTTCCAGGGTGGATaGTGTCTGGTGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVAFQGG*CLVSGS
Trigger: ACTCCCAGACACCAGACATCATCCACCCTGGAAAGC...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTGCTTTCCAGGGTGGATaGTGTCTGGTGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFAFQGG*CLVSGS
Trigger: ACTCCCAGACACCAGACATCATCCACCCTGGAAAGC...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCGATAGACCCAGCTTCTaGTCTCTGACCCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSDRPSF*SLTLIG
Trigger: GCCTATGAGGGTCAGAGATCAGAAGCTGGGTCTATC...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCTTTCCTTTTCACCCTaGCGCTCGCTCAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLSFSP*RSLSSE
Trigger: CTCAGAGCTGAGCGAGCGTCAGGGTGAAAAGGAAAG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTAGGTGGAGGTTGCAATaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTRWRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCATTGCAACCTCCACCT...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR GCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCGTTGTCCTTGGAGAATaGTGTAAACCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSVVLGE*CKPPER
Trigger: GCGCTCGGGTGGTTTACAGCATTCTCCAAGGACAAC...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGGACAGGAAGGCTTCTaGATGGCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPGQEGF*MAGPHT
Trigger: CGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGCTCTGGGCACAGCTaGTCGCCGTCCTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSSGHS*SPSSES
Trigger: GCTTTCCGAGGACGGCGAGCAGCTGTGCCCAGAGCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAGGAAGGCTTCTGCATaGCAGGTCCGCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPRKASA*QVRTRP
Trigger: TGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCGCTGTGGTTGAGTCCTaGAGCGTGAAACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSAVVES*SVKLFL
Trigger: CAGGAACAGTTTCACGCTCCAGGACTCAACCACAGC...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCGGTTTCTCATCACCTTaGTGGAGCTGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFGFSSP*WSCGEQ
Trigger: CTGCTCACCACAGCTCCATCAAGGTGATGAGAAACC...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGGTTTCTCATCACCTTaGTGGAGCTGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTGFSSP*WSCGEQ
Trigger: CTGCTCACCACAGCTCCATCAAGGTGATGAGAAACC...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCGGTTTCTCATCACCTTaGTGGAGCTGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSGFSSP*WSCGEQ
Trigger: CTGCTCACCACAGCTCCATCAAGGTGATGAGAAACC...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCCCCCTTTTGGGACGATaGTGGACTTCGGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSPLLGR*WTSVSP
Trigger: AGGTGAAACCGAAGTCCATCATCGTCCCAAAAGGGG...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCGATTCCTCAAGGCTGTaGTGTCAAAGGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSDSSRL*CQRPLC
Trigger: ACACAGAGGCCTTTGACATCACAGCCTTGAGGAATC...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGATAGACCCAGCTTCTaGTCTCTGACCCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQDRPSF*SLTLIG
Trigger: GCCTATGAGGGTCAGAGATCAGAAGCTGGGTCTATC...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCGATAGACCCAGCTTCTaGTCTCTGACCCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFDRPSF*SLTLIG
Trigger: GCCTATGAGGGTCAGAGATCAGAAGCTGGGTCTATC...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCGTTGTCCTTGGAGAATaGTGTAAACCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFVVLGE*CKPPER
Trigger: GCGCTCGGGTGGTTTACAGCATTCTCCAAGGACAAC...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTGGACAGGAAGGCTTCTaGATGGCAGGTCCGCACACG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAGQEGF*MAGPHT
Trigger: CGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCC...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCCTGCTGTCACTCTGCTaGAGACACCATCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSLLSLC*RHHHLS
Trigger: GGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAG...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCCTGCTGTCACTCTGCTaGAGACACCATCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSLLSLC*RHHHLS
Trigger: GGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAG...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAGGAAGGCTTCTGCATaGCAGGTCCGCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKARKASA*QVRTRP
Trigger: TGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGAGGAAGGCTTCTGCATaGCAGGTCCGCACACGCCCA +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRRKASA*QVRTRP
Trigger: TGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCT...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACTTTCCCAGAGCTCTaGGCACAGCTGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKATFPEL*AQLLAV
Trigger: GACGGCGAGCAGCTGTGCCCAGAGCTCTGGGAAAGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACTTTCCCAGAGCTCTaGGCACAGCTGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTFPEL*AQLLAV
Trigger: GACGGCGAGCAGCTGTGCCCAGAGCTCTGGGAAAGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCAACAACCCTGTGAGGTaGGCAGGGAAGTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSNNPVR*AGKSLP
Trigger: TGGCAATGACTTCCCTGCCCACCTCACAGGGTTGTT...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACCCCTTTTGGGACGATaGTGGACTTCGGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPPLLGR*WTSVSP
Trigger: AGGTGAAACCGAAGTCCATCATCGTCCCAAAAGGGG...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCCTTCATCATCATAGGTaGCCACGTTCTCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSLHHHR*PRSPVH
Trigger: ATGTACGGGAGAACGTGGTCACCTATGATGATGAAG...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCGATTCCTCAAGGCTGTaGTGTCAAAGGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFDSSRL*CQRPLC
Trigger: ACACAGAGGCCTTTGACATCACAGCCTTGAGGAATC...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCACATATTGCTGTGGTTaGGTCCTGGAGCGTGAAACT +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSTYCCG*VLERET
Trigger: AGTTTCACGCTCCAGGACTCAACCACAGCAATATGT...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR GCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCCTATCTTGGCGGACTTaGCCTAACTGGTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFLSWRT*PNWWKG
Trigger: TCCTTTCCACCAGTTAGGGCAAGTCCGCCAAGATAG...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAACTATGCTTTCCAGGGTaGATGATGTCTGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQLCFPG*MMSGVW
Trigger: CCAGACACCAGACATCATCCACCCTGGAAAGCATAG...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCCTCTTCAGTCTATCTTaGCGGACTTGCCCTAACTGG +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSLFSLS*RTCPNW
Trigger: CCAGTTAGGGCAAGTCCGCCAAGATAGACTGAAGAG...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTTCAGTCTATCCTaGCGTGGTGGCGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLLFSLS*RGGGRL
Trigger: CAGGCGCCCGCCACCACGCCAGGATAGACTGAAGAG...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGGTTTCTCATCACCTTaGTGGAGCTGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPGFSSP*WSCGEQ
Trigger: CTGCTCACCACAGCTCCATCAAGGTGATGAGAAACC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCCCCTTTTGGGACGATaGTGGACTTCGGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPPLLGR*WTSVSP
Trigger: AGGTGAAACCGAAGTCCATCATCGTCCCAAAAGGGG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCGGTCATGTCAGCATTTaGGCCAGTGTCAGCATCATT +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFGHVSI*ASVSII
Trigger: AATGATGCTGACACTGGCTCAAATGCTGACATGACC...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCGGTCATGTCAGCATTTaGGCCAGTGTCAGCATCATT +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSGHVSI*ASVSII
Trigger: AATGATGCTGACACTGGCTCAAATGCTGACATGACC...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCCCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTTCATCATCATAGGTaGCCACGTTCTCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLLHHHR*PRSPVH
Trigger: ATGTACGGGAGAACGTGGTCACCTATGATGATGAAG...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCTTCATCATCATAGGTaGCCACGTTCTCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLHHHR*PRSPVH
Trigger: ATGTACGGGAGAACGTGGTCACCTATGATGATGAAG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAGATTCCTCAAGGCTGTaGTGTCAAAGGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPDSSRL*CQRPLC
Trigger: ACACAGAGGCCTTTGACATCACAGCCTTGAGGAATC...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACGCTTTCCAGGGTGGATaGTGTCTGGTGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GCISTYSGSKFHKVARTDAFQGG*CLVSGS
Trigger: ACTCCCAGACACCAGACATCATCCACCCTGGAAAGC...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGGCTGGAGCTCAGAGCTaGCATCCTCTTGTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKAGAQS*HPLVKR
Trigger: TCTTTTTACAAGAGGATGTCAGCTCTGAGCTCCAGC...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR TCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATTGAGTCCTGGAGCGTaGAACTGTTCCTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQLSPGA*NCSCSM
Trigger: CATTGAACAGGAACAGTTTCACGCTCCAGGACTCAA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR GCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTTGTCCTTGGAGAATaGTGTAAACCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPVVLGE*CKPPER
Trigger: GCGCTCGGGTGGTTTACAGCATTCTCCAAGGACAAC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCGGCAGCAAATCCCCATaGTCCATCAGTTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSGSKSP*SISFVW
Trigger: CCATACAAAACTGATGGAGCATGGGGATTTGCTGCC...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAACGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQRRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKCLACP*FNCPSG
Trigger: CCCTGATGGACAGTTAAATCATGGACACGCTAAACA...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCTGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSCLACP*FNCPSG
Trigger: CCCTGATGGACAGTTAAATCATGGACACGCTAAACA...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGGTTTCTCATCACCTTaGTGGAGCTGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLGFSSP*WSCGEQ
Trigger: CTGCTCACCACAGCTCCATCAAGGTGATGAGAAACC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCCCTTTTGGGACGATaGTGGACTTCGGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAPLLGR*WTSVSP
Trigger: AGGTGAAACCGAAGTCCATCATCGTCCCAAAAGGGG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACCCCTTTTGGGACGATaGTGGACTTCGGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLPLLGR*WTSVSP
Trigger: AGGTGAAACCGAAGTCCATCATCGTCCCAAAAGGGG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFRGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFRGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKADCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAGGTCATGTCAGCATTTaGGCCAGTGTCAGCATCATT +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPGHVSI*ASVSII
Trigger: AATGATGCTGACACTGGCTCAAATGCTGACATGACC...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTTGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCCATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSHCPSE*SLDLQA
Trigger: TGCCTGTAAATCCAAACTTCACTCTGAAGGACAATG...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACCCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCAAGGTTGCAAGAACTaGCCCCCTAAGTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFQGCKN*PPKLFF
Trigger: AAAGAACAACTTAGGGGGTCAGTTCTTGCAACCTTG...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCCAAGGTTGCAAGAACTaGCCCCCTAAGTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSQGCKN*PPKLFF
Trigger: AAAGAACAACTTAGGGGGTCAGTTCTTGCAACCTTG...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACCAAGGTTGCAAGAACTaGCCCCCTAAGTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYQGCKN*PPKLFF
Trigger: AAAGAACAACTTAGGGGGTCAGTTCTTGCAACCTTG...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAGTTGTCCTTGGAGAATaGTGTAAACCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVVVLGE*CKPPER
Trigger: GCGCTCGGGTGGTTTACAGCATTCTCCAAGGACAAC...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGTTGTCCTTGGAGAATaGTGTAAACCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLVVLGE*CKPPER
Trigger: GCGCTCGGGTGGTTTACAGCATTCTCCAAGGACAAC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR GCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFTVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCTCCGCCTTGTCAGAATaGTGGCTGTGTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSSALSE*WLCYLH
Trigger: ATGAAGATAACACAGCCAGCATTCTGACAAGGCGGA...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTCCGCCTTGTCAGAATaGTGGCTGTGTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLSALSE*WLCYLH
Trigger: ATGAAGATAACACAGCCAGCATTCTGACAAGGCGGA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTCCGCCTTGTCAGAATaGTGGCTGTGTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKSALSE*WLCYLH
Trigger: ATGAAGATAACACAGCCAGCATTCTGACAAGGCGGA...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTGCTGTCACTCTGCTaGAGACACCATCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKALLSLC*RHHHLS
Trigger: GGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR GCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACAACCTTGGCGGACTTaGCCTAACTGGTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLQPWRT*PNWWKG
Trigger: TCCTTTCCACCAGTTAGGGCAAGTCCGCCAAGGTTG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACCTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYLQSEV*IYRQAF
Trigger: GAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAG...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGCTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKLQSEV*IYRQAF
Trigger: GAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAG...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCGCCTTGTCAGAATGCTaGCTGTGTTATCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSALSEC*LCYLHC
Trigger: ACAATGAAGATAACACAGCCAGCATTCTGACAAGGC...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCTCTTCAGTCTATCTTaGCGGACTTGCCCTAACTGG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPLFSLS*RTCPNW
Trigger: CCAGTTAGGGCAAGTCCGCCAAGATAGACTGAAGAG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR CCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATCTCCCCAGAATTCTTaGGATAGATCTGTAACTGGC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQSPQNS*DRSVTG
Trigger: GCCAGTTACAGATCTATCCCAAGAATTCTGGGGAGA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTCTCCCCAGAATTCTTaGGATAGATCTGTAACTGGC +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFSPQNS*DRSVTG
Trigger: GCCAGTTACAGATCTATCCCAAGAATTCTGGGGAGA...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCAGTACAGCACACAACTaGTGCACTGAAGTTGCATAC +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFSTAHN*CTEVAY
Trigger: GTATGCAACTTCAGTGCACCAGTTGTGTGCTGTACT...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCCTCTACTTTGTGGTTTaGACCCTGAACACAGAGACT +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSLYFVV*TLNTET
Trigger: AGTCTCTGTGTTCAGGGTCCAAACCACAAAGTAGAG...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
3UTR CAA 72 bp TGGGCAGGGAAGTCATTGCCATCTCTACTTTGTGGTTaGGACCCTGAACACAGAGACTTTCGGAAACATATC +
Preference number: 4 (lower is better)
Translates to: WAGKSLPSLLCG*DPEHRDFRKHI
Trigger: GATATGTTTCCGAAAGTCTCTGTGTTCAGGGTCCAAACCACAAAGTAGAGATGGCAATGACTTCCCTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTGTATGGTCCATCTGTaGATTTTGGAGCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSCMVHL*ILERCH
Trigger: ATGACAACGCTCCAAAATTCACAGATGGACCATACA...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTATGTATGGTCCATCTGTaGATTTTGGAGCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVCMVHL*ILERCH
Trigger: ATGACAACGCTCCAAAATTCACAGATGGACCATACA...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTGTCTTTGGCTTGAATaGCTACGGAGTAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFCLWLE*LRSNVL
Trigger: GAGAACATTACTCCGTAGTCATTCAAGCCAAAGACA...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTGTCTTTGGCTTGAATaGCTACGGAGTAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLCLWLE*LRSNVL
Trigger: GAGAACATTACTCCGTAGTCATTCAAGCCAAAGACA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGGTCATGTCAGCATTTaGGCCAGTGTCAGCATCATT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPGHVSI*ASVSII
Trigger: AATGATGCTGACACTGGCTCAAATGCTGACATGACC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCCATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFHCPSE*SLDLQA
Trigger: TGCCTGTAAATCCAAACTTCACTCTGAAGGACAATG...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFHCPSE*SLDLQA
Trigger: TGCCTGTAAATCCAAACTTCACTCTGAAGGACAATG...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCTTCATCATCATAGGTaGCCACGTTCTCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPLHHHR*PRSPVH
Trigger: ATGTACGGGAGAACGTGGTCACCTATGATGATGAAG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAACTTCCTTGTCATTGCTaGGGTTGTATATCCACTTAC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQLPCHC*GCISTY
Trigger: GTAAGTGGATATACAACCTCAGCAATGACAAGGAAG...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCCTTCCTTGTCATTGCTaGGGTTGTATATCCACTTAC +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSLPCHC*GCISTY
Trigger: GTAAGTGGATATACAACCTCAGCAATGACAAGGAAG...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTACCCAGTTTCGATCATaGAAAGGGCACTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLTQFRS*KGHLFL
Trigger: TAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGT...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACACCCAGTTTCGATCATaGAAAGGGCACTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYTQFRS*KGHLFL
Trigger: TAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGT...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTATTCCTGAACATCTATaGTTTCCAGGGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFIPEHL*FPGWMM
Trigger: CATCATCCACCCTGGAAAGCATAGATGTTCAGGAAT...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCATTCCTGAACATCTATaGTTTCCAGGGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFIPEHL*FPGWMM
Trigger: CATCATCCACCCTGGAAAGCATAGATGTTCAGGAAT...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTATCTTGGCGGACTTaGCCTAACTGGTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKALSWRT*PNWWKG
Trigger: TCCTTTCCACCAGTTAGGGCAAGTCCGCCAAGATAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR GCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAACAGCACACAACTGGTaGACTGAAGTTGCATACATT +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQTAHNW*TEVAYI
Trigger: AATGTATGCAACTTCAGTGCACCAGTTGTGTGCTGT...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR GCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCTGAGACTCAGCTCATaGTGCTGCTGTATAATCAAT +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFLRLSS*CCCIIN
Trigger: ATTGATTATACAGCAGCAGCATGAGCTGAGTCTCAG...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CCA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCACCTTTGTCAGAATTaGAGTGCAGCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LQELCPASSVPSTVSTLLHLCQN*SAAFQH
Trigger: ATGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTG...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCACCTTTGTCAGAATTaGAGTGCAGCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: KGHLFLQELCPASSVPSTHLCQN*SAAFQH
Trigger: ATGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCTCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCTGTGATGTTGTACCATaGAGTTTCTTCTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSCDVVP*SFFSVE
Trigger: CTCGACAGAGAAGAAACTCCATGGTACAACATCACA...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTGATGTTGTACCATaGAGTTTCTTCTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYCDVVP*SFFSVE
Trigger: CTCGACAGAGAAGAAACTCCATGGTACAACATCACA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCGCCTTGTCAGAATGCTaGCTGTGTTATCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFALSEC*LCYLHC
Trigger: ACAATGAAGATAACACAGCCAGCATTCTGACAAGGC...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACGCCTTGTCAGAATGCTaGCTGTGTTATCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYALSEC*LCYLHC
Trigger: ACAATGAAGATAACACAGCCAGCATTCTGACAAGGC...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGCTATGCTTTCCAGGGTaGATGATGTCTGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRLCFPG*MMSGVW
Trigger: CCAGACACCAGACATCATCCACCCTGGAAAGCATAG...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTACTCTTCACAGTAGTTaGACACAAGCAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFTLHSS*TQATIF
Trigger: GAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGT...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCACTCTTCACAGTAGTTaGACACAAGCAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSTLHSS*TQATIF
Trigger: GAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGT...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGGTCATGTCAGCATTTaGGCCAGTGTCAGCATCATT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLGHVSI*ASVSII
Trigger: AATGATGCTGACACTGGCTCAAATGCTGACATGACC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACTTCATCATCATAGGTaGCCACGTTCTCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVLHHHR*PRSPVH
Trigger: ATGTACGGGAGAACGTGGTCACCTATGATGATGAAG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAACCCAGTTTCGATCATaGAAAGGGCACTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPTQFRS*KGHLFL
Trigger: TAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGT...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAACACAACTGGTGCACTaGAGTTGCATACATTATAGT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVTQLVH*SCIHYS
Trigger: ACTATAATGTATGCAACTTCAGTGCACCAGTTGTGT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTATAAGTGAATTAGACTaGAGTACAAACCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFISELD*STNQPA
Trigger: TGCTGGCTGGTTTGTACTTCAGTCTAATTCACTTAT...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTGCTGCTGCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPCCCNF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGCAGCAGCA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515257.6
CDS-3UTR GCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPTVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACCCATCTCTCTCGCATaGACAAACCCTGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLPISLA*TNPDGE
Trigger: CTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGG...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAGACTCAGCTCATGCTaGTGCTGTATAATCAATCTA +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSRLSSC*CCIINL
Trigger: TAGATTGATTATACAGCAGCAGCATGAGCTGAGTCT...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPRLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTGGTCTCTTTGTCAGTaGAGATTGAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKWSLCQ*RLRIFP
Trigger: TGGGAATATTCTCAATCTCCACTGACAAAGAGACCA...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATGGTCTCTTTGTCAGTaGAGATTGAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQWSLCQ*RLRIFP
Trigger: TGGGAATATTCTCAATCTCCACTGACAAAGAGACCA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACCGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: GCISTYSGSKFHKVARTDRRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVRRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLRRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKARRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTCTCCCCAGAATTCTTaGGATAGATCTGTAACTGGC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSPQNS*DRSVTG
Trigger: GCCAGTTACAGATCTATCCCAAGAATTCTGGGGAGA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATACTGGGCTCAGAATTaGACCCTGAATAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVYWAQN*TLNKAS
Trigger: GCTGGCTTTATTCAGGGTCCAATTCTGAGCCCAGTA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506372.5
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAACCATTTTCAACCTTaGCGGACTTGCCCTAACTGG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLNHFQP*RTCPNW
Trigger: CCAGTTAGGGCAAGTCCGCCAAGGTTGAAAATGGTT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKACLACP*FNCPSG
Trigger: CCCTGATGGACAGTTAAATCATGGACACGCTAAACA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCLACP*FNCPSG
Trigger: CCCTGATGGACAGTTAAATCATGGACACGCTAAACA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKASFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAGCTTTCCAACATACTaGGGATCTGGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSFPTY*GSGPIC
Trigger: ACATATGGGACCAGATCCTCAGTATGTTGGAAAGCT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTGTATGGTCCATCTGTaGATTTTGGAGCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPCMVHL*ILERCH
Trigger: ATGACAACGCTCCAAAATTCACAGATGGACCATACA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: GCISTYSGSKFHKVARTDRGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVRGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKARGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGAGGTACCCATATCTaGCATTTCAGGCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLRGTHI*HFRHSN
Trigger: GTTACTGTGCCTGAAATGTCAGATATGGGTACCTCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp GCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGATGCGACTGTTGTAGATCCTaGAAGCCCTCCAACTTGCCC +
Preference number: 4 (lower is better)
Translates to: ASFYAIEYFAVGKAFYRCDCCRS*KPSNLP
Trigger: GGGCAAGTTGGAGGGCTTTCAGGATCTACAACAGTC...GCATCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKATAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLFRRLP*GRKAWK
Trigger: TTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAGTGGCACTGATGGTATaGATAACCTGGCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLVALMV*ITWPGL
Trigger: TAAGCCTGGCCAGGTTATTCATACCATCAGTGCCAC...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPHCPSE*SLDLQA
Trigger: TGCCTGTAAATCCAAACTTCACTCTGAAGGACAATG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTGCTTAATAAATTCCTaGACATCTATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFCLINS*TSMLSR
Trigger: CCTGGAAAGCATAGATGTTCAGGAATTTATTAAGCA...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTCAGAATTGGACCCTaGATAAAGCCAGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKALRIGP*IKPADN
Trigger: ATTGTCAGCTGGCTTTATTCAGGGTCCAATTCTGAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506372.5
CDS-3UTR GCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVTVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR GCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKATVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCACCTTTGTCAGAATTaGAGTGCAGCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPHLCQN*SAAFQH
Trigger: ATGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKARLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLRLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGCACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCCGACGGTCCCAATCTTaGCATTTTCGTAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLRRSQS*HFRRLP
Trigger: TGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCG...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTGTGATGTTGTACCATaGAGTTTCTTCTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPCDVVP*SFFSVE
Trigger: CTCGACAGAGAAGAAACTCCATGGTACAACATCACA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKALQSEV*IYRQAF
Trigger: GAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLLQSEV*IYRQAF
Trigger: GAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTATAATAACAGAGTGTaGTTCTCAAGGTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFYNNRV*FSRFHP
Trigger: TGGGTGAAACCTTGAGAACCACACTCTGTTATTATA...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCACTTCAGGAATGTTTaGTGTGTGTTCTTCTTACAT +
Preference number: 4 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFHFRNV*CVFFLH
Trigger: ATGTAAGAAGAACACACACCAAACATTCCTGAAGTG...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR TCA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: GCISTYSGSKFHKVARTDKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATGTATGGTCCATCTGTaGATTTTGGAGCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVCMVHL*ILERCH
Trigger: ATGACAACGCTCCAAAATTCACAGATGGACCATACA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGTATGGTCCATCTGTaGATTTTGGAGCGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCMVHL*ILERCH
Trigger: ATGACAACGCTCCAAAATTCACAGATGGACCATACA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTGTCTTTGGCTTGAATaGCTACGGAGTAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKACLWLE*LRSNVL
Trigger: GAGAACATTACTCCGTAGTCATTCAAGCCAAAGACA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGTCTTTGGCTTGAATaGCTACGGAGTAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCLWLE*LRSNVL
Trigger: GAGAACATTACTCCGTAGTCATTCAAGCCAAAGACA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTGCCATCACCATTTATaGTGGAGTAGGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLCHHHL*WSRSCQ
Trigger: CTGACATGACCTACTCCATCATAAATGGTGATGGCA...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGTTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLHCPSE*SLDLQA
Trigger: TGCCTGTAAATCCAAACTTCACTCTGAAGGACAATG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGCTTCCTTGTCATTGCTaGGGTTGTATATCCACTTAC +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRLPCHC*GCISTY
Trigger: GTAAGTGGATATACAACCTCAGCAATGACAAGGAAG...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAACCACTTTCCTTATTaGCTTGGAGAGCACTGCATA +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKANHFPY*LGEHCI
Trigger: TATGCAGTGCTCTCCAAGTCAATAAGGAAAGTGGTT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506372.5
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACACCTTTGTCAGAATTaGAGTGCAGCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLHLCQN*SAAFQH
Trigger: ATGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCACCTTTGTCAGAATTaGAGTGCAGCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAHLCQN*SAAFQH
Trigger: ATGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLRLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTGTGATGTTGTACCATaGAGTTTCTTCTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKACDVVP*SFFSVE
Trigger: CTCGACAGAGAAGAAACTCCATGGTACAACATCACA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGTGATGTTGTACCATaGAGTTTCTTCTCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCDVVP*SFFSVE
Trigger: CTCGACAGAGAAGAAACTCCATGGTACAACATCACA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp GGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: GTCFYRSCVQLPQFQVLFKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...AAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: HLFLQELCPASSVPSTVSKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAACTCTTCACAGTAGTTaGACACAAGCAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVTLHSS*TQATIF
Trigger: GAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACTCTTCACAGTAGTTaGACACAAGCAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTLHSS*TQATIF
Trigger: GAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACAGCATCATTTGCCTTaGTTTTCCCAACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLQHHLP*FSQQLN
Trigger: GTTCAGCTGTTGGGAAAATCAAGGCAAATGATGCTG...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGAGGACCATTATGGTATaGATTCTTACTTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRRTIMV*ILTSRP
Trigger: TGGCCTTGAAGTAAGAATTCATACCATAATGGTCCT...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTTTAGATTCTGCTGGTaGAGTACATTAGATGACTGC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAFRFCW*STLDDC
Trigger: GCAGTCATCTAATGTACTTCACCAGCAGAATCTAAA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506372.5
CDS-3UTR GCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAACTGTCAGGATCTTGTaGCAAAACTGTACCAACGAC +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLTVRIL*QNCTND
Trigger: GTCGTTGGTACAGTTTTGGCACAAGATCCTGACAGT...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLRLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKASICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATGGTCTCTTTGTCAGTaGAGATTGAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVWSLCQ*RLRIFP
Trigger: TGGGAATATTCTCAATCTCCACTGACAAAGAGACCA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGGTCTCTTTGTCAGTaGAGATTGAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLWSLCQ*RLRIFP
Trigger: TGGGAATATTCTCAATCTCCACTGACAAAGAGACCA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLLQSEV*IYRQAF
Trigger: GAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAG...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACACTATGCTTTCCAGGGTaGATGATGTCTGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTLCFPG*MMSGVW
Trigger: CCAGACACCAGACATCATCCACCCTGGAAAGCATAG...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCACTCTTCACAGTAGTTaGACACAAGCAACCATTTTC +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLTLHSS*TQATIF
Trigger: GAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGT...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp GCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGATGCTGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ASFYAIEYFAVGKAFYRCCLACP*FNCPSG
Trigger: CCCTGATGGACAGTTAAATCATGGACACGCTAAACA...GCATCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTATTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKALLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR TCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR TCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR GCA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GCISTYSGSKFHKVARTDIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR GCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAATCAAGATGTGTATTTaGTCCTTCTATGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVIKMCI*SFYVEG
Trigger: ACCCTCAACATAGAAGGAGCAAATACACATCTTGAT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR GCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAATTCCTGAACATCTATaGTTTCCAGGGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLIPEHL*FPGWMM
Trigger: CATCATCCACCCTGGAAAGCATAGATGTTCAGGAAT...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTCCATCTGTGAATTTTaGAGCGTTGTCATTGATGTC +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLSICEF*SVVIDV
Trigger: GACATCAATGACAACGCTCCAAAATTCACAGATGGA...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGCACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACACAGTAACAATGTATaGTCCATCTGTGAATTTTGG +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVHSNNV*SICEFW
Trigger: CCAAAATTCACAGATGGACCATACATTGTTACTGTG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CCA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTGGTCTCTTTGTCAGTaGAGATTGAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLWSLCQ*RLRIFP
Trigger: TGGGAATATTCTCAATCTCCACTGACAAAGAGACCA...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR CAA 72 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTaGTATATCCACTTACTCAGGAAGCAAATTCCACAA +
Preference number: 4 (lower is better)
Translates to: YCFHTSSLSLLR*YIHLLRKQIPQ
Trigger: TTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAACAGCTGAACCAACTTaGGCTGACTCAGGAACATAT +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTTAEPT*ADSGTY
Trigger: ATATGTTCCTGAGTCAGCTCAAGTTGGTTCAGCTGT...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACACCGTACATCCTCTTCTaGAATGATCAAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTPYILF*NDQGLF
Trigger: AAAGAGCCCTTGATCATTTCAGAAGAGGATGTACGG...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR GCA 90 bp TCTGCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGAGAGACAATAGTCTCGTaGTCAGTACAGCACACAACT +
Preference number: 4 (lower is better)
Translates to: SASFYAIEYFAVGKAFYRETIVS*SVQHTT
Trigger: AGTTGTGTGCTGTACTGAGCACGAGACTATTGTCTC...TCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR GCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACACCCTGTTTCTGTTCTTaGTCCTCTTCAGTCTATCCT +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTPCFCS*SSSVYP
Trigger: AGGATAGACTGAAGAGGAGCAAGAACAGAAACAGGG...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CCA 90 bp TCTGCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGAAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: SASFYAIEYFAVGKAFYRRLFVE*ISPVVS
Trigger: CGATACCACGGGTGATATCCACTCAACAAAAAGCCT...TCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CCA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: STTIARRMRTQRRIAIKAKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CCA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CCA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAAAGAAGTTAAACCTTaGTCCATTGGCAAAATCATC +
Preference number: 4 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLKEVKP*SIGKII
Trigger: GATGATTTTGCCAATGGACCAAGGTTTAACTTCTTT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR TCA 90 bp TCTGCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGAAAAGCCGTAGTTGTCTaGTTCCAACTCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: SASFYAIEYFAVGKAFYRKAVVV*FQLFTV
Trigger: TACTGTGAAGAGTTGGAATCAGACAACTACGGCTTT...TCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACATGTCTTTGGCTTGAATaGCTACGGAGTAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTCLWLE*LRSNVL
Trigger: GAGAACATTACTCCGTAGTCATTCAAGCCAAAGACA...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACATTTGTCAGTGGAGATTaGGAATATTCCCATGCCATC +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTFVSGD*EYSHAI
Trigger: GATGGCATGGGAATATTCTCAATCTCCACTGACAAA...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTATTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR TCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAAGGATTATCAATTTCTaGAGCAGTGACTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLRIINF*SSDCDV
Trigger: AACATCACAGTCACTGCTTCAGAAATTGATAATCCT...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CCA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAGACATTTACGTTCATTaGAGGATAGTCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLDIYVH*RIVFQT
Trigger: AGTCTGAAAGACTATCCTCCAATGAACGTAAATGTC...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp TTCACCCAGAAAAGTGATAAAAGAGGTTGTGATTACCTTCACAAGTTTCCTGTATTGCTCCTTCTATGTTaGGGGTATATGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FTQKSDKRGCDYLHKFPVLLLLC*GYMTSF
Trigger: AAAAGAAGTCATATACCCTCAACATAGAAGGAGCAA...TACAGGAAACTTGTGAAGGTAATCACAACCTCTTTTATCACTTTTCTGGGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp GCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGATGCTGCTTAATAAATTCCTaGACATCTATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASFYAIEYFAVGKAFYRCCLINS*TSMLSR
Trigger: CCTGGAAAGCATAGATGTTCAGGAATTTATTAAGCA...GCATCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR TCA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACATGCTTAATAAATTCCTaGACATCTATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTCLINS*TSMLSR
Trigger: CCTGGAAAGCATAGATGTTCAGGAATTTATTAAGCA...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
3UTR CAA 72 bp GTTCATTGGAGGATAGTCTTTCAGACTACATTGTTATaGTGTGAGGTACTTATTTTTAATTACTGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: VHWRIVFQTTLL*CEVLIFNYCSC
Trigger: ACACGAGCAGTAATTAAAAATAAGTACCTCACACAATAACAATGTAGTCTGAAAGACTATCCTCCAATGAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS CCA 90 bp AAGGCTCCTGTACTCAAACCAGCCGAGGACAGGAAGGCTTCTGCATaGCAGGTCCGCACACGCCCATCTCTCTCGCATGCACAAACCCTG +
Preference number: 5 (lower is better)
Translates to: KAPVLKPAEDRKASA*QVRTRPSLSHAQTL
Trigger: CAGGGTTTGTGCATGCGAGAGAGATGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCCTCGGCTGGTTTGAGTACAGGAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000515257.6
CDS GCA 90 bp GAAGGCTTCTGCATGGCAGGTCCGCACACGCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAGGGTGCTGCTGCTTCATTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: EGFCMAGPHTPISLA*TNPDGEGAAASLSF
Trigger: GAAGGACAATGAAGCAGCAGCACCCTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS CCA 90 bp TATCGGGTACAAGCAGTCACAGTAGTGATGCTATGGAACGTGCACTaGCTTCCTCCCCACCTTGTGTTCCTCTCTCTCTCTCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: YRVQAVTVVMLWNVH*LPPHLVFLSLSLSP
Trigger: CGGGGAGAGAGAGAGAGAGAGGAACACAAGGTGGGGAGGAAGCCAGTGCACGTTCCATAGCATCACTACTGTGACTGCTTGTACCCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507632.2
ENST00000507958.5
CDS CCA 90 bp AACTTAATTTATAAGAAGCAAAGAGAGGGGACTTTCCCAGAGCTCTaGGCACAGCTGCTCGCCGTCCTCGGAAAGCCCAGACTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NLIYKKQREGTFPEL*AQLLAVLGKPRLRL
Trigger: GAGCCTGAGTCTGGGCTTTCCGAGGACGGCGAGCAGCTGTGCCCAGAGCTCTGGGAAAGTCCCCTCTCTTTGCTTCTTATAAATTAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS CCA 90 bp GCAGAGCAAGATTATCGGGTACAAGCAGTCACAGTAGTGATGCTATaGAACGTGCACTGGCTTCCTCCCCACCTTGTGTTCCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AEQDYRVQAVTVVML*NVHWLPPHLVFLSL
Trigger: GAGAGAGAGGAACACAAGGTGGGGAGGAAGCCAGTGCACGTTCCATAGCATCACTACTGTGACTGCTTGTACCCGATAATCTTGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507632.2
ENST00000507958.5
CDS CCA 90 bp TGCTGTCACTCTGCTGCAGACACCATCATCTCTCCCCAGAATTCTTaGGATAGATCTGTAACTGGCTCCCTGTTTCTGTTCTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: CCHSAADTIISPQNS*DRSVTGSLFLFLLL
Trigger: GAGGAGCAAGAACAGAAACAGGGAGCCAGTTACAGATCTATCCCAAGAATTCTGGGGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382275.6
ENST00000502796.5
ENST00000503132.1
ENST00000507958.5
ENST00000511423.5
CDS-3UTR CAA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAATATCCCTCCGGTACTaGAGCTCCTCAGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVISLRY*SSSAAE
Trigger: TTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATAT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCATATCCCTCCGGTACTaGAGCTCCTCAGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFISLRY*SSSAAE
Trigger: TTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATAT...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTAGGCACCTCAGTAAGTaGTTCACTGAGGGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTRHLSK*FTEGAA
Trigger: TGCAGCTCCCTCAGTGAACAACTTACTGAGGTGCCT...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGGGCTTCCTCCCCACCTaGTGTTCCTCTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRGFLPT*CSSLSL
Trigger: GAGAGAGAGAGAGGAACACAAGGTGGGGAGGAAGCC...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS TCA 90 bp CTGTACCAACGACGGTCCCAATCTTGGCATTTTCGTAGACTTCCATaGGGTAGGAAGGCATGGAAAATAGTGGTGGTTCATCTACATCCC +
Preference number: 5 (lower is better)
Translates to: LYQRRSQSWHFRRLP*GRKAWKIVVVHLHP
Trigger: GGGATGTAGATGAACCACCACTATTTTCCATGCCTTCCTACCTCATGGAAGTCTACGAAAATGCCAAGATTGGGACCGTCGTTGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYTDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVTDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQCLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFCLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: LQELCPASSVPSTVSTLLCLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCCTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSLCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGAAGTCTGTTATTTCTaGCTGGAGCTCAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQEVCYF*LELRAD
Trigger: GTCAGCTCTGAGCTCCAGCAAGAAATAACAGACTTC...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS-3UTR CAA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCTCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSSPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTTCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTTCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: LQELCPASSVPSTVSTLLSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTSHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFSHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LQELCPASSVPSTVSTLLPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCCCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: LQELCPASSVPSTVSTLLSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LQELCPASSVPSTVSTLLAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...AAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCCTCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: TGAVSSFLSSKYCFHTSSSGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...GGAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYSPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPCLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPLCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKTSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSTSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYTSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAATCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: HEKGTCFYRSCVQLPQFQSVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...TTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYSVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCTTTGTCAGTGGAGATaGAGAATATTCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: KGHLFLQELCPASSVPSTLCQWR*RIFPCH
Trigger: ATGGCATGGGAATATTCTCAATCTCCACTGACAAAG...AGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCAAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCTCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: HLFLQELCPASSVPSTVSSGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKAIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAATCAAGGGCTCTTTTTaGCTGCGCCTCAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVIKGSF*LRLRVI
Trigger: TATCACCCTGAGGCGCAGCAAAAAAGAGCCCTTGAT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCATATCCCTCCGGTACTaGAGCTCCTCAGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLISLRY*SSSAAE
Trigger: TTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATAT...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTTGTCATTGCTGAGGTaGTATATCCACTTACTCAGG +
Preference number: 5 (lower is better)
Translates to: MKRALVSTGAVSSFLSSKLSLLR*YIHLLR
Trigger: CCTGAGTAAGTGGATATACAACCTCAGCAATGACAA...CTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVTDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKATDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLCLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTGTCTAGGCTTTTTGTaGAGTGGATATCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKACLGFL*SGYHPW
Trigger: CCACGGGTGATATCCACTCAACAAAAAGCCTAGACA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKALCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLLCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYSGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: NPVSIMKRALVSTGAVSSSGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...GCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACTTTGTCAGTGGAGATaGAGAATATTCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPLCQWR*RIFPCH
Trigger: ATGGCATGGGAATATTCTCAATCTCCACTGACAAAG...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCGCTGTGTTATCTTCATaGTCCTTCAGAGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: IMKRALVSTGAVSSFLSSAVLSS*SFRVKF
Trigger: AAACTTCACTCTGAAGGACAATGAAGATAACACAGC...GGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTAGCTGTGTTATCTTCATaGTCCTTCAGAGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVAVLSS*SFRVKF
Trigger: AAACTTCACTCTGAAGGACAATGAAGATAACACAGC...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCGCTGTGTTATCTTCATaGTCCTTCAGAGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: HLFLQELCPASSVPSTVSAVLSS*SFRVKF
Trigger: AAACTTCACTCTGAAGGACAATGAAGATAACACAGC...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACAAAGTTCCCCAACATTaGGTAGAAGATAAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: KRALVSTGAVSSFLSSKYKVPQH*VEDKVC
Trigger: ACACACCTTATCTTCTACCAAATGTTGGGGAACTTT...GTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAGGTGCTGCTGCTTCATaGTCCTTCAGAGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVGAAAS*SFRVKF
Trigger: AAACTTCACTCTGAAGGACAATGAAGCAGCAGCACC...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR CAA 90 bp TACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCTCACTTCAGGAATGTTaGGTGTGTGTTCTTCTTACA +
Preference number: 5 (lower is better)
Translates to: YRSCVQLPQFQVLFPHFFSLQEC*VCVLLT
Trigger: TGTAAGAAGAACACACACCAAACATTCCTGAAGTGA...GAAGAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507958.5
CDS TCA 90 bp CTTTGTCAGTGGAGATTGAGAATATTCCCATGCCATCACCATTTATaGTGGAGTAGGTCATGTCAGCATTTGAGCCAGTGTCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: LCQWRLRIFPCHHHL*WSRSCQHLSQCQHH
Trigger: ATGATGCTGACACTGGCTCAAATGCTGACATGACCTACTCCATCATAAATGGTGATGGCATGGGAATATTCTCAATCTCCACTGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS TCA 90 bp TCTTTGCTTAATAAATTCCTGAACATCTATGCTTTCCAGGGTGGATaGTGTCTGGTGTCTGGGAGTGAGCTTCACTTCAGGTCTGATATC +
Preference number: 5 (lower is better)
Translates to: SLLNKFLNIYAFQGG*CLVSGSELHFRSDI
Trigger: GATATCAGACCTGAAGTGAAGCTCACTCCCAGACACCAGACATCATCCACCCTGGAAAGCATAGATGTTCAGGAATTTATTAAGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
ENST00000510297.1
CDS TCA 90 bp GAAAATCAAAGCCGTAGTTGTCTGATTCCAACTCTTCACAGTAGTTaGACACAAGCAACCATTTTCAACCTTGGCGGACTTGCCCTAACT +
Preference number: 5 (lower is better)
Translates to: ENQSRSCLIPTLHSS*TQATIFNLGGLALT
Trigger: AGTTAGGGCAAGTCCGCCAAGGTTGAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGTTGGAATCAGACAACTACGGCTTTGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCACAGTCCAAAGTAAATaGTTTAGCGTGTCCATGATT +
Preference number: 5 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFTVQSK*FSVSMI
Trigger: AATCATGGACACGCTAAACAATTTACTTTGGACTGT...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCACACTTCTTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: FYRSCVQLPQFQVLFPHFFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...GAAGTGTGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCTTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: HLFLQELCPASSVPSTVSFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...GGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCACCTTTGTCAGAATaGGAGTGCAGCTTTCCAACA +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSPLSE*ECSFPT
Trigger: TGTTGGAAAGCTGCACTCCAATTCTGACAAAGGTGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLTDPSP*SELECS
Trigger: GCTGCACTCCAATTCTGACAAAGGTGATGGATCTGT...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKAPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACCCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: GCISTYSGSKFHKVARTDPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPTSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPSVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTCTTTGTCAGTGGAGATaGAGAATATTCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPLCQWR*RIFPCH
Trigger: ATGGCATGGGAATATTCTCAATCTCCACTGACAAAG...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTACCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLPSLVS*SVEIEN
Trigger: ATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAAGTACTGTCAGGATCTaGTGCCAAAACTGTACCAAC +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSTVRI*CQNCTN
Trigger: GTTGGTACAGTTTTGGCACAAGATCCTGACAGTACT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTAGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKAAVTVM*YHGVSS
Trigger: AGAAGAAACTCCATGGTACAACATCACAGTCACTGC...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACTCCCTGTTTCTGTTCTaGCTCCTCTTCAGTCTATCT +
Preference number: 5 (lower is better)
Translates to: GCISTYSGSKFHKVARTDSLFLF*LLFSLS
Trigger: AGATAGACTGAAGAGGAGCAAGAACAGAAACAGGGA...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCCCTGTTTCTGTTCTaGCTCCTCTTCAGTCTATCT +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASLFLF*LLFSLS
Trigger: AGATAGACTGAAGAGGAGCAAGAACAGAAACAGGGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS-3UTR CAA 90 bp CCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCGTCTTTCAGACTACATaGTTATTGTGTGAGGTACTT +
Preference number: 5 (lower is better)
Translates to: PVSIMKRALVSTGAVSSFVFQTT*LLCEVL
Trigger: AAGTACCTCACACAATAACAATGTAGTCTGAAAGAC...GAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CAA 90 bp GAAAAGGGCACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACAAGCTTTTATGCAATaGAATACTTTGCAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EKGTCFYRSCVQLPQFQVQAFMQ*NTLQLA
Trigger: TGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTG...TACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGTGCCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS CCA 90 bp CAGAATGCTGGCTGTGTTATCTTCATTGTCCTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTCATCAAGAAAGAAGTTAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: QNAGCVIFIVLQSEV*IYRQAFIKKEVKPW
Trigger: CCAAGGTTTAACTTCTTTCTTGATGAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAGGACAATGAAGATAACACAGCCAGCATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGTCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRSPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCACCTTCAATGTGTTaGGTTTGGTTTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSPSMC*VWFLIT
Trigger: GGTGATGAGAAACCAAACCAAACACATTGAAGGTGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCCCAGTAAGGATGTACTaGACAGATCCATCACCTTTG +
Preference number: 5 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLPVRMY*TDPSPL
Trigger: CAAAGGTGATGGATCTGTCAAGTACATCCTTACTGG...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKATSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACGTCTATCAATAGCTaGAGCATGAAGCACATAGTG +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTSINS*SMKHIV
Trigger: CACTATGTGCTTCATGCTCAAGCTATTGATAGACGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTACTTTGTCAGTGGAGATaGAGAATATTCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLLCQWR*RIFPCH
Trigger: ATGGCATGGGAATATTCTCAATCTCCACTGACAAAG...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACTTGTTTCTACAGGAGCTGTGTCCAGCTTCCTCAGTTCCAAGTACTGTTTCCATTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: TCFYRSCVQLPQFQVLFPFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...TGGAAACAGTACTTGGAACTGAGGAAGCTGGACACAGCTCCTGTAGAAACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACTCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: GCISTYSGSKFHKVARTDSGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCGGGTGGATTGTCATaGACATCCAGAACTCTAATA +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSGGLS*TSRTLI
Trigger: TATTAGAGTTCTGGATGTCAATGACAATCCACCCGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACTTGTCATTGCTGAGGTaGTATATCCACTTACTCAGG +
Preference number: 5 (lower is better)
Translates to: GCISTYSGSKFHKVARTDLSLLR*YIHLLR
Trigger: CCTGAGTAAGTGGATATACAACCTCAGCAATGACAA...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp GCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGATGCCTCTGTCTAGGCTTTTaGTTGAGTGGATATCACCCG +
Preference number: 5 (lower is better)
Translates to: ASFYAIEYFAVGKAFYRCLCLGF*LSGYHP
Trigger: CGGGTGATATCCACTCAACAAAAAGCCTAGACAGAG...GCATCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKASGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVSGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLSGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTAAGCCATGTCTTTGGCTaGAATGACTACGGAGTAATG +
Preference number: 5 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLSHVFG*NDYGVM
Trigger: CATTACTCCGTAGTCATTCAAGCCAAAGACATGGCT...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTCGGTTAAGGTGATGTaGACTGTTGTAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLSVKVM*TVVDPE
Trigger: TTCAGGATCTACAACAGTCAACATCACCTTAACCGA...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp ACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTTTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: TTIARRMRTQRRIAIKAPFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...AGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS CCA 90 bp TTTTCTCATAGTTCAGTGGCTTCTTTAAAGAAAGGATTCCTTCTCTaGTCTCTTTGTCAGTGGAGATTGAGAATATTCCCATGCCATCAC +
Preference number: 5 (lower is better)
Translates to: FSHSSVASLKKGFLL*SLCQWRLRIFPCHH
Trigger: GTGATGGCATGGGAATATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGGAATCCTTTCTTTAAAGAAGCCACTGAACTATGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS-3UTR CAA 90 bp TGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCAGGACAGTCCAAAGTAAATaGTTTAGCGTGTCCATGATT +
Preference number: 5 (lower is better)
Translates to: CFHTSSLSLLRLYIHLLRTVQSK*FSVSMI
Trigger: AATCATGGACACGCTAAACAATTTACTTTGGACTGT...CCTGAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp GGTTGTATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTGACACAGTCCAAAGTAAATaGTTTAGCGTGTCCATGATT +
Preference number: 5 (lower is better)
Translates to: GCISTYSGSKFHKVARTDTVQSK*FSVSMI
Trigger: AATCATGGACACGCTAAACAATTTACTTTGGACTGT...GTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATACAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTACAGTCCAAAGTAAATaGTTTAGCGTGTCCATGATT +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKATVQSK*FSVSMI
Trigger: AATCATGGACACGCTAAACAATTTACTTTGGACTGT...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTAACAGTCCAAAGTAAATaGTTTAGCGTGTCCATGATT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLTVQSK*FSVSMI
Trigger: AATCATGGACACGCTAAACAATTTACTTTGGACTGT...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502796.5
ENST00000506372.5
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTTTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKAFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp ACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCCTGTATTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: TIARRMRTQRRIAIKAPVFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...TACAGGAGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502796.5
ENST00000506372.5
ENST00000515257.6
CDS-3UTR CAA 90 bp CCAAGCAGTGGCAGCAGCTCTCATAAACAAGTTTGTCAGCTAAGATTTCTCTTATTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: PSSGSSSHKQVCQLRFLLFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...TAAGAGAAATCTTAGCTGACAAACTTGTTTATGAGAGCTGCTGCCACTGCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp AAGTACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACATGCTCCATCAGTTTaGTATGGAGAAAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: KYCFHTSSLSLLRLYIHLHAPSV*YGEKNW
Trigger: CCAGTTCTTTTCTCCATACAAAACTGATGGAGCATG...TAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS-3UTR CAA 90 bp AGTACCACAATTGCCAGGAGAATGAGAACACAGAGAAGAATAGCGATTAAGGCTCTCAATCTTTATTACTaGATACTGGGCTCAGAATTG +
Preference number: 5 (lower is better)
Translates to: STTIARRMRTQRRIAIKALNLYY*ILGSEL
Trigger: CAATTCTGAGCCCAGTATCAAGTAATAAAGATTGAG...AGCCTTAATCGCTATTCTTCTCTGTGTTCTCATTCTCCTGGCAATTGTGGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506372.5
CDS TCA 90 bp TATATCCACTTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTaGCCCCCTAAGTTGTTCTTTCAGATTCTATTTCTCCATAGAGTT +
Preference number: 5 (lower is better)
Translates to: YIHLLRKQIPQGCKN*PPKLFFQILFLHRV
Trigger: AACTCTATGGAGAAATAGAATCTGAAAGAACAACTTAGGGGGTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAAGTGGATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
ENST00000510297.1
CDS-3UTR CAA 90 bp TACTGTTTCCACACTTCTTCCTTGTCATTGCTGAGGTTGTATATCCACTTACTCTTTGCTCCTTCTATGTaGAGGGTATATGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: YCFHTSSLSLLRLYIHLLFAPSM*RVYDFF
Trigger: AAAGAAGTCATATACCCTCAACATAGAAGGAGCAAA...GAGTAAGTGGATATACAACCTCAGCAATGACAAGGAAGAAGTGTGGAAACAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TCTGCAAGCTTTTATGCAATTGAATACTTTGCAGTTGGCAAAGCATTTTACAGAGATAGCACAGGGCAATaGCAAACAGAGGTAAAATCC +
Preference number: 5 (lower is better)
Translates to: SASFYAIEYFAVGKAFYRDSTGQ*QTEVKS
Trigger: GGATTTTACCTCTGTTTGCAATTGCCCTGTGCTATC...TCTGTAAAATGCTTTGCCAACTGCAAAGTATTCAATTGCATAAAAGCTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382275.6
CDS TCA 90 bp GAAAATCAAAGCCGTAGTTGTCTGATTCCAACTCTTCACAGTAGTTaGACACAAGCAACCATTTTCAACTCTTTACTCTTCTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: ENQSRSCLIPTLHSS*TQATIFNSLLFSLS
Trigger: GGATAAAGAGAAGAGTAAAGAGTTGAAAATGGTTGCTTGTGTTCAACTACTGTGAAGAGTTGGAATCAGACAACTACGGCTTTGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503132.1
CDS CCA 90 bp ATATGTGTATATATGTTCACCTTCATTGTCCTTCAGAGTGAAGTTTaGATTTACAGGCAGGCGTTCATCAAGAAAGAAGTTAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: ICVYMFTFIVLQSEV*IYRQAFIKKEVKPW
Trigger: CCAAGGTTTAACTTCTTTCTTGATGAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAGGACAATGAAGGTGAACATATATACACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS-3UTR CAA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACACTTTGTCAGTGGAGATaGAGAATATTCCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTLCQWR*RIFPCH
Trigger: ATGGCATGGGAATATTCTCAATCTCCACTGACAAAG...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACATCAGGCTCAAGAGGTTaGTTTGTACGTCTATCAATA +
Preference number: 5 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTSGSRG*FVRLSI
Trigger: TATTGATAGACGTACAAACAAACCTCTTGAGCCTGA...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS-3UTR CAA 90 bp TTCTTCCAATTAAATAACCCAGTTTCGATCATGAAAAGGGCACTTGTTTCTACATTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: FFQLNNPVSIMKRALVSTFNVFG*VSHHLD
Trigger: ATCAAGGTGATGAGAAACCAAACCAAACACATTGAA...TGTAGAAACAAGTGCCCTTTTCATGATCGAAACTGGGTTATTTAATTGGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
CDS GCA 72 bp TCCTGTACTCAAACCAGCCGAGGACAGGAAGGCTTCTaGATGGCAGGTCCGCACACGCCCATCTCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: SCTQTSRGQEGF*MAGPHTPISLA
Trigger: TGCGAGAGAGATGGGCGTGTGCGGACCTGCCATGCAGAAGCCTTCCTGTCCTCGGCTGGTTTGAGTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000515257.6
CDS GCA 72 bp TGCATGGCAGGTCCGCACACGCCCATCTCTCTCGCATaGACAAACCCTGATGGTGAGGGTGCTGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: CMAGPHTPISLA*TNPDGEGAAAS
Trigger: TGAAGCAGCAGCACCCTCACCATCAGGGTTTGTGCATGCGAGAGAGATGGGCGTGTGCGGACCTGCCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502796.5
CDS CCA 72 bp TATAAGAAGCAAAGAGAGGGGACTTTCCCAGAGCTCTaGGCACAGCTGCTCGCCGTCCTCGGAAAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: YKKQREGTFPEL*AQLLAVLGKPR
Trigger: TCTGGGCTTTCCGAGGACGGCGAGCAGCTGTGCCCAGAGCTCTGGGAAAGTCCCCTCTCTTTGCTTCTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382275.6
ENST00000503132.1
ENST00000511273.1
ENST00000511423.5
CDS CCA 72 bp CAAGCAGTCACAGTAGTGATGCTATGGAACGTGCACTaGCTTCCTCCCCACCTTGTGTTCCTCTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: QAVTVVMLWNVH*LPPHLVFLSLS
Trigger: AGAGAGAGAGAGGAACACAAGGTGGGGAGGAAGCCAGTGCACGTTCCATAGCATCACTACTGTGACTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507632.2
ENST00000507958.5
CDS CAA 90 bp TGTCTGGGAGTGAGCTTCACTTCAGGTCTGATATCCCTCCGGTACTaGAGCTCCTCAGCAGCAGAAGGATTCCTCAAGGCTGTGATGTCA +
Preference number: 6 (lower is better)
Translates to: CLGVSFTSGLISLRY*SSSAAEGFLKAVMS
Trigger: TGACATCACAGCCTTGAGGAATCCTTCTGCTGCTGAGGAGCTCAAGTACCGGAGGGATATCAGACCTGAAGTGAAGCTCACTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
ENST00000510297.1
CDS CCA 72 bp GATTATCGGGTACAAGCAGTCACAGTAGTGATGCTATaGAACGTGCACTGGCTTCCTCCCCACCTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: DYRVQAVTVVML*NVHWLPPHLVF
Trigger: GAACACAAGGTGGGGAGGAAGCCAGTGCACGTTCCATAGCATCACTACTGTGACTGCTTGTACCCGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507632.2
ENST00000507958.5
CDS GCA 72 bp GCTCTTTTCTCTCAATCTCCACTGCTGTCACTCTGCTaGAGACACCATCATCTCTCCCCAGAATTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: ALFSQSPLLSLC*RHHHLSPEFLG
Trigger: TCCCAAGAATTCTGGGGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAGTGGAGATTGAGAGAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503132.1
CDS GCA 72 bp CCAATTCCATCAGTGCTCTTTTCTCTCAATCTCCACTaGTGTCACTCTGCTGCAGACACCATCATCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PIPSVLFSLNLH*CHSAADTIISP
Trigger: GGGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAGTGGAGATTGAGAGAAAAGAGCACTGATGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503132.1
CDS GCA 72 bp AACCTTTTCTCTCAATCTCCACTGCTGTCACTCTGCTaGAGACACCATCATCTCTCCCCAGAATTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: NLFSQSPLLSLC*RHHHLSPEFLG
Trigger: TCCCAAGAATTCTGGGGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAGTGGAGATTGAGAGAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382275.6
ENST00000502796.5
ENST00000507958.5
ENST00000511423.5
CDS CAA 90 bp GGTGAGGGTGCTGCTGCTGCAATTTCTGAAGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCTCTGTCGAGAACCTTTGTAGTCCTA +
Preference number: 6 (lower is better)
Translates to: GEGAAAAISEAVTVM*YHGVSSLSRTFVVL
Trigger: TAGGACTACAAAGGTTCTCGACAGAGAAGAAACTCCATGGTACAACATCACAGTCACTGCTTCAGAAATTGCAGCAGCAGCACCCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515257.6
CDS GCA 72 bp AAGCAACCATTTTCAACCTTTTCTCTCAATCTCCACTaGTGTCACTCTGCTGCAGACACCATCATCTCTCCC +
Preference number: 6 (lower is better)
Translates to: KQPFSTFSLNLH*CHSAADTIISP
Trigger: GGGAGAGATGATGGTGTCTGCAGCAGAGTGACAGCAGTGGAGATTGAGAGAAAAGGTTGAAAATGGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382275.6
ENST00000502796.5
ENST00000507958.5
CDS CAA 90 bp TTTGGGACGATGATGGACTTCGGTTTCACCTTCAATGTGTTTGGTTaGGTTTCTCATCACCTTGATGGAGCTGTGGTGAGCAGTTCCATA +
Preference number: 6 (lower is better)
Translates to: FGTMMDFGFTFNVFG*VSHHLDGAVVSSSI
Trigger: TATGGAACTGCTCACCACAGCTCCATCAAGGTGATGAGAAACCAAACCAAACACATTGAAGGTGAAACCGAAGTCCATCATCGTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
CDS TCA 72 bp AATAAATTCCTGAACATCTATGCTTTCCAGGGTGGATaGTGTCTGGTGTCTGGGAGTGAGCTTCACTTCAGG +
Preference number: 6 (lower is better)
Translates to: NKFLNIYAFQGG*CLVSGSELHFR
Trigger: CCTGAAGTGAAGCTCACTCCCAGACACCAGACATCATCCACCCTGGAAAGCATAGATGTTCAGGAATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
ENST00000510297.1
CDS CAA 72 bp AGGCTCAAGAGGTTTGTTTGTACGTCTATCAATAGCTaGAGCATGAAGCACATAGTGGGTCTTCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: RLKRFVCTSINS*SMKHIVGLLLS
Trigger: AGAGAGCAGAAGACCCACTATGTGCTTCATGCTCAAGCTATTGATAGACGTACAAACAAACCTCTTGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000508350.1
ENST00000511273.1
ENST00000515257.6
CDS CAA 72 bp ATATCATATTCCCTGGCAAGTTCGGGTGGATTGTCATaGACATCCAGAACTCTAATACCCACTGTGACATGG +
Preference number: 6 (lower is better)
Translates to: ISYSLASSGGLS*TSRTLIPTVTW
Trigger: CCATGTCACAGTGGGTATTAGAGTTCTGGATGTCAATGACAATCCACCCGAACTTGCCAGGGAATATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
CDS TCA 72 bp TGGAGATTGAGAATATTCCCATGCCATCACCATTTATaGTGGAGTAGGTCATGTCAGCATTTGAGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: WRLRIFPCHHHL*WSRSCQHLSQC
Trigger: ACACTGGCTCAAATGCTGACATGACCTACTCCATCATAAATGGTGATGGCATGGGAATATTCTCAATCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS CAA 90 bp CATACAATAATATCATATTCCCTGGCAAGTTCGGGTGGATTGTCATaGACATCCAGAACTCTAATACCCACTGTGACATGGCTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: HTIISYSLASSGGLS*TSRTLIPTVTWLSK
Trigger: TTTGCTGAGCCATGTCACAGTGGGTATTAGAGTTCTGGATGTCAATGACAATCCACCCGAACTTGCCAGGGAATATGATATTATTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
CDS CCA 72 bp TGGGTCTTCTGCTCTCTGTCTAGGCTTTTTGTTGAGTaGATATCACCCGTGGTATCGTCAATGATAAATATA +
Preference number: 6 (lower is better)
Translates to: WVFCSLSRLFVE*ISPVVSSMINI
Trigger: TATATTTATCATTGACGATACCACGGGTGATATCCACTCAACAAAAAGCCTAGACAGAGAGCAGAAGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000508350.1
ENST00000511273.1
ENST00000515257.6
CDS CAA 72 bp GGCTTCTTTAAAGAAAGGATTCCTTCTCTGGTCTCTTaGTCAGTGGAGATTGAGAATATTCCCATGCCATCA +
Preference number: 6 (lower is better)
Translates to: GFFKERIPSLVS*SVEIENIPMPS
Trigger: TGATGGCATGGGAATATTCTCAATCTCCACTGACAAAGAGACCAGAGAAGGAATCCTTTCTTTAAAGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS CAA 72 bp CTGTCGAGAACCTTTGTAGTCCTAATGGTCCCAGTATaGGCATCAATGTTGAAAAATCTGTCGTCTTCAACA +
Preference number: 6 (lower is better)
Translates to: LSRTFVVLMVPV*ASMLKNLSSST
Trigger: TGTTGAAGACGACAGATTTTTCAACATTGATGCCAATACTGGGACCATTAGGACTACAAAGGTTCTCGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
ENST00000515257.6
CDS CAA 90 bp CTGTCCATCAGGGAAAGGTCAGATCATATTTACATTCTGAACCACTaGGAAAATCAAAGCCGTAGTTGTCTGATTCCAACTCTTCACAGT +
Preference number: 6 (lower is better)
Translates to: LSIRERSDHIYILNH*ENQSRSCLIPTLHS
Trigger: ACTGTGAAGAGTTGGAATCAGACAACTACGGCTTTGATTTTCCAAGTGGTTCAGAATGTAAATATGATCTGACCTTTCCCTGATGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507632.2
ENST00000507958.5
ENST00000511273.1
ENST00000511423.5
CDS CAA 90 bp CTCAGCAAATCAGGATTATCAATTTCTGAAGCAGTGACTGTGATGTaGTACCATGGAGTTTCTTCTCTGTCGAGAACCTTTGTAGTCCTA +
Preference number: 6 (lower is better)
Translates to: LSKSGLSISEAVTVM*YHGVSSLSRTFVVL
Trigger: TAGGACTACAAAGGTTCTCGACAGAGAAGAAACTCCATGGTACAACATCACAGTCACTGCTTCAGAAATTGATAATCCTGATTTGCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507958.5
ENST00000511273.1
CDS TCA 72 bp GAAGGACAGTCCAAAGTAAATTGTTTAGCGTGTCCATaGTTTAACTGTCCATCAGGGAAAGGTCAGATCATA +
Preference number: 6 (lower is better)
Translates to: EGQSKVNCLACP*FNCPSGKGQII
Trigger: TATGATCTGACCTTTCCCTGATGGACAGTTAAATCATGGACACGCTAAACAATTTACTTTGGACTGTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507632.2
ENST00000507958.5
ENST00000511273.1
ENST00000511423.5
CDS TCA 72 bp TTACTCAGGAAGCAAATTCCACAAGGTTGCAAGAACTaGCCCCCTAAGTTGTTCTTTCAGATTCTATTTCTC +
Preference number: 6 (lower is better)
Translates to: LLRKQIPQGCKN*PPKLFFQILFL
Trigger: GAGAAATAGAATCTGAAAGAACAACTTAGGGGGTCAGTTCTTGCAACCTTGTGGAATTTGCTTCCTGAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000507958.5
ENST00000510297.1
CDS CAA 72 bp TCTCCAGTAAGGATGTACTTGACAGATCCATCACCTTaGTCAGAATTGGAGTGCAGCTTAAAAGATAAATCC +
Preference number: 6 (lower is better)
Translates to: SPVRMYLTDPSP*SELECSLKDKS
Trigger: GGATTTATCTTTTAAGCTGCACTCCAATTCTGACAAAGGTGATGGATCTGTCAAGTACATCCTTACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508350.1
CDS TCA 72 bp ATGTGTATATATGTTCACCTTCATTGTCCTTCAGAGTaGAGTTTGGATTTACAGGCAGGCGTTCATCAAGAA +
Preference number: 6 (lower is better)
Translates to: MCIYVHLHCPSE*SLDLQAGVHQE
Trigger: TTCTTGATGAACGCCTGCCTGTAAATCCAAACTTCACTCTGAAGGACAATGAAGGTGAACATATATACACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511273.1
CDS CAA 72 bp AGGGAAAGGTCAGATCATATTTACATTCTGAACCACTaGGAAAATCAAAGCCGTAGTTGTCTGATTCCAACT +
Preference number: 6 (lower is better)
Translates to: RERSDHIYILNH*ENQSRSCLIPT
Trigger: AGTTGGAATCAGACAACTACGGCTTTGATTTTCCAAGTGGTTCAGAATGTAAATATGATCTGACCTTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000274170.8
ENST00000382275.6
ENST00000502796.5
ENST00000506372.5
ENST00000507632.2
ENST00000507958.5
ENST00000511273.1
ENST00000511423.5