RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH17 (Homo sapiens)

Ensembl gene IDs: ENSG00000079112

Ensembl transcript IDs: ENST00000027335.8, ENST00000441892.6, ENST00000450165.6, ENST00000520952.1, ENST00000521491.1

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTaGTTCCTTTACCAAGGTTTGCAGAGTAGGTTGTGTTTGAACACC +
Preference number: 1 (lower is better)
Translates to: QHVCMAGSEEIWPAD*FLYQGLQSRLCLNT
Trigger: GGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR TCA 90 bp CAGCTGACTGGTTCCTTTACCAAGGTTTGCAGAGTAGGTTGTGTTTaGACACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTT +
Preference number: 1 (lower is better)
Translates to: QLTGSFTKVCRVGCV*TPSVGLCHFQVEEF
Trigger: AAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR TCA 90 bp AGGTTGTGTTTGAACACCTTCTGTGGGTCTGTGTCATTTCCAAGTTaGAGAATTTCAGCCAAAGAGCAACATGTCACATTGATTAAAGAT +
Preference number: 1 (lower is better)
Translates to: RLCLNTFCGSVSFPS*RISAKEQHVTLIKD
Trigger: ATCTTTAATCAATGTGACATGTTGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTGTTCAAACACAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACCAGGAGGCGGAGGTTaGAGTGAGCTGGGATCACAC +
Preference number: 2 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAPGGGG*SELGSH
Trigger: GTGTGATCCCAGCTCACTGCAACCTCCGCCTCCTGG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAGAGTAGGTTGTGTTTaGACACCTTCTGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCRVGCV*TPSVGL
Trigger: CAGACCCACAGAAGGTGTTCAAACACAACCTACTCT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAAATATCTAAGTAGGTaGGTGCAGTGGTTCATGCCT +
Preference number: 2 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWKYLSR*VQWFMP
Trigger: AGGCATGAACCACTGCACCCACCTACTTAGATATTT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR CAA 90 bp GGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTaGCAGAGTAGGTTGTGTTTGAACACCTTCTGTGGGTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GSEEIWPADWFLYQG*QSRLCLNTFCGSVS
Trigger: TGACACAGACCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGTGTCATTTCCAAGTTaGAGAATTTCAGCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWVSFPS*RISAKE
Trigger: CTCTTTGGCTGAAATTCTTCAACTTGGAAATGACAC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR CCA 72 bp TGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTaGTTCCTTTACCAAGGTTTGCAGAGTAGGTTGTGT +
Preference number: 3 (lower is better)
Translates to: CMAGSEEIWPAD*FLYQGLQSRLC
Trigger: ACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR CCA 72 bp CATACGAATGAAGAAAACATGCGCAGCATGTATGCATaGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGT +
Preference number: 3 (lower is better)
Translates to: HTNEENMRSMYA*QVVRKSGQLTG
Trigger: ACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATGTTTTCTTCATTCGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTGTGTCATTTCCAAGTaGAAGAATTTCAGCCAAAGA +
Preference number: 3 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCCVISK*KNFSQR
Trigger: TCTTTGGCTGAAATTCTTCAACTTGGAAATGACACA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR TCA 72 bp GGTTCCTTTACCAAGGTTTGCAGAGTAGGTTGTGTTTaGACACCTTCTGTGGGTCTGTGTCATTTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: GSFTKVCRVGCV*TPSVGLCHFQV
Trigger: AACTTGGAAATGACACAGACCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCCCAGTCTGGTGACCTaGTGGCCGGAAACAACTTCC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWPSLVT*WPETTS
Trigger: GGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAGCCCGTGTAGTCCTTaGCTAGCCTGGGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSPCSP*LAWEGC
Trigger: ACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGGTGCACTGAGGGGATaGCAGAAGAACAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWGALRG*QKNKPV
Trigger: CACGGGCTTGTTCTTCTGCCATCCCCTCAGTGCACC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCCACCACTTGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCAGGTGCACTGAGGGGATaGCAGAAGAACAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: WPPLVPDMDFRLLCPMEPGALRG*QKNKPV
Trigger: CACGGGCTTGTTCTTCTGCCATCCCCTCAGTGCACC...TGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTGGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR GCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCCTGGGCGAGAGTTCTaGCTTACTGAGCCTTCGTAC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWPGREF*LTEPSY
Trigger: GTACGAAGGCTCAGTAAGGCAGAACTCTCGCCCAGG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCCAGGAGGCGGAGGTTaGAGTGAGCTGGGATCACAC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCPGGGG*SELGSH
Trigger: GTGTGATCCCAGCTCACTGCAACCTCCGCCTCCTGG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGCTGGCCATTGGGAGTaGCCGGATCATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCAGHWE*PDHPGL
Trigger: CAGACCTGGATGATCCGGCCACTCCCAATGGCCAGC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp ACTTCCAGGTGCACTGAGGGGATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCGATCAGGTGGAACTCTaGCACAGAGCTCAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TSRCTEGMAEEQARVVLGDQVEL*HRAQGR
Trigger: TCTTCCTTGAGCTCTGTGTCAGAGTTCCACCTGATC...GCCAAGGACTACACGGGCTTGTTCTTCTGCCATCCCCTCAGTGCACCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGTATCCCAGTCTGGTaGCCTGCTGGCCGGAAACAA +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGIPVW*PAGRKQ
Trigger: TTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGTATACCAACTGCCATaGCCACAGTGGGTATCCCAG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWVYQLP*PQWVSQ
Trigger: CTGGGATACCCACTGTGGGCATGGCAGTTGGTATAC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCCACCACTTGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCATATCCGGTGTTGGTATaGGGATCTGTGTCAACCCCC +
Preference number: 4 (lower is better)
Translates to: WPPLVPDMDFRLLCPMEPYPVLV*GSVSTP
Trigger: GGGGGTTGACACAGATCCCCATACCAACACCGGATA...TGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTGGTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp ACTTCCAGGTGCACTGAGGGGATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCAGTCCTTGGCTAGCCTaGGAGGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: TSRCTEGMAEEQARVVLGSPWLA*EGCHSH
Trigger: ATGTGAATGACAACCCTCCCAGGCTAGCCAAGGACT...GCCAAGGACTACACGGGCTTGTTCTTCTGCCATCCCCTCAGTGCACCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAGTCTGGTGACCTGCTaGCCGGAAACAACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSLVTC*PETTSF
Trigger: GAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCCCCGAAATAAGTGCTaGTCATCATCAGTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWPRNKC*SSSVAS
Trigger: CGAGGCTACTGATGATGATCAGCACTTATTTCGGGG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGCCGACCCCCATCATTaGTGCGGATCAAGACGACAT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCADPHH*CGSRRH
Trigger: ATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAATGAGACTTCCAGGTaGACTGAGGGGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWNETSR*TEGMAE
Trigger: TTCTGCCATCCCCTCAGTGCACCTGGAAGTCTCATT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCATCAGTGGCCTGGATaGTTAAGATGGTGGACCCAA +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWHQWPG*LRWWTQ
Trigger: TTGGGTCCACCATCTTAACCATCCAGGCCACTGATG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp GATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCTAGCCTGGGAGGGTTGTCATCACTTGTACCCGATATaGACTTCCGGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DGRRTSPCSPWLAWEGCHHLYPI*TSGFSV
Trigger: GACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTG...ATGACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCTTGTTCTTCTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGCAACCTGGAGATTGTaGGTAGATCTTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWATWRL*VDLVSL
Trigger: CAGGGAAACAAGATCTACTCACAATCTCCAGGTTGC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGGGTGAGGATCAGTTaGGTTTTCCACCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGVRIS*VFHHLH
Trigger: GTGGAGATGGTGGAAAACTCAACTGATCCTCACCCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGAAATCTGGCCAGCTaGCTGGTTCCTTTACCAAGG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGNLAS*LVPLPR
Trigger: CCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCATCCATGGGAAGTTTaGGAGTTTGCTCCACAATCC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWHPWEV*EFAPQS
Trigger: GGATTGTGGAGCAAACTCCCAAACTTCCCATGGATG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAGAACTCCCAGTAAATaGCTCATCAGCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWRTPSK*LISISG
Trigger: GCCACTGATGCTGATGAGCCATTTACTGGGAGTTCT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTATCCGGTGTTGGTATaGGGATCTGTGTCAACCCCC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCYPVLV*GSVSTP
Trigger: GGGGGTTGACACAGATCCCCATACCAACACCGGATA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp GATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCTAGCCTGGGAGGGTTGTCATTCCATAAGGATCAGGTaGAACTCTGACACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DGRRTSPCSPWLAWEGCHSIRIR*NSDTEL
Trigger: GAGCTCTGTGTCAGAGTTCCACCTGATCCTTATGGA...ATGACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCTTGTTCTTCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCAATCACCAGAAGGGTaGTCAGCAGTATACCAACTG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWQSPEG*SAVYQL
Trigger: CAGTTGGTATACTGCTGACCACCCTTCTGGTGATTG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGATCTGGCCAGCTGACTaGTTCCTTTACCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWIWPAD*FLYQGL
Trigger: CAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGAT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTCCCATGTCCTTCACTaGGATCACCAGATTATAGGA +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSHVLH*DHQIIG
Trigger: TCCTATAATCTGGTGATCTCAGTGAAGGACATGGGA...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTGTGTCTCCCCTCAGTaGATAGCTTATGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCCVSPQ*IAYVQT
Trigger: GGTCTGGACATAAGCTATTCACTGAGGGGAGACACA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGATCAGGTGGAACTCTaGCACAGAGCTCAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCDQVEL*HRAQGR
Trigger: TCTTCCTTGAGCTCTGTGTCAGAGTTCCACCTGATC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCATTAGCGTCCAGGGCTaGAACCTGGAGATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCISVQG*NLEIVS
Trigger: ACTCACAATCTCCAGGTTGCAGCCCTGGACGCTAAT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp ACCACTTGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAATGAGACTTCCAGGTaGACTGAGGGGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TTCTRYGLPASLSNGATLNETSR*TEGMAE
Trigger: TTCTGCCATCCCCTCAGTGCACCTGGAAGTCTCATT...TAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCTGGTAAAGAAACAATaGCTTCCAAGGGTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCLVKKQ*LPRVAD
Trigger: GTCGGCCACCCTTGGAAGGCATTGTTTCTTTACCAG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCAGCAGTATACCAACTaGCATGCCCACAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCQQYTN*HAHSGY
Trigger: ATACCCACTGTGGGCATGGCAGTTGGTATACTGCTG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAATAAAGCTGGCCATTaGGAGTGGCCGGATCATCCA +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCNKAGH*EWPDHP
Trigger: TGGATGATCCGGCCACTCCCAATGGCCAGCTTTATT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCCTGGATGGTTAAGATaGTGGACCCAATGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWPGWLR*WTQCLC
Trigger: ACACAAACATTGGGTCCACCATCTTAACCATCCAGG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp GATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCTAGCCTGGGAGGGTTGTCATCCTGGATGGTTAAGATaGTGGACCCAATGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: DGRRTSPCSPWLAWEGCHPGWLR*WTQCLC
Trigger: ACACAAACATTGGGTCCACCATCTTAACCATCCAGG...ATGACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCTTGTTCTTCTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGCTCATCAGCATCAGTaGCCTGGATGGTTAAGATGG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCAHQHQ*PGWLRW
Trigger: CCATCTTAACCATCCAGGCCACTGATGCTGATGAGC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCAGATGTGGTATCACTaGAGGAATTCTCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCQMWYH*RNSHSG
Trigger: GCCAGAGTGAGAATTCCTTCAGTGATACCACATCTG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAATTTCCAGCGGATATaGAAGTGGTTTTCCGTACTC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWNFQRI*KWFSVL
Trigger: GAGTACGGAAAACCACTTTCATATCCGCTGGAAATT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAGCTTCTCAGAGGTTTaGCTTCAGATGCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCSFSEV*LQMLEH
Trigger: GTGCTCAAGCATCTGAAGTCAAACCTCTGAGAAGCT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCCTTCGTACTTTGACTaGAGAAACGTGGGTCGATTG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCPSYFD*RNVGRL
Trigger: CAATCGACCCACGTTTCTCCAGTCAAAGTACGAAGG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAGTCGTTCATTCTCCTaGACCTCAAATACGGTTACT +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSRSFS*TSNTVT
Trigger: AGTAACCGTATTTGAGGTCCAGGAGAATGAACGACT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGAAGAGTCCATCCATaGGAAGTTTGGGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGRVHP*EVWEFA
Trigger: AGCAAACTCCCAAACTTCCCATGGATGGACTCTTCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAAGATCTCAGCATCAGTGGCCTaGATGGTTAAGATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CTRYGLPASLSNGATLKISASVA*MVKMVD
Trigger: GTCCACCATCTTAACCATCCAGGCCACTGATGCTGA...GATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp GGCTTCTCTGTCCAATGGAGCCACACTAAAGATCTCACCAGTCACGTGGTCAATGCTCATCAGCATCAGTaGCCTGGATGGTTAAGATGG +
Preference number: 4 (lower is better)
Translates to: GFSVQWSHTKDLTSHVVNAHQHQ*PGWLRW
Trigger: CCATCTTAACCATCCAGGCCACTGATGCTGATGAGC...ATTGACCACGTGACTGGTGAGATCTTTAGTGTGGCTCCATTGGACAGAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTCCATAAGGATCAGGTaGAACTCTGACACAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCSIRIR*NSDTEL
Trigger: GAGCTCTGTGTCAGAGTTCCACCTGATCCTTATGGA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TTGTCATTCACATCCATAAGGATCAGGTGGAACTCTGACACAGAGCTCAAGGAAAGCCCGTGTAGTCCTTaGCTAGCCTGGGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSFTSIRIRWNSDTELKESPCSP*LAWEGC
Trigger: ACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCT...TTCCTTGAGCTCTGTGTCAGAGTTCCACCTGATCCTTATGGATGTGAATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACTGCCATGCCCACAGTaGGTATCCCAGTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALPCPQ*VSQSGD
Trigger: GTCACCAGACTGGGATACCCACTGTGGGCATGGCAG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAACTGGAATATAATTTaGCTCGGTTCTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWNWNII*LGSWPS
Trigger: TGAAGGCCAAGAACCGAGTCAAATTATATTCCAGTT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTCCTTCCTGGTCAATTaGAAATGGGAATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCSFLVN*KWESWQ
Trigger: CTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGATCGTTAAGTTGTACTaGGGAGTATCTTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWIVKLY*GVSCFF
Trigger: GAAGAAGCAAGATACTCCTCAGTACAACTTAACGAT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGGCATGAGTACCATTaGTTTTGGAAACTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGHEYH*FWKLPS
Trigger: ACTGGGAAGTTTCCAAAATCAATGGTACTCATGCCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTATGGTGATAGGGACTaGACCCTCCACTATAATTCC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCYGDRD*TLHYNS
Trigger: GGAATTATAGTGGAGGGTCCAGTCCCTATCACCATA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp ATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAAGATCTCACCAGTCATCAGTGGCCTGGATaGTTAAGATGGTGGACCCAA +
Preference number: 4 (lower is better)
Translates to: IWTSGFSVQWSHTKDLTSHQWPG*LRWWTQ
Trigger: TTGGGTCCACCATCTTAACCATCCAGGCCACTGATG...ACTGGTGAGATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTCACTGACTTTCGCTTaGAATACGTGTTGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSLTFA*NTCWEN
Trigger: ATTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGA...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR CAA 72 bp GAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTaGCAGAGTAGGTTGTGTTTGAACACCTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EIWPADWFLYQG*QSRLCLNTFCG
Trigger: CCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCACGTGTTGGGAAAATTaGGGTGCTTCATTCACATCT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCTCWEN*GASFTS
Trigger: AGATGTGAATGAAGCACCTCAATTTTCCCAACACGT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTTTTCTTCCATTCAGTaGTCGAGACTCTTGCTACGA +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCFSSIQ*SRLLLR
Trigger: TCGTAGCAAGAGTCTCGACCACTGAATGGAAGAAAA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACAAGAAGGGCTTTCCTaGGCGAGAGTTCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAQEGLS*ARVLPY
Trigger: GTAAGGCAGAACTCTCGCCCAGGAAAGCCCTTCTTG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGATGGTTAAGATGGTaGACCCAATGTTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGWLRW*TQCLCL
Trigger: AAGACACAAACATTGGGTCCACCATCTTAACCATCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp ATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAAGATCTCACCAGTAGAACTCCCAGTAAATaGCTCATCAGCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IWTSGFSVQWSHTKDLTSRTPSK*LISISG
Trigger: GCCACTGATGCTGATGAGCCATTTACTGGGAGTTCT...ACTGGTGAGATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAATGCCTTCCAAGGGTaGCCGACCCCCATCATTGAT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRANAFQG*PTPIID
Trigger: ATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAAATATCTAAGTAGGTaGGTGCAGTGGTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCKYLSR*VQWFMP
Trigger: AGGCATGAACCACTGCACCCACCTACTTAGATATTT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACCAGGTCTGTGGCATTaGCATACAAGAAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAPGLWH*HTRRAF
Trigger: GAAAGCCCTTCTTGTATGTCAATGCCACAGACCTGG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCAAAACAAAGGGTCTTaGAATCTTTGTCAGACACCT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCQNKGS*NLCQTP
Trigger: AGGTGTCTGACAAAGATTTCAAGACCCTTTGTTTTG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TTGTCATTCACATCCATAAGGATCAGGTGGAACTCTGACACAGAGCTCAAGGAACCCCGAAATAAGTGCTaGTCATCATCAGTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LSFTSIRIRWNSDTELKEPRNKC*SSSVAS
Trigger: CGAGGCTACTGATGATGATCAGCACTTATTTCGGGG...TTCCTTGAGCTCTGTGTCAGAGTTCCACCTGATCCTTATGGATGTGAATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACATGCGCAGCATGTATaGATGGCAGGTAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAHAQHV*MAGSEE
Trigger: TTCCTCACTACCTGCCATGCATACATGCTGCGCATG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAAGATCGGATGGTTAAGATGGTaGACCCAATGTTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CTRYGLPASLSNGATLKIGWLRW*TQCLCL
Trigger: AAGACACAAACATTGGGTCCACCATCTTAACCATCC...GATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATCAGCATCAGTGGCCTaGATGGTTAAGATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASASVA*MVKMVD
Trigger: GTCCACCATCTTAACCATCCAGGCCACTGATGCTGA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAGACCTTCTGGATCCTTaGCAGTCACATTGCCCACTT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRADLLDP*QSHCPL
Trigger: AAGTGGGCAATGTGACTGCCAAGGATCCAGAAGGTC...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACACTTGTACCCGATATaGACTTCCGGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAHLYPI*TSGFSV
Trigger: GACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAGTCCTTGGCTAGCCTaGGAGGGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASPWLA*EGCHSH
Trigger: ATGTGAATGACAACCCTCCCAGGCTAGCCAAGGACT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAGGTAGTGAGGAAATCTaGCCAGCTGACTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAGSEEI*PADWFL
Trigger: AAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACC...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTATTCTCTGTCACTATaGTATCCACAGATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCYSLSL*YPQMWY
Trigger: ATACCACATCTGTGGATATCATAGTGACAGAGAATA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCAGGTTTCCATAATCTaGTTTTTCAAAGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCQVSII*FFKDGD
Trigger: ATCCCCATCTTTGAAAAATCAGATTATGGAAACCTG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTTGACTTCAGATGCTTaGGCACTTTCAACATTATCT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCLTSDA*ALSTLS
Trigger: AGATAATGTTGAAAGTGCTCAAGCATCTGAAGTCAA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCACCAGTGTTTATTCTTaGTTTGTCACCACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCTSVYS*FVTTLF
Trigger: GAAAAGAGTGGTGACAAATCAAGAATAAACACTGGT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATTCATCCCTGTCATGTaGAGTAAGGGTCCCGATACT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAFIPVM*SKGPDT
Trigger: AGTATCGGGACCCTTACTGCACATGACAGGGATGAA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAATGTTGGAAACAGCTaGTGTTTCAAAATCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCNVGNS*CFKIKR
Trigger: CCTCTTGATTTTGAAACAGCAGCTGTTTCCAACATT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCCTTGGCAAAAGAACTTaGATTGTACTTCACACCAAA +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCLGKRT*IVLHTK
Trigger: TTTGGTGTGAAGTACAATGCAAGTTCTTTTGCCAAG...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAGGTTTGACTTCAGATaGTTGAGCACTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCRFDFR*LSTFNI
Trigger: AATGTTGAAAGTGCTCAAGCATCTGAAGTCAAACCT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAAGGAATTCTCACTCTaGCCTCCCATGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAKEFSL*PPMSFT
Trigger: AGTGAAGGACATGGGAGGCCAGAGTGAGAATTCCTT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACGCAGCATGTATGCATaGCAGGTAGTGAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRARSMYA*QVVRKS
Trigger: AGATTTCCTCACTACCTGCCATGCATACATGCTGCG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
3UTR CAA 72 bp GCTGACTGGTTCCTTTACCAAGGTTTGCAGAGTAGGTaGTGTTTGAACACCTTCTGTGGGTCTGTGTCATTT +
Preference number: 4 (lower is better)
Translates to: ADWFLYQGLQSR*CLNTFCGSVSF
Trigger: AAATGACACAGACCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAAATACGGTTACTGGTaGCGGACATGTAGGTGGATT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAKYGYW*RTCRWI
Trigger: AATCCACCTACATGTCCGTCACCAGTAACCGTATTT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp TGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCCACACTAAAGATCCAGGTTTCCATAATCTaGTTTTTCAAAGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: CTRYGLPASLSNGATLKIQVSII*FFKDGD
Trigger: ATCCCCATCTTTGAAAAATCAGATTATGGAAACCTG...GATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACTAAACTTCCCCTCTTaGCCATATCCAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALNFPS*PYPVAK
Trigger: TTTGGCAACTGGATATGGCCAAGAGGGGAAGTTTAG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCAGTTTAGAAAACTGTTaGCAGTATTTTCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCSLENC*QYFLHP
Trigger: GGGATGAAGAAAATACTGCCAACAGTTTTCTAAACT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATATGTCCAGACCTTCTaGATCCTTGGCAGTCACATT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAYVQTF*ILGSHI
Trigger: AATGTGACTGCCAAGGATCCAGAAGGTCTGGACATA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATCATGGGAAGCTGGATaGCAATCTGGTAATAAAGCT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASWEAG*QSGNKA
Trigger: AGCTTTATTACCAGATTGTCATCCAGCTTCCCATGA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAATCTCACCAGTCACGTaGTCAATTTTAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAISPVT*SILSQP
Trigger: AGGTTGGCTTAAAATTGACCACGTGACTGGTGAGAT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp TTGTCATTCACATCCATAAGGATCAGGTGGAACTCTGACACAGAGCTCAAGGAAATCTCACCAGTCACGTaGTCAATTTTAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: LSFTSIRIRWNSDTELKEISPVT*SILSQP
Trigger: AGGTTGGCTTAAAATTGACCACGTGACTGGTGAGAT...TTCCTTGAGCTCTGTGTCAGAGTTCCACCTGATCCTTATGGATGTGAATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACAGGATTTTCTGCTTTaGACACAATGTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAQDFLL*TQCWKQ
Trigger: CTGTTTCCAACATTGTGTTCAAAGCAGAAAATCCTG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAGTGTCATTTCCAAGTTaGAGAATTTCAGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAVSFPS*RISAKE
Trigger: CTCTTTGGCTGAAATTCTTCAACTTGGAAATGACAC...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAGGCTCAGGATTTTCTaGTTTGAACACAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRARLRIF*FEHNVG
Trigger: TCCAACATTGTGTTCAAAGCAGAAAATCCTGAGCCT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACATCTCCACAGGTTTTaGTGCTTTCCAAATATTCTC +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAHLHRF*CFPNIL
Trigger: GAGAATATTTGGAAAGCACCAAAACCTGTGGAGATG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR TCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATTACTAACATACGAATaGAGAAAACATGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALLTYE*RKHAQH
Trigger: ATGCTGCGCATGTTTTCTTCATTCGTATGTTAGTAA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATTGGCCATATCCAGTTaGCAAATAAAGCATAAGAAG +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALAISS*QIKHKK
Trigger: CTTCTTATGCTTTATTTGGCAACTGGATATGGCCAA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR GCA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATCAATAACGTTGATTTaGACAAAACAAAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASITLI*TKQRVL
Trigger: CAAGACCCTTTGTTTTGTGCAAATCAACGTTATTGA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp ACTTCCAGGTGCACTGAGGGGATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCGCTAGCCTGGGAGGGTaGTCATTCACATCCATAAGG +
Preference number: 5 (lower is better)
Translates to: TSRCTEGMAEEQARVVLGASLGG*SFTSIR
Trigger: CCTTATGGATGTGAATGACAACCCTCCCAGGCTAGC...GCCAAGGACTACACGGGCTTGTTCTTCTGCCATCCCCTCAGTGCACCTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS GCA 90 bp TTATACCAATCACCAGAAGGGTGGTCAGCAGTATACCAACTGCCATaGCCACAGTGGGTATCCCAGTCTGGTGACCTGCTGGCCGGAAAC +
Preference number: 5 (lower is better)
Translates to: LYQSPEGWSAVYQLP*PQWVSQSGDLLAGN
Trigger: GTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGTATACTGCTGACCACCCTTCTGGTGATTGGTATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CCA 90 bp ACCAACTGCCATGCCCACAGTGGGTATCCCAGTCTGGTGACCTGCTaGCCGGAAACAACTTCCTTCCACACAACTGCAGAATGTAACTGG +
Preference number: 5 (lower is better)
Translates to: TNCHAHSGYPSLVTC*PETTSFHTTAECNW
Trigger: CCAGTTACATTCTGCAGTTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAGACCTTCTGGATCCTaGGCAGTCACATTGCCCACT +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWRPSGS*AVTLPT
Trigger: AGTGGGCAATGTGACTGCCAAGGATCCAGAAGGTCT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGCTAGCCTGGGAGGGTaGTCATTCACATCCATAAGG +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWASLGG*SFTSIR
Trigger: CCTTATGGATGTGAATGACAACCCTCCCAGGCTAGC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp AGCAGTATACCAACTGCCATGCCCACAGTGGGTATCCCAGTCTGGTaGCCTGCTGGCCGGAAACAACTTCCTTCCACACAACTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: SSIPTAMPTVGIPVW*PAGRKQLPSTQLQN
Trigger: ATTCTGCAGTTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGTATACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCCATCCATGGGAAGTTaGGGAGTTTGCTCCACAATC +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWPSMGS*GVCSTI
Trigger: GATTGTGGAGCAAACTCCCAAACTTCCCATGGATGG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS GCA 90 bp TATACCAACTGCCATGCCCACAGTGGGTATCCCAGTCTGGTGACCTaGTGGCCGGAAACAACTTCCTTCCACACAACTGCAGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: YTNCHAHSGYPSLVT*WPETTSFHTTAECN
Trigger: GTTACATTCTGCAGTTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTCCAGGTCTGTGGCATaGACATACAAGAAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSRSVA*TYKKGF
Trigger: AAAGCCCTTCTTGTATGTCAATGCCACAGACCTGGA...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGTGGCCACCACTTGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATGGAGCTGGTGGACCCAATGTTaGTGTCTTCAGCAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: CGHHLYPIWTSGFSVQWSWWTQC*CLQQES
Trigger: TGACTCTTGCTGAAGACACAAACATTGGGTCCACCA...GCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTGGTGGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CAA 90 bp GATGGCAGAAGAACAAGCCCGTGTAGTCCTTGGCTAGCCTGGGAGGGTTGTCATATGACATATCCGGTGTaGGTATGGGGATCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: DGRRTSPCSPWLAWEGCHMTYPV*VWGSVS
Trigger: TGACACAGATCCCCATACCAACACCGGATATGTCAT...ATGACAACCCTCCCAGGCTAGCCAAGGACTACACGGGCTTGTTCTTCTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCGCTTGGAATACGTGTaGGGAAAATTGAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWRLEYV*GKLRCF
Trigger: GAAGCACCTCAATTTTCCCAACACGTATTCCAAGCG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTCCTTGGCAGTCACATaGCCCACTTTAGTGCCTATA +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWSLAVT*PTLVPI
Trigger: TATAGGCACTAAAGTGGGCAATGTGACTGCCAAGGA...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCAGAGTAGGTTGTGTTaGAACACCTTCTGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWQSRLC*NTFCGS
Trigger: AGACCCACAGAAGGTGTTCAAACACAACCTACTCTG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp CTGGTAAAGAAACAATGCCTTCCAAGGGTGGCCGACCCCCATCATTaGTGCGGATCAAGACGACATACTCCCTCTCCTCAAACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LVKKQCLPRVADPHH*CGSRRHTPSPQTLC
Trigger: ACACAGAGTTTGAGGAGAGGGAGTATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATTGTTTCTTTACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS-3UTR CAA 90 bp GGCTTCTCTGTCCAATGGAGCCACACTAAAGATCTCACCAGTCACGTGGTCAATTTCTGTGGCCACCACTaGTACCCGATATGGACTTCC +
Preference number: 5 (lower is better)
Translates to: GFSVQWSHTKDLTSHVVNFCGHH*YPIWTS
Trigger: GGAAGTCCATATCGGGTACAAGTGGTGGCCACAGAA...ATTGACCACGTGACTGGTGAGATCTTTAGTGTGGCTCCATTGGACAGAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS CCA 90 bp GGCCACCACTTGTACCCGATATGGACTTCCGGCTTCTCTGTCCAATaGAGCCACACTAAAGATCTCACCAGTCACGTGGTCAATTTTAAG +
Preference number: 5 (lower is better)
Translates to: GHHLYPIWTSGFSVQ*SHTKDLTSHVVNFK
Trigger: CTTAAAATTGACCACGTGACTGGTGAGATCTTTAGTGTGGCTCCATTGGACAGAGAAGCCGGAAGTCCATATCGGGTACAAGTGGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGGAAGTTTGGGAGTTaGCTCCACAATCCTGTAGTT +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGKFGS*LHNPVV
Trigger: AACTACAGGATTGTGGAGCAAACTCCCAAACTTCCC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCTGGTGGACCCAATGTTaGTGTCTTCAGCAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCWWTQC*CLQQES
Trigger: TGACTCTTGCTGAAGACACAAACATTGGGTCCACCA...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCATGACATATCCGGTGTaGGTATGGGGATCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCMTYPV*VWGSVS
Trigger: TGACACAGATCCCCATACCAACACCGGATATGTCAT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAGGCCGACCCCCATCATaGATGCGGATCAAGACGACA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAGRPPS*MRIKTT
Trigger: TGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCC...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTaGCAGAGTAGGTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWFLYQG*QSRLCL
Trigger: CAAACACAACCTACTCTGCAAACCTTGGTAAAGGAA...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS CCA 90 bp CCCTCAGTGAATAGCTTTTTAATTATGACATATCCGGTGTTGGTATaGGGATCTGTGTCAACCCCCAGGCGTCCCTCACTGTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: PSVNSFLIMTYPVLV*GSVSTPRRPSLSPF
Trigger: AAAGGGAGACAGTGAGGGACGCCTGGGGGTTGACACAGATCCCCATACCAACACCGGATATGTCATAATTAAAAAGCTATTCACTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGAAACTGGAATATAATTaGACTCGGTTCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWKLEYN*TRFLAF
Trigger: GAAGGCCAAGAACCGAGTCAAATTATATTCCAGTTT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGCTTGGCAGCTTCTCTTaGTCAACTAAGGAATATTGT +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWLGSFS*STKEYC
Trigger: ACAATATTCCTTAGTTGACAAAGAGAAGCTGCCAAG...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGGCAAAAGAACTTGCATaGTACTTCACACCAAACACT +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWAKELA*YFTPNT
Trigger: AGTGTTTGGTGTGAAGTACAATGCAAGTTCTTTTGC...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CATGCGCAGCATGTATGCATGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGACTTGGCAAAAGAACTaGCATTGTACTTCACACCAA +
Preference number: 5 (lower is better)
Translates to: HAQHVCMAGSEEIWPADWTWQKN*HCTSHQ
Trigger: TTGGTGTGAAGTACAATGCAAGTTCTTTTGCCAAGT...CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGGTTTGCAGAGTAGGTaGTGTTTGAACACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCGLQSR*CLNTFC
Trigger: ACAGAAGGTGTTCAAACACAACCTACTCTGCAAACC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACTGAGCCTTCGTACTTaGACTGGAGAAACGTGGGTC +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALSLRT*TGETWV
Trigger: GACCCACGTTTCTCCAGTCAAAGTACGAAGGCTCAG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGTACTGAGGAGTATCTaGCTTCTTCAAGGACTGTTT +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCVLRSI*LLQGLF
Trigger: AAACAGTCCTTGAAGAAGCAAGATACTCCTCAGTAC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCGCTTTGAACACAATGTaGGAAACAGCTGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCALNTM*ETAAVS
Trigger: TGAAACAGCAGCTGTTTCCAACATTGTGTTCAAAGC...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATTCTGTGGCCACCACTaGTACCCGATATGGACTTCC +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAFCGHH*YPIWTS
Trigger: GGAAGTCCATATCGGGTACAAGTGGTGGCCACAGAA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATGGGGTGAGGATCAGTaGAGTTTTCCACCATCTCCA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAWGEDQ*SFPPSP
Trigger: TGGAGATGGTGGAAAACTCAACTGATCCTCACCCCA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp TGGCAGGTAGTGAGGAAATCTGGCCAGCTGACTGGTTCCTTTACCAAGGTTTGCACAATAAGCGTGAACTaGGCAAAAGAACTTGCATTG +
Preference number: 5 (lower is better)
Translates to: WQVVRKSGQLTGSFTKVCTISVN*AKELAL
Trigger: CAATGCAAGTTCTTTTGCCAAGTTCACGCTTATTGT...GCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp GATCCCTCTCGGGTAAGAGAGATGGCTCCCGTTTTGTTGTTGATCTaGAAGTACATGACATTGTTGATCATGGGAAGCTGGATGACAATC +
Preference number: 5 (lower is better)
Translates to: DPSRVREMAPVLLLI*KYMTLLIMGSWMTI
Trigger: GATTGTCATCCAGCTTCCCATGATCAACAATGTCATGTACTTTCAGATCAACAACAAAACGGGAGCCATCTCTCTTACCCGAGAGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS TCA 90 bp TCTGTGTCAACCCCCAGGCGTCCCTCACTGTCTCCCTTTATGATATaGTACAGAATTTTAGAACTCCCAGTAAATGGCTCATCAGCATCA +
Preference number: 5 (lower is better)
Translates to: SVSTPRRPSLSPFMI*YRILELPVNGSSAS
Trigger: TGATGCTGATGAGCCATTTACTGGGAGTTCTAAAATTCTGTATCATATCATAAAGGGAGACAGTGAGGGACGCCTGGGGGTTGACACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAACTAAACTTCCCCTCTaGGCCATATCCAGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRATKLPL*AISSCQ
Trigger: TTGGCAACTGGATATGGCCAAGAGGGGAAGTTTAGT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp GGTATCACTGAAGGAATTCTCACTCTGGCCTCCCATGTCCTTCACTaGGATCACCAGATTATAGGAAGGATTCTTAGCAGGATTCAATTC +
Preference number: 5 (lower is better)
Translates to: GITEGILTLASHVLH*DHQIIGRILSRIQF
Trigger: GAATTGAATCCTGCTAAGAATCCTTCCTATAATCTGGTGATCTCAGTGAAGGACATGGGAGGCCAGAGTGAGAATTCCTTCAGTGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS TCA 90 bp GCTACATCCTCACTGACTTTCGCTTGGAATACGTGTTGGGAAAATTaGGGTGCTTCATTCACATCTGTCACAATAAGCGTGAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: ATSSLTFAWNTCWEN*GASFTSVTISVNLA
Trigger: TGCCAAGTTCACGCTTATTGTGACAGATGTGAATGAAGCACCTCAATTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGAGGATGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CCA 90 bp AGAATTTTAGAACTCCCAGTAAATGGCTCATCAGCATCAGTGGCCTaGATGGTTAAGATGGTGGACCCAATGTTTGTGTCTTCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: RILELPVNGSSASVA*MVKMVDPMFVSSAR
Trigger: TCTTGCTGAAGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTGATGCTGATGAGCCATTTACTGGGAGTTCTAAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACTCCTTCCTGGTCAATaGAAAATGGGAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALLPGQ*KMGILA
Trigger: TGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCACTCACTGACTTTCGCTaGGAATACGTGTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRALTDFR*EYVLGK
Trigger: TTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGAG...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAAGTACATGACATTGTaGATCATGGGAAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRAKYMTL*IMGSWM
Trigger: CATCCAGCTTCCCATGATCAACAATGTCATGTACTT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAAGGGTCTTGAAATCTTaGTCAGACACCTCTATCGTT +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRARVLKS*SDTSIV
Trigger: AACGATAGAGGTGTCTGACAAAGATTTCAAGACCCT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS CCA 90 bp ACTGTAACATTCCAGCATAGGTTTGGATTAGGAAGAGTCCATCCATaGGAAGTTTGGGAGTTTGCTCCACAATCCTGTAGTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: TVTFQHRFGLGRVHP*EVWEFAPQSCSLEN
Trigger: GTTTTCTAAACTACAGGATTGTGGAGCAAACTCCCAAACTTCCCATGGATGGACTCTTCCTAATCCAAACCTATGCTGGAATGTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATCTATCACAAATATGTaGTCTGTCTCCCCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASITNM*SVSPVS
Trigger: ACTAACTGGGGAGACAGACAACATATTTGTGATAGA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCAACAAAACAAAGGGTCTaGAAATCTTTGTCAGACACC +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRATKQRV*KSLSDT
Trigger: GGTGTCTGACAAAGATTTCAAGACCCTTTGTTTTGT...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp CATTGTACTTCACACCAAACACTAGAGGCTCAGGATTTTCTGCTTTaGACACAATGTTGGAAACAGCTGCTGTTTCAAAATCAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: HCTSHQTLEAQDFLL*TQCWKQLLFQNQEA
Trigger: AGCCTCTTGATTTTGAAACAGCAGCTGTTTCCAACATTGTGTTCAAAGCAGAAAATCCTGAGCCTCTAGTGTTTGGTGTGAAGTACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS-3UTR CAA 90 bp CACCTTCTGTGGGTCTGTGTCATTTCCAAGTTGAAGAATTTCAGCCAAAGAGCATCAGGATTTTCTGCTTaGAACACAATGTTGGAAACA +
Preference number: 5 (lower is better)
Translates to: HLLWVCVISKLKNFSQRASGFSA*NTMLET
Trigger: TGTTTCCAACATTGTGTTCAAAGCAGAAAATCCTGA...TGCTCTTTGGCTGAAATTCTTCAACTTGGAAATGACACAGACCCACAGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000027335.8
CDS TCA 90 bp AGGGTCTTGAAATCTTTGTCAGACACCTCTATCGTTAAGTTGTACTaGGGAGTATCTTGCTTCTTCAAGGACTGTTTAGCTAACTGTAAC +
Preference number: 5 (lower is better)
Translates to: RVLKSLSDTSIVKLY*GVSCFFKDCLANCN
Trigger: GTTACAGTTAGCTAAACAGTCCTTGAAGAAGCAAGATACTCCTCAGTACAACTTAACGATAGAGGTGTCTGACAAAGATTTCAAGACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS TCA 90 bp ATTCCTTTTCAAATTCAGCTTCTCAGAGGTTTGACTTCAGATGCTTaGGCACTTTCAACATTATCTTTGCCTTTATCCTTCTTTATGCGG +
Preference number: 5 (lower is better)
Translates to: IPFQIQLLRGLTSDA*ALSTLSLPLSFFMR
Trigger: CCGCATAAAGAAGGATAAAGGCAAAGATAATGTTGAAAGTGCTCAAGCATCTGAAGTCAAACCTCTGAGAAGCTGAATTTGAAAAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000441892.6
CDS TCA 72 bp CCAACTGCCATGCCCACAGTGGGTATCCCAGTCTGGTaGCCTGCTGGCCGGAAACAACTTCCTTCCACACAA +
Preference number: 6 (lower is better)
Translates to: PTAMPTVGIPVW*PAGRKQLPSTQ
Trigger: TTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS GCA 72 bp TGCCATGCCCACAGTGGGTATCCCAGTCTGGTGACCTaGTGGCCGGAAACAACTTCCTTCCACACAACTGCA +
Preference number: 6 (lower is better)
Translates to: CHAHSGYPSLVT*WPETTSFHTTA
Trigger: TGCAGTTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS GCA 72 bp TCACCAGAAGGGTGGTCAGCAGTATACCAACTGCCATaGCCACAGTGGGTATCCCAGTCTGGTGACCTGCTG +
Preference number: 6 (lower is better)
Translates to: SPEGWSAVYQLP*PQWVSQSGDLL
Trigger: CAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGTATACTGCTGACCACCCTTCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS GCA 72 bp ACCAATCACCAGAAGGGTGGTCAGCAGTATACCAACTaGCATGCCCACAGTGGGTATCCCAGTCTGGTGACC +
Preference number: 6 (lower is better)
Translates to: TNHQKGGQQYTN*HAHSGYPSLVT
Trigger: GGTCACCAGACTGGGATACCCACTGTGGGCATGGCAGTTGGTATACTGCTGACCACCCTTCTGGTGATTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CCA 72 bp CATGCCCACAGTGGGTATCCCAGTCTGGTGACCTGCTaGCCGGAAACAACTTCCTTCCACACAACTGCAGAA +
Preference number: 6 (lower is better)
Translates to: HAHSGYPSLVTC*PETTSFHTTAE
Trigger: TTCTGCAGTTGTGTGGAAGGAAGTTGTTTCCGGCCAGCAGGTCACCAGACTGGGATACCCACTGTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 72 bp CCATTGGGAGTGGCCGGATCATCCAGGTCTGTGGCATaGACATACAAGAAGGGCTTTCCTGGGCGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: PLGVAGSSRSVA*TYKKGFPGREF
Trigger: GAACTCTCGCCCAGGAAAGCCCTTCTTGTATGTCAATGCCACAGACCTGGATGATCCGGCCACTCCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 72 bp GAAACAATGCCTTCCAAGGGTGGCCGACCCCCATCATaGATGCGGATCAAGACGACATACTCCCTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ETMPSKGGRPPS*MRIKTTYSLSS
Trigger: TGAGGAGAGGGAGTATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS TCA 72 bp AAACAATGCCTTCCAAGGGTGGCCGACCCCCATCATTaGTGCGGATCAAGACGACATACTCCCTCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: KQCLPRVADPHH*CGSRRHTPSPQ
Trigger: TTGAGGAGAGGGAGTATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 90 bp CCTGGTAAAGAAACAATGCCTTCCAAGGGTGGCCGACCCCCATCATaGATGCGGATCAAGACGACATACTCCCTCTCCTCAAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: PGKETMPSKGGRPPS*MRIKTTYSLSSNSV
Trigger: CACAGAGTTTGAGGAGAGGGAGTATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATTGTTTCTTTACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441892.6
CDS CAA 90 bp ACTGGTAAAGAAACAATGCCTTCCAAGGGTGGCCGACCCCCATCATaGATGCGGATCAAGACGACATACTCCCTCTCCTCAAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: TGKETMPSKGGRPPS*MRIKTTYSLSSNSV
Trigger: CACAGAGTTTGAGGAGAGGGAGTATGTCGTCTTGATCCGCATCAATGATGGGGGTCGGCCACCCTTGGAAGGCATTGTTTCTTTACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS GCA 72 bp GTAAGGGTCCCGATACTGTTACCTGGGCGAGAGTTCTaGCTTACTGAGCCTTCGTACTTTGACTGGAGAAAC +
Preference number: 6 (lower is better)
Translates to: VRVPILLPGREF*LTEPSYFDWRN
Trigger: GTTTCTCCAGTCAAAGTACGAAGGCTCAGTAAGGCAGAACTCTCGCCCAGGTAACAGTATCGGGACCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441892.6
CDS CCA 72 bp AGGGTCCCGATACTGTTACCCAGTCGTTCATTCTCCTaGACCTCAAATACGGTTACTGGTGACGGACATGTA +
Preference number: 6 (lower is better)
Translates to: RVPILLPSRSFS*TSNTVTGDGHV
Trigger: TACATGTCCGTCACCAGTAACCGTATTTGAGGTCCAGGAGAATGAACGACTGGGTAACAGTATCGGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CCA 72 bp GCTCATCAGCATCAGTGGCCTGGATGGTTAAGATGGTaGACCCAATGTTTGTGTCTTCAGCAAGAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: AHQHQWPGWLRW*TQCLCLQQESG
Trigger: ACCTGACTCTTGCTGAAGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTGATGCTGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CCA 72 bp AGAGGCTTTTTAATTATGACATATCCGGTGTTGGTATaGGGATCTGTGTCAACCCCCAGGCGTCCCTCACTG +
Preference number: 6 (lower is better)
Translates to: RGFLIMTYPVLV*GSVSTPRRPSL
Trigger: CAGTGAGGGACGCCTGGGGGTTGACACAGATCCCCATACCAACACCGGATATGTCATAATTAAAAAGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CCA 72 bp GTCGTTGATGTCCTTCACTTTTATGGTGATAGGGACTaGACCCTCCACTATAATTCCATTAGCGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VVDVLHFYGDRD*TLHYNSISVQG
Trigger: GCCCTGGACGCTAATGGAATTATAGTGGAGGGTCCAGTCCCTATCACCATAAAAGTGAAGGACATCAACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000521491.1
CDS CCA 72 bp ATGGCTCATCAGCATCAGTGGCCTGGATGGTTAAGATaGTGGACCCAATGTTTGTGTCTTCAGCAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: MAHQHQWPGWLR*WTQCLCLQQES
Trigger: TGACTCTTGCTGAAGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTGATGCTGATGAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CCA 72 bp GAACTCCCAGTAAATGGCTCATCAGCATCAGTGGCCTaGATGGTTAAGATGGTGGACCCAATGTTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: ELPVNGSSASVA*MVKMVDPMFVS
Trigger: AGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTGATGCTGATGAGCCATTTACTGGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CCA 72 bp TCCAATGGAGCCACACTAAAGATCTCACCAGTCACGTaGTCAATTTTAAGCCAACCTCTTGTGTCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: SNGATLKISPVT*SILSQPLVSPL
Trigger: GAGGGGAGACACAAGAGGTTGGCTTAAAATTGACCACGTGACTGGTGAGATCTTTAGTGTGGCTCCATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CAA 90 bp TCTCCTTCCTGGTCAATTGAAAATGGGAATCTTGGCAGCTTCTCTTaGTCAACTAAGGAATATTGTGCACCGGGATCATTCCACCGCACC +
Preference number: 6 (lower is better)
Translates to: SPSWSIENGNLGSFS*STKEYCAPGSFHRT
Trigger: GGTGCGGTGGAATGATCCCGGTGCACAATATTCCTTAGTTGACAAAGAGAAGCTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CCA 72 bp TCCACAGATGTGGTATCACTGAAGGAATTCTCACTCTaGCCTCCCATGTCCTTCACTGAGATCACCAGATTA +
Preference number: 6 (lower is better)
Translates to: STDVVSLKEFSL*PPMSFTEITRL
Trigger: TAATCTGGTGATCTCAGTGAAGGACATGGGAGGCCAGAGTGAGAATTCCTTCAGTGATACCACATCTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CCA 72 bp AATAGCTTTTTAATTATGACATATCCGGTGTTGGTATaGGGATCTGTGTCAACCCCCAGGCGTCCCTCACTG +
Preference number: 6 (lower is better)
Translates to: NSFLIMTYPVLV*GSVSTPRRPSL
Trigger: CAGTGAGGGACGCCTGGGGGTTGACACAGATCCCCATACCAACACCGGATATGTCATAATTAAAAAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520952.1
CDS CAA 72 bp CAGTGGCCTGGATGGTTAAGATGGTGGACCCAATGTTaGTGTCTTCAGCAAGAGTCAGGTTTCCATAATCTG +
Preference number: 6 (lower is better)
Translates to: QWPGWLRWWTQC*CLQQESGFHNL
Trigger: CAGATTATGGAAACCTGACTCTTGCTGAAGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS TCA 72 bp CGGGTAAGAGAGATGGCTCCCGTTTTGTTGTTGATCTaGAAGTACATGACATTGTTGATCATGGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: RVREMAPVLLLI*KYMTLLIMGSW
Trigger: CCAGCTTCCCATGATCAACAATGTCATGTACTTTCAGATCAACAACAAAACGGGAGCCATCTCTCTTACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS TCA 72 bp ACCCCCAGGCGTCCCTCACTGTCTCCCTTTATGATATaGTACAGAATTTTAGAACTCCCAGTAAATGGCTCA +
Preference number: 6 (lower is better)
Translates to: TPRRPSLSPFMI*YRILELPVNGS
Trigger: TGAGCCATTTACTGGGAGTTCTAAAATTCTGTATCATATCATAAAGGGAGACAGTGAGGGACGCCTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CCA 72 bp TTCCAGCATAGGTTTGGATTAGGAAGAGTCCATCCATaGGAAGTTTGGGAGTTTGCTCCACAATCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: FQHRFGLGRVHP*EVWEFAPQSCS
Trigger: ACTACAGGATTGTGGAGCAAACTCCCAAACTTCCCATGGATGGACTCTTCCTAATCCAAACCTATGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp TGTCATGGGTTTCAGGGGTCCACTAAACTTCCCCTCTaGGCCATATCCAGTTGCCAAATAAAGCATAAGAAG +
Preference number: 6 (lower is better)
Translates to: CHGFQGSTKLPL*AISSCQIKHKK
Trigger: CTTCTTATGCTTTATTTGGCAACTGGATATGGCCAAGAGGGGAAGTTTAGTGGACCCCTGAAACCCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000521491.1
CDS CAA 90 bp CTCGGTCCAAGGGCTGAGTCACGTAAATATCTCCTTCCTGGTCAATaGAAAATGGGAATCTTGGCAGCTTCTCTTTGTCAACTAAGGAAT +
Preference number: 6 (lower is better)
Translates to: LGPRAESRKYLLPGQ*KMGILAASLCQLRN
Trigger: ATTCCTTAGTTGACAAAGAGAAGCTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAGATATTTACGTGACTCAGCCCTTGGACCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 90 bp AGCTACATCCTCACTGACTTTCGCTTGGAATACGTGTTGGGAAAATaGAGGTGCTTCATTCACATCTGTCACAATAAGCGTGAACTTGGC +
Preference number: 6 (lower is better)
Translates to: SYILTDFRLEYVLGK*RCFIHICHNKRELG
Trigger: GCCAAGTTCACGCTTATTGTGACAGATGTGAATGAAGCACCTCAATTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGAGGATGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS TCA 72 bp GGGCTGAGTCACGTAAATATCTCCTTCCTGGTCAATTaGAAATGGGAATCTTGGCAGCTTCTCTTTGTCAAC +
Preference number: 6 (lower is better)
Translates to: GLSHVNISFLVN*KWESWQLLFVN
Trigger: GTTGACAAAGAGAAGCTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAGATATTTACGTGACTCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 90 bp CATCAGCATCAGTGGCCTGGATGGTTAAGATGGTGGACCCAATGTTaGTGTCTTCAGCAAGAGTCAGGTTTCCATAATCTGATTTTTCAA +
Preference number: 6 (lower is better)
Translates to: HQHQWPGWLRWWTQC*CLQQESGFHNLIFQ
Trigger: TTGAAAAATCAGATTATGGAAACCTGACTCTTGCTGAAGACACAAACATTGGGTCCACCATCTTAACCATCCAGGCCACTGATGCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
ENST00000520952.1
CDS CAA 90 bp ATTGCCCACTTTAGTGCCTATAGCTACATCCTCACTGACTTTCGCTaGGAATACGTGTTGGGAAAATTGAGGTGCTTCATTCACATCTGT +
Preference number: 6 (lower is better)
Translates to: IAHFSAYSYILTDFR*EYVLGKLRCFIHIC
Trigger: ACAGATGTGAATGAAGCACCTCAATTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGAGGATGTAGCTATAGGCACTAAAGTGGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp AGGGCTGAGTCACGTAAATATCTCCTTCCTGGTCAATaGAAAATGGGAATCTTGGCAGCTTCTCTTTGTCAA +
Preference number: 6 (lower is better)
Translates to: RAESRKYLLPGQ*KMGILAASLCQ
Trigger: TTGACAAAGAGAAGCTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAGATATTTACGTGACTCAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 90 bp GAGTCACGTAAATATCTCCTTCCTGGTCAATTGAAAATGGGAATCTaGGCAGCTTCTCTTTGTCAACTAAGGAATATTGTGCACCGGGAT +
Preference number: 6 (lower is better)
Translates to: ESRKYLLPGQLKMGI*AASLCQLRNIVHRD
Trigger: ATCCCGGTGCACAATATTCCTTAGTTGACAAAGAGAAGCTGCCAAGATTCCCATTTTCAATTGACCAGGAAGGAGATATTTACGTGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000027335.8
ENST00000450165.6
CDS CAA 90 bp GCATTGTACTTCACACCAAACACTAGAGGCTCAGGATTTTCTGCTTaGAACACAATGTTGGAAACAGCTGCTGTTTCAAAATCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: ALYFTPNTRGSGFSA*NTMLETAAVSKSRG
Trigger: GCCTCTTGATTTTGAAACAGCAGCTGTTTCCAACATTGTGTTCAAAGCAGAAAATCCTGAGCCTCTAGTGTTTGGTGTGAAGTACAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp GTCACAATAAGCGTGAACTTGGCAAAAGAACTTGCATaGTACTTCACACCAAACACTAGAGGCTCAGGATTT +
Preference number: 6 (lower is better)
Translates to: VTISVNLAKELA*YFTPNTRGSGF
Trigger: AAATCCTGAGCCTCTAGTGTTTGGTGTGAAGTACAATGCAAGTTCTTTTGCCAAGTTCACGCTTATTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp GGTGCTTCATTCACATCTGTCACAATAAGCGTGAACTaGGCAAAAGAACTTGCATTGTACTTCACACCAAAC +
Preference number: 6 (lower is better)
Translates to: GASFTSVTISVN*AKELALYFTPN
Trigger: GTTTGGTGTGAAGTACAATGCAAGTTCTTTTGCCAAGTTCACGCTTATTGTGACAGATGTGAATGAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp TTTAGTGCCTATAGCTACATCCTCACTGACTTTCGCTaGGAATACGTGTTGGGAAAATTGAGGTGCTTCATT +
Preference number: 6 (lower is better)
Translates to: FSAYSYILTDFR*EYVLGKLRCFI
Trigger: AATGAAGCACCTCAATTTTCCCAACACGTATTCCAAGCGAAAGTCAGTGAGGATGTAGCTATAGGCACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 90 bp TTCACATCTGTCACAATAAGCGTGAACTTGGCAAAAGAACTTGCATaGTACTTCACACCAAACACTAGAGGCTCAGGATTTTCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: FTSVTISVNLAKELA*YFTPNTRGSGFSAL
Trigger: CAAAGCAGAAAATCCTGAGCCTCTAGTGTTTGGTGTGAAGTACAATGCAAGTTCTTTTGCCAAGTTCACGCTTATTGTGACAGATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS TCA 72 bp AAATCTTTGTCAGACACCTCTATCGTTAAGTTGTACTaGGGAGTATCTTGCTTCTTCAAGGACTGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: KSLSDTSIVKLY*GVSCFFKDCLA
Trigger: AGCTAAACAGTCCTTGAAGAAGCAAGATACTCCTCAGTACAACTTAACGATAGAGGTGTCTGACAAAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6
CDS CAA 72 bp GATGGGGATCTGATCATTGATATCAATAACGTTGATTaGCACAAAACAAAGGGTCTTGAAATCTTTGTCAGA +
Preference number: 6 (lower is better)
Translates to: DGDLIIDINNVD*HKTKGLEIFVR
Trigger: TCTGACAAAGATTTCAAGACCCTTTGTTTTGTGCAAATCAACGTTATTGATATCAATGATCAGATCCCCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000027335.8
ENST00000441892.6
ENST00000450165.6