RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH13 (Homo sapiens)

Ensembl gene IDs: ENSG00000140945

Ensembl transcript IDs: ENST00000268613.14, ENST00000428848.7, ENST00000431540.7, ENST00000539548.6, ENST00000562307.1, ENST00000562601.5, ENST00000565636.5, ENST00000566333.1, ENST00000567109.6, ENST00000567445.1, ENST00000568770.5, ENST00000569144.5, ENST00000569454.1, ENST00000569455.1

Found 903 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTaGCAGTGCCCTGTAAAGCCAGTAGAGGAAATCTTGTGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: PALQEEGSKVRPGDA*QCPVKPVEEILWSV
Trigger: CACACTCCACAAGATTTCCTCTACTGGCTTTACAGGGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp GCTGCCCACAGAGAGGTCCTCCTGCCTGGTCACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTG +
Preference number: 1 (lower is better)
Translates to: AAHREVLLPGHHHGV*VEDWALVDIQDSDV
Trigger: CACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTGACCAGGCAGGAGGACCTCTCTGTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp TCCCTCTCTGTGGACCTGCCTGGCTGGTTGTGGCAGCATTCAGACTaGACGGGACAGTGGAGAAGTAGCTTCGGAGCAAAAGTGACAGCT +
Preference number: 1 (lower is better)
Translates to: SLSVDLPGWLWQHSD*TGQWRSSFGAKVTA
Trigger: AGCTGTCACTTTTGCTCCGAAGCTACTTCTCCACTGTCCCGTTCAGTCTGAATGCTGCCACAACCAGCCAGGCAGGTCCACAGAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp CGTCTGCTGACGGATATTATACCGCAGGAGGGCATTATCGGTGGCTaGGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCC +
Preference number: 1 (lower is better)
Translates to: RLLTDIIPQEGIIGG*VICIKGCHPHHCGA
Trigger: GGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACCCAGCCACCGATAATGCCCTCCTGCGGTATAATATCCGTCAGCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 90 bp CAGGCGTCTGCTGACGGATATTATACCGCAGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGG +
Preference number: 1 (lower is better)
Translates to: QASADGYYTAGGHYR*LGHLHQRLSSASLW
Trigger: CCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACCCAGCCACCGATAATGCCCTCCTGCGGTATAATATCCGTCAGCAGACGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp GCTCTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATaGACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTGAC +
Preference number: 1 (lower is better)
Translates to: ALPGVSVDDGVGSPP*TCGGVILIFNCQID
Trigger: GTCAATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp GCGGGAGGCCCTGGAGGGTTCAGGTGTCTTAGTTTCCACCCACCTTaGTTAACCTTGCAAGGAAGAATGGCATCAAAACGAGGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: AGGPGGFRCLSFHPP*LTLQGRMASKRGFS
Trigger: GGAGAAGCCTCGTTTTGATGCCATTCTTCCTTGCAAGGTTAAGCAAGGTGGGTGGAAACTAAGACACCTGAACCCTCCAGGGCCTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp TTAGATTCCCCTGTCCCTGAGTCGGGGGCATGTGCTCGTGGAGAATaGCCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACA +
Preference number: 1 (lower is better)
Translates to: LDSPVPESGACARGE*PYQVQGVASPDPAT
Trigger: TGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGGTCATTCTCCACGAGCACATGCCCCCGACTCAGGGACAGGGGAATCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp ACAGTGCCCTGTAAAGCCAGTAGAGGAAATCTTGTGGAGTGTGAATaGACAGGCTTAGATTCCCCTGTCCCTGAGTCGGGGGCATGTGCT +
Preference number: 1 (lower is better)
Translates to: TVPCKASRGNLVECE*TGLDSPVPESGACA
Trigger: AGCACATGCCCCCGACTCAGGGACAGGGGAATCTAAGCCTGTGCATTCACACTCCACAAGATTTCCTCTACTGGCTTTACAGGGCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp TGCATAGTCACGCTAATGGAGGCTTCAAACGAGGGTCTTCCGGTCTaGAGTAGGCACTTTGTCTGGTTTTGCTCCTGGGTTGAGAGTGGC +
Preference number: 1 (lower is better)
Translates to: CIVTLMEASNEGLPV*SRHFVWFCSWVESG
Trigger: GCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTTTGAAGCCTCCATTAGCGTGACTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp CCTGATTGCCAGTTAGCATATGTGTCCGGCTACCAGCCGCCTGACTaGCTGAGGATGCTCTTTGTTTGTTCAAGGATGAACGTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: PDCQLAYVSGYQPPD*LRMLFVCSRMNVLP
Trigger: GGGGAGAACGTTCATCCTTGAACAAACAAAGAGCATCCTCAGCCAGTCAGGCGGCTGGTAGCCGGACACATATGCTAACTGGCAATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp CTGCTGTGTTTCTCCCTGCATGTGGCTGAAGTTTACATTGGAGGGTaGCTTCCTGATTGCCAGTTAGCATATGTGTCCGGCTACCAGCCG +
Preference number: 1 (lower is better)
Translates to: LLCFSLHVAEVYIGG*LPDCQLAYVSGYQP
Trigger: CGGCTGGTAGCCGGACACATATGCTAACTGGCAATCAGGAAGTCACCCTCCAATGTAAACTTCAGCCACATGCAGGGAGAAACACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp GAGGGTCTTCCGGTCTGCAGTAGGCACTTTGTCTGGTTTTGCTCCTaGGTTGAGAGTGGCATTGTGATGTTGTCGGAAGAACATGAACCC +
Preference number: 1 (lower is better)
Translates to: EGLPVCSRHFVWFCS*VESGIVMLSEEHEP
Trigger: GGGTTCATGTTCTTCCGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp GAGGCTTCAAACGAGGGTCTTCCGGTCTGCAGTAGGCACTTTGTCTaGTTTTGCTCCTGGGTTGAGAGTGGCATTGTGATGTTGTCGGAA +
Preference number: 1 (lower is better)
Translates to: EASNEGLPVCSRHFV*FCSWVESGIVMLSE
Trigger: TTCCGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTTTGAAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp GACAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTGACGGATATTATACCGCAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: DNVSFLRIDVEHVGR*LVRRLLTDIIPQEG
Trigger: GCCCTCCTGCGGTATAATATCCGTCAGCAGACGCCTGACAAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp GATTTTCCAGAGTCTCTCGGTCCAGCAGCGCAGGTGACACAACAGTaGCAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTGGGAG +
Preference number: 1 (lower is better)
Translates to: DFPESLGPAAQVTQQ*QCLLSQDRCRTCWE
Trigger: CTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTGTCACTGTTGTGTCACCTGCGCTGCTGGACCGAGAGACTCTGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp GGCCGTAGGAGACGTCGGGTACGAGTGGGTCTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGGCAGAAATTTCATAGTCCAATGGTT +
Preference number: 1 (lower is better)
Translates to: GRRRRRVRVGLHFPL*SAGCGRQKFHSPMV
Trigger: AACCATTGGACTATGAAATTTCTGCCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAGACCCACTCGTACCCGACGTCTCCTACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp CAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCTCATAGCGTAGCTTGTCGTTTCCCT +
Preference number: 1 (lower is better)
Translates to: QLCFSEQLSRHRCSP*SMGSRPHSVACRFP
Trigger: AGGGAAACGACAAGCTACGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568770.5
ENST00000569144.5
3UTR TCA 90 bp GCCTACCAGCTTGAGAGAAAAGGAGTCATGCTGTATTTGTTTCCTTaGGTGAATGGCCACTCAGCTGCTGTGTTTCTCCCTGCATGTGGC +
Preference number: 1 (lower is better)
Translates to: AYQLERKGVMLYLFP*VNGHSAAVFLPACG
Trigger: GCCACATGCAGGGAGAAACACAGCAGCTGAGTGGCCATTCACTCAAGGAAACAAATACAGCATGACTCCTTTTCTCTCAAGCTGGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp AAGAAAATGTCAGCCCTTTTCTTGGCATTTGGTGGTGAAATTGCCTaGTCTGCTCCTCACCTCCTTGGCTCAGGATCACGGCATCAGATG +
Preference number: 1 (lower is better)
Translates to: KKMSALFLAFGGEIA*SAPHLLGSGSRHQM
Trigger: CATCTGATGCCGTGATCCTGAGCCAAGGAGGTGAGGAGCAGAGCAGGCAATTTCACCACCAAATGCCAAGAAAAGGGCTGACATTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp TCAAACGAGGGTCTTCCGGTCTGCAGTAGGCACTTTGTCTGGTTTTaGTCCTGGGTTGAGAGTGGCATTGTGATGTTGTCGGAAGAACAT +
Preference number: 1 (lower is better)
Translates to: SNEGLPVCSRHFVWF*SWVESGIVMLSEEH
Trigger: ATGTTCTTCCGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp CGGGGGCATGTGCTCGTGGAGAATGACCCTATCAAGTTCAAGGTGTaGCATCTCCTGATCCAGCAACAGGATTTGTTCCAGAGAAAAATC +
Preference number: 1 (lower is better)
Translates to: RGHVLVENDPIKFKV*HLLIQQQDLFQRKI
Trigger: GATTTTTCTCTGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGGTCATTCTCCACGAGCACATGCCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp ACGCTCCCTGTGTTCTCATTGATTCTGAAAATTCCTTTAGGCTCTTaGTCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGC +
Preference number: 1 (lower is better)
Translates to: TLPVFSLILKIPLGS*STPFPVSRNLDLSG
Trigger: GCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATTTTCAGAATCAATGAGAACACAGGGAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp GCTGTGGCCGTGCCTGTTAATCCAACATCCAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCATACTTGGGATTTTCCAGAGTCTCT +
Preference number: 1 (lower is better)
Translates to: AVAVPVNPTSSPAIS*ASMISSYLGFSRVS
Trigger: AGAGACTCTGGAAAATCCCAAGTATGAACTGATCATCGAGGCTCAAGATATGGCTGGACTGGATGTTGGATTAACAGGCACGGCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp TTTGTTTCCTTGAGTGAATGGCCACTCAGCTGCTGTGTTTCTCCCTaGATGTGGCTGAAGTTTACATTGGAGGGTGACTTCCTGATTGCC +
Preference number: 1 (lower is better)
Translates to: FVSLSEWPLSCCVSP*MWLKFTLEGDFLIA
Trigger: GGCAATCAGGAAGTCACCCTCCAATGTAAACTTCAGCCACATGCAGGGAGAAACACAGCAGCTGAGTGGCCATTCACTCAAGGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp TCCAGAGAAAAATCCCCAGGTCTTGGGACTGTTGACAGATGGCCATaGCTATGCTTAATGTGGTCATCAACTGAGAATGGTCCGTCTCAT +
Preference number: 1 (lower is better)
Translates to: SREKSPGLGTVDRWP*LCLMWSSTENGPSH
Trigger: ATGAGACGGACCATTCTCAGTTGATGACCACATTAAGCATAGTCATGGCCATCTGTCAACAGTCCCAAGACCTGGGGATTTTTCTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp AGTGCTTCTATAAGCCCCTTTCTCCAAATCTTCATAGCTTCAGAGTaGAAACCTCCCTCGTCCTACACCACCCAACGCTTTTCACCATCT +
Preference number: 1 (lower is better)
Translates to: SASISPFLQIFIASE*KPPSSYTTQRFSPS
Trigger: AGATGGTGAAAAGCGTTGGGTGGTGTAGGACGAGGGAGGTTTTCACTCTGAAGCTATGAAGATTTGGAGAAAGGGGCTTATAGAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp TGTGGTGTCAACAGTCCCATTGATGGGGTTAATATTCAGCCAACCTaGTGGGTCCTTGTAAACAGAATACCTGATGGTTTGATGCTGCAG +
Preference number: 1 (lower is better)
Translates to: CGVNSPIDGVNIQPT*WVLVNRIPDGLMLQ
Trigger: CTGCAGCATCAAACCATCAGGTATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATTAACCCCATCAATGGGACTGTTGACACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp AGGAAAATTGTAGACTCCTTTCCTCAGAATCATCTGGAGAGCTCGTaGCTGGGTGCAACTGCACTAAATCCAGGATCAAACACAGACTTG +
Preference number: 1 (lower is better)
Translates to: RKIVDSFPQNHLESS*LGATALNPGSNTDL
Trigger: CAAGTCTGTGTTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATGATTCTGAGGAAAGGAGTCTACAATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp CCTCATAGTAAAAGGTACTGTTGCTTAACAGTAAGTTGGTCTAGCTaGATAGTCACGCTAATGGAGGCTTCAAACGAGGGTCTTCCGGTC +
Preference number: 1 (lower is better)
Translates to: PHSKRYCCLTVSWSS*IVTLMEASNEGLPV
Trigger: GACCGGAAGACCCTCGTTTGAAGCCTCCATTAGCGTGACTATGCAGCTAGACCAACTTACTGTTAAGCAACAGTACCTTTTACTATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp ATGAATTTCATTTCCTTTGCACAGTGTACAACTCTCATTGGAGGCTaGCAGCCCCCTTTTCTGACAGCAGTATGGAGATACCCACTGATG +
Preference number: 1 (lower is better)
Translates to: MNFISFAQCTTLIGG*QPPFLTAVWRYPLM
Trigger: CATCAGTGGGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACTGTGCAAAGGAAATGAAATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR CCA 90 bp ATACAGATACTCATACATACACCAATACTAACCCACAGACAAAGCTaGGTGCCTGGAGCACTGGCTAGCGACATGTTAACACACCAGAAA +
Preference number: 1 (lower is better)
Translates to: IQILIHTPILTHRQS*VPGALASDMLTHQK
Trigger: TTTCTGGTGTGTTAACATGTCGCTAGCCAGTGCTCCAGGCACCCAGCTTTGTCTGTGGGTTAGTATTGGTGTATGTATGAGTATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp CCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTaGAGTTGTACATTTACTGAGGAGGGAGAGATTCTCTACCATGAT +
Preference number: 1 (lower is better)
Translates to: PVHLFVCMYDLHDDR*SCTFTEEGEILYHD
Trigger: ATCATGGTAGAGAATCTCTCCCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 90 bp TGTAGACTCCTTTCCTCAGAATCATCTGGAGAGCTCGTGCCTGGGTaGAACTGCACTAAATCCAGGATCAAACACAGACTTGTTAAAAAT +
Preference number: 1 (lower is better)
Translates to: CRLLSSESSGELVPG*NCTKSRIKHRLVKN
Trigger: ATTTTTAACAAGTCTGTGTTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATGATTCTGAGGAAAGGAGTCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 90 bp CAACATCTCTTGGGAAAGGCTGTCTCTGATTCTCTGGAATTAAAATaGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: QHLLGKAVSDSLELK*EIPQWTSFVLGQEK
Trigger: CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCCAAGAGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp GAAGGTGTGACTATTTGCTCAGTGGAAATAAAACCCTCAGACCTGTaGTCAGTAATTGGGAAAAGCAATTTCTGGTCCTTACTTGACTTC +
Preference number: 1 (lower is better)
Translates to: EGVTICSVEIKPSDL*SVIGKSNFWSLLDF
Trigger: GAAGTCAAGTAAGGACCAGAAATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCAAATAGTCACACCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp TCTTCCAGACTTTATCAGGAACAGCTTGTTTGTGGATTTCAAATTTaGAAGGATCTGTATTCGGGTGAAGATCCTTATCTGATGCTCCCA +
Preference number: 1 (lower is better)
Translates to: SSRLYQEQLVCGFQI*KDLYSGEDPYLMLP
Trigger: TGGGAGCATCAGATAAGGATCTTCACCCGAATACAGATCCTTTCAAATTTGAAATCCACAAACAAGCTGTTCCTGATAAAGTCTGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 90 bp GGGTATATATGTGTATACAAGATGGTACCTGTACACCTCTTTGTATaGATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACT +
Preference number: 1 (lower is better)
Translates to: GYICVYKMVPVHLFV*MYDLHDDRCSCTFT
Trigger: AGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTACCATCTTGTATACACATATATACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 90 bp GATTTCAAATTTGAAAGGATCTGTATTCGGGTGAAGATCCTTATCTaGTGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACA +
Preference number: 1 (lower is better)
Translates to: DFKFERICIRVKILI*CSQNDYTEVFGIIT
Trigger: TGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCATCAGATAAGGATCTTCACCCGAATACAGATCCTTTCAAATTTGAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 90 bp CTGGAAACTATTAGGAGGAACAACATGACAGAAGTATCTCTGTCCTaGTTAGAACTGTGGGGACAGAGAATATGTTTAAATAAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: LETIRRNNMTEVSLS*LELWGQRICLNKGK
Trigger: CTTTCCCTTATTTAAACATATTCTCTGTCCCCACAGTTCTAATCAGGACAGAGATACTTCTGTCATGTTGTTCCTCCTAATAGTTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACTGGGTGACCCTTCCATaGCGTGGCCGATGTAGGGGC +
Preference number: 2 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDWVTLP*RGRCRG
Trigger: GCCCCTACATCGGCCACGTCATGGAAGGGTCACCCA...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGTGGCAGCATTCAGACTaGACGGGACAGTGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: MNVLPLPCRKRGARCAREWQHSD*TGQWRS
Trigger: ACTTCTCCACTGTCCCGTTCAGTCTGAATGCTGCCA...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCAATGTGGTCATCAACTaGGAATGGTCCGTCTCATCT +
Preference number: 2 (lower is better)
Translates to: LPCRKRGARCARETRDSANVVIN*EWSVSS
Trigger: AGATGAGACGGACCATTCTCAGTTGATGACCACATT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGGAATACCTGATGGTTTaGTGCTGCAGGGAGTCGGGG +
Preference number: 2 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLEYLMV*CCRESG
Trigger: CCCCGACTCCCTGCAGCATCAAACCATCAGGTATTC...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGACGGACCCCAAATaGTCTGTCAAAAATGTGAAC +
Preference number: 2 (lower is better)
Translates to: MNVLPLPCRKRGARCARETTDPK*SVKNVN
Trigger: GTTCACATTTTTGACAGACCATTTGGGGTCCGTCGT...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp AGCGATTACTTCTCTGTCCAAGGTCCGTGTCACGGAGACGCTCCCTGTGTTCTCCCACTCCCTTTCCAGTaGGCCGGAACTTGGACCTTT +
Preference number: 2 (lower is better)
Translates to: SDYFSVQGPCHGDAPCVLPLPFQ*AGTWTF
Trigger: AAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGG...GAGAACACAGGGAGCGTCTCCGTGACACGGACCTTGGACAGAGAAGTAATCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCA +
Preference number: 2 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGSPAIS*ASMISS
Trigger: TGAACTGATCATCGAGGCTCAAGATATGGCTGGACT...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGAGTAGTCATTGTTCCTaGTCCCAGAAGATCAAGTCA +
Preference number: 2 (lower is better)
Translates to: MNVLPLPCRKRGARCARESSHCS*SQKIKS
Trigger: TGACTTGATCTTCTGGGAGCAGGAACAATGACTACT...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGCTCCATGATGACAGGTaGAGTTGTACATTTACTGAG +
Preference number: 2 (lower is better)
Translates to: MNVLPLPCRKRGARCARELHDDR*SCTFTE
Trigger: CTCAGTAAATGTACAACTGCACCTGTCATCATGGAG...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: YQQSPSARSGRVATVNCQEHVGR*LVRRLL
Trigger: CAGCAGACGCCTGACAAGCCATCTCCCAACATGTTC...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACCGATGTAGAACATGTTaGGAGATGGCTTGTCAGGCG +
Preference number: 2 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDRCRTC*EMACQA
Trigger: CGCCTGACAAGCCATCTCCCAACATGTTCTACATCG...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACGTCCAGCAGCGCAGGTaGCACAACAGTGACAATGTC +
Preference number: 2 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHVQQRR*HNSDNV
Trigger: GACATTGTCACTGTTGTGTCACCTGCGCTGCTGGAC...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGTGGATTTCAAAGCTCTaGCCGGGGTTTCCGTTGATG +
Preference number: 2 (lower is better)
Translates to: YQQSPSARSGRVATVNCQWISKL*PGFPLM
Trigger: CATCAACGGAAACCCCGGGCAGAGCTTTGAAATCCA...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGTTGTCAGGCGTCTGCTaGCGGATATTATACCGCAGG +
Preference number: 2 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMLSGVC*RILYRR
Trigger: CCTGCGGTATAATATCCGTCAGCAGACGCCTGACAA...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACTTTTGTCATCGATCATaGTCGTGGCTGTGGCCGTGC +
Preference number: 2 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHFCHRS*SWLWPC
Trigger: GCACGGCCACAGCCACGATCATGATCGATGACAAAA...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACTCCTCGACTGTGGCTTaGAACTCTTTCTTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDSSTVA*NSFLVN
Trigger: ATTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGA...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGATCCCTTCGTTGGTTTaGGGGTTGGTGTGGATTTCA +
Preference number: 2 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLIPSLV*GLVWIS
Trigger: TGAAATCCACACCAACCCTCAAACCAACGAAGGGAT...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAATGTAAACAGAATACCTaGTGGTTTGATGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: QQSPSARSGRVATVNCQECKQNT*WFDAAG
Trigger: CCCTGCAGCATCAAACCATCAGGTATTCTGTTTACA...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATACTCCTGACCTTAAGTaGTCCACCCGCCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SETVSNSAVRAQRSDICHTPDLK*STRLCL
Trigger: GAGGCAGAGGCGGGTGGATCACTTAAGGTCAGGAGT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp GCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTCGTGGTCTCTTGAAGTaGAGCCGCACCTTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: AEIQECSPNLLQMLAAAPRGLLK*SRTLSS
Trigger: GGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACG...AGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
3UTR-3UTR CCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGAAAGCATCCCTTCGTTaGTTTGAGGGTTGGTGTGGA +
Preference number: 2 (lower is better)
Translates to: YQQSPSARSGRVATVNCQKASLR*FEGWCG
Trigger: TCCACACCAACCCTCAAACCAACGAAGGGATGCTTT...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: QQSPSARSGRVATVNCQEKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAAGATTCCCCTGTCCCTaGGTCGGGGGCATGTGCTCG +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVRFPCP*VGGMCS
Trigger: CGAGCACATGCCCCCGACTCAGGGACAGGGGAATCT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp GGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCCTGTGGGTGACCCTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 2 (lower is better)
Translates to: GHLHQRLSSASLWCLWVTLANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...GGTCACCCACAGGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATGGCATTATCGGTGGCTaGGTCATCTGCATCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNGIIGG*VICIKG
Trigger: GCCTTTGATGCAGATGACCCAGCCACCGATAATGCC...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp TGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACCTGTGCCTCCAAGGACTTaGAAATTACAGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: CPLQLCFSEQLSRHRCSPVPPRT*KLQALG
Trigger: ACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCAC...AGGTGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR-3UTR TCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTCGCCCGGGAGACGCGTaGCAGTGCCCTGTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFRPGDA*QCPVKP
Trigger: TGGCTTTACAGGGCACTGTCACGCGTCTCCCGGGCG...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTACAGACAAAGCTGGGTaGCTGGAGCACTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: GISAWNDAHLERTGGIEGTDKAG*LEHWLA
Trigger: CGCTAGCCAGTGCTCCAGGCACCCAGCTTTGTCTGT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp CCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTGACAATTCCGCATCACTGTGGTaGCTGTGGGTGACCCTTCCA +
Preference number: 2 (lower is better)
Translates to: PPCTCGGVILIFNCQIDNSASLW*LWVTLP
Trigger: TGGAAGGGTCACCCACAGGCACCACAGTGATGCGGA...ATTGTCAATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAACCCTCTCTGTGGACCTaGCTGGCTGGTTGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LTSHGREGANNYVILHRKPSLWT*LAGCGS
Trigger: GCTGCCACAACCAGCCAGGCAGGTCCACAGAGAGGG...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAATTTTTCCTGTTGCTATaGAAACTTGGGAGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: QQSPSARSGRVATVNCQEFFLLL*KLGSQA
Trigger: AGCTTGACTCCCAAGTTTCCATAGCAACAGGAAAAA...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 90 bp CCTGGAGGGTTCAGGTGTCTTAGTTTCCACCCACCTTGCTTAACCTaGCAAGGAAGAATGGCATCAAAACGAGGCTTCTCCAGGATAGTC +
Preference number: 2 (lower is better)
Translates to: PGGFRCLSFHPPCLT*QGRMASKRGFSRIV
Trigger: GACTATCCTGGAGAAGCCTCGTTTTGATGCCATTCTTCCTTGCAAGGTTAAGCAAGGTGGGTGGAAACTAAGACACCTGAACCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTCAGGTGACACAACAGTaGCAATGTCTCCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: GSPPCTCGGVILIFNCQIQVTQQ*QCLLSQ
Trigger: CTGAGAAAGGAGACATTGTCACTGTTGTGTCACCTG...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACACAGAGAGGTCCTCCTaGCTGGTCACCATCATGGGG +
Preference number: 2 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYTERSS*LVTIMG
Trigger: CCCCATGATGGTGACCAGGCAGGAGGACCTCTCTGT...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTACCCACAGACAAAGCTaGGTGCCTGGAGCACTGGCT +
Preference number: 2 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVTHRQS*VPGALA
Trigger: AGCCAGTGCTCCAGGCACCCAGCTTTGTCTGTGGGT...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATGAACTTGGACCTTTCTaGCCTGTCACTATCGACTAC +
Preference number: 2 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNELGPF*PVTIDY
Trigger: GTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTC...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACTCATCCGCATCACTGTaGTGCCTGTGGGTGACCCTT +
Preference number: 2 (lower is better)
Translates to: IITDFSYCGVNERGIVIHSSASL*CLWVTL
Trigger: AAGGGTCACCCACAGGCACCACAGTGATGCGGATGA...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp TTTTGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCATCACTGAAGGTCACTTaGGTGACATGGTGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: FCPLQLCFSEQLSRHRCSSLKVT*VTWCAS
Trigger: GGAGGCACACCATGTCACCCAAGTGACCTTCAGTGA...TGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR CAA 90 bp GACGCTCCCTGTGTTCTCATTGATTCTGAAAATTCCTTTAGGCTCTaGATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: DAPCVLIDSENSFRL*IHSLSSEPELGPFW
Trigger: CCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATTTTCAGAATCAATGAGAACACAGGGAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 2 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTATGCCCAGACTGGTCTTaGACTTCTGGCCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: SQCGITFLEKTLERMISLCPDWS*TSGLKP
Trigger: TGGCTTGAGGCCAGAAGTTCAAGACCAGTCTGGGCA...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR GCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGGGTGGCTGGGTCATCTaGATCAAAGGCTGTCATCCG +
Preference number: 2 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGGGWVI*IKGCHP
Trigger: CGGATGACAGCCTTTGATGCAGATGACCCAGCCACC...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGGTGGTGAAATTGCCTaGTCTGCTCCTCACCTCCTT +
Preference number: 2 (lower is better)
Translates to: GISAWNDAHLERTGGIEGGGEIA*SAPHLL
Trigger: AAGGAGGTGAGGAGCAGAGCAGGCAATTTCACCACC...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGAGCTCGTGCCTGGGTaGAACTGCACTAAATCCAGG +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVELVPG*NCTKSR
Trigger: CCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: IITDFSYCGVNERGIVIHGGHYR*LGHLHQ
Trigger: TTGATGCAGATGACCCAGCCACCGATAATGCCCTCC...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp AGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGCCTGGTCACCATCATaGGGTCTGGGTAGAAGACTG +
Preference number: 2 (lower is better)
Translates to: RLTRACVLLILEIFQTLSAWSPS*GLGRRL
Trigger: CAGTCTTCTACCCAGACCCCATGATGGTGACCAGGC...TGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGTGGACCTGCCTGGCTaGTTGTGGCAGCATTCAGAC +
Preference number: 2 (lower is better)
Translates to: LTSHGREGANNYVILHRKVDLPG*LWQHSD
Trigger: GTCTGAATGCTGCCACAACCAGCCAGGCAGGTCCAC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAAGCCTCCTGAGTAGCTaGGGTTTCAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVSLLSS*GFRCAP
Trigger: TGGTGCACACCTGAAACCCCAGCTACTCAGGAGGCT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 90 bp TTCATAGTCCAATGGTTTGACAACAGAAAGCATCCCTTCGTTGGTTaGAGGGTTGGTGTGGATTTCAAAGCTCTGCCCGGGGTTTCCGTT +
Preference number: 2 (lower is better)
Translates to: FIVQWFDNRKHPFVG*RVGVDFKALPGVSV
Trigger: AACGGAAACCCCGGGCAGAGCTTTGAAATCCACACCAACCCTCAAACCAACGAAGGGATGCTTTCTGTTGTCAAACCATTGGACTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 90 bp CAGTCACTGAAGGTCACTTGGGTGACATGGTGTGCCTCCAAGGACTaGAAAATTACAGGCACTGGGTTGCTGCTGTTAACTAAGCATCTT +
Preference number: 2 (lower is better)
Translates to: QSLKVTWVTWCASKD*KITGTGLLLLTKHL
Trigger: AAGATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGACCTTCAGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR-3UTR TCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTATCTTGAGCCTCGATaGTCAGTTCATACTTGGGAT +
Preference number: 2 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNYLEPR*SVHTWD
Trigger: ATCCCAAGTATGAACTGATCATCGAGGCTCAAGATA...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp TTTGGCATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCCTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: FGIITDFSYCGVNERGIVLHFPL*SAGCGR
Trigger: CCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAG...GACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGATGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTAACTCTCATTGGAGGCTaGCAGCCCCCTTTTCTGACA +
Preference number: 2 (lower is better)
Translates to: SQCGITFLEKTLERMISLTLIGG*QPPFLT
Trigger: TGTCAGAAAAGGGGGCTGTCAGCCTCCAATGAGAGT...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR GCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTGCTGTGTTTCTCCCTaGATGTGGCTGAAGTTTACA +
Preference number: 2 (lower is better)
Translates to: SETVSNSAVRAQRSDICHCCVSP*MWLKFT
Trigger: TGTAAACTTCAGCCACATGCAGGGAGAAACACAGCA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp GTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGCAGATTTCCTTCTCATaGGAGCCCAGGCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: VTWVTWCASKDLKITGTGQISFS*EPRLLK
Trigger: TTTTAAAAGCCTGGGCTCCCATGAGAAGGAAATCTG...CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR-3UTR CCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGGGGCATGTGCTCGTaGAGAATGACCCTATCAAGT +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGGMCS*RMTLSS
Trigger: ACTTGATAGGGTCATTCTCCACGAGCACATGCCCCC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp CAGATTTTGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTTCTGATCAATCACAATaGCTTCCAGAGGCACCGGCC +
Preference number: 2 (lower is better)
Translates to: QILKKAYQGVCIVDLGDLSDQSQ*LPEAPA
Trigger: GGCCGGTGCCTCTGGAAGTCATTGTGATTGATCAGA...AAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR TCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTGCTTCGGAGCAAAAGTaGCAGCTCTGTGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFASEQK*QLCGLS
Trigger: GGACAGACCACAGAGCTGTCACTTTTGCTCCGAAGC...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATCTACAGAAGGCTAACTaGAAGCACAAGTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: SETVSNSAVRAQRSDICHLQKAN*KHKCKH
Trigger: ATGTTTGCACTTGTGCTTTCAGTTAGCCTTCTGTAG...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAAGTTTCCACCCACCTTaGTTAACCTTGCAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: PYQVQGVASPDPATGFVPSFHPP*LTLQGR
Trigger: TCTTCCTTGCAAGGTTAAGCAAGGTGGGTGGAAACT...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCTTGTGGAGTGTGAATaGACAGGCTTAGATTCCCCT +
Preference number: 2 (lower is better)
Translates to: GISAWNDAHLERTGGIEGLVECE*TGLDSP
Trigger: AGGGGAATCTAAGCCTGTGCATTCACACTCCACAAG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACTCCATGCACCTGTGGTaGGGTCATCCTTATCTTCAA +
Preference number: 2 (lower is better)
Translates to: IITDFSYCGVNERGIVIHSMHLW*GHPYLQ
Trigger: TTGAAGATAAGGATGACCCCACCACAGGTGCATGGA...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp CAGATTTTGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCCTCCATGCACCTGTaGTGGGGTCATCCTTATCTT +
Preference number: 2 (lower is better)
Translates to: QILKKAYQGVCIVDLGDLPSMHL*WGHPYL
Trigger: AAGATAAGGATGACCCCACCACAGGTGCATGGAGGG...AAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGCACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: CVLLILEIFQTLSGTACLHHHGV*VEDWAL
Trigger: GAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTG...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 90 bp GTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGTaGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCAGATTTC +
Preference number: 2 (lower is better)
Translates to: VTWCASKDLKITGTG*LLLTKHLALSTADF
Trigger: GAAATCTGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR CAA 90 bp CTCACCTCCTTGGCTCAGGATCACGGCATCAGATGGCAGTGTAAATaGGTTGTAGTCCTCGAACTCAATAAAGAGAAAGGACTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: LTSLAQDHGIRWQCK*VVVLELNKEKGLLS
Trigger: AGAAAGAAGTCCTTTCTCTTTATTGAGTTCGAGGACTACAACCAATTTACACTGCCATCTGATGCCGTGATCCTGAGCCAAGGAGGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACCGAGAGTTTTGCCATTaGCATCAGTGGTCTCCACAA +
Preference number: 2 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYREFCH*HQWSPQ
Trigger: TTGTGGAGACCACTGATGTCAATGGCAAAACTCTCG...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp AGTGACAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTGGGAGATGGCTTGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SDNVSFLRIDVEHVGRWLGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...AAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp AGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGACGTCGGGTACGAGTaGGTCTTCATTTTCCACTTT +
Preference number: 2 (lower is better)
Translates to: RLTRACVLLILEIFQTLSDVGYE*VFIFHF
Trigger: AAAGTGGAAAATGAAGACCCACTCGTACCCGACGTC...TGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTCTCTGTGGACCTGCCTaGCTGGTTGTGGCAGCATTC +
Preference number: 2 (lower is better)
Translates to: MMLIWRELAVLKVTFIEILCGPA*LVVAAF
Trigger: GAATGCTGCCACAACCAGCCAGGCAGGTCCACAGAG...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGAGTGTGATGGTAGATaGTTGTTCCATTTATCAGAC +
Preference number: 2 (lower is better)
Translates to: SETVSNSAVRAQRSDICHECDGR*LFHLSD
Trigger: GTCTGATAAATGGAACAACCATCTACCATCACACTC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTAAATCTTGTGGAGTGTaGATGCACAGGCTTAGATTC +
Preference number: 2 (lower is better)
Translates to: GISAWNDAHLERTGGIEGKSCGV*MHRLRF
Trigger: GAATCTAAGCCTGTGCATTCACACTCCACAAGATTT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATGAAGTATCTCTGTCCTaGTTAGAACTGTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNEVSLS*LELWGQ
Trigger: CTGTCCCCACAGTTCTAATCAGGACAGAGATACTTC...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATATTTGCCCCTTTGAATaGTTTATAGCAAAGCACAGT +
Preference number: 2 (lower is better)
Translates to: SETVSNSAVRAQRSDICHICPFE*FIAKHS
Trigger: ACTGTGCTTTGCTATAAATCATTCAAAGGGGCAAAT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGCACTATCGACTACCTTaGCAACATCTCTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGHYRLP*QHLLGK
Trigger: CTTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTG...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGTCGTGGCTGTGGCCGTaGCTGTTAATCCAACATCCA +
Preference number: 2 (lower is better)
Translates to: CVLLILEIFQTLSGTACLSWLWP*LLIQHP
Trigger: TGGATGTTGGATTAACAGGCACGGCCACAGCCACGA...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR GCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTAAGGACTTCTTTCTCTaGTCTCCCTCTCTGTGGACC +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFKDFFL*SPSLWT
Trigger: GGTCCACAGAGAGGGAGAGCAGAGAAAGAAGTCCTT...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTGTTCGGTTCACAAAGTaGAGGAGAGCCTACCAGCTT +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFVRFTK*RRAYQL
Trigger: AAGCTGGTAGGCTCTCCTGCACTTTGTGAACCGAAC...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGTGCCTGGGTGCAACTaGACTAAATCCAGGATCAAA +
Preference number: 2 (lower is better)
Translates to: LTSHGREGANNYVILHRKVPGCN*TKSRIK
Trigger: TTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCAC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATGTTTCCTTGAGTGAATaGCCACTCAGCTGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNVSLSE*PLSCCV
Trigger: AACACAGCAGCTGAGTGGCCATTCACTCAAGGAAAC...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGATTCAGCCAACCTGCTaGGTCCTTGTAAACAGAATA +
Preference number: 2 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGIQPTC*VLVNRI
Trigger: TATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAAT...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGGATCACGGCATCAGATaGCAGTGTAAATTGGTTGTA +
Preference number: 2 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRDHGIR*QCKLVV
Trigger: TACAACCAATTTACACTGCCATCTGATGCCGTGATC...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTGAATCAGTACGACTGTaGATTCGGGACACATACAAA +
Preference number: 2 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVESVRL*IRDTYK
Trigger: TTTGTATGTGTCCCGAATCCACAGTCGTACTGATTC...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 90 bp GGCATGAGCCATCACACCCGACTGCATCTGATCAGTTTAGATCAGTaGTTTCCATATTCTTCATTTCCAGTTGTTAAGCAAGGTACTCAA +
Preference number: 2 (lower is better)
Translates to: GMSHHTRLHLISLDQ*FPYSSFPVVKQGTQ
Trigger: TTGAGTACCTTGCTTAACAACTGGAAATGAAGAATATGGAAACAACTGATCTAAACTGATCAGATGCAGTCGGGTGTGATGGCTCATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTAGTGCAAACATAGATTaGATAAGAAAGCGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GISAWNDAHLERTGGIEGSANID*IRKRVC
Trigger: ACACACACGCTTTCTTATGCAATCTATGTTTGCACT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTTTTTCCTGTTGCTATaGAAACTTGGGAGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVFFLLL*KLGSQA
Trigger: AGCTTGACTCCCAAGTTTCCATAGCAACAGGAAAAA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CGTAGCTTGTCGTTTCCCTTACAGTCACTGAAGGTCAAGTTTAGAATTGACTGGCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 2 (lower is better)
Translates to: RSLSFPLQSLKVKFRIDWLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...CCAGTCAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAAACGACAAGCTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
3UTR-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTGACAAGATGAGTCCATaGCCCATGCTGAGAACTGGT +
Preference number: 2 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIDKMSP*PMLRTG
Trigger: ACCAGTTCTCAGCATGGGCCATGGACTCATCTTGTC...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGCGAAGTTAATCTTCTaGTTCGGTTCACAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LTSHGREGANNYVILHRKAKLIF*FGSQSA
Trigger: TGCACTTTGTGAACCGAACCAGAAGATTAACTTCGC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGATTTTGTACAGTGTaGGCACATAATAAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGFCTV*AHNKQL
Trigger: CAACTGCTTATTATGTGCCCACACTGTACAAAATCC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTGGAGGCCACTTACCTTaGGCAAGCCATTCAATTTTT +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFGGHLP*ASHSIF
Trigger: AAAAATTGAATGGCTTGCCCAAGGTAAGTGGCCTCC...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTTTCTCTCCCCTCAGTTaGTTTGGTAGTGAATGGGTA +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFFSPLS*FGSEWV
Trigger: TACCCATTCACTACCAAACCAACTGAGGGGAGAGAA...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 90 bp CATGTGGGTATATATGTGTATACAAGATGGTACCTGTACACCTCTTaGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACAT +
Preference number: 2 (lower is better)
Translates to: HVGIYVYTRWYLYTS*YACMTSMMTGAVVH
Trigger: ATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTACCATCTTGTATACACATATATACCCACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
3UTR-3UTR TCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACTTTCCGCTTTTACATaGTCACAGAATACAAATCAG +
Preference number: 2 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVLSAFT*SQNTNQ
Trigger: CTGATTTGTATTCTGTGAGCATGTAAAAGCGGAAAG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATTTTTCCTGTTGCTATaGAAACTTGGGAGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSFFLLL*KLGSQA
Trigger: AGCTTGACTCCCAAGTTTCCATAGCAACAGGAAAAA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
3UTR-3UTR CCA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATGTGTACAACTCTCATTaGAGGCTGACAGCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDVYNSH*RLTAPF
Trigger: AAAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACAC...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR TCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGCATAGTCCAATGGTTTaGCAACAGAAAGCATCCCTT +
Preference number: 2 (lower is better)
Translates to: CVLLILEIFQTLSGTACLHSPMV*QQKASL
Trigger: AAGGGATGCTTTCTGTTGTCAAACCATTGGACTATG...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGTCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 2 (lower is better)
Translates to: CVLLILEIFQTLSGTACLSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 90 bp TGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTaGTTTGTGGATTTCAAATTTGAAAGGATCTGTATTCGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: CIVDLGDLPDFIRNS*FVDFKFERICIRVK
Trigger: CTTCACCCGAATACAGATCCTTTCAAATTTGAAATCCACAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 90 bp GTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATaGAAGGTGACTTTTATTGAAATTAGAAAATGTGTGCATATTCTT +
Preference number: 2 (lower is better)
Translates to: VYLPGMMLIWRELAV*KVTFIEIRKCVHIL
Trigger: AAGAATATGCACACATTTTCTAATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR TCA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATGGAAATACCACATCCTaGGACACAGTCATAAACATT +
Preference number: 2 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDGNTTS*DTVINI
Trigger: AATGTTTATGACTGTGTCTCAGGATGTGGTATTTCC...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCTGCTCCTCACCTCCTaGGCTCAGGATCACGGCATC +
Preference number: 3 (lower is better)
Translates to: LPCRKRGARCARETRDSALLLTS*AQDHGI
Trigger: GATGCCGTGATCCTGAGCCAAGGAGGTGAGGAGCAG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTCCAGTGAGCCGGAACTaGGACCTTTCTGGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGPVSRN*DLSGLS
Trigger: TGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGG...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp CAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTaGCAGTGCCCTGTAAAGCCAGTAGAGGAAATCTTG +
Preference number: 3 (lower is better)
Translates to: QEEGSKVRPGDA*QCPVKPVEEIL
Trigger: CAAGATTTCCTCTACTGGCTTTACAGGGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp AGAGAGGTCCTCCTGCCTGGTCACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTCGTTGACATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: REVLLPGHHHGV*VEDWALVDIQD
Trigger: GTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTGACCAGGCAGGAGGACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGTGTTGCTATGGAAACTaGGGAGTCAAGCTTCAGACG +
Preference number: 3 (lower is better)
Translates to: MNVLPLPCRKRGARCARECCYGN*GVKLQT
Trigger: CGTCTGAAGCTTGACTCCCAAGTTTCCATAGCAACA...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp ATACCGCAGGAGGGCATTATCGGTGGCTGGGTCATCTaGATCAAAGGCTGTCATCCGCATCACTGTGGTGCC +
Preference number: 3 (lower is better)
Translates to: IPQEGIIGGWVI*IKGCHPHHCGA
Trigger: GGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACCCAGCCACCGATAATGCCCTCCTGCGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGCATCCCTTCGTTGGTTaGAGGGTTGGTGTGGATTTC +
Preference number: 3 (lower is better)
Translates to: YQQSPSARSGRVATVNCQHPFVG*RVGVDF
Trigger: GAAATCCACACCAACCCTCAAACCAACGAAGGGATG...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAGTCCTCATGCTGACCTaGATGCGGGAGGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: PYQVQGVASPDPATGFVPVLMLT*MREALE
Trigger: CTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGAC...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp GGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATaGACCTGTGGTGGGGTCATCCTTATCTTCAACTGT +
Preference number: 3 (lower is better)
Translates to: GVSVDDGVGSPP*TCGGVILIFNC
Trigger: ACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 72 bp GCTGACGGATATTATACCGCAGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAAAGGCTGTCATCCGCA +
Preference number: 3 (lower is better)
Translates to: ADGYYTAGGHYR*LGHLHQRLSSA
Trigger: TGCGGATGACAGCCTTTGATGCAGATGACCCAGCCACCGATAATGCCCTCCTGCGGTATAATATCCGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 72 bp GGTCTTCCGGTCTGCAGTAGGCACTTTGTCTGGTTTTaGTCCTGGGTTGAGAGTGGCATTGTGATGTTGTCG +
Preference number: 3 (lower is better)
Translates to: GLPVCSRHFVWF*SWVESGIVMLS
Trigger: CGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp ACGCTAATGGAGGCTTCAAACGAGGGTCTTCCGGTCTaGAGTAGGCACTTTGTCTGGTTTTGCTCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: TLMEASNEGLPV*SRHFVWFCSWV
Trigger: AACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTTTGAAGCCTCCATTAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp CACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTaGCCTGTCACTATCGACTACCTTGCCAACATCTCT +
Preference number: 3 (lower is better)
Translates to: HSLSSEPELGPF*PVTIDYLANIS
Trigger: AGAGATGTTGGCAAGGTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 72 bp AACGAGGGTCTTCCGGTCTGCAGTAGGCACTTTGTCTaGTTTTGCTCCTGGGTTGAGAGTGGCATTGTGATG +
Preference number: 3 (lower is better)
Translates to: NEGLPVCSRHFV*FCSWVESGIVM
Trigger: CATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGGTGTCAACAGTCCCATaGATGGGGTTAATATTCAGC +
Preference number: 3 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLVSTVP*MGLIFS
Trigger: GCTGAATATTAACCCCATCAATGGGACTGTTGACAC...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 3 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAATGATCAGTTCATACTaGGGATTTTCCAGAGTCTCT +
Preference number: 3 (lower is better)
Translates to: QQSPSARSGRVATVNCQEMISSY*GFSRVS
Trigger: AGAGACTCTGGAAAATCCCAAGTATGAACTGATCAT...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TTGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACCTGTGCCTCCAAGGACTaGAAAATTACAGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: LPTAVMFLRATKPPSLFTCASKD*KITGTG
Trigger: CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACA...GGTGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR-3UTR CAA 90 bp TTTTGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCAGTCACTGAAGGTCACTaGGGTGACATGGTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: FCPLQLCFSEQLSRHRCSVTEGH*GDMVCL
Trigger: GAGGCACACCATGTCACCCAAGTGACCTTCAGTGAC...TGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR TCA 72 bp GAAAGATCGGTCGGTTGTCATTCTGATCAATCACAATaGCTTCCAGAGGCACCGGCCCCTCGAGAGTTTTGC +
Preference number: 3 (lower is better)
Translates to: ERSVGCHSDQSQ*LPEAPAPREFC
Trigger: GCAAAACTCTCGAGGGGCCGGTGCCTCTGGAAGTCATTGTGATTGATCAGAATGACAACCGACCGATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp TTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCTCATAGCGTAGCTTGT +
Preference number: 3 (lower is better)
Translates to: FSEQLSRHRCSP*SMGSRPHSVAC
Trigger: ACAAGCTACGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568770.5
ENST00000569144.5
3UTR TCA 72 bp TTGCCAGTTAGCATATGTGTCCGGCTACCAGCCGCCTaGCTGGCTGAGGATGCTCTTTGTTTGTTCAAGGAT +
Preference number: 3 (lower is better)
Translates to: LPVSICVRLPAA*LAEDALCLFKD
Trigger: ATCCTTGAACAAACAAAGAGCATCCTCAGCCAGTCAGGCGGCTGGTAGCCGGACACATATGCTAACTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp TGTAAAGCCAGTAGAGGAAATCTTGTGGAGTGTGAATaGACAGGCTTAGATTCCCCTGTCCCTGAGTCGGGG +
Preference number: 3 (lower is better)
Translates to: CKASRGNLVECE*TGLDSPVPESG
Trigger: CCCCGACTCAGGGACAGGGGAATCTAAGCCTGTGCATTCACACTCCACAAGATTTCCTCTACTGGCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp CAGTTAGCATATGTGTCCGGCTACCAGCCGCCTGACTaGCTGAGGATGCTCTTTGTTTGTTCAAGGATGAAC +
Preference number: 3 (lower is better)
Translates to: QLAYVSGYQPPD*LRMLFVCSRMN
Trigger: GTTCATCCTTGAACAAACAAAGAGCATCCTCAGCCAGTCAGGCGGCTGGTAGCCGGACACATATGCTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGTCACTATCGACTACCTaGCCAACATCTCTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMSLSTT*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTGA...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TGGAGGCTGACAGCCCCCTTTTCTGACAGCAGTATGGAGATACCCACTGATGATCTATTAACCTCTAAGTaGGCCAGGCCCTCATTCAAG +
Preference number: 3 (lower is better)
Translates to: WRLTAPFSDSSMEIPTDDLLTSK*ARPSFK
Trigger: CTTGAATGAGGGCCTGGCCAACTTAGAGGTTAATAG...ATCATCAGTGGGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTCAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR CAA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACATTTGGTGGTGAAATaGCCTGCTCTGCTCCTCACC +
Preference number: 3 (lower is better)
Translates to: PYQVQGVASPDPATGFVPHLVVK*PALLLT
Trigger: GGTGAGGAGCAGAGCAGGCAATTTCACCACCAAATG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp CTTCCAGAGGCACCGGCCCCTCGAGAGTTTTGCCATTaGCATCAGTGGTCTCCACAAATAGTTGATAAACAG +
Preference number: 3 (lower is better)
Translates to: LPEAPAPREFCH*HQWSPQIVDKQ
Trigger: CTGTTTATCAACTATTTGTGGAGACCACTGATGTCAATGGCAAAACTCTCGAGGGGCCGGTGCCTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp AATGGTTTGACAACAGAAAGCATCCCTTCGTTGGTTTaGGGGTTGGTGTGGATTTCAAAGCTCTGCCCGGGG +
Preference number: 3 (lower is better)
Translates to: NGLTTESIPSLV*GLVWISKLCPG
Trigger: CCCCGGGCAGAGCTTTGAAATCCACACCAACCCTCAAACCAACGAAGGGATGCTTTCTGTTGTCAAACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp TTCTCCCTGCATGTGGCTGAAGTTTACATTGGAGGGTaGCTTCCTGATTGCCAGTTAGCATATGTGTCCGGC +
Preference number: 3 (lower is better)
Translates to: FSLHVAEVYIGG*LPDCQLAYVSG
Trigger: GCCGGACACATATGCTAACTGGCAATCAGGAAGTCACCCTCCAATGTAAACTTCAGCCACATGCAGGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp TTGTCTGGTTTTGCTCCTGGGTTGAGAGTGGCATTGTaGTGTTGTCGGAAGAACATGAACCCTGGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: LSGFAPGLRVAL*CCRKNMNPGAR
Trigger: TCTGGCTCCAGGGTTCATGTTCTTCCGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp GTAGACTCCTTTCCTCAGAATCATCTGGAGAGCTCGTaGCTGGGTGCAACTGCACTAAATCCAGGATCAAAC +
Preference number: 3 (lower is better)
Translates to: VDSFPQNHLESS*LGATALNPGSN
Trigger: GTTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATGATTCTGAGGAAAGGAGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp CTCCTCACCTCCTTGGCTCAGGATCACGGCATCAGATaGCAGTGTAAATTGGTTGTAGTCCTCGAACTCAAT +
Preference number: 3 (lower is better)
Translates to: LLTSLAQDHGIR*QCKLVVVLELN
Trigger: ATTGAGTTCGAGGACTACAACCAATTTACACTGCCATCTGATGCCGTGATCCTGAGCCAAGGAGGTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp GGTGGACAAGATGAGTCCATGGCCCATGCTGAGAACTaGTACTTCTGTCTTCATAGACTCACTCACCAACCA +
Preference number: 3 (lower is better)
Translates to: GGQDESMAHAEN*YFCLHRLTHQP
Trigger: TGGTTGGTGAGTGAGTCTATGAAGACAGAAGTACCAGTTCTCAGCATGGGCCATGGACTCATCTTGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp GTGCTCGTGGAGAATGACCCTATCAAGTTCAAGGTGTaGCATCTCCTGATCCAGCAACAGGATTTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: VLVENDPIKFKV*HLLIQQQDLFQ
Trigger: CTGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGGTCATTCTCCACGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp GATAGCCTGAGGTTTGGTTCTGGAGGCCACTTACCTTaGGCAAGCCATTCAATTTTTCTGAGCCTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: DSLRFGSGGHLP*ASHSIFLSLSL
Trigger: AAGGCTGAGGCTCAGAAAAATTGAATGGCTTGCCCAAGGTAAGTGGCCTCCAGAACCAAACCTCAGGCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTAATTCCTTTAGGCTCTaGATCCACTCCCTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: GSPPCTCGGVILIFNCQINSFRL*IHSLSS
Trigger: ACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATT...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACGGCCCCTCGAGAGTTTaGCCATTGACATCAGTGGTC +
Preference number: 3 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYGPSRV*PLTSVV
Trigger: GACCACTGATGTCAATGGCAAAACTCTCGAGGGGCC...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATCCACCTTGCTTAACCTaGCAAGGAAGAATGGCATCA +
Preference number: 3 (lower is better)
Translates to: SETVSNSAVRAQRSDICHPPCLT*QGRMAS
Trigger: TGATGCCATTCTTCCTTGCAAGGTTAAGCAAGGTGG...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp CTTACAGTCACTGAAGGTCACTTGGGTGACATGGTGTaGCTCCAAGGACTTGAAAATTACAGGCACTGGGTT +
Preference number: 3 (lower is better)
Translates to: LTVTEGHLGDMV*LQGLENYRHWV
Trigger: AACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGACCTTCAGTGACTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR GCA 72 bp CCTGGAGGGTTCAGGTGTCTTAGTTTCCACCCACCTTaGTTAACCTTGCAAGGAAGAATGGCATCAAAACGA +
Preference number: 3 (lower is better)
Translates to: PGGFRCLSFHPP*LTLQGRMASKR
Trigger: TCGTTTTGATGCCATTCTTCCTTGCAAGGTTAAGCAAGGTGGGTGGAAACTAAGACACCTGAACCCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp CTTTCCTCAGAATCATCTGGAGAGCTCGTGCCTGGGTaGAACTGCACTAAATCCAGGATCAAACACAGACTT +
Preference number: 3 (lower is better)
Translates to: LSSESSGELVPG*NCTKSRIKHRL
Trigger: AAGTCTGTGTTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATGATTCTGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp TCCTTTCTCAGGATCGATGTAGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTGACGGATATTATACCG +
Preference number: 3 (lower is better)
Translates to: SFLRIDVEHVGR*LVRRLLTDIIP
Trigger: CGGTATAATATCCGTCAGCAGACGCCTGACAAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 72 bp CAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTaGGAGATGGCTTGTCAGGCGTCTGCTGACGGATAT +
Preference number: 3 (lower is better)
Translates to: QCLLSQDRCRTC*EMACQASADGY
Trigger: ATATCCGTCAGCAGACGCCTGACAAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 72 bp CTCATACATACACCAATACTAACCCACAGACAAAGCTaGGTGCCTGGAGCACTGGCTAGCGACATGTTAACA +
Preference number: 3 (lower is better)
Translates to: LIHTPILTHRQS*VPGALASDMLT
Trigger: TGTTAACATGTCGCTAGCCAGTGCTCCAGGCACCCAGCTTTGTCTGTGGGTTAGTATTGGTGTATGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACGCAGTGTACACGCTGTaGTCGACAAATGGGGACTCA +
Preference number: 3 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYAVYTL*STNGDS
Trigger: TGAGTCCCCATTTGTCGACAACAGCGTGTACACTGC...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGTGTACAACTCTCATaGGAGGCTGACAGCCCCCTT +
Preference number: 3 (lower is better)
Translates to: HKSQCGITFLEKTLERMISVQLS*EADSPL
Trigger: AAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACT...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTACCTGTACACCTCTTaGTATGCATGTATGACCTCC +
Preference number: 3 (lower is better)
Translates to: SETVSNSAVRAQRSDICHYLYTS*YACMTS
Trigger: GGAGGTCATACATGCATACAAAGAGGTGTACAGGTA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTGGCTGAAGTTTACATaGGAGGGTGACTTCCTGATT +
Preference number: 3 (lower is better)
Translates to: SETVSNSAVRAQRSDICHWLKFT*EGDFLI
Trigger: AATCAGGAAGTCACCCTCCAATGTAAACTTCAGCCA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp CCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTGACAATTCGAGAGTTTTGCCATaGACATCAGTGGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: PPCTCGGVILIFNCQIDNSRVLP*TSVVST
Trigger: TGTGGAGACCACTGATGTCAATGGCAAAACTCTCGA...ATTGTCAATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACAGGTCTTGGGACTGTaGACAGATGGCCATGACTAT +
Preference number: 3 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVQVLGL*TDGHDY
Trigger: ATAGTCATGGCCATCTGTCAACAGTCCCAAGACCTG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGGAGAGCCTACCAGCTaGAGAGAAAAGGAGTCATGC +
Preference number: 3 (lower is better)
Translates to: LTSHGREGANNYVILHRKGEPTS*REKESC
Trigger: GCATGACTCCTTTTCTCTCAAGCTGGTAGGCTCTCC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp AGACGTCGGGTACGAGTGGGTCTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGGCAGAAATTTCATAGT +
Preference number: 3 (lower is better)
Translates to: RRRVRVGLHFPL*SAGCGRQKFHS
Trigger: ACTATGAAATTTCTGCCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAGACCCACTCGTACCCGACGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp GAGGCCACTTACCTTGGGCAAGCCATTCAATTTTTCTaGGCCTCAGCCTTCTTTATCTGTGAGTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: EATYLGQAIQFF*ASAFFICELEK
Trigger: CTTCTCCAACTCACAGATAAAGAAGGCTGAGGCTCAGAAAAATTGAATGGCTTGCCCAAGGTAAGTGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp ATAAGCCCCTTTCTCCAAATCTTCATAGCTTCAGAGTaGAAACCTCCCTCGTCCTACACCACCCAACGCTTT +
Preference number: 3 (lower is better)
Translates to: ISPFLQIFIASE*KPPSSYTTQRF
Trigger: AAAGCGTTGGGTGGTGTAGGACGAGGGAGGTTTTCACTCTGAAGCTATGAAGATTTGGAGAAAGGGGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp GAATCAGTACGACTGTGGATTCGGGACACATACAAATaGAGGTTGGTGCCCATGAAAGAAAATGTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: ESVRLWIRDTYK*RLVPMKENVSP
Trigger: AGGGCTGACATTTTCTTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp TTCAGCGAAGTTAATCTTCTGGTTCGGTTCACAAAGTaGAGGAGAGCCTACCAGCTTGAGAGAAAAGGAGTC +
Preference number: 3 (lower is better)
Translates to: FSEVNLLVRFTK*RRAYQLERKGV
Trigger: GACTCCTTTTCTCTCAAGCTGGTAGGCTCTCCTGCACTTTGTGAACCGAACCAGAAGATTAACTTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGCCCTTTTCTTGGCATTaGGTGGTGAAATTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRPFSWH*VVKLPA
Trigger: AGCAGGCAATTTCACCACCAAATGCCAAGAAAAGGG...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGTCAGCCCTTTTCTaGGCATTTGGTGGTGAAATT +
Preference number: 3 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPMSALF*AFGGEI
Trigger: AATTTCACCACCAAATGCCAAGAAAAGGGCTGACAT...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTGGGTAAAATGCAATTaGAGCTACTCTATGAGTGTG +
Preference number: 3 (lower is better)
Translates to: SETVSNSAVRAQRSDICHWVKCN*SYSMSV
Trigger: CACACTCATAGAGTAGCTCAAATTGCATTTTACCCA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp GTGCCTGTTAATCCAACATCCAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCATACTTGGGATTTTCC +
Preference number: 3 (lower is better)
Translates to: VPVNPTSSPAIS*ASMISSYLGFS
Trigger: GGAAAATCCCAAGTATGAACTGATCATCGAGGCTCAAGATATGGCTGGACTGGATGTTGGATTAACAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp TTGTTCCAGAGAAAAATCCCCAGGTCTTGGGACTGTTaGCAGATGGCCATGACTATGCTTAATGTGGTCATC +
Preference number: 3 (lower is better)
Translates to: LFQRKIPRSWDC*QMAMTMLNVVI
Trigger: GATGACCACATTAAGCATAGTCATGGCCATCTGTCAACAGTCCCAAGACCTGGGGATTTTTCTCTGGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp CTTGAGAGAAAAGGAGTCATGCTGTATTTGTTTCCTTaGGTGAATGGCCACTCAGCTGCTGTGTTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: LERKGVMLYLFP*VNGHSAAVFLP
Trigger: AGGGAGAAACACAGCAGCTGAGTGGCCATTCACTCAAGGAAACAAATACAGCATGACTCCTTTTCTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp TCAGAATCATCTGGAGAGCTCGTGCCTGGGTGCAACTaGACTAAATCCAGGATCAAACACAGACTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: SESSGELVPGCN*TKSRIKHRLVK
Trigger: TTTAACAAGTCTGTGTTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATGATTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp AGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCATTCCTCGACTGTGGCTaGAAACTCTTTCTTGGTGAA +
Preference number: 3 (lower is better)
Translates to: RLTRACVLLILEIFQTLSFLDCG*KLFLGE
Trigger: TTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGAA...TGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGAGCCAAAGTCTTATTaGATACCTACCATGAAATCT +
Preference number: 3 (lower is better)
Translates to: SETVSNSAVRAQRSDICHEPKSY*IPTMKS
Trigger: AGATTTCATGGTAGGTATCAAATAAGACTTTGGCTC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp AGTGCTTGGGTTTCCTGTTGGTGTGACTTACCCTGTTaGCTCATGTTTAAGGCAGCTACACGTAAACAGATT +
Preference number: 3 (lower is better)
Translates to: SAWVSCWCDLPC*LMFKAATRKQI
Trigger: AATCTGTTTACGTGTAGCTGCCTTAAACATGAGTCAACAGGGTAAGTCACACCAACAGGAAACCCAAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp AACAGTCCCATTGATGGGGTTAATATTCAGCCAACCTaGTGGGTCCTTGTAAACAGAATACCTGATGGTTTG +
Preference number: 3 (lower is better)
Translates to: NSPIDGVNIQPT*WVLVNRIPDGL
Trigger: CAAACCATCAGGTATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATTAACCCCATCAATGGGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR GCA 72 bp CTCTTTGTATGCATGTATGACCTCCATGATGACAGGTaGAGTTGTACATTTACTGAGGAGGGAGAGATTCTC +
Preference number: 3 (lower is better)
Translates to: LFVCMYDLHDDR*SCTFTEEGEIL
Trigger: GAGAATCTCTCCCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR GCA 72 bp AAAAGGTACTGTTGCTTAACAGTAAGTTGGTCTAGCTaGATAGTCACGCTAATGGAGGCTTCAAACGAGGGT +
Preference number: 3 (lower is better)
Translates to: KRYCCLTVSWSS*IVTLMEASNEG
Trigger: ACCCTCGTTTGAAGCCTCCATTAGCGTGACTATGCAGCTAGACCAACTTACTGTTAAGCAACAGTACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp AGTCCCATTGATGGGGTTAATATTCAGCCAACCTGCTaGGTCCTTGTAAACAGAATACCTGATGGTTTGATG +
Preference number: 3 (lower is better)
Translates to: SPIDGVNIQPTC*VLVNRIPDGLM
Trigger: CATCAAACCATCAGGTATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATTAACCCCATCAATGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CCA 72 bp AGCATCTTGCTTTGTCTACTGCAGATTTCCTTCTCATaGGAGCCCAGGCTTTTAAAAGTGGCCTCTACTTTA +
Preference number: 3 (lower is better)
Translates to: SILLCLLQISFS*EPRLLKVASTL
Trigger: TAAAGTAGAGGCCACTTTTAAAAGCCTGGGCTCCCATGAGAAGGAAATCTGCAGTAGACAAAGCAAGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR CCA 72 bp GCACAGCAGGTATATCTGCCTGGAATGATGCTCATTTaGAGAGAACTGGCGGTATTGAAGGTGACTTTTATT +
Preference number: 3 (lower is better)
Translates to: AQQVYLPGMMLI*RELAVLKVTFI
Trigger: AATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACCTGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGTTGCTATGGAAACTaGGGAGTCAAGCTTCAGACG +
Preference number: 3 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMCCYGN*GVKLQT
Trigger: CGTCTGAAGCTTGACTCCCAAGTTTCCATAGCAACA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
3UTR GCA 72 bp TGTGTATACAAGATGGTACCTGTACACCTCTTTGTATaGATGTATGACCTCCATGATGACAGGTGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: CVYKMVPVHLFV*MYDLHDDRCSC
Trigger: ACAACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTACCATCTTGTATACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CCA 72 bp CCTCATAGTAAAAGGTACTGTTGCTTAACAGTAAGTTaGTCTAGCTGCATAGTCACGCTAATGGAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: PHSKRYCCLTVS*SSCIVTLMEAS
Trigger: TGAAGCCTCCATTAGCGTGACTATGCAGCTAGACCAACTTACTGTTAAGCAACAGTACCTTTTACTATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTAAAAATCCCCAGGTCTaGGGACTGTTGACAGATGGC +
Preference number: 3 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIKNPQV*GLLTDG
Trigger: GCCATCTGTCAACAGTCCCAAGACCTGGGGATTTTT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp TTTGAAAGGATCTGTATTCGGGTGAAGATCCTTATCTaGTGCTCCCAAAATGACTACACTGAGGTTTTTGGC +
Preference number: 3 (lower is better)
Translates to: FERICIRVKILI*CSQNDYTEVFG
Trigger: GCCAAAAACCTCAGTGTAGTCATTTTGGGAGCATCAGATAAGGATCTTCACCCGAATACAGATCCTTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR-3UTR CAA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTAGGAATTCAGGATGAGTaGAGCTTAATCCATAGAATA +
Preference number: 3 (lower is better)
Translates to: SQCGITFLEKTLERMISLGIQDE*SLIHRI
Trigger: TATTCTATGGATTAAGCTCAACTCATCCTGAATTCC...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTTGGTCCGTCTCATCTTaGAGTATGCAATTACCTTTA +
Preference number: 3 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIWSVSS*SMQLPL
Trigger: TAAAGGTAATTGCATACTCAAAGATGAGACGGACCA...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp TTGTGGATTTCAAATTTGAAAGGATCTGTATTCGGGTaGAGATCCTTATCTGATGCTCCCAAAATGACTACA +
Preference number: 3 (lower is better)
Translates to: LWISNLKGSVFG*RSLSDAPKMTT
Trigger: TGTAGTCATTTTGGGAGCATCAGATAAGGATCTTCACCCGAATACAGATCCTTTCAAATTTGAAATCCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp CTTTATCAGGAACAGCTTGTTTGTGGATTTCAAATTTaGAAGGATCTGTATTCGGGTGAAGATCCTTATCTG +
Preference number: 3 (lower is better)
Translates to: LYQEQLVCGFQI*KDLYSGEDPYL
Trigger: CAGATAAGGATCTTCACCCGAATACAGATCCTTTCAAATTTGAAATCCACAAACAAGCTGTTCCTGATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR TCA 72 bp ATTAGGAGGAACAACATGACAGAAGTATCTCTGTCCTaGTTAGAACTGTGGGGACAGAGAATATGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: IRRNNMTEVSLS*LELWGQRICLN
Trigger: ATTTAAACATATTCTCTGTCCCCACAGTTCTAATCAGGACAGAGATACTTCTGTCATGTTGTTCCTCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR TCA 72 bp TTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTaGTCTAATGCTATGTATGAGAAACTACAGGTAGAA +
Preference number: 3 (lower is better)
Translates to: FPEANVILSPLF*SNAMYEKLQVE
Trigger: TTCTACCTGTAGTTTCTCATACATAGCATTAGATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR CCA 72 bp TGTCACATCTTAAGATTAAGACCCAGTGTATTTATTTaGGTAAAATGCAATTTGAGCTACTCTATGAGTGTG +
Preference number: 3 (lower is better)
Translates to: CHILRLRPSVFI*VKCNLSYSMSV
Trigger: CACACTCATAGAGTAGCTCAAATTGCATTTTACCCAAATAAATACACTGGGTCTTAATCTTAAGATGTGACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCACCCACAGACAAAGCTaGGTGCCTGGAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSATHRQS*VPGALA
Trigger: AGCCAGTGCTCCAGGCACCCAGCTTTGTCTGTGGGT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCCATCTCCCTACCAATaGGACGGCACGTGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAPSPYQ*DGTWKV
Trigger: GACTTTCCACGTGCCGTCTCATTGGTAGGGAGATGG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGGTAGGCAGCCCTCCATaGACCTGTGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREVGSPP*TCGGVI
Trigger: GATGACCCCACCACAGGTGCATGGAGGGCTGCCTAC...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp ACTGAGGGCAGGCTGAAGCGCAGGGCCCCTGCCGCGTaGCAGTCCACTTTGGAATTCCTGCAGGAGCACACT +
Preference number: 4 (lower is better)
Translates to: TEGRLKRRAPAA*QSTLEFLQEHT
Trigger: AGTGTGCTCCTGCAGGAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCCTGCGCTTCAGCCTGCCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGCCTGAGGTTTGGTTCTaGAGGCCACTTACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREPEVWF*RPLTLG
Trigger: GCCCAAGGTAAGTGGCCTCCAGAACCAAACCTCAGG...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGTGGGTGACCCTTCCATaGCGTGGCCGATGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLWVTLP*RGRCRG
Trigger: GCCCCTACATCGGCCACGTCATGGAAGGGTCACCCA...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGCTTTGTTCAGATTTTaGAGAAGGCTTACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAALFRF*RRLTRA
Trigger: CGCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGGACTGAGGGCAGGCTaGAGCGCAGGGCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHGLRAG*SAGPLP
Trigger: CGGCAGGGGCCCTGCGCTTCAGCCTGCCCTCAGTCC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCTTGTTTGTTCAAGGATaGACGTTCTCCCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSALFVQG*TFSPCL
Trigger: AAGGCAGGGGGAGAACGTTCATCCTTGAACAAACAA...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTACAGAGAGGTCCTCCTaGCTGGTCACCATCATGGGG +
Preference number: 4 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGTERSS*LVTIMG
Trigger: CCCCATGATGGTGACCAGGCAGGAGGACCTCTCTGT...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAGGGCCCCTGCCGCGTTaGAGTCCACTTTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEGPLPR*SPLWNS
Trigger: GGAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCC...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCTCCATGCACCTGTGGTaGGGTCATCCTTATCTTCAA +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSASMHLW*GHPYLQ
Trigger: TTGAAGATAAGGATGACCCCACCACAGGTGCATGGA...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACTGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDCTRLH*AYFPWE
Trigger: CTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCA...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACGCTGAGGAGCAGGACTaGGGGCAGGCTGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHAEEQD*GQAEAQ
Trigger: CTGCGCTTCAGCCTGCCCTCAGTCCTGCTCCTCAGC...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCTGTATTTGTTTCCTTaGGTGAATGGCCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSALYLFP*VNGHSA
Trigger: AGCTGAGTGGCCATTCACTCAAGGAAACAAATACAG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACTTTGAGGAGAGGCTCTaGCTCGCCAGCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDFEERL*LASQPT
Trigger: AGTTGGCTGGCTGGCGAGGCAGAGCCTCTCCTCAAA...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp AGCAGCACCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTGTCCTCCCTTTTGAGGAGAGGCTCTaGCTCGCCAGCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: SSTCPTWSLEVQPHLVLPFEERL*LASQPT
Trigger: AGTTGGCTGGCTGGCGAGGCAGAGCCTCTCCTCAAA...AGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGTGGATTTCAAAGCTCTaGCCGGGGTTTCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREWISKL*PGFPLM
Trigger: CATCAACGGAAACCCCGGGCAGAGCTTTGAAATCCA...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTGAGGGTCTTCCGGTCTaGAGTAGGCACTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCEGLPV*SRHFVW
Trigger: CCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTC...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCATCAAGTTCAAGGTGTaGCATCTCCTGATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAIKFKV*HLLIQQ
Trigger: TTGCTGGATCAGGAGATGCCACACCTTGAACTTGAT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGTGTGGTGCCTGTGGGTaGCCCTTCCATGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMCGACG*PFHDVA
Trigger: GGCCACGTCATGGAAGGGTCACCCACAGGCACCACA...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTTTTTGTCATCGATCATaGTCGTGGCTGTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGFCHRS*SWLWPC
Trigger: GCACGGCCACAGCCACGATCATGATCGATGACAAAA...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTCCCTCCATGCACCTGTaGTGGGGTCATCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGPSMHL*WGHPYL
Trigger: AAGATAAGGATGACCCCACCACAGGTGCATGGAGGG...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGATCACGGCATCAGATaGCAGTGTAAATTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSADHGIR*QCKLVV
Trigger: TACAACCAATTTACACTGCCATCTGATGCCGTGATC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGTCCTCGACTGTGGCTTaGAACTCTTTCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCARESSTVA*NSFLVN
Trigger: ATTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGA...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGGGACTGAGGGCAGGCTaGAGCGCAGGGCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGGLRAG*SAGPLP
Trigger: CGGCAGGGGCCCTGCGCTTCAGCCTGCCCTCAGTCC...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGGTTGACAGATGGCCATaGCTATGCTTAATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREVDRWP*LCLMWS
Trigger: TGACCACATTAAGCATAGTCATGGCCATCTGTCAAC...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCAAAGAAGTGAAGGTGTaGCTATTTGCTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAKEVKV*LFAQWK
Trigger: TTTCCACTGAGCAAATAGTCACACCTTCACTTCTTT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGGGCAGGTTGTAGTTTaGTTTGTTCAGATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSAGQVVV*FVQILK
Trigger: CTTCAAAATCTGAACAAAGCAAACTACAACCTGCCC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGTCATCCGCATCACTGTaGTGCCTGTGGGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLSSASL*CLWVTL
Trigger: AAGGGTCACCCACAGGCACCACAGTGATGCGGATGA...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDGGHYR*LGHLHQ
Trigger: TTGATGCAGATGACCCAGCCACCGATAATGCCCTCC...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp GGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCCTGTGGGTGACCGCTGTTGTCGACAAATaGGGACTCACGGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GHLHQRLSSASLWCLWVTAVVDK*GLTVQH
Trigger: GTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGC...GGTCACCCACAGGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTGGGTGACCCTTCCATaGCGTGGCCGATGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHWVTLP*RGRCRG
Trigger: GCCCCTACATCGGCCACGTCATGGAAGGGTCACCCA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTCTACTGTGGGGTAAATaGACGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGLLWGK*TGHCHS
Trigger: TGAATGACAATGCCCCGTTCATTTACCCCACAGTAG...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGGACTGAGGGCAGGCTaGAGCGCAGGGCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVGLRAG*SAGPLP
Trigger: CGGCAGGGGCCCTGCGCTTCAGCCTGCCCTCAGTCC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAGCTGAGGAGCAGGACTaGGGGCAGGCTGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPAEEQD*GQAEAQ
Trigger: CTGCGCTTCAGCCTGCCCTCAGTCCTGCTCCTCAGC...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGCTACAGAAGGCTAACTaGAAGCACAAGTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCARELQKAN*KHKCKH
Trigger: ATGTTTGCACTTGTGCTTTCAGTTAGCCTTCTGTAG...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAACGCCCGGGAGACGCGTaGCAGTGCCCTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKRPGDA*QCPVKP
Trigger: TGGCTTTACAGGGCACTGTCACGCGTCTCCCGGGCG...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGTTAGGAGGAACAACATaGCAGAAGTATCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCARELGGTT*QKYLCP
Trigger: AGGACAGAGATACTTCTGTCATGTTGTTCCTCCTAA...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCAATTTAAATATATCCTaGAAGGAGCCCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSANLNIS*KEPWMS
Trigger: AGACATCCAGGGCTCCTTGCAGGATATATTTAAATT...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp ATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGCCTGTCACTATCTCCGCATCACTGTGGTaGCTGTGGGTGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IHSLSSEPELGPFWPVTISASLW*LWVTLP
Trigger: TGGAAGGGTCACCCACAGGCACCACAGTGATGCGGA...GATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCTTTCCGCTTTTACATaGTCACAGAATACAAATCAG +
Preference number: 4 (lower is better)
Translates to: LPCRKRGARCARETRDSALSAFT*SQNTNQ
Trigger: CTGATTTGTATTCTGTGAGCATGTAAAAGCGGAAAG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp CAGATGTTAGCAGCAGCACCTGTCCAACGTGGTCTCTaGAAGTGCAGCCGCACCTTGTCCTCCCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: QMLAAAPVQRGL*KCSRTLSSLSC
Trigger: ACATGAGAGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCTGCTAACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAACAGGTGACACAACAGTaGCAATGTCTCCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEQVTQQ*QCLLSQ
Trigger: CTGAGAAAGGAGACATTGTCACTGTTGTGTCACCTG...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDSPAIS*ASMISS
Trigger: TGAACTGATCATCGAGGCTCAAGATATGGCTGGACT...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTTGTAAACAGAATACCTaGTGGTTTGATGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCCKQNT*WFDAAG
Trigger: CCCTGCAGCATCAAACCATCAGGTATTCTGTTTACA...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACGGGCGTGTGTATTGTTaGTCTTGGAGATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDGRVYC*SWRSSR
Trigger: TCTGGAAGATCTCCAAGATCAACAATACACACGCCC...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAAGATTCCCCTGTCCCTaGGTCGGGGGCATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKRFPCP*VGGMCS
Trigger: CGAGCACATGCCCCCGACTCAGGGACAGGGGAATCT...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACGGCTACCAGCCGCCTaGCTGGCTGAGGATGCTCTT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPRLPAA*LAEDAL
Trigger: AAGAGCATCCTCAGCCAGTCAGGCGGCTGGTAGCCG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CATGACGTGGCCGATGTAGGGGCCTTCCCGAAAGATCGGTCGGTTGTCATTCTGTGGATTTCAAAGCTCTaGCCGGGGTTTCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: HDVADVGAFPKDRSVVILWISKL*PGFPLM
Trigger: CATCAACGGAAACCCCGGGCAGAGCTTTGAAATCCA...CAGAATGACAACCGACCGATCTTTCGGGAAGGCCCCTACATCGGCCACGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTAGTTTCCACCCACCTTaGTTAACCTTGCAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCSFHPP*LTLQGR
Trigger: TCTTCCTTGCAAGGTTAAGCAAGGTGGGTGGAAACT...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAGAACTTGGACCTTTCTaGCCTGTCACTATCGACTAC +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEELGPF*PVTIDY
Trigger: GTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTC...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAGACGTCGGGTACGAGTaGGTCTTCATTTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEDVGYE*VFIFHF
Trigger: AAAGTGGAAAATGAAGACCCACTCGTACCCGACGTC...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGGGAGTCGGGGTCCGTaGCATTCACTGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHGSRGP*HSLSAA
Trigger: TGCTGCTGACAGTGAATGCCACGGACCCCGACTCCC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTGTTTCTCCCTGCATGTaGCTGAAGTTTACATTGGAG +
Preference number: 4 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCVSPCM*LKFTLE
Trigger: CTCCAATGTAAACTTCAGCCACATGCAGGGAGAAAC...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp TCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATaGATGGGGTTAATATTCAGCCAACCTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRSSTAVVSTVP*MGLIFSQPAGS
Trigger: GGACCCAGCAGGTTGGCTGAATATTAACCCCATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp ATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGCCTGTCACTATCTTGTCAGGCGTCTGCTaGCGGATATTATACCGCAGG +
Preference number: 4 (lower is better)
Translates to: IHSLSSEPELGPFWPVTILSGVC*RILYRR
Trigger: CCTGCGGTATAATATCCGTCAGCAGACGCCTGACAA...GATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGGAAACTCTTTCTTGGTaGATTTTGGTGAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREETLSW*ILVSDH
Trigger: ATGATCACTCACCAAAATTCACCAAGAAAGAGTTTC...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCCAACGTGGTCTCTCCAACGTGGTCTCTTaGAGTGCAGCCGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: CSPNLLQMLAAAPVQRGLSNVVS*SAAAPC
Trigger: ACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGA...GAGACCACGTTGGACAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACCTGCCTCAGCCTCCTaGGTAGCTGGGGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPPASAS*VAGVSG
Trigger: ACCTGAAACCCCAGCTACTCAGGAGGCTGAGGCAGG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCCTGTGGGTGACCATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GHLHQRLSSASLWCLWVTIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...GGTCACCCACAGGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGGGCCCCTGCCGCGTTaGAGTCCACTTTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKGPLPR*SPLWNS
Trigger: GGAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAACGTTGGTTTGAGGGTTaGTGTGGATTTCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQERWFEG*CGFQSS
Trigger: AGAGCTTTGAAATCCACACCAACCCTCAAACCAACG...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATGTCTGGGTAGAAGACTaGGCCCTCGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNVWVED*ALVDIQ
Trigger: CTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGAC...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp TGGAGGCTGACAGCCCCCTTTTCTGACAGCAGTATGGAGATACCCACTGATGATAGCCTCCCGCGTAGCTaGGACTATAGGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: WRLTAPFSDSSMEIPTDDSLPRS*DYRHMP
Trigger: TGGCATATGCCTATAGTCCCAGCTACGCGGGAGGCT...ATCATCAGTGGGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTCAGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
3UTR CAA 72 bp CTTCAAACGAGGGTCTTCCGGTCTGCAGTAGGCACTTaGTCTGGTTTTGCTCCTGGGTTGAGAGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: LQTRVFRSAVGT*SGFAPGLRVAL
Trigger: CAATGCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGACCGGAAGACCCTCGTTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QQSPSARSGRVATVNCQEIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GCAGCACCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTGTCCTCCCTCATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: AAPVQRGLLKCSRTLSSLMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...GAGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTTCTGATCAATCACAATaGCTTCCAGAGGCACCGGCC +
Preference number: 4 (lower is better)
Translates to: GSPPCTCGGVILIFNCQISDQSQ*LPEAPA
Trigger: GGCCGGTGCCTCTGGAAGTCATTGTGATTGATCAGA...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGTGTAAACAGAATACCTaGTGGTTTGATGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLCKQNT*WFDAAG
Trigger: CCCTGCAGCATCAAACCATCAGGTATTCTGTTTACA...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGCTGAGGAGCAGGACTaGGGGCAGGCTGAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSAEEQD*GQAEAQ
Trigger: CTGCGCTTCAGCCTGCCCTCAGTCCTGCTCCTCAGC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAACTCCTGACCTTAAGTaGTCCACCCGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPTPDLK*STRLCL
Trigger: GAGGCAGAGGCGGGTGGATCACTTAAGGTCAGGAGT...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGCACTATCGACTACCTTaGCAACATCTCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLHYRLP*QHLLGK
Trigger: CTTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTG...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTTCGTGGCTGTGGCCGTaGCTGTTAATCCAACATCCA +
Preference number: 4 (lower is better)
Translates to: GSPPCTCGGVILIFNCQISWLWP*LLIQHP
Trigger: TGGATGTTGGATTAACAGGCACGGCCACAGCCACGA...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCACAGACAAAGCTGGGTaGCTGGAGCACTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPTDKAG*LEHWLA
Trigger: CGCTAGCCAGTGCTCCAGGCACCCAGCTTTGTCTGT...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TTAGCAGCAGCACCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTGTCCTTACCTGGATCCTTTTaGCTTTGTGGTCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LAAAPVQRGLLKCSRTLSLPGSF*LCGQQD
Trigger: GTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAA...GGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACCCTCTCTGTGGACCTaGCTGGCTGGTTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVPSLWT*LAGCGS
Trigger: GCTGCCACAACCAGCCAGGCAGGTCCACAGAGAGGG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAAGAGGGGAGCAAGGTaGGCCCGGGAGACGCGTGAC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSKRGAR*ARETRD
Trigger: GTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTTTTGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: VLPTAVMFLRATKPPSLFVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...GAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CCA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGGAAATGCTACCACTTTaGCCTATAAGAATTGGTTTA +
Preference number: 4 (lower is better)
Translates to: MNVLPLPCRKRGARCAREEMLPL*PIRIGL
Trigger: TAAACCAATTCTTATAGGCCAAAGTGGTAGCATTTC...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGTCACTGAAGGTCACTTaGGTGACATGGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTWVTWCASKDLKITGTGSLKVT*VTWCAS
Trigger: GGAGGCACACCATGTCACCCAAGTGACCTTCAGTGA...CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTCTGATCAATCACAATaGCTTCCAGAGGCACCGGCC +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHSDQSQ*LPEAPA
Trigger: GGCCGGTGCCTCTGGAAGTCATTGTGATTGATCAGA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGTGGTGCCTGTGGGTaGCCCTTCCATGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCGACG*PFHDVA
Trigger: GGCCACGTCATGGAAGGGTCACCCACAGGCACCACA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp GAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGCACACAGGACCACCTaGCTGGGACAGGAGAACGCA +
Preference number: 4 (lower is better)
Translates to: EFSWLIDMEHFLLKSRSAAHRTT*LGQENA
Trigger: TGCGTTCTCCTGTCCCAGTCAGGTGGTCCTGTGTGC...TGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR GCA 90 bp AGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGGGCTCGAGACCTCAATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RATKPPSLFTLKYGLETSIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...TGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568770.5
ENST00000569144.5
CDS-3UTR GCA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTTCCGCATCACTGTGGTaGCTGTGGGTGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGSASLW*LWVTLP
Trigger: TGGAAGGGTCACCCACAGGCACCACAGTGATGCGGA...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGAATATTCAGCCAACCTaGTGGGTCCTTGTAAACAGA +
Preference number: 4 (lower is better)
Translates to: YQQSPSARSGRVATVNCQNIQPT*WVLVNR
Trigger: TCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATT...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATCCACTTTGGAATTCCTaGAGGAGCACACTTGTACCC +
Preference number: 4 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNPLWNS*RSTLVP
Trigger: GGGTACAAGTGTGCTCCTGCAGGAATTCCAAAGTGG...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGAAGCGCAGGGCCCCTaGCGCGTTGCAGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVEAQGP*RVAVHF
Trigger: AAAGTGGACTGCAACGCGGCAGGGGCCCTGCGCTTC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGAAGCGCAGGGCCCCTaGCGCGTTGCAGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKEAQGP*RVAVHF
Trigger: AAAGTGGACTGCAACGCGGCAGGGGCCCTGCGCTTC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: VTWVTWCASKDLKITGTGVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CCA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGGCCATATCTTCCGCATaGGGGGTCCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRAISSA*GVRAWT
Trigger: CGTCCATGCACGGACCCCCCATGCGGAAGATATGGC...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGATTCAGCCAACCTGCTaGGTCCTTGTAAACAGAATA +
Preference number: 4 (lower is better)
Translates to: YQQSPSARSGRVATVNCQIQPTC*VLVNRI
Trigger: TATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAAT...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTGTCCTCCCTCTCATGTAGCAATCTGTTTACCTaGATCCTTTTGCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PVQRGLLKCSRTLSSLSCSNLFT*ILLPLW
Trigger: CCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCT...ACATGAGAGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATTTCCTCAGAATCATCTaGAGAGCTCGTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHFLRII*RARAWV
Trigger: CACCCAGGCACGAGCTCTCCAGATGATTCTGAGGAA...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp TGGTTTTGCTCCTGGGTTGAGAGTGGCATTGTGATGTaGTCGGAAGAACATGAACCCTGGAGCCAGATAGCC +
Preference number: 4 (lower is better)
Translates to: WFCSWVESGIVM*SEEHEPWSQIA
Trigger: GGCTATCTGGCTCCAGGGTTCATGTTCTTCCGACAACATCACAATGCCACTCTCAACCCAGGAGCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGAAGGTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKVTWVTWCASKDLKITGWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...GCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGACCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR TCA 90 bp TTTTGCCCACTGCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: FCPLQLCFSEQLSRHRCSHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...TGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGCAGTGGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR TCA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCCCACTCCCTTTCCAGTaGGCCGGAACTTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCPLPFQ*AGTWTF
Trigger: AAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGG...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGGGTGACCCTTCCATaGCGTGGCCGATGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMWVTLP*RGRCRG
Trigger: GCCCCTACATCGGCCACGTCATGGAAGGGTCACCCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp ATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGCCTGTCACTATCTCCTCGACTGTGGCTTaGAACTCTTTCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: IHSLSSEPELGPFWPVTISSTVA*NSFLVN
Trigger: ATTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGA...GATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGTCCATGGCCCATGCTaGGAACTGGTACTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKVHGPC*ELVLLS
Trigger: AGACAGAAGTACCAGTTCTCAGCATGGGCCATGGAC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAAGCCGCCTGACTGGCTaGGGATGCTCTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKSRLTG*GCSLFV
Trigger: AACAAACAAAGAGCATCCTCAGCCAGTCAGGCGGCT...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGGGGAACCATGCAGTaGAGGTGGGTTGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGGTMQ*RWVVWP
Trigger: GGGCCAAACAACCCACCTGCACTGCATGGTTCCCCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR GCA 90 bp AGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGGGCTCGAGACCTCAGGACGAACAGAGTTTTaGCCACTGCAGTTATGTTTC +
Preference number: 4 (lower is better)
Translates to: RATKPPSLFTLKYGLETSGRTEF*PLQLCF
Trigger: GAAACATAACTGCAGTGGGCAAAACTCTGTTCGTCC...TGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR GCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCTCGTGGCTGTGGCCGTaGCTGTTAATCCAACATCCA +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPSWLWP*LLIQHP
Trigger: TGGATGTTGGATTAACAGGCACGGCCACAGCCACGA...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGTAGGCAGCCCTCCATaGACCTGTGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSVGSPP*TCGGVI
Trigger: GATGACCCCACCACAGGTGCATGGAGGGCTGCCTAC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp GGAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTAGGCAGCCCTCCATaGACCTGTGGTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GIKMGDTTMDLFCLGTGEVGSPP*TCGGVI
Trigger: GATGACCCCACCACAGGTGCATGGAGGGCTGCCTAC...TTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp TATCAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGGGCAGGTTGTAGTTTaGTTTGTTCAGATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YQQSPSARSGRVATVNCQGQVVV*FVQILK
Trigger: CTTCAAAATCTGAACAAAGCAAACTACAACCTGCCC...CTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGGGCCCCTGCCGCGTTaGAGTCCACTTTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVGPLPR*SPLWNS
Trigger: GGAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp ACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCACGTGGTCTCTTGAAGTaGAGCCGCACCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLSAEIQECSPNLLQMLARGLLK*SRTLSS
Trigger: GGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACG...TGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGGTGGTGAAATTGCCTaGTCTGCTCCTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPGGEIA*SAPHLL
Trigger: AAGGAGGTGAGGAGCAGAGCAGGCAATTTCACCACC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGAATGGCCACTCAGCTaGTGTGTTTCTCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKEWPLS*CVSPCM
Trigger: CATGCAGGGAGAAACACAGCAGCTGAGTGGCCATTC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGTTCGGTTCACAAAGTaGAGGAGAGCCTACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHVRFTK*RRAYQL
Trigger: AAGCTGGTAGGCTCTCCTGCACTTTGTGAACCGAAC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCTTGCCCAGGCTGGAGTaGAATGGCTCACTGCAAACT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPLPRLE*NGSLQT
Trigger: AGTTTGCAGTGAGCCATTGCACTCCAGCCTGGGCAA...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GTTAGCAGCAGCACCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTGTCCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: VSSSTCPTWSLEVQPHLVLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...GACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCTGCTAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSPPCTCGGVILIFNCQIGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp GTCCAATGGTTTGACAACAGAAAGCATCCCTTCGTTGGTTTGAGGGTTGGTGTGGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQWFDNRKHPFVGLRVGVEHVGR*LVRRLL
Trigger: CAGCAGACGCCTGACAAGCCATCTCCCAACATGTTC...CACACCAACCCTCAAACCAACGAAGGGATGCTTTCTGTTGTCAAACCATTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACCACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYHHHGV*VEDWAL
Trigger: GAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTG...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACGCCTGGTCACCATCATaGGGTCTGGGTAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: IITDFSYCGVNERGIVIHAWSPS*GLGRRL
Trigger: CAGTCTTCTACCCAGACCCCATGATGGTGACCAGGC...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGGAGTCGGGGTCCGTaGCATTCACTGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGSRGP*HSLSAA
Trigger: TGCTGCTGACAGTGAATGCCACGGACCCCGACTCCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGGGGAGTCGGGGTCCGTaGCATTCACTGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKGSRGP*HSLSAA
Trigger: TGCTGCTGACAGTGAATGCCACGGACCCCGACTCCC...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp GGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCCTGTGGGTGACCTTTTTCCTGTTGCTATaGAAACTTGGGAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GHLHQRLSSASLWCLWVTFFLLL*KLGSQA
Trigger: AGCTTGACTCCCAAGTTTCCATAGCAACAGGAAAAA...GGTCACCCACAGGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp ACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGGCCTCACTGGTGTCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: TLSAEIQECSPNLLQMLAGLTGV*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGACACCAGTGAGGCC...TGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp GAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGGAAGGGCCTGGAACTaGGACTTGCACACAGGACCA +
Preference number: 4 (lower is better)
Translates to: EFSWLIDMEHFLLKSRSAGRAWN*DLHTGP
Trigger: TGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCC...TGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CCA 90 bp ACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCACAGACTCCAAGCCATTaGACAGCCAGTGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLSAEIQECSPNLLQMLAQTPSH*TASGRA
Trigger: GGCCCTTCCACTGGCTGTCCAATGGCTTGGAGTCTG...TGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTAGCCTCCTGAGTAGCTaGGGTTTCAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGSLLSS*GFRCAP
Trigger: TGGTGCACACCTGAAACCCCAGCTACTCAGGAGGCT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp ACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGTTGCTGCTGTTAGTCACTTGGGTGACATaGTGTGCCTCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: TWCASKDLKITGTGLLLLVTWVT*CASKDL
Trigger: CAAGTCCTTGGAGGCACACCATGTCACCCAAGTGAC...TAACAGCAGCAACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCTRLH*AYFPWE
Trigger: CTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CTGGTCCTCAATGAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LVLNEFSWLIDMEHFLLKCTRLH*AYFPWE
Trigger: CTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCA...TTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTCATTGAGGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562601.5
ENST00000568770.5
CDS-3UTR TCA 90 bp TTTGGCATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: FGIITDFSYCGVNERGIVWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...GACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGATGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGGGCTCGAGACCTCAATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RATKPPSLFTLKYGLETSIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...TGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568770.5
ENST00000569144.5
CDS-3UTR TCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGGAATACCTGATGGTTTaGTGCTGCAGGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGEYLMV*CCRESG
Trigger: CCCCGACTCCCTGCAGCATCAAACCATCAGGTATTC...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGAGAGCCTACCAGCTTaGGAGAAAAGGAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKESLPA*EKRSHA
Trigger: AGCATGACTCCTTTTCTCTCAAGCTGGTAGGCTCTC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATTTGAGGAGAGGCTCTaGCTCGCCAGCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSFEERL*LASQPT
Trigger: AGTTGGCTGGCTGGCGAGGCAGAGCCTCTCCTCAAA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp AATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCCAATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NPGVQSKSSADVSSSTCPIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...TGGACAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp GAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EIQECSPNLLQMLAAAPVAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...GACAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGACAATCACGAGTTCTaGCATATCTTCCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKDNHEF*HIFRMG
Trigger: CCCCATGCGGAAGATATGGCAGAACTCGTGATTGTC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCCGCATCACTGTGGTaGCTGTGGGTGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSASLW*LWVTLP
Trigger: TGGAAGGGTCACCCACAGGCACCACAGTGATGCGGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAACAGAGAGGTCCTCCTaGCTGGTCACCATCATGGGG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSTERSS*LVTIMG
Trigger: CCCCATGATGGTGACCAGGCAGGAGGACCTCTCTGT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGGAAGCGCAGGGCCCCTaGCGCGTTGCAGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: CVLLILEIFQTLSGTACLEAQGP*RVAVHF
Trigger: AAAGTGGACTGCAACGCGGCAGGGGCCCTGCGCTTC...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAACAGACAAAGCTGGGTaGCTGGAGCACTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSTDKAG*LEHWLA
Trigger: CGCTAGCCAGTGCTCCAGGCACCCAGCTTTGTCTGT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAAAGGACTTCTTTCTCTaGTCTCCCTCTCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPKDFFL*SPSLWT
Trigger: GGTCCACAGAGAGGGAGAGCAGAGAAAGAAGTCCTT...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACATCTGGAGAGCTCGTaGCTGGGTGCAACTGCACTA +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVHLESS*LGATAL
Trigger: TAGTGCAGTTGCACCCAGGCACGAGCTCTCCAGATG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCACCATGCAGTGCAGGTaGGTTGTTTGGCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVTMQCR*VVWPWD
Trigger: GTCCCAGGGCCAAACAACCCACCTGCACTGCATGGT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCACGCCCAGGCATCTGTaGGCCATTCTCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVTPRHL*AILTGM
Trigger: CATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGCAGCAGCACCTGCATaGTTGAAGCTGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSAAAPA*LKLQVG
Trigger: ACCCACCTGCAGCTTCAACCATGCAGGTGCTGCTGC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGCCATATCTTCCGCATaGGGGGTCCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMAISSA*GVRAWT
Trigger: CGTCCATGCACGGACCCCCCATGCGGAAGATATGGC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATGAACTTGGACCTTTCTaGCCTGTCACTATCGACTAC +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHELGPF*PVTIDY
Trigger: GTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTC...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSHHHGV*VEDWAL
Trigger: GAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAACCCACAGACAAAGCTaGGTGCCTGGAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSTHRQS*VPGALA
Trigger: AGCCAGTGCTCCAGGCACCCAGCTTTGTCTGTGGGT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GATGTTAGCAGCAGCACCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTTATCCTTTTGCCTTTGTaGTCAGCAAGACTGTTACTA +
Preference number: 4 (lower is better)
Translates to: DVSSSTCPTWSLEVQPHLILLPL*SARLLL
Trigger: TAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGAT...AAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCTGCTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp GAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAACAGGACCACCTGACTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: EFSWLIDMEHFLLKSRSATGPPD*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGTCAGGTGGTCCTGT...TGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CCA 90 bp TCTGCAGATGTTAGCAGCAGCACGAAGTTGGCATCATTCCTTCCTTCTGCAAGTGCAGCAGCACGAAGTTaGCATCATTCCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SADVSSSTKLASFLPSASAAARS*HHSFLL
Trigger: CAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGC...ACTTGCAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCTAACATCTGCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGACAAGATGAGTCCATaGCCCATGCTGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKDKMSP*PMLRTG
Trigger: ACCAGTTCTCAGCATGGGCCATGGACTCATCTTGTC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGTCTGGTTTTGCTCCTaGGTTGAGAGTGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPVWFCS*VESGIV
Trigger: CACAATGCCACTCTCAACCCAGGAGCAAAACCAGAC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp CCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATaGACAATAACTCCCACAGCTCCTTCCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: PVVGSSLSSTVK*TITPTAPSSTV
Trigger: CACAGTCGAGGAAGGAGCTGTGGGAGTTATTGTCAATTTGACAGTTGAAGATAAGGATGACCCCACCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 72 bp AAGGTCACTTGGGTGACATGGTGTGCCTCCAAGGACTaGAAAATTACAGGCACTGGGTTGCTGCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: KVTWVTWCASKD*KITGTGLLLLT
Trigger: AGTTAACAGCAGCAACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
3UTR CAA 72 bp TTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTaGTTCCAGAGAAAAATCCCCAGGTCTTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: FKVWHLLIQQQD*FQRKIPRSWDC
Trigger: ACAGTCCCAAGACCTGGGGATTTTTCTCTGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCCAACGTGGTCTCATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSPNLLQMLAAAPVQRGLIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...GAGACCACGTTGGACAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 4 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACCACTCCCTTTCCAGTaGGCCGGAACTTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSPLPFQ*AGTWTF
Trigger: AAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATCCACTCCCTTTCCAGTaGGCCGGAACTTGGACCTTT +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNPLPFQ*AGTWTF
Trigger: AAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGG...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACGAGAGTTTTGCCATTaGCATCAGTGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPREFCH*HQWSPQ
Trigger: TTGTGGAGACCACTGATGTCAATGGCAAAACTCTCG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACAGGTGACACAACAGTaGCAATGTCTCCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPQVTQQ*QCLLSQ
Trigger: CTGAGAAAGGAGACATTGTCACTGTTGTGTCACCTG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGTCCAGCAGCGCAGGTaGCACAACAGTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVVQQRR*HNSDNV
Trigger: GACATTGTCACTGTTGTGTCACCTGCGCTGCTGGAC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CAGATTTTGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTGTCCAGCAGCGCAGGTaGCACAACAGTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: QILKKAYQGVCIVDLGDLVQQRR*HNSDNV
Trigger: GACATTGTCACTGTTGTGTCACCTGCGCTGCTGGAC...AAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGTTTTGTCATCGATCATaGTCGTGGCTGTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRFCHRS*SWLWPC
Trigger: GCACGGCCACAGCCACGATCATGATCGATGACAAAA...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TTTGGCATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATCCCTTCGTTGGTTTaGGGGTTGGTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: FGIITDFSYCGVNERGIVIPSLV*GLVWIS
Trigger: TGAAATCCACACCAACCCTCAAACCAACGAAGGGAT...GACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGATGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCCTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPLHFPL*SAGCGR
Trigger: CCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAG...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGAATACCTGATGGTTTaGTGCTGCAGGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSEYLMV*CCRESG
Trigger: CCCCGACTCCCTGCAGCATCAAACCATCAGGTATTC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGAATACCTGATGGTTTaGTGCTGCAGGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKEYLMV*CCRESG
Trigger: CCCCGACTCCCTGCAGCATCAAACCATCAGGTATTC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCCAACGTCCTGAAAGCTCATCATaGAATAATAGTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QECSPNLLQMLAAAPVQRPESSS*NNSPGS
Trigger: GCTTCCAGGACTATTATTTCATGATGAGCTTTCAGG...ACGTTGGACAGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp GAGCCATCACACCCGACTGCATCTGATCAGTTTAGATCAGTTGTTTCCATATTCGACAGCCCCCTTTTCTaGCAGCAGTATGGAGATACC +
Preference number: 4 (lower is better)
Translates to: EPSHPTASDQFRSVVSIFDSPLF*QQYGDT
Trigger: GGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTC...GAATATGGAAACAACTGATCTAAACTGATCAGATGCAGTCGGGTGTGATGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCACTCTCATTGGAGGCTaGCAGCCCCCTTTTCTGACA +
Preference number: 4 (lower is better)
Translates to: HKSQCGITFLEKTLERMITLIGG*QPPFLT
Trigger: TGTCAGAAAAGGGGGCTGTCAGCCTCCAATGAGAGT...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp AGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGGGCTCGAGACCTCATTCCCTTACAGTCACTaGAGGTCACTTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: RATKPPSLFTLKYGLETSFPYSH*RSLDFM
Trigger: CATAAAATCAAGTGACCTTCAGTGACTGTAAGGGAA...TGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCCCTCAGATCATATCATaGGGTGGACAAGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPPQIIS*GGQDES
Trigger: GGACTCATCTTGTCCACCTCATGATATGATCTGAGG...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAATGGAGGGTGACTTCCTaGTTGCCAGTTAGCATATGT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKWRVTS*LPVSIC
Trigger: ACATATGCTAACTGGCAATCAGGAAGTCACCCTCCA...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAATTTGTTTCCTTGAGTaGATGGCCACTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKICFLE*MATQLL
Trigger: CAGCAGCTGAGTGGCCATTCACTCAAGGAAACAAAT...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: EIQECSPNLLQMLAAARSIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...ACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR GCA 90 bp GAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EIQECSPNLLQMLAAARSAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...ACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGGTGGCTGGGTCATCTaGATCAAAGGCTGTCATCCG +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKGGWVI*IKGCHP
Trigger: CGGATGACAGCCTTTGATGCAGATGACCCAGCCACC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTGTCCTCCCTCTCATGTaGTATATACCTGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AEIQECSPNLLQMLAAAPVLPLM*YIPESS
Trigger: TGAGCTTTCAGGTATATAGCACATGAGAGGGAGGAC...AGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR GCA 90 bp ATTTCATTTCCTTTGCACAGTGTACAACTCTCATTGGAGGCTGACAGCCCCCTTTCACCCAGGTTGGAGTaGAATGGTATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ISFPLHSVQLSLEADSPLSPRLE*NGMISA
Trigger: AGCCGAGATCATACCATTGCACTCCAACCTGGGTGA...AAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACTGTGCAAAGGAAATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR GCA 90 bp ATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCCCTGGAACTGGGACTTaGACACAGGACCACCTGACT +
Preference number: 4 (lower is better)
Translates to: IDMEHFLLKSRSAVQIFCPGTGT*TQDHLT
Trigger: AGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGG...GCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR GCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATGAGCTCGTGCCTGGGTaGAACTGCACTAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNELVPG*NCTKSR
Trigger: CCTGGATTTAGTGCAGTTGCACCCAGGCACGAGCTC...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGTTTTGGGTGACATGGTGTaGCTCCAAGGACTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HLGDMVCLQGLENYRHWVLGDMV*LQGLEN
Trigger: ATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAA...AACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATGGGTTGTTTGGCCCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSWVVWP*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGGCCAAACAACCCA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGCAGGTGGGTTGTTTaGCCCTGGGACAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMCRWVV*PWDRRT
Trigger: CGTTCTCCTGTCCCAGGGCCAAACAACCCACCTGCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGTGGGCCATTCTCACTaGGATGTTCTTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVVGHSH*DVLAGG
Trigger: TCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCAC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp GCAGTTATGTTTCTCAGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: AVMFLRATKPPSLFTLKYVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...ATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCTGAGAAACATAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568770.5
ENST00000569144.5
CDS-3UTR CCA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGTCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 4 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCATCCGCATCACTGTaGTGCCTGTGGGTGACCCTT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSSASL*CLWVTL
Trigger: AAGGGTCACCCACAGGCACCACAGTGATGCGGATGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCGATGTAGAACATGTTaGGAGATGGCTTGTCAGGCG +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGRCRTC*EMACQA
Trigger: CGCCTGACAAGCCATCTCCCAACATGTTCTACATCG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAAGACGTCGGGTACGAGTaGGTCTTCATTTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKDVGYE*VFIFHF
Trigger: AAAGTGGAAAATGAAGACCCACTCGTACCCGACGTC...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGTCTGGGTAGAAGACTaGGCCCTCGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVVWVED*ALVDIQ
Trigger: CTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGAC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGTCTGGGTAGAAGACTaGGCCCTCGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSVWVED*ALVDIQ
Trigger: CTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGAC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGCCTGGTCACCATCATaGGGTCTGGGTAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSAWSPS*GLGRRL
Trigger: CAGTCTTCTACCCAGACCCCATGATGGTGACCAGGC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGCCTGGTCACCATCATaGGGTCTGGGTAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKAWSPS*GLGRRL
Trigger: CAGTCTTCTACCCAGACCCCATGATGGTGACCAGGC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGCTGTTGTCGACAAATaGGGACTCACGGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSAVVDK*GLTVQH
Trigger: GTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTATGGTAGGCCTCACTaGTGTCTGGGACAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: YGTLSAEIQECSPNLLQMYGRPH*CLGQEN
Trigger: GTTCTCCTGTCCCAGACACCAGTGAGGCCTACCATA...CATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTCTCTGTGGACCTGCCTaGCTGGTTGTGGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFLCGPA*LVVAAF
Trigger: GAATGCTGCCACAACCAGCCAGGCAGGTCCACAGAG...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATTGCTCCTCACCTCCTTaGCTCAGGATCACGGCATCA +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNCSSPP*LRITAS
Trigger: TGATGCCGTGATCCTGAGCCAAGGAGGTGAGGAGCA...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTACCAGCCGCCTGACTaGCTGAGGATGCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVYQPPD*LRMLFV
Trigger: AACAAAGAGCATCCTCAGCCAGTCAGGCGGCTGGTA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAGTTTCCTTGAGTGAATaGCCACTCAGCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPVSLSE*PLSCCV
Trigger: AACACAGCAGCTGAGTGGCCATTCACTCAAGGAAAC...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAAGTAGGCACTTTGTCTaGTTTTGCTCCTGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPSRHFV*FCSWVE
Trigger: CTCAACCCAGGAGCAAAACCAGACAAAGTGCCTACT...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGGTTTTTGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCNAFIQEKFAVNRIVGFCTRLH*AYFPWE
Trigger: CTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCA...AAAACCCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp ACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCATGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TLSAEIQECSPNLLQMLAWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...TGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562601.5
ENST00000568770.5
CDS-3UTR TCA 90 bp AAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTTGGCATCATTCCTTCCTTCTTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KSSADVSSSTKLASFLPSWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...AGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCTAACATCTGCAGAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp GGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: GSPPCTCGGVILIFNCQIMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...AATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GTCCTCAATGAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATCCCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: VLNEFSWLIDMEHFLLKSHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...GGATTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTCATTGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATTTTGTCATCGATCATaGTCGTGGCTGTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSFCHRS*SWLWPC
Trigger: GCACGGCCACAGCCACGATCATGATCGATGACAAAA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCAAGGTCCGTGTCACGGAGACGCTCCCTGTGTTCTCATTGATTCTGAAAATTGGATCTGTATTCGGGTaGAGATCCTTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SKVRVTETLPVFSLILKIGSVFG*RSLSDA
Trigger: AGCATCAGATAAGGATCTTCACCCGAATACAGATCC...AATTTTCAGAATCAATGAGAACACAGGGAGCGTCTCCGTGACACGGACCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGGATCTGTATTCGGGTaGAGATCCTTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPGSVFG*RSLSDA
Trigger: AGCATCAGATAAGGATCTTCACCCGAATACAGATCC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCGCTTTGTTCAGATTTTaGAGAAGGCTTACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCALFRF*RRLTRA
Trigger: CGCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGC...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACATGGGTGGTTTCCCTaGATCTGTCACCATGATGGG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSHGWFP*ICHHDG
Trigger: CCCATCATGGTGACAGATTCAGGGAAACCACCCATG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CAGATTTTGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCATGGGTGGTTTCCCTaGATCTGTCACCATGATGGG +
Preference number: 4 (lower is better)
Translates to: QILKKAYQGVCIVDLGDLHGWFP*ICHHDG
Trigger: CCCATCATGGTGACAGATTCAGGGAAACCACCCATG...AAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATTGGCAGCATTCAGACTaGACGGGACAGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNWQHSD*TGQWRS
Trigger: ACTTCTCCACTGTCCCGTTCAGTCTGAATGCTGCCA...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATCAGTTGTACATTTACTaGGGAGGGAGAGATTCTCTA +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHQLYIY*GGRDSL
Trigger: TAGAGAATCTCTCCCTCCTCAGTAAATGTACAACTG...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGAAGTATCTCTGTCCTaGTTAGAACTGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGEVSLS*LELWGQ
Trigger: CTGTCCCCACAGTTCTAATCAGGACAGAGATACTTC...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATACAGTGCAAACCCTTTaGGACCCCACCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNTVQTL*DPTPLS
Trigger: AGAAAGTGGGGTGGGGTCTCAAAGGGTTTGCACTGT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCTGTGACTTACCCTGTTaGCTCATGTTTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPCDLPC*LMFKAA
Trigger: AGCTGCCTTAAACATGAGTCAACAGGGTAAGTCACA...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTTTCATAGCTTCAGAGTaGAAACCTCCCTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGFIASE*KPPSSY
Trigger: GTAGGACGAGGGAGGTTTTCACTCTGAAGCTATGAA...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGTGGCTGGGTCATCTaGATCAAAGGCTGTCATCCG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGGWVI*IKGCHP
Trigger: CGGATGACAGCCTTTGATGCAGATGACCCAGCCACC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCGTGGCTGTGGCCGTaGCTGTTAATCCAACATCCA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSWLWP*LLIQHP
Trigger: TGGATGTTGGATTAACAGGCACGGCCACAGCCACGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCGGGACACATACAAATaGAGGTTGGTGCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGRDTYK*RLVPMK
Trigger: TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCATGCTGTGTTTCTCCCTaGATGTGGCTGAAGTTTACA +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPCCVSP*MWLKFT
Trigger: TGTAAACTTCAGCCACATGCAGGGAGAAACACAGCA...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTGCAATGGCTCACTaGAAACTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSSAMAH*KLCLLG
Trigger: ACCCAGGAGGCAGAGTTTGCAGTGAGCCATTGCACT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCTGGGATGTTCTTGCTaGGGGAACCATGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMLGCSC*GNHAVQ
Trigger: CTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CCA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGGGCATTATCGGTGGCTaGGTCATCTGCATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKGIIGG*VICIKG
Trigger: GCCTTTGATGCAGATGACCCAGCCACCGATAATGCC...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGGCATTATCGGTGGCTaGGTCATCTGCATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVGIIGG*VICIKG
Trigger: GCCTTTGATGCAGATGACCCAGCCACCGATAATGCC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGGHYR*LGHLHQ
Trigger: TTGATGCAGATGACCCAGCCACCGATAATGCCCTCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKEHVGR*LVRRLL
Trigger: CAGCAGACGCCTGACAAGCCATCTCCCAACATGTTC...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AGTGACAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTGGGAGATGGCTTCGATGTAGAACATGTTaGGAGATGGCTTGTCAGGCG +
Preference number: 4 (lower is better)
Translates to: SDNVSFLRIDVEHVGRWLRCRTC*EMACQA
Trigger: CGCCTGACAAGCCATCTCCCAACATGTTCTACATCG...AAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCTCCATGCACCTGTGGTaGGGTCATCCTTATCTTCAA +
Preference number: 4 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCSMHLW*GHPYLQ
Trigger: TTGAAGATAAGGATGACCCCACCACAGGTGCATGGA...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACCCTCCATGCACCTGTaGTGGGGTCATCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSPSMHL*WGHPYL
Trigger: AAGATAAGGATGACCCCACCACAGGTGCATGGAGGG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCCCTCCATGCACCTGTaGTGGGGTCATCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVPSMHL*WGHPYL
Trigger: AAGATAAGGATGACCCCACCACAGGTGCATGGAGGG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTAAAGCATCCCTTCGTTaGTTTGAGGGTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGKASLR*FEGWCG
Trigger: TCCACACCAACCCTCAAACCAACGAAGGGATGCTTT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGCTGTTGTCGACAAATaGGGACTCACGGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMAVVDK*GLTVQH
Trigger: GTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CCCTTACAGTCACTGAAGGTCAAGTTTAGAATTGACTGGTCCTCAATGAATTCAAGCACCTGTCCAACGTaGTCTCTTGAAGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLQSLKVKFRIDWSSMNSSTCPT*SLEVQP
Trigger: CGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCT...TGAATTCATTGAGGACCAGTCAATTCTAAACTTGACCTTCAGTGACTGTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp TGGAGGCTGACAGCCCCCTTTTCTGACAGCAGTATGGAGATACCCACTGATGATTTTCTGACAGCAGTATaGAGATACCCACTGATGATA +
Preference number: 4 (lower is better)
Translates to: WRLTAPFSDSSMEIPTDDFLTAV*RYPLMI
Trigger: TATCATCAGTGGGTATCTCCATACTGCTGTCAGAAA...ATCATCAGTGGGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTCAGCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CCA 90 bp ACTCTATTAACCTCTAAGTTGGCCAGGCCCTCATTCAAGAATTTCCACTTTGGGGTGTACAACTCTCATTaGAGGCTGACAGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TLLTSKLARPSFKNFHFGVYNSH*RLTAPF
Trigger: AAAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACAC...CCCAAAGTGGAAATTCTTGAATGAGGGCCTGGCCAACTTAGAGGTTAATAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CCA 90 bp CTTGTCGTTTCCCTTACAGTCACTGAAGGTCACTTGATTTTATGCTTTTCCATTGCCAGTGGAAGGGCCTaGAACTGGGACTTGCACACA +
Preference number: 4 (lower is better)
Translates to: LVVSLTVTEGHLILCFSIASGRA*NWDLHT
Trigger: TGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACTGGC...AATGGAAAAGCATAAAATCAAGTGACCTTCAGTGACTGTAAGGGAAACGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACCTTACCCTAGTTCGTaGCGAGCTCTAATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPPYPSS*RALIKS
Trigger: GCTTTTTATTAGAGCTCGCCACGAACTAGGGTAAGG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCATTCTCTCCCCTCAGTTaGTTTGGTAGTGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPFSPLS*FGSEWV
Trigger: TACCCATTCACTACCAAACCAACTGAGGGGAGAGAA...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CATCATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAATGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HHSVEKMDLKYRVLVGSKCTRLH*AYFPWE
Trigger: CTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCA...TTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: SETVSNSAVRAQRSDICHMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACCTTTCCCTTACAGTCACTaGAGGTCAAGTTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: AEIQECSPNLLQMLAAAPFPYSH*RSSLEL
Trigger: CAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAA...AGGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGATCAATCACAATaGCTTCCAGAGGCACCGGCC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSDQSQ*LPEAPA
Trigger: GGCCGGTGCCTCTGGAAGTCATTGTGATTGATCAGA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATTGACAATGGTCGGTTGTCATTCTaGTCAATCACAATGACTTCC +
Preference number: 4 (lower is better)
Translates to: PPCTCGGVILIFNCQIDNGRLSF*SITMTS
Trigger: GGAAGTCATTGTGATTGATCAGAATGACAACCGACC...ATTGTCAATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTTGTCAGGCGTCTGCTaGCGGATATTATACCGCAGG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMLSGVC*RILYRR
Trigger: CCTGCGGTATAATATCCGTCAGCAGACGCCTGACAA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCATATCTTGAGCCTCGATaGTCAGTTCATACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPYLEPR*SVHTWD
Trigger: ATCCCAAGTATGAACTGATCATCGAGGCTCAAGATA...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVSPAIS*ASMISS
Trigger: TGAACTGATCATCGAGGCTCAAGATATGGCTGGACT...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTATCCCTTCGTTGGTTTaGGGGTTGGTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVIPSLV*GLVWIS
Trigger: TGAAATCCACACCAACCCTCAAACCAACGAAGGGAT...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACATAGTCCAATGGTTTaGCAACAGAAAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPHSPMV*QQKASL
Trigger: AAGGGATGCTTTCTGTTGTCAAACCATTGGACTATG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACTACTGTGGGGTAAATaGACGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVLLWGK*TGHCHS
Trigger: TGAATGACAATGCCCCGTTCATTTACCCCACAGTAG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCATGGGTGGTTTCCCTaGATCTGTCACCATGATGGG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMHGWFP*ICHHDG
Trigger: CCCATCATGGTGACAGATTCAGGGAAACCACCCATG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTGTGCTCGTGGAGAATaGCCCTATCAAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVCARGE*PYQVQG
Trigger: ACCTTGAACTTGATAGGGTCATTCTCCACGAGCACA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGCCATTCAATTTTTCTaGGCCTCAGCCTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPAIQFF*ASAFFI
Trigger: GATAAAGAAGGCTGAGGCTCAGAAAAATTGAATGGC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGTTTCCTGTTGGTGTaGCTTACCCTGTTGACTCAT +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGFLLV*LTLLTH
Trigger: ATGAGTCAACAGGGTAAGTCACACCAACAGGAAACC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTTCATCAGGACAGTGTTaGCATGTGCATGACAACACA +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGSSGQC*HVHDNT
Trigger: TGTGTTGTCATGCACATGTCAACACTGTCCTGATGA...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTTGAGGAGAGGCTCTaGCTCGCCAGCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: GFKSAVMPSFKRSSLLIGFEERL*LASQPT
Trigger: AGTTGGCTGGCTGGCGAGGCAGAGCCTCTCCTCAAA...TCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTTGCTGGGGGAACCATaGAGTGCAGGTGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMLLGEP*SAGGLF
Trigger: AAACAACCCACCTGCACTGCATGGTTCCCCCAGCAA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCACTGGGATGTTCTTaGTGGGGGAACCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSLGCS*WGNHAV
Trigger: CACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGTTAGCAGCAGCACCTaGATGGTTGAAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMVSSST*MVEAAG
Trigger: ACCTGCAGCTTCAACCATGCAGGTGCTGCTGCTAAC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR GCA 90 bp ACTCTATTAACCTCTAAGTTGGCCAGGCCCTCATTCAAGAATTTCCACTTTGGGGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLLTSKLARPSFKNFHFGAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...CCCAAAGTGGAAATTCTTGAATGAGGGCCTGGCCAACTTAGAGGTTAATAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR GCA 90 bp ATTACAGGCACTGGGTTGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCAGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ITGTGLLLLTKHLALSTAAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...TGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGGATTTCAAAGCTCTaGCCGGGGTTTCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVWISKL*PGFPLM
Trigger: CATCAACGGAAACCCCGGGCAGAGCTTTGAAATCCA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTACAGAGAGGTCCTCCTaGCTGGTCACCATCATGGGG +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEITERSS*LVTIMG
Trigger: CCCCATGATGGTGACCAGGCAGGAGGACCTCTCTGT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACCACTTTGGAATTCCTaGAGGAGCACACTTGTACCC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSPLWNS*RSTLVP
Trigger: GGGTACAAGTGTGCTCCTGCAGGAATTCCAAAGTGG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACTTGTGGAGTGTGAATaGACAGGCTTAGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVLVECE*TGLDSP
Trigger: AGGGGAATCTAAGCCTGTGCATTCACACTCCACAAG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTGCCTGGGTGCAACTaGACTAAATCCAGGATCAAA +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVVPGCN*TKSRIK
Trigger: TTTGATCCTGGATTTAGTGCAGTTGCACCCAGGCAC...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAACACTTTGTCTGGTTTTaGTCCTGGGTTGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKHFVWF*SWVESG
Trigger: GCCACTCTCAACCCAGGAGCAAAACCAGACAAAGTG...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CTGAAGGTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: LKVTWVTWCASKDLKITGLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...GCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGACCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTGCCATATCTTCCGCATaGGGGGTCCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIAISSA*GVRAWT
Trigger: CGTCCATGCACGGACCCCCCATGCGGAAGATATGGC...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp CATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGCCATATCTTCCGCATaGGGGGTCCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: HGFKSAVMPSFKRSSLLIAISSA*GVRAWT
Trigger: CGTCCATGCACGGACCCCCCATGCGGAAGATATGGC...TATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGCATTATCGGTGGCTaGGTCATCTGCATCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGIIGG*VICIKG
Trigger: GCCTTTGATGCAGATGACCCAGCCACCGATAATGCC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGAGGGCATTATCGGTaGCTGGGTCATCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGGHYR*LGHLHQ
Trigger: TTGATGCAGATGACCCAGCCACCGATAATGCCCTCC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGAACATGTTGGGAGATaGCTTGTCAGGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMEHVGR*LVRRLL
Trigger: CAGCAGACGCCTGACAAGCCATCTCCCAACATGTTC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCGATGTAGAACATGTTaGGAGATGGCTTGTCAGGCG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVRCRTC*EMACQA
Trigger: CGCCTGACAAGCCATCTCCCAACATGTTCTACATCG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp TGCTCCCAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACAAAGCATCCCTTCGTTaGTTTGAGGGTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: CSQNDYTEVFGIITDFSYKASLR*FEGWCG
Trigger: TCCACACCAACCCTCAAACCAACGAAGGGATGCTTT...GTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTGGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTCACCATCATGGGGTCTaGGTAGAAGACTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIHHHGV*VEDWAL
Trigger: GAGGGCCCAGTCTTCTACCCAGACCCCATGATGGTG...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGGTTTTGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: CCNAFIQEKFAVNRIVGFVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...AAAACCCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAATGCTTAACAGTAAGTTaGTCTAGCTGCATAGTCACG +
Preference number: 4 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKCLTVS*SSCIVT
Trigger: CGTGACTATGCAGCTAGACCAACTTACTGTTAAGCA...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp TCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTaGGCATCATTCCTTCCTTCTGCAAGTGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: SKSSADVSSSTK*ASFLPSASGKT
Trigger: AGTTTTCCCACTTGCAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp GAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: EIQECSPNLLQMLAAARSMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...ACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp AAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: KSAVMPSFKRSSLLIGLWHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...CCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACGAGAGTTTTGCCATTaGCATCAGTGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSREFCH*HQWSPQ
Trigger: TTGTGGAGACCACTGATGTCAATGGCAAAACTCTCG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSLHFPL*SAGCGR
Trigger: CCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CAGATTTTGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCTTCATTTTCCACTTTaGTCAGCAGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QILKKAYQGVCIVDLGDLLHFPL*SAGCGR
Trigger: CCTTCCACACCCTGCTGATCAAAGTGGAAAATGAAG...AAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCTACTGTGGGGTAAATaGACGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVLLWGK*TGHCHS
Trigger: TGAATGACAATGCCCCGTTCATTTACCCCACAGTAG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACGTGAAGATCCTTATCTaGTGCTCCCAAAATGACTAC +
Preference number: 4 (lower is better)
Translates to: IITDFSYCGVNERGIVIHVKILI*CSQNDY
Trigger: GTAGTCATTTTGGGAGCATCAGATAAGGATCTTCAC...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGGCGTGTGTATTGTTaGTCTTGGAGATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGRVYC*SWRSSR
Trigger: TCTGGAAGATCTCCAAGATCAACAATACACACGCCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGCTTTGTTCAGATTTTaGAGAAGGCTTACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSALFRF*RRLTRA
Trigger: CGCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCTGGAATCACCTTCCTTaGAAAGACCTTGGAGCGTAT +
Preference number: 4 (lower is better)
Translates to: HKSQCGITFLEKTLERMIWNHLP*KDLGAY
Trigger: ATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCA...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCAGGTCCGTCTCATCTTTaGGTATGCAATTACCTTTAT +
Preference number: 4 (lower is better)
Translates to: PYQVQGVASPDPATGFVPGPSHL*VCNYLY
Trigger: ATAAAGGTAATTGCATACTCAAAGATGAGACGGACC...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGTATATGCTTTCATGTaGACACGGTCACAACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVVYAFM*TRSQLQ
Trigger: CTGCAGTTGTGACCGTGTTCACATGAAAGCATATAC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AAAATTACAGGCACTGGGTTGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGTGCCTCCAAGGACTTaGAAATTACAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: KITGTGLLLLTKHLALSTVPPRT*KLQALG
Trigger: ACCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCAC...AGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR GCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTTTGAGGAGAGGCTCTaGCTCGCCAGCCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIFEERL*LASQPT
Trigger: AGTTGGCTGGCTGGCGAGGCAGAGCCTCTCCTCAAA...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGACAATCACGAGTTCTaGCATATCTTCCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMDNHEF*HIFRMG
Trigger: CCCCATGCGGAAGATATGGCAGAACTCGTGATTGTC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCCACTTTGGAATTCCTaGAGGAGCACACTTGTACCC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMPLWNS*RSTLVP
Trigger: GGGTACAAGTGTGCTCCTGCAGGAATTCCAAAGTGG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGGCATATGCCACCATaGCCAGCTAAGTTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: HKSQCGITFLEKTLERMIRHMPP*PAKFCN
Trigger: GTTACAAAACTTAGCTGGGCATGGTGGCATATGCCT...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR GCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGTACACCTCTTTGTATaGATGTATGACCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPVHLFV*MYDLHD
Trigger: ATCATGGAGGTCATACATGCATACAAAGAGGTGTAC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTAAACCCTCAGACCTGTaGTCAGTAATTGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVKPSDL*SVIGKS
Trigger: GCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTT...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGTAAGTTGGTCTAGCTaGATAGTCACGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVVSWSS*IVTLME
Trigger: CTCCATTAGCGTGACTATGCAGCTAGACCAACTTAC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGAACTTGGACCTTTCTaGCCTGTCACTATCGACTAC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSELGPF*PVTIDY
Trigger: GTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCCATGCACCTGTGGTaGGGTCATCCTTATCTTCAA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSMHLW*GHPYLQ
Trigger: TTGAAGATAAGGATGACCCCACCACAGGTGCATGGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCAAAGCATCCCTTCGTTaGTTTGAGGGTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVKASLR*FEGWCG
Trigger: TCCACACCAACCCTCAAACCAACGAAGGGATGCTTT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGACGTCGGGTACGAGTaGGTCTTCATTTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSDVGYE*VFIFHF
Trigger: AAAGTGGAAAATGAAGACCCACTCGTACCCGACGTC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCGGATTTTGTACAGTGTaGGCACATAATAAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPGFCTV*AHNKQL
Trigger: CAACTGCTTATTATGTGCCCACACTGTACAAAATCC...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp TTGGCTCAGGATCACGGCATCAGATGGCAGTGTAAATaGGTTGTAGTCCTCGAACTCAATAAAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LAQDHGIRWQCK*VVVLELNKEKG
Trigger: TCCTTTCTCTTTATTGAGTTCGAGGACTACAACCAATTTACACTGCCATCTGATGCCGTGATCCTGAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KSAVMPSFKRSSLLIGLWWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...CCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HKSQCGITFLEKTLERMIIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTTTGTCAGGCGTCTGCTaGCGGATATTATACCGCAGG +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEILSGVC*RILYRR
Trigger: CCTGCGGTATAATATCCGTCAGCAGACGCCTGACAA...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCAGGTGACACAACAGTaGCAATGTCTCCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMQVTQQ*QCLLSQ
Trigger: CTGAGAAAGGAGACATTGTCACTGTTGTGTCACCTG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGAGTCCAGCCATATCTTaGGCCTCGATGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSPAIS*ASMISS
Trigger: TGAACTGATCATCGAGGCTCAAGATATGGCTGGACT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCCTCGACTGTGGCTTaGAACTCTTTCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSSTVA*NSFLVN
Trigger: ATTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGATCCCTTCGTTGGTTTaGGGGTTGGTGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMIPSLV*GLVWIS
Trigger: TGAAATCCACACCAACCCTCAAACCAACGAAGGGAT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGTAAACAGAATACCTaGTGGTTTGATGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCKQNT*WFDAAG
Trigger: CCCTGCAGCATCAAACCATCAGGTATTCTGTTTACA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGTGAAGATCCTTATCTaGTGCTCCCAAAATGACTAC +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVVKILI*CSQNDY
Trigger: GTAGTCATTTTGGGAGCATCAGATAAGGATCTTCAC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGATCTGTATTCGGGTaGAGATCCTTATCTGATGCT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGSVFG*RSLSDA
Trigger: AGCATCAGATAAGGATCTTCACCCGAATACAGATCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp ATTTCATTTCCTTTGCACAGTGTACAACTCTCATTGGAGGCTGACAGCCCCCTTGGAAATACCACATCCTaGGACACAGTCATAAACATT +
Preference number: 4 (lower is better)
Translates to: ISFPLHSVQLSLEADSPLGNTTS*DTVINI
Trigger: AATGTTTATGACTGTGTCTCAGGATGTGGTATTTCC...AAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACTGTGCAAAGGAAATGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATAATGTGGTCATCAACTaGGAATGGTCCGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNNVVIN*EWSVSS
Trigger: AGATGAGACGGACCATTCTCAGTTGATGACCACATT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATTTGAGAGTGGCATTGTaGTGTTGTCGGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNLRVAL*CCRKNM
Trigger: CATGTTCTTCCGACAACATCACAATGCCACTCTCAA...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGGACGAACAGAGTTTTaGCCACTGCAGTTATGTTTC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVGRTEF*PLQLCF
Trigger: GAAACATAACTGCAGTGGGCAAAACTCTGTTCGTCC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp TGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGGTTTTGACAATCACGAGTTCTaGCATATCTTCCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: CCNAFIQEKFAVNRIVGFDNHEF*HIFRMG
Trigger: CCCCATGCGGAAGATATGGCAGAACTCGTGATTGTC...AAAACCCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACACTATCGACTACCTTaGCAACATCTCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSHYRLP*QHLLGK
Trigger: CTTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCACTATCGACTACCTTaGCAACATCTCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVHYRLP*QHLLGK
Trigger: CTTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAAATATTCAGCCAACCTaGTGGGTCCTTGTAAACAGA +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVNIQPT*WVLVNR
Trigger: TCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTAGGTAGAACAGCAATCTaGGAGAAGGCAATGATTTTG +
Preference number: 4 (lower is better)
Translates to: SQCGITFLEKTLERMISLGRTAI*EKAMIL
Trigger: CAAAATCATTGCCTTCTCGCAGATTGCTGTTCTACC...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR GCA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGCTCCATGATGACAGGTaGAGTTGTACATTTACTGAG +
Preference number: 4 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRLHDDR*SCTFTE
Trigger: CTCAGTAAATGTACAACTGCACCTGTCATCATGGAG...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAATATAGCAAAGCACAGTaGAAACCCTTTGAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKYSKAQ*KPFETP
Trigger: TGGGGTCTCAAAGGGTTTGCACTGTGCTTTGCTATA...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp ATTACAGGCACTGGGTTGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCATCTTGCTTTGTCTACTaGAGATTTCCTTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: ITGTGLLLLTKHLALSTASCFVY*RFPSHG
Trigger: CCCATGAGAAGGAAATCTGCAGTAGACAAAGCAAGA...TGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CCA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGCTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKLANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCGTTGGTTTGAGGGTTaGTGTGGATTTCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVRWFEG*CGFQSS
Trigger: AGAGCTTTGAAATCCACACCAACCCTCAAACCAACG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATGTTAGCAGCAGCACCTaGGACAGGAGAACGCACAGA +
Preference number: 4 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDVSSST*DRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGTGCTGCTGCTAAC...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATACGACGGACCCCAAATaGTCTGTCAAAAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNTTDPK*SVKNVN
Trigger: GTTCACATTTTTGACAGACCATTTGGGGTCCGTCGT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTGGGGGCATGTGCTCGTaGAGAATGACCCTATCAAGT +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIGGMCS*RMTLSS
Trigger: ACTTGATAGGGTCATTCTCCACGAGCACATGCCCCC...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp CATGATGGGCAGGTTGTAGTTTGCTTTGTTCAGATTTaGAAGAAGGCTTACCAGGGCGTGTGTATTGTTGAT +
Preference number: 4 (lower is better)
Translates to: HDGQVVVCFVQI*KKAYQGVCIVD
Trigger: ATCAACAATACACACGCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGCAAACTACAACCTGCCCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp GAGCCATCACACCCGACTGCATCTGATCAGTTTAGATCAGTTGTTTCCATATTCATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: EPSHPTASDQFRSVVSIFMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...GAATATGGAAACAACTGATCTAAACTGATCAGATGCAGTCGGGTGTGATGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTCATCGCTGTTCACCTTaGAGTATGGGCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIHRCSP*SMGSRP
Trigger: AGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATG...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGCGAGAGTTTTGCCATTaGCATCAGTGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: CVLLILEIFQTLSGTACLREFCH*HQWSPQ
Trigger: TTGTGGAGACCACTGATGTCAATGGCAAAACTCTCG...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGTCGGTTGTCATTCTaGTCAATCACAATGACTTCC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGRLSF*SITMTS
Trigger: GGAAGTCATTGTGATTGATCAGAATGACAACCGACC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTGGTCGGTTGTCATTCTaGTCAATCACAATGACTTCC +
Preference number: 4 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFGRLSF*SITMTS
Trigger: GGAAGTCATTGTGATTGATCAGAATGACAACCGACC...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATATCTTGAGCCTCGATaGTCAGTTCATACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSYLEPR*SVHTWD
Trigger: ATCCCAAGTATGAACTGATCATCGAGGCTCAAGATA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp ATCATCACAGACTTCAGCTACTGTGGGGTAAATGAACGGGGCATTGTCATTCACCTTGGTGAATTTTGGTaGGTGATCATTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: IITDFSYCGVNERGIVIHLGEFW*VIIFVI
Trigger: GATGACAAAAATGATCACTCACCAAAATTCACCAAG...GTGAATGACAATGCCCCGTTCATTTACCCCACAGTAGCTGAAGTCTGTGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCTTGGTGAATTTTGGTaGGTGATCATTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGLGEFW*VIIFVI
Trigger: GATGACAAAAATGATCACTCACCAAAATTCACCAAG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACATAGTCCAATGGTTTaGCAACAGAAAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSHSPMV*QQKASL
Trigger: AAGGGATGCTTTCTGTTGTCAAACCATTGGACTATG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGTGAAGATCCTTATCTaGTGCTCCCAAAATGACTAC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSVKILI*CSQNDY
Trigger: GTAGTCATTTTGGGAGCATCAGATAAGGATCTTCAC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCTGTGGATTTCAAATTTaGAAGGATCTGTATTCGGGT +
Preference number: 4 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCCGFQI*KDLYSG
Trigger: ACCCGAATACAGATCCTTTCAAATTTGAAATCCACA...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCAAAAACCGGAACAATTaGGGCCTAGTTGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVKNRNN*GLVVKF
Trigger: GAACTTCACAACTAGGCCTCAATTGTTCCGGTTTTT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTACTCAAGAGCCTACAATaGAATAGCTATTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: SQCGITFLEKTLERMISLLKSLQ*NSYLST
Trigger: GGTAGACAAATAGCTATTTCATTGTAGGCTCTTGAG...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATAGAGATTCTCTACCATaGTCTGTGTCCCCATTAGAA +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNRDSLP*SVSPLE
Trigger: TTCTAATGGGGACACAGATCATGGTAGAGAATCTCT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAAGACCCAACATCAGTaGCATTGGACACAAGATAGA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSKTQHQ*HWTQDR
Trigger: TCTATCTTGTGTCCAATGTCACTGATGTTGGGTCTT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTAGGTCTTGGGACTGTTaGCAGATGGCCATGACTATG +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIRSWDC*QMAMTM
Trigger: CATAGTCATGGCCATCTGTCAACAGTCCCAAGACCT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATTATATCTGCCTGGAATaGTGCTCATTTGGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNYICLE*CSFGEN
Trigger: GTTCTCTCCAAATGAGCATCATTCCAGGCAGATATA...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GTAATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VMHGFKSAVMPSFKRSSLAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...CAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAATATTCAGCCAACCTaGTGGGTCCTTGTAAACAGA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSNIQPT*WVLVNR
Trigger: TCTGTTTACAAGGACCCAGCAGGTTGGCTGAATATT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTACTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: SQCGITFLEKTLERMISLLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CCA 90 bp CATCATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: HHSVEKMDLKYRVLVGSKVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...TTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp GTAATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VMHGFKSAVMPSFKRSSLGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...CAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMLANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCGTTGGTTTGAGGGTTaGTGTGGATTTCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMRWFEG*CGFQSS
Trigger: AGAGCTTTGAAATCCACACCAACCCTCAAACCAACG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCATTCAGCCAACCTGCTaGGTCCTTGTAAACAGAATA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVIQPTC*VLVNRI
Trigger: TATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAAT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAATTCAGCCAACCTGCTaGGTCCTTGTAAACAGAATA +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSIQPTC*VLVNRI
Trigger: TATTCTGTTTACAAGGACCCAGCAGGTTGGCTGAAT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp ATTTCATTTCCTTTGCACAGTGTACAACTCTCATTGGAGGCTGACAGCCCCCTTCAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: ISFPLHSVQLSLEADSPLQFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTG...AAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACTGTGCAAAGGAAATGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGAATCAGTACGACTGTaGATTCGGGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVESVRL*IRDTYK
Trigger: TTTGTATGTGTCCCGAATCCACAGTCGTACTGATTC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGCGAAGTTAATCTTCTaGTTCGGTTCACAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVAKLIF*FGSQSA
Trigger: TGCACTTTGTGAACCGAACCAGAAGATTAACTTCGC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGAATGATGCTCATTTaGAGAGAACTGGCGGTATTG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGMMLI*RELAVL
Trigger: CAATACCGCCAGTTCTCTCCAAATGAGCATCATTCC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGGAGTGTGATGGTAGATaGTTGTTCCATTTATCAGAC +
Preference number: 4 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRECDGR*LFHLSD
Trigger: GTCTGATAAATGGAACAACCATCTACCATCACACTC...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGAGGCCACTTACCTTaGGCAAGCCATTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGGHLP*ASHSIF
Trigger: AAAAATTGAATGGCTTGCCCAAGGTAAGTGGCCTCC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATTGGAACACTTTCTGCTaGAATCCAGGAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDWNTFC*NPGVQS
Trigger: GGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCA...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR TCA 90 bp ACTGGGTTGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCAGATTTCCTTATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: TGLLLLTKHLALSTADFLMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...AAGGAAATCTGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATTCCCTTACAGTCACTaGAGGTCAAGTTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSFPYSH*RSSLEL
Trigger: CAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGAAACTCTTTCTTGGTaGATTTTGGTGAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: RLTRACVLLILEIFQTLSETLSW*ILVSDH
Trigger: ATGATCACTCACCAAAATTCACCAAGAAAGAGTTTC...TGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTGTGGATTTCAAATTTaGAAGGATCTGTATTCGGGT +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVCGFQI*KDLYSG
Trigger: ACCCGAATACAGATCCTTTCAAATTTGAAATCCACA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTGTTTTGCTCCTGGGTTaGGAGTGGCATTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIVLLLG*EWHCDV
Trigger: AACATCACAATGCCACTCTCAACCCAGGAGCAAAAC...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAATGCCCGGCTACTTTTaGTTAACTGAGATGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVMPGYF*LTEMLN
Trigger: ATTTAACATCTCAGTTAATCAAAAGTAGCCGGGCAT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CATCATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: HHSVEKMDLKYRVLVGSKIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...TTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp GGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGAATTCATGCACGCGGCTaGACTGAGCATATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GFKSAVMPSFKRSSLLIGIHARG*TEHIFR
Trigger: ACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAAT...TCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGGCTGAAATCCAGGAGTaGAGTCCAAATCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMAEIQE*SPNLLQ
Trigger: CTGCAGAAGATTTGGACTGCACTCCTGGATTTCAGC...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCGACAATCACGAGTTCTaGCATATCTTCCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSDNHEF*HIFRMG
Trigger: CCCCATGCGGAAGATATGGCAGAACTCGTGATTGTC...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGAGTAGTCATTGTTCCTaGTCCCAGAAGATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSSHCS*SQKIKS
Trigger: TGACTTGATCTTCTGGGAGCAGGAACAATGACTACT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAAGTGCAAACATAGATTaGATAAGAAAGCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVSANID*IRKRVC
Trigger: ACACACACGCTTTCTTATGCAATCTATGTTTGCACT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGTTTCACAAACAAGTTaGACATTTCTCTGTAACTAC +
Preference number: 4 (lower is better)
Translates to: GISAWNDAHLERTGGIEGVSQTS*TFLCNY
Trigger: GTAGTTACAGAGAAATGTGCAACTTGTTTGTGAAAC...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp GTCCTCAATGAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAATCCCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: VLNEFSWLIDMEHFLLKSLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...GGATTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTCATTGAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562601.5
ENST00000568770.5
CDS-3UTR CCA 90 bp CATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGTTCACCTTGAAGTATaGGCTCGAGACCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: HGFKSAVMPSFKRSSLLIVHLEV*ARDLIA
Trigger: CGCTATGAGGTCTCGAGCCCATACTTCAAGGTGAAC...TATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGGGACCTCTTTTGTCTTaGGACAGGAGAAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMGPLLS*DRRSSC
Trigger: GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCC...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CAAAATGACTACACTGAGGTTTTTGGCATCATCACAGACTTCAGCTACTGTGGGCAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: QNDYTEVFGIITDFSYCGQFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTG...CCCACAGTAGCTGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGTCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CCA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTATGTGTATACAAGATaGTACCTGTACACCTCTTTG +
Preference number: 4 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVYVYTR*YLYTSL
Trigger: CAAAGAGGTGTACAGGTACCATCTTGTATACACATA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp CTTGTCGTTTCCCTTACAGTCACTGAAGGTCACTTGATTTTATGCTTTTCCATTATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVVSLTVTEGHLILCFSIIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...AATGGAAAAGCATAAAATCAAGTGACCTTCAGTGACTGTAAGGGAAACGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTTCCCTTACAGTCACTaGAGGTCAAGTTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMFPYSH*RSSLEL
Trigger: CAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACTTGGTGAATTTTGGTaGGTGATCATTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSLGEFW*VIIFVI
Trigger: GATGACAAAAATGATCACTCACCAAAATTCACCAAG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGAAACTCTTTCTTGGTaGATTTTGGTGAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSETLSW*ILVSDH
Trigger: ATGATCACTCACCAAAATTCACCAAGAAAGAGTTTC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGTGGATTTCAAATTTaGAAGGATCTGTATTCGGGT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCGFQI*KDLYSG
Trigger: ACCCGAATACAGATCCTTTCAAATTTGAAATCCACA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR TCA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAAATTTGCCCCTTTGAATaGTTTATAGCAAAGCACAGT +
Preference number: 4 (lower is better)
Translates to: LTSHGREGANNYVILHRKICPFE*FIAKHS
Trigger: ACTGTGCTTTGCTATAAATCATTCAAAGGGGCAAAT...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGTGTTGACATGTGCATaGCAACACAGATATAACTCT +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMVLTCA*QHRYNS
Trigger: AGAGTTATATCTGTGTTGTCATGCACATGTCAACAC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGGGACGAACAGAGTTTTaGCCACTGCAGTTATGTTTC +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMGRTEF*PLQLCF
Trigger: GAAACATAACTGCAGTGGGCAAAACTCTGTTCGTCC...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAGGACGAACAGAGTTTTaGCCACTGCAGTTATGTTTC +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLGRTEF*PLQLCF
Trigger: GAAACATAACTGCAGTGGGCAAAACTCTGTTCGTCC...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAATTTAAATATATCCTaGAAGGAGCCCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSNLNIS*KEPWMS
Trigger: AGACATCCAGGGCTCCTTGCAGGATATATTTAAATT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGGGCAGGTTGTAGTTTaGTTTGTTCAGATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMGQVVV*FVQILK
Trigger: CTTCAAAATCTGAACAAAGCAAACTACAACCTGCCC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR GCA 90 bp CATCATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAGATTGTGGGTTCTCTTaGCAACATCTCTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HHSVEKMDLKYRVLVGSKDCGFS*QHLLGK
Trigger: CTTTCCCAAGAGATGTTGGCAAGAGAACCCACAATC...TTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAGCTAGGCACAGAACTTaGCAAATCTTCATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLARHRT*QIFILP
Trigger: TGGCAAGATGAAGATTTGGCAAGTTCTGTGCCTAGC...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTCTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEILANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp GTAATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: VMHGFKSAVMPSFKRSSLMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...CAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp GTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 4 (lower is better)
Translates to: VEKMDLKYRVLVGSKMFVGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...CACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTAAATCTTGTGGAGTGTaGATGCACAGGCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIKSCGV*MHRLRF
Trigger: GAATCTAAGCCTGTGCATTCACACTCCACAAGATTT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGAACAAAACATCTTATaGTTCAGGAAATGCTACCAC +
Preference number: 4 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMEQNIL*FRKCYH
Trigger: GTGGTAGCATTTCCTGAATCATAAGATGTTTTGTTC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp TGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGGTTTTCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: CCNAFIQEKFAVNRIVGFLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...AAAACCCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCAAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVKFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CCA 90 bp ATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: IDMEHFLLKSRSAVQIFCKFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTT...GCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CCA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATAAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNKFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCCTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSLANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp CATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATACTTGCCAACATCTCTTaGGAAAGGCTGTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: HGFKSAVMPSFKRSSLLILANIS*ERLSLI
Trigger: AATCAGAGACAGCCTTTCCCAAGAGATGTTGGCAAG...TATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGAAAGTCAAATAAAATaGTTCAAAGGCGTATCAAGC +
Preference number: 4 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSESQIK*FKGVSS
Trigger: GCTTGATACGCCTTTGAACCATTTTATTTGACTTTC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
3UTR CAA 72 bp TTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTaGTGGATTTCAAATTTGAAAGGATCTGTATTCGGG +
Preference number: 4 (lower is better)
Translates to: LEIFQTLSGTAC*WISNLKGSVFG
Trigger: CCCGAATACAGATCCTTTCAAATTTGAAATCCACAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR TCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTATTCAGCTGGCTGATTaGTATGGAACACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIIQLAD*YGTLSA
Trigger: AGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAAT...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTCCCTTACAGTCACTaGAGGTCAAGTTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMFPYSH*RSSLEL
Trigger: CAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAA...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR TCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTATTCCCTTACAGTCACTaGAGGTCAAGTTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLFPYSH*RSSLEL
Trigger: CAATTCTAAACTTGACCTTCAGTGACTGTAAGGGAA...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp TTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGGGGAAAGGCTGTCTCTaGTTCTCTGGAATTAAAATG +
Preference number: 4 (lower is better)
Translates to: FKSAVMPSFKRSSLLIGLGKGCL*FSGIKM
Trigger: CATTTTAATTCCAGAGAATCAGAGACAGCCTTTCCC...CAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR TCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTATTGAAGTTCTTATCTaGAACCCTCATACACACACC +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIIEVLI*NPHTHT
Trigger: GGTGTGTGTATGAGGGTTTCAGATAAGAACTTCAAT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR GCA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTAGTAAAAGGTACTGTTaGTTAACAGTAAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFSKRYC*LTVSWS
Trigger: AGACCAACTTACTGTTAAGCAACAGTACCTTTTACT...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CCA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGCTCAATGAATTCAGCTaGCTGATTGATATGGAACAC +
Preference number: 4 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMLNEFS*LIDMEH
Trigger: GTGTTCCATATCAATCAGCCAGCTGAATTCATTGAG...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTATCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp GTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGCTGTTAATAGGATTGTaGGTTCTCTTGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: VEKMDLKYRVLVGSKMFVLLIGL*VLLPTS
Trigger: AGATGTTGGCAAGAGAACCCACAATCCTATTAACAG...CACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTGGGAAAAGCAATTTCTaGTCCTTACTTGACTTCGTT +
Preference number: 4 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIGKSNF*SLLDFV
Trigger: AACGAAGTCAAGTAAGGACCAGAAATTGCTTTTCCC...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR TCA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTATGAATTCAGCTGGCTaGTTGATATGGAACACTTTC +
Preference number: 4 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIMNSAG*LIWNTF
Trigger: GAAAGTGTTCCATATCAATCAGCCAGCTGAATTCAT...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCTCTCTGGAATTAAAATaGGAGATACCACAATGGACC +
Preference number: 4 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSSLELK*EIPQWT
Trigger: GGTCCATTGTGGTATCTCCCATTTTAATTCCAGAGA...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTACTGTTAATAGGATTGTaGGTTTTATCTCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLLLIGL*VLSHVS
Trigger: GCTGACATGAGATAAAACCCACAATCCTATTAACAG...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR GCA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCAATTTAAATATATCCTaGAAGGAGCCCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSNLNIS*KEPWMS
Trigger: AGACATCCAGGGCTCCTTGCAGGATATATTTAAATT...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR GCA 90 bp CATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAAATTTAAATATATCCTaGAAGGAGCCCTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: HGFKSAVMPSFKRSSLLINLNIS*KEPWMS
Trigger: AGACATCCAGGGCTCCTTGCAGGATATATTTAAATT...TATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CCA 90 bp GTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGAAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VEKMDLKYRVLVGSKMFVKFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTT...CACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CCA 90 bp ATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAAAGTTTAGAATTGACTaGTCCTCAATGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: MHGFKSAVMPSFKRSSLLKFRID*SSMNSA
Trigger: AGCTGAATTCATTGAGGACCAGTCAATTCTAAACTT...TAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
3UTR CAA 72 bp GATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTaGTTTGTGGATTTCAAATTTGAAAGGATCTGTATT +
Preference number: 4 (lower is better)
Translates to: DLGDLPDFIRNS*FVDFKFERICI
Trigger: AATACAGATCCTTTCAAATTTGAAATCCACAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
3UTR CAA 72 bp TTAAGACCCAGTGTATTTATTTGGGTAAAATGCAATTaGAGCTACTCTATGAGTGTGATGGTAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: LRPSVFIWVKCN*SYSMSVMVDGC
Trigger: ACAACCATCTACCATCACACTCATAGAGTAGCTCAAATTGCATTTTACCCAAATAAATACACTGGGTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS TCA 90 bp CAAGGTCATGGGCTGTGCATCCCATGTGCCAGGAAGCAGGTGGGCTaGTGCGGCATGGCCCACTGGTGGACTGAGAACACGTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QGHGLCIPCARKQVG*CGMAHWWTENTCPR
Trigger: CCTGGGGCACGTGTTCTCAGTCCACCAGTGGGCCATGCCGCATCAGCCCACCTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 90 bp TGCTGCCTACTGCTGGGTCCAAGGTCATGGGCTGTGCATCCCATGTaGCAGGAAGCAGGTGGGCTGATGCGGCATGGCCCACTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: CCLLLGPRSWAVHPM*QEAGGLMRHGPLVD
Trigger: GTCCACCAGTGGGCCATGCCGCATCAGCCCACCTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 90 bp GGGTCCAAGGTCATGGGCTGTGCATCCCATGTGCCAGGAAGCAGGTaGGCTGATGCGGCATGGCCCACTGGTGGACTGAGAACACGTGCC +
Preference number: 5 (lower is better)
Translates to: GSKVMGCASHVPGSR*ADAAWPTGGLRTRA
Trigger: GGCACGTGTTCTCAGTCCACCAGTGGGCCATGCCGCATCAGCCCACCTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGAGGGCCCCTGCCGCGTaGCAGTCCACTTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: MNVLPLPCRKRGARCARERAPAA*QSTLEF
Trigger: GAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCCT...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS CCA 90 bp GCCCACTGGTGGACTGAGAACACGTGCCCCAGGGAGCAGCCCGCCTaGAGGAGTAGTACCTGGAGCCACAGTTTTGAGCCACCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: AHWWTENTCPREQPA*RSSTWSHSFEPPGD
Trigger: ATCTCCAGGTGGCTCAAAACTGTGGCTCCAGGTACTACTCCTCCAGGCGGGCTGCTCCCTGGGGCACGTGTTCTCAGTCCACCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCATTTGGTGGTGAAATaGCCTGCTCTGCTCCTCACC +
Preference number: 5 (lower is better)
Translates to: LPCRKRGARCARETRDSAHLVVK*PALLLT
Trigger: GGTGAGGAGCAGAGCAGGCAATTTCACCACCAAATG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS TCA 90 bp AGCCAGTGGAAGGGCCTGGAACTGGGACTTGCACACAGGACCACCTaGCTGGGACAGGAGAACGCACAGAACGAGCGGAGTTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: SQWKGLELGLAHRTT*LGQENAQNERSSRL
Trigger: CAGCCGAGAACTCCGCTCGTTCTGTGCGTTCTCCTGTCCCAGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS GCA 90 bp GGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTTaGTGGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GSRPGICGPFSLGCS*WGNHAVQVGCLALG
Trigger: TCCCAGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CAA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTCTGCTCCTCACCTCCTaGGCTCAGGATCACGGCATC +
Preference number: 5 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCLLLTS*AQDHGI
Trigger: GATGCCGTGATCCTGAGCCAAGGAGGTGAGGAGCAG...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS GCA 90 bp GTCCGACTAGAAGCGCCCGGCGGCGTTTTCATTCATGCACGCGGCTaGACTGAGCATATTTTCCGTGGGAGCCAGGCTTTGAGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: VRLEAPGGVFIHARG*TEHIFRGSQALRRG
Trigger: GCCTCTCCTCAAAGCCTGGCTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAATGAAAACGCCGCCGGGCGCTTCTAGTCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000268613.14
ENST00000428848.7
ENST00000431540.7
ENST00000539548.6
ENST00000562601.5
ENST00000565636.5
ENST00000566333.1
ENST00000567109.6
ENST00000568770.5
ENST00000569144.5
CDS CCA 90 bp TCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTTGCTaGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCTGGGACAG +
Preference number: 5 (lower is better)
Translates to: SRPGICGPFSLGCSC*GNHAVQVGCLALGQ
Trigger: CTGTCCCAGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS CCA 90 bp GAGAACACGTGCCCCAGGGAGCAGCCCGCCTGGAGGAGTAGTACCTaGAGCCACAGTTTTGAGCCACCTGGAGATGCTCTTTCACCTCTC +
Preference number: 5 (lower is better)
Translates to: ENTCPREQPAWRSST*SHSFEPPGDALSPL
Trigger: GAGAGGTGAAAGAGCATCTCCAGGTGGCTCAAAACTGTGGCTCCAGGTACTACTCCTCCAGGCGGGCTGCTCCCTGGGGCACGTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTCCAGTGAGCCGGAACTaGGACCTTTCTGGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCPVSRN*DLSGLS
Trigger: TGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGG...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATGAACGTTCTCCCCCTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGGCAGTGTACACGCTGTaGTCGACAAATGGGGACTCA +
Preference number: 5 (lower is better)
Translates to: MNVLPLPCRKRGARCAREAVYTL*STNGDS
Trigger: TGAGTCCCCATTTGTCGACAACAGCGTGTACACTGC...CTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACGTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS TCA 90 bp ACTAGAAGCGCCCGGCGGCGTTTTCATTCATGCACGCGGCTGCACTaGGCATATTTTCCGTGGGAGCCAGGCTTTGAGGAGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TRSARRRFHSCTRLH*AYFPWEPGFEERLC
Trigger: GCAGAGCCTCTCCTCAAAGCCTGGCTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAATGAAAACGCCGCCGGGCGCTTCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000268613.14
ENST00000428848.7
ENST00000431540.7
ENST00000539548.6
ENST00000562601.5
ENST00000565636.5
ENST00000566333.1
ENST00000567109.6
ENST00000568770.5
ENST00000569144.5
CDS GCA 90 bp GGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTTaGTGGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GSRPGICGPFSLGCS*WGNHAVQVGCLAQF
Trigger: AAACTGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS CCA 90 bp AAGCTGCAGGTGGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTaGGATGTTCTTGCTGGGGGAACCATGCAGTGCAGGTGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: KLQVGHAQASVGHSH*DVLAGGTMQCRWVV
Trigger: AACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCCACCTGCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000569455.1
CDS CCA 90 bp AGTGGAAGGGCCTGGAACTGGGACTTGCACACAGGACCACCTGACTaGGACAGGAGAACGCACAGAACGAGCGGAGTTCTCGGCTGCATT +
Preference number: 5 (lower is better)
Translates to: SGRAWNWDLHTGPPD*DRRTHRTSGVLGCI
Trigger: AATGCAGCCGAGAACTCCGCTCGTTCTGTGCGTTCTCCTGTCCCAGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS CCA 90 bp ACTGAGCCTCAGACTCCAAGCCATTGGACAGCCAGTGGAAGGGCCTaGAACTGGGACTTGCACACAGGACCACCTGACTGGGACAGGAGA +
Preference number: 5 (lower is better)
Translates to: TEPQTPSHWTASGRA*NWDLHTGPPDWDRR
Trigger: TCTCCTGTCCCAGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACTGGCTGTCCAATGGCTTGGAGTCTGAGGCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCTCACTATCGACTACCTaGCCAACATCTCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LPCRKRGARCARETRDSASLSTT*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTGA...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGTGTCAACAGTCCCATaGATGGGGTTAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: LPCRKRGARCARETRDSAVSTVP*MGLIFS
Trigger: GCTGAATATTAACCCCATCAATGGGACTGTTGACAC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGAGGGCCCCTGCCGCGTaGCAGTCCACTTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLRAPAA*QSTLEF
Trigger: GAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCCT...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS GCA 90 bp TTGAACTCTGGAGATGGAGGTTGCAGTGAGCCGAGATCACGCCACTaGACTTCAGCCTGCATGGTTGAAGCTGCAGGTGGGTCACGCCCA +
Preference number: 5 (lower is better)
Translates to: LNSGDGGCSEPRSRH*TSACMVEAAGGSRP
Trigger: TGGGCGTGACCCACCTGCAGCTTCAACCATGCAGGCTGAAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCATCTCCAGAGTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS CCA 90 bp CTTCAAAACTGGAAAGCATGCTGCCTACTGCTGGGTCCAAGGTCATaGGCTGTGCATCCCATGTGCCAGGAAGCAGGTGGGCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: LQNWKACCLLLGPRS*AVHPMCQEAGGLMR
Trigger: CCGCATCAGCCCACCTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 90 bp GCCTCCGTCCTTGCCTTCAAAACTGGAAAGCATGCTGCCTACTGCTaGGTCCAAGGTCATGGGCTGTGCATCCCATGTGCCAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ASVLAFKTGKHAAYC*VQGHGLCIPCARKQ
Trigger: CTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAAAGACTGGGCCCTCGTaGACATCCAGGACAGTGATG +
Preference number: 5 (lower is better)
Translates to: QQSPSARSGRVATVNCQEKTGPS*TSRTVM
Trigger: CATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTT...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCGAGGATGCTCTTTGTTaGTTCAAGGATGAACGTTCT +
Preference number: 5 (lower is better)
Translates to: LPCRKRGARCARETRDSAEDALC*FKDERS
Trigger: AGAACGTTCATCCTTGAACAAACAAAGAGCATCCTC...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS CCA 90 bp TCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTTGCTaGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SRPGICGPFSLGCSC*GNHAVQVGCLAQFL
Trigger: AAGAAACTGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS GCA 90 bp TATGCCTCCGTCCTTGCCTTCAAAACTGGAAAGCATGCTGCCTACTaGTGGGTCCAAGGTCATGGGCTGTGCATCCCATGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YASVLAFKTGKHAAY*WVQGHGLCIPCARK
Trigger: CTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 90 bp TGCCTTGTATGCCTCCGTCCTTGCCTTCAAAACTGGAAAGCATGCTaGCTACTGCTGGGTCCAAGGTCATGGGCTGTGCATCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: CLVCLRPCLQNWKAC*LLLGPRSWAVHPMC
Trigger: GCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGCATACAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 90 bp CTTCCTTCTGCAAGTGGGAAAACTGAGCCTCAGACTCCAAGCCATTaGACAGCCAGTGGAAGGGCCTGGAACTGGGACTTGCACACAGGA +
Preference number: 5 (lower is better)
Translates to: LPSASGKTEPQTPSH*TASGRAWNWDLHTG
Trigger: TCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACTGGCTGTCCAATGGCTTGGAGTCTGAGGCTCAGTTTTCCCACTTGCAGAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACCCAGTGAGCCGGAACTaGGACCTTTCTGGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHPVSRN*DLSGLS
Trigger: TGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGG...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CTGCCCGGGGTTTCCGTTGATGATGGTGTAGGCAGCCCTCCATGCACCTGTGGTTCGAGAGTTTTGCCATaGACATCAGTGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LPGVSVDDGVGSPPCTCGSRVLP*TSVVST
Trigger: TGTGGAGACCACTGATGTCAATGGCAAAACTCTCGA...ACCACAGGTGCATGGAGGGCTGCCTACACCATCATCAACGGAAACCCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp GGTCATCTGCATCAAAGGCTGTCATCCGCATCACTGTGGTGCCTGTGGGTGACCCCTGCAGGAGCACACTaGTACCCTGAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: GHLHQRLSSASLWCLWVTPAGAH*YPEICD
Trigger: ATCACAGATCTCAGGGTACAAGTGTGCTCCTGCAGG...GGTCACCCACAGGCACCACAGTGATGCGGATGACAGCCTTTGATGCAGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CTGCCTTGCAGGAAGAGGGGAGCAAGGTGCGCCCGGGAGACGCGTGACAGTGCCCAGAAAGCTTTCAGATaGAAGAAGTATAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: LPCRKRGARCARETRDSAQKAFR*KKYSMN
Trigger: GTTCATGCTATACTTCTTCAATCTGAAAGCTTTCTG...GGCACTGTCACGCGTCTCCCGGGCGCACCTTGCTCCCCTCTTCCTGCAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS CCA 90 bp CCTCGACTGTGGCTTGAAACGTGGTGTCTGGCACATCCTAAGAAGTaGGTACCTGCTATCCAAAGGCCAGGCTGGAAGGATCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: PRLWLETWCLAHPKK*VPAIQRPGWKDQTD
Trigger: GTCTGTCTGATCCTTCCAGCCTGGCCTTTGGATAGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 90 bp AACTCCCACAGCTCCTTCCTCGACTGTGGCTTGAAACGTGGTGTCTaGCACATCCTAAGAAGTGGGTACCTGCTATCCAAAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: NSHSSFLDCGLKRGV*HILRSGYLLSKGQA
Trigger: AGCCTGGCCTTTGGATAGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGGAAGGAGCTGTGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGCATCCCTTCGTTGGTTaGAGGGTTGGTGTGGATTTC +
Preference number: 5 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLHPFVG*RVGVDF
Trigger: GAAATCCACACCAACCCTCAAACCAACGAAGGGATG...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CAGCAAAGTCCCAGTGCCCGTAGCGGGAGGGTTGCCACTGTCAATTGCCAGGAAAGGGCGTGTGTATTGTaGATCTTGGAGATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QQSPSARSGRVATVNCQERACVL*ILEIFQ
Trigger: CTGGAAGATCTCCAAGATCAACAATACACACGCCCT...TTCCTGGCAATTGACAGTGGCAACCCTCCCGCTACGGGCACTGGGACTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp GCAGCAGCACGAAGTTGGCATCATTCCTTCCTTCTGCAAGTGGGAAAACTGAGCTCAGACTCCAAGCCATaGGACAGCCAGTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: AAARSWHHSFLLQVGKLSSDSKP*DSQWKG
Trigger: GCCCTTCCACTGGCTGTCCAATGGCTTGGAGTCTGA...GCTCAGTTTTCCCACTTGCAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCACGTTCTCCCCCTGCCTaGCAGGAAGAGGGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PYQVQGVASPDPATGFVPRSPPA*QEEGSK
Trigger: CTTGCTCCCCTCTTCCTGCAAGGCAGGGGGAGAACG...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GGGGTCTGGGTAGAAGACTGGGCCCTCGTTGACATCCAGGACAGTGATGTGGACTCACTATCGACTACCTaGCCAACATCTCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GVWVEDWALVDIQDSDVDSLSTT*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTGA...GTCCACATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTTCTACCCAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp ATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGCCTGTCACTATCGGTTGCCACTGTCAATaGCCAGGAAGAGAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: IHSLSSEPELGPFWPVTIGCHCQ*PGREQC
Trigger: ACACTGCTCTCTTCCTGGCAATTGACAGTGGCAACC...GATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp GAGCAGTGTACACGCTGTTGTCGACAAATGGGGACTCACGGTCCAGCACAGCTGTGTTGCTATGGAAACTaGGGAGTCAAGCTTCAGACG +
Preference number: 5 (lower is better)
Translates to: EQCTRCCRQMGTHGPAQLCCYGN*GVKLQT
Trigger: CGTCTGAAGCTTGACTCCCAAGTTTCCATAGCAACA...CAGCTGTGCTGGACCGTGAGTCCCCATTTGTCGACAACAGCGTGTACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp GAAATCCAGGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTGCCTGGAACTGGGACTaGCACACAGGACCACCTGAC +
Preference number: 5 (lower is better)
Translates to: EIQECSPNLLQMLAAARSAWNWD*HTGPPD
Trigger: GTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGC...ACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCCTGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp GTCACTTGGGTGACATGGTGTGCCTCCAAGGACTTGAAAATTACAGGCACTGGGGTCACTGAAGGTCACTaGGGTGACATGGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: VTWVTWCASKDLKITGTGVTEGH*GDMVCL
Trigger: GAGGCACACCATGTCACCCAAGTGACCTTCAGTGAC...CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACACCATGTCACCCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CAA 90 bp AACAGAATACCTGATGGTTTGATGCTGCAGGGAGTCGGGGTCCGTGGCATTCACCAGTCCAGCCATATCTaGAGCCTCGATGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: NRIPDGLMLQGVGVRGIHQSSHI*SLDDQF
Trigger: GAACTGATCATCGAGGCTCAAGATATGGCTGGACTG...GTGAATGCCACGGACCCCGACTCCCTGCAGCATCAAACCATCAGGTATTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTCCTCATGCTGACCTaGATGCGGGAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVVLMLT*MREALE
Trigger: CTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGAC...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GTGGTCTGTCCTCATGCTGACCTTGATGCGGGAGGCCCTGGAGGGTTCAGGTGTAAGTGCAAACATAGATaGCATAAGAAAGCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VVCPHADLDAGGPGGFRCKCKHR*HKKACV
Trigger: CACACACGCTTTCTTATGCAATCTATGTTTGCACTT...ACACCTGAACCCTCCAGGGCCTCCCGCATCAAGGTCAGCATGAGGACAGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS TCA 90 bp GGCTCGAGACCTCATAGCGTAGCTTGTCGTTTCCCTTACAGTCACTaGAGGTCACACTGTCTGGAATTCCACCAACTCTCCTGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: GSRPHSVACRFPYSH*RSHCLEFHQLSCWL
Trigger: TAACCAGCAGGAGAGTTGGTGGAATTCCAGACAGTGTGACCTTCAGTGACTGTAAGGGAAACGACAAGCTACGCTATGAGGTCTCGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569454.1
CDS CCA 90 bp CTGGCACATCCTAAGAAGTGGGTACCTGCTATCCAAAGGCCAGGCTaGAAGGATCAGACAGACACAAAGGATGCCAAAGGGAATCAAGGT +
Preference number: 5 (lower is better)
Translates to: LAHPKKWVPAIQRPG*KDQTDTKDAKGNQG
Trigger: ACCTTGATTCCCTTTGGCATCCTTTGTGTCTGTCTGATCCTTCCAGCCTGGCCTTTGGATAGCAGGTACCCACTTCTTAGGATGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS-3UTR CAA 90 bp TTAGAATCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCAAGACTGGGCCCTCGTaGACATCCAGGACAGTGATG +
Preference number: 5 (lower is better)
Translates to: LESVRLWIRDTYKCRLVPKTGPS*TSRTVM
Trigger: CATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTT...GGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGATTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GGGAGATGGCTTGTCAGGCGTCTGCTGACGGATATTATACCGCAGGAGGGCATTTGCTTTGTTCAGATTTaGAAGAAGGCTTACCAGGGC +
Preference number: 5 (lower is better)
Translates to: GRWLVRRLLTDIIPQEGICFVQI*KKAYQG
Trigger: GCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGCA...AATGCCCTCCTGCGGTATAATATCCGTCAGCAGACGCCTGACAAGCCATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATCCTGCAGGAGCACACTaGTACCCTGAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SETVSNSAVRAQRSDICHPAGAH*YPEICD
Trigger: ATCACAGATCTCAGGGTACAAGTGTGCTCCTGCAGG...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGTGCAGGTGGGTTGTTaGGCCCTGGGACAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSVQVGC*ALGQEN
Trigger: GTTCTCCTGTCCCAGGGCCAAACAACCCACCTGCAC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGCAGTGCAGGTGGGTaGTTTGGCCCTGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCSAGG*FGPGTG
Trigger: TCCTGTCCCAGGGCCAAACAACCCACCTGCACTGCA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CAA 90 bp AGAGCAACTAAGCCGCCATCGCTGTTCACCTTGAAGTATGGGCTCGAGACCTCATGGACGAACAGAGTTTaGCCCACTGCAGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: RATKPPSLFTLKYGLETSWTNRV*PTAVMF
Trigger: AAACATAACTGCAGTGGGCAAAACTCTGTTCGTCCA...TGAGGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGGCGGCTTAGTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CAA 90 bp AGGCAGCCCTCCATGCACCTGTGGTGGGGTCATCCTTATCTTCAACTGTCAAATCACAATGGACCTCTTTaGTCTTGGGACAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: RQPSMHLWWGHPYLQLSNHNGPL*SWDRRS
Trigger: ACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...ATTTGACAGTTGAAGATAAGGATGACCCCACCACAGGTGCATGGAGGGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp ATCCACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTGGCCTGTCACTATCAATTCCTTTAGGCTCTaGATCCACTCCCTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: IHSLSSEPELGPFWPVTINSFRL*IHSLSS
Trigger: ACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATT...GATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGGCCCCTCGAGAGTTTaGCCATTGACATCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GISAWNDAHLERTGGIEGGPSRV*PLTSVV
Trigger: GACCACTGATGTCAATGGCAAAACTCTCGAGGGGCC...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TCCAAGGTCCGTGTCACGGAGACGCTCCCTGTGTTCTCATTGATTCTGAAAATTGCAGTGTACACGCTGTaGTCGACAAATGGGGACTCA +
Preference number: 5 (lower is better)
Translates to: SKVRVTETLPVFSLILKIAVYTL*STNGDS
Trigger: TGAGTCCCCATTTGTCGACAACAGCGTGTACACTGC...AATTTTCAGAATCAATGAGAACACAGGGAGCGTCTCCGTGACACGGACCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCATCTGCAGTAGGCACTTaGTCTGGTTTTGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PYQVQGVASPDPATGFVPSAVGT*SGFAPG
Trigger: CCCAGGAGCAAAACCAGACAAAGTGCCTACTGCAGA...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS CCA 90 bp GAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTTaGCATCATTCCTTCCTTCTGCAAGTGGGAAAACTGAGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ECSPNLLQMLAAARS*HHSFLLQVGKLSLR
Trigger: TCTGAGGCTCAGTTTTCCCACTTGCAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp AGGCTTACCAGGGCGTGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGCCCCTCGAGAGTTTaGCCATTGACATCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: RLTRACVLLILEIFQTLSGPSRV*PLTSVV
Trigger: GACCACTGATGTCAATGGCAAAACTCTCGAGGGGCC...TGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACACGCCCTGGTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATACCAGGGCGTGTGTATaGTTGATCTTGGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: SETVSNSAVRAQRSDICHTRACV*LILEIF
Trigger: GAAGATCTCCAAGATCAACAATACACACGCCCTGGT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGAGGGCCCCTGCCGCGTaGCAGTCCACTTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMRAPAA*QSTLEF
Trigger: GAATTCCAAAGTGGACTGCAACGCGGCAGGGGCCCT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp ATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCAAGTGCAGCCGCACCTaGTCCTCCCTCTCATGTGCT +
Preference number: 5 (lower is better)
Translates to: IDMEHFLLKSRSAVQIFCKCSRT*SSLSCA
Trigger: AGCACATGAGAGGGAGGACAAGGTGCGGCTGCACTT...GCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CAA 90 bp CTGGTCCTCAATGAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAAGTCCAACGTGGTCTCTaGAAGTGCAGCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: LVLNEFSWLIDMEHFLLKVQRGL*KCSRTL
Trigger: CAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGAC...TTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTCATTGAGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACTCACTGGGATGTTCTaGCTGGGGGAACCATGCAGT +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSLTGMF*LGEPCS
Trigger: ACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACCATCGCTGTTCACCTaGAAGTATGGGCTCGAGACC +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSPSLFT*KYGLET
Trigger: GGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGCCAGTGAGCCGGAACTaGGACCTTTCTGGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMPVSRN*DLSGLS
Trigger: TGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGG...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGGCCCCTCGAGAGTTTaGCCATTGACATCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVGPSRV*PLTSVV
Trigger: GACCACTGATGTCAATGGCAAAACTCTCGAGGGGCC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp ACAAATGGGGACTCACGGTCCAGCACAGCTGTGGTGTCAACAGTCCCATTGATGATGATCAGTTCATACTaGGGATTTTCCAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TNGDSRSSTAVVSTVPLMMISSY*GFSRVS
Trigger: AGAGACTCTGGAAAATCCCAAGTATGAACTGATCAT...CATCAATGGGACTGTTGACACCACAGCTGTGCTGGACCGTGAGTCCCCATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAAGACTGGGCCCTCGTaGACATCCAGGACAGTGATG +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSKTGPS*TSRTVM
Trigger: CATCACTGTCCTGGATGTCAACGAGGGCCCAGTCTT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGTTGCCACTGTCAATaGCCAGGAAGAGAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGCHCQ*PGREQC
Trigger: ACACTGCTCTCTTCCTGGCAATTGACAGTGGCAACC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TGGAGGCTGACAGCCCCCTTTTCTGACAGCAGTATGGAGATACCCACTGATGATTTCCTTGAAAAGACCTaGGAGCGTATGATCAGCTTA +
Preference number: 5 (lower is better)
Translates to: WRLTAPFSDSSMEIPTDDFLEKT*ERMISL
Trigger: TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAA...ATCATCAGTGGGTATCTCCATACTGCTGTCAGAAAAGGGGGCTGTCAGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGAGAGCCTACCAGCTaGAGAGAAAAGGAGTCATGC +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGEPTS*REKESC
Trigger: GCATGACTCCTTTTCTCTCAAGCTGGTAGGCTCTCC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATCATTCCCACCATTTTTaGCTGTCTCTCCATGTCTTG +
Preference number: 5 (lower is better)
Translates to: SETVSNSAVRAQRSDICHHSHHF*LSLHVL
Trigger: CAAGACATGGAGAGACAGCAAAAAATGGTGGGAATG...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTTCGAGAGTTTTGCCATaGACATCAGTGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: GISAWNDAHLERTGGIEGSRVLP*TSVVST
Trigger: TGTGGAGACCACTGATGTCAATGGCAAAACTCTCGA...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTCAGTCCAGCCATATCTaGAGCCTCGATGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVQSSHI*SLDDQF
Trigger: GAACTGATCATCGAGGCTCAAGATATGGCTGGACTG...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGCATCCCTTCGTTGGTTaGAGGGTTGGTGTGGATTTC +
Preference number: 5 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRHPFVG*RVGVDF
Trigger: GAAATCCACACCAACCCTCAAACCAACGAAGGGATG...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAGGTTGCCACTGTCAATaGCCAGGAAGAGAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSGCHCQ*PGREQC
Trigger: ACACTGCTCTCTTCCTGGCAATTGACAGTGGCAACC...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATACTACACTGAGGTTTTaGGCATCATCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: SETVSNSAVRAQRSDICHTTLRF*ASSQTS
Trigger: TGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACCTGCAGGAGCACACTaGTACCCTGAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSPAGAH*YPEICD
Trigger: ATCACAGATCTCAGGGTACAAGTGTGCTCCTGCAGG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCCACCTTGCTTAACCTaGCAAGGAAGAATGGCATCA +
Preference number: 5 (lower is better)
Translates to: GISAWNDAHLERTGGIEGPPCLT*QGRMAS
Trigger: TGATGCCATTCTTCCTTGCAAGGTTAAGCAAGGTGG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTCCCTTTTCTTGGCATTaGGTGGTGAAATTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GISAWNDAHLERTGGIEGPFSWH*VVKLPA
Trigger: AGCAGGCAATTTCACCACCAAATGCCAAGAAAAGGG...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp AGTGACAATGTCTCCTTTCTCAGGATCGATGTAGAACATGTTGGGAGATGGCTTTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SDNVSFLRIDVEHVGRWLWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...AAGCCATCTCCCAACATGTTCTACATCGATCCTGAGAAAGGAGACATTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACAGTCCAGCCATATCTaGAGCCTCGATGATCAGTTC +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSQSSHI*SLDDQF
Trigger: GAACTGATCATCGAGGCTCAAGATATGGCTGGACTG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCACATCCCTTCGTTGGTTaGAGGGTTGGTGTGGATTTC +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSHPFVG*RVGVDF
Trigger: GAAATCCACACCAACCCTCAAACCAACGAAGGGATG...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGCAGTGTACACGCTGTaGTCGACAAATGGGGACTCA +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMAVYTL*STNGDS
Trigger: TGAGTCCCCATTTGTCGACAACAGCGTGTACACTGC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAAGGGCGTGTGTATTGTaGATCTTGGAGATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVRACVL*ILEIFQ
Trigger: CTGGAAGATCTCCAAGATCAACAATACACACGCCCT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GAGCCATCACACCCGACTGCATCTGATCAGTTTAGATCAGTTGTTTCCATATTCCTATTAACCTCTAAGTaGGCCAGGCCCTCATTCAAG +
Preference number: 5 (lower is better)
Translates to: EPSHPTASDQFRSVVSIFLLTSK*ARPSFK
Trigger: CTTGAATGAGGGCCTGGCCAACTTAGAGGTTAATAG...GAATATGGAAACAACTGATCTAAACTGATCAGATGCAGTCGGGTGTGATGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp ACTCTATTAACCTCTAAGTTGGCCAGGCCCTCATTCAAGAATTTCCACTTTGGGGTGGAATCACCTTCCTaGAAAAGACCTTGGAGCGTA +
Preference number: 5 (lower is better)
Translates to: TLLTSKLARPSFKNFHFGVESPS*KRPWSV
Trigger: TACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCAC...CCCAAAGTGGAAATTCTTGAATGAGGGCCTGGCCAACTTAGAGGTTAATAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCAGGTCTTGGGACTGTaGACAGATGGCCATGACTAT +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVQVLGL*TDGHDY
Trigger: ATAGTCATGGCCATCTGTCAACAGTCCCAAGACCTG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TGCTCAGTGGAAATAAAACCCTCAGACCTGTGCTCAGTAATTGGGAAAAGCAATAAAAATCCCCAGGTCTaGGGACTGTTGACAGATGGC +
Preference number: 5 (lower is better)
Translates to: CSVEIKPSDLCSVIGKSNKNPQV*GLLTDG
Trigger: GCCATCTGTCAACAGTCCCAAGACCTGGGGATTTTT...ATTGCTTTTCCCAATTACTGAGCACAGGTCTGAGGGTTTTATTTCCACTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TCAGAAACTGTAAGCAATTCAGCAGTGAGGGCCCAAAGGAGCGACATCTGCCATAGAGAACTGGCGGTATaGAAGGTGACTTTTATTGAA +
Preference number: 5 (lower is better)
Translates to: SETVSNSAVRAQRSDICHRELAV*KVTFIE
Trigger: TTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCT...ATGGCAGATGTCGCTCCTTTGGGCCCTCACTGCTGAATTGCTTACAGTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCAGATTTCCTTCTCATGGGATGTGCCTCCAAGGACTaGAAAATTACAGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: LLLTKHLALSTADFLLMGCASKD*KITGTG
Trigger: CCCAGTGCCTGTAATTTTCAAGTCCTTGGAGGCACA...TCCCATGAGAAGGAAATCTGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCCACAATGGACCTCTTTaGTCTTGGGACAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVHNGPL*SWDRRS
Trigger: ACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAACACAATGGACCTCTTTaGTCTTGGGACAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LTSHGREGANNYVILHRKHNGPL*SWDRRS
Trigger: ACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCACTACACTGAGGTTTTaGGCATCATCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCTTLRF*ASSQTS
Trigger: TGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGT...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGGGCGTGTGTATTGTaGATCTTGGAGATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSRACVL*ILEIFQ
Trigger: CTGGAAGATCTCCAAGATCAACAATACACACGCCCT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAACCAGGGCGTGTGTATaGTTGATCTTGGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSTRACV*LILEIF
Trigger: GAAGATCTCCAAGATCAACAATACACACGCCCTGGT...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGACCAGGGCGTGTGTATaGTTGATCTTGGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKTRACV*LILEIF
Trigger: GAAGATCTCCAAGATCAACAATACACACGCCCTGGT...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATGTTGCTATGGAAACTaGGGAGTCAAGCTTCAGACG +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSCCYGN*GVKLQT
Trigger: CGTCTGAAGCTTGACTCCCAAGTTTCCATAGCAACA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CATAAGAGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCGAGAAGGCAATGATTTaGATTTTGGGGATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HKSQCGITFLEKTLERMIEKAMI*ILGICP
Trigger: TGGGCAGATCCCCAAAATCAAAATCATTGCCTTCTC...GATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp GGTATATCTGCCTGGAATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTATGTCAGCCCTTTTCTaGGCATTTGGTGGTGAAATT +
Preference number: 5 (lower is better)
Translates to: GISAWNDAHLERTGGIEGMSALF*AFGGEI
Trigger: AATTTCACCACCAAATGCCAAGAAAAGGGCTGACAT...ACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCATTCCAGGCAGATATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TCAGTACGACTGTGGATTCGGGACACATACAAATGCAGGTTGGTGCCCATGAAATGGTCCGTCTCATCTTaGAGTATGCAATTACCTTTA +
Preference number: 5 (lower is better)
Translates to: SVRLWIRDTYKCRLVPMKWSVSS*SMQLPL
Trigger: TAAAGGTAATTGCATACTCAAAGATGAGACGGACCA...TTTCATGGGCACCAACCTGCATTTGTATGTGTCCCGAATCCACAGTCGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTATGGAATGATGCTCATTaGGAGAGAACTGGCGGTATT +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVWNDAH*ERTGGI
Trigger: AATACCGCCAGTTCTCTCCAAATGAGCATCATTCCA...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CTCTCCATGTCTTGTATATGCTTTCATGTGAACACGGTCACAACTGCAGAATTTCTCCCCTCAGTTGGTTaGGTAGTGAATGGGTACTCT +
Preference number: 5 (lower is better)
Translates to: LSMSCICFHVNTVTTAEFLPSVG*VVNGYS
Trigger: AGAGTACCCATTCACTACCAAACCAACTGAGGGGAG...AAATTCTGCAGTTGTGACCGTGTTCACATGAAAGCATATACAAGACATGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCCCATCGCTGTTCACCTaGAAGTATGGGCTCGAGACC +
Preference number: 5 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSPSLFT*KYGLET
Trigger: GGTCTCGAGCCCATACTTCAAGGTGAACAGCGATGG...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTCACTATCGACTACCTaGCCAACATCTCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVSLSTT*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGGTAGTCGATAGTGA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGAGAGTTTTGCCATaGACATCAGTGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMSRVLP*TSVVST
Trigger: TGTGGAGACCACTGATGTCAATGGCAAAACTCTCGA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTTCCTCGACTGTGGCTaGAAACTCTTTCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVFLDCG*KLFLGE
Trigger: TTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGAA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CGACATGTTAACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCATTCCTCGACTGTGGCTaGAAACTCTTTCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: RHVNTPEKVVIVPAPRRSFLDCG*KLFLGE
Trigger: TTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGAA...TGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTTAACATGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCGTGTCAACAGTCCCATaGATGGGGTTAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVVSTVP*MGLIFS
Trigger: GCTGAATATTAACCCCATCAATGGGACTGTTGACAC...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp GAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGGTGTCAACAGTCCCATaGATGGGGTTAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: ELKWEIPQWTSFVLGQEKVSTVP*MGLIFS
Trigger: GCTGAATATTAACCCCATCAATGGGACTGTTGACAC...CTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp CCCTATCAAGTTCAAGGTGTGGCATCTCCTGATCCAGCAACAGGATTTGTTCCATTGTGGATTTCAAATTaGAAAGGATCTGTATTCGGG +
Preference number: 5 (lower is better)
Translates to: PYQVQGVASPDPATGFVPLWISN*KGSVFG
Trigger: CCCGAATACAGATCCTTTCAAATTTGAAATCCACAA...TGGAACAAATCCTGTTGCTGGATCAGGAGATGCCACACCTTGAACTTGATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGCTTTGTTCAGATTTaGAAGAAGGCTTACCAGGGC +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCFVQI*KKAYQG
Trigger: GCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGCA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp ATTGATATGGAACACTTTCTGCTGAAATCCAGGAGTGCAGTCCAAATCTTCTGCTTTACCTGGATCCTTTaGCCTTTGTGGTCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: IDMEHFLLKSRSAVQIFCFTWIL*PLWSAR
Trigger: TCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAA...GCAGAAGATTTGGACTGCACTCCTGGATTTCAGCAGAAAGTGTTCCATATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CAA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATTTGCCCAGACTGGTCTaGAACTTCTGGCCTCAAGCC +
Preference number: 5 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDLPRLV*NFWPQA
Trigger: GGCTTGAGGCCAGAAGTTCAAGACCAGTCTGGGCAA...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATTGGGGTTTCACCAGGTaGCCCAGACTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDWGFTR*PRLVLN
Trigger: GTTCAAGACCAGTCTGGGCAACCTGGTGAAACCCCA...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp CTTGTCGTTTCCCTTACAGTCACTGAAGGTCACTTGATTTTATGCTTTTCCATTAGCAGCAGCACGAAGTaGGCATCATTCCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LVVSLTVTEGHLILCFSISSSTK*ASFLPS
Trigger: AGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCT...AATGGAAAAGCATAAAATCAAGTGACCTTCAGTGACTGTAAGGGAAACGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp CTAACAAGCCATGGAAGGGAAGGGGCAAATAATTACGTTATCTTGCACAGGAAATGGCTGAAGTTTACATaGGAGGGTGACTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: LTSHGREGANNYVILHRKWLKFT*EGDFLI
Trigger: AATCAGGAAGTCACCCTCCAATGTAAACTTCAGCCA...TTTCCTGTGCAAGATAACGTAATTATTTGCCCCTTCCCTTCCATGGCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATCTTGCTTTGTCTACTGCAGATTTCCTTCTCATGGGAGCCCAGGCTTTTAAAAATTACAGGCACTGGGTaGCTGCTGTTAACTAAGCAT +
Preference number: 5 (lower is better)
Translates to: ILLCLLQISFSWEPRLLKITGTG*LLLTKH
Trigger: ATGCTTAGTTAACAGCAGCAACCCAGTGCCTGTAAT...TTTTAAAAGCCTGGGCTCCCATGAGAAGGAAATCTGCAGTAGACAAAGCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGGACGAACAGAGTTTaGCCCACTGCAGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMWTNRV*PTAVMF
Trigger: AAACATAACTGCAGTGGGCAAAACTCTGTTCGTCCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGGTTTTCACAATGGACCTCTTTaGTCTTGGGACAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: CCNAFIQEKFAVNRIVGFHNGPL*SWDRRS
Trigger: ACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...AAAACCCACAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGAATTCCTTTAGGCTCTaGATCCACTCCCTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMNSFRL*IHSLSS
Trigger: ACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATT...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAATGATCAGTTCATACTaGGGATTTTCCAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVMISSY*GFSRVS
Trigger: AGAGACTCTGGAAAATCCCAAGTATGAACTGATCAT...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCACTACACTGAGGTTTTaGGCATCATCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVTTLRF*ASSQTS
Trigger: TGAAGTCTGTGATGATGCCAAAAACCTCAGTGTAGT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp AATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAAGTTCTTGCTTGTGGATTTCAAATTaGAAAGGATCTGTATTCGGG +
Preference number: 5 (lower is better)
Translates to: NGRYHNGPLLSWDRRSSCLWISN*KGSVFG
Trigger: CCCGAATACAGATCCTTTCAAATTTGAAATCCACAA...GCAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTGCTTTGTTCAGATTTaGAAGAAGGCTTACCAGGGC +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMCFVQI*KKAYQG
Trigger: GCCCTGGTAAGCCTTCTTCAAAATCTGAACAAAGCA...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATAGTGTACAACTCTCATaGGAGGCTGACAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDSVQLS*EADSPL
Trigger: AAGGGGGCTGTCAGCCTCCAATGAGAGTTGTACACT...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTAGGAAATGCTACCACTTaGGCCTATAAGAATTGGTTT +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVGNATT*AYKNWF
Trigger: AAACCAATTCTTATAGGCCAAAGTGGTAGCATTTCC...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGTGTGATGGTAGATGGTaGTTCCATTTATCAGACTGT +
Preference number: 5 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRCDGRW*FHLSDC
Trigger: ACAGTCTGATAAATGGAACAACCATCTACCATCACA...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp TACCTGTACACCTCTTTGTATGCATGTATGACCTCCATGATGACAGGTGCAGTTTGGGTAAAATGCAATTaGAGCTACTCTATGAGTGTG +
Preference number: 5 (lower is better)
Translates to: YLYTSLYACMTSMMTGAVWVKCN*SYSMSV
Trigger: CACACTCATAGAGTAGCTCAAATTGCATTTTACCCA...AACTGCACCTGTCATCATGGAGGTCATACATGCATACAAAGAGGTGTACAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCATGATCAGTTCATACTaGGGATTTTCCAGAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVMISSY*GFSRVS
Trigger: AGAGACTCTGGAAAATCCCAAGTATGAACTGATCAT...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp TGTGTATTGTTGATCTTGGAGATCTTCCAGACTTTATCAGGAACAGCTTGTTTGTTCCTCGACTGTGGCTaGAAACTCTTTCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: CVLLILEIFQTLSGTACLFLDCG*KLFLGE
Trigger: TTCACCAAGAAAGAGTTTCAAGCCACAGTCGAGGAA...CAAACAAGCTGTTCCTGATAAAGTCTGGAAGATCTCCAAGATCAACAATACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp TATGCATGTATGACCTCCATGATGACAGGTGCAGTTGTACATTTACTGAGGAGGTGTGTATTGTTGATCTaGGAGATCTTCCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: YACMTSMMTGAVVHLLRRCVLLI*EIFQTL
Trigger: TAAAGTCTGGAAGATCTCCAAGATCAACAATACACA...CCTCCTCAGTAAATGTACAACTGCACCTGTCATCATGGAGGTCATACATGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp AGCCAATGTGGAATCACCTTCCTTGAAAAGACCTTGGAGCGTATGATCAGCTTAATTCTTCATTTCCAGTaGTTAAGCAAGGTACTCAAG +
Preference number: 5 (lower is better)
Translates to: SQCGITFLEKTLERMISLILHFQ*LSKVLK
Trigger: CTTGAGTACCTTGCTTAACAACTGGAAATGAAGAAT...TAAGCTGATCATACGCTCCAAGGTCTTTTCAAGGAAGGTGATTCCACATTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp TCCCTACCAATGAGACGGCACGTGGAAAGTCAAATAAAATGGTTCAAAGGCGTACTTTTATTTTCGGGTTaGCAAACAACGGTAGTCAAT +
Preference number: 5 (lower is better)
Translates to: SLPMRRHVESQIKWFKGVLLFSG*QTTVVN
Trigger: ATTGACTACCGTTGTTTGCAAACCCGAAAATAAAAG...TACGCCTTTGAACCATTTTATTTGACTTTCCACGTGCCGTCTCATTGGTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ACTGGGTTGCTGCTGTTAACTAAGCATCTTGCTTTGTCTACTGCAGATTTCCTTACTAAGCATCTTGCTTaGTCTACTGCAGATTTCCTT +
Preference number: 5 (lower is better)
Translates to: TGLLLLTKHLALSTADFLTKHLA*STADFL
Trigger: AAGGAAATCTGCAGTAGACAAAGCAAGATGCTTAGT...AAGGAAATCTGCAGTAGACAAAGCAAGATGCTTAGTTAACAGCAGCAACCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569144.5
CDS GCA 90 bp CATGAAATAATAGTCCTGGAAGCAATCTGTTTACCTGGATCCTTTTaGCTTTGTGGTCAGCAAGACTGTTACTATCTCGGGCTTTATTTT +
Preference number: 5 (lower is better)
Translates to: HEIIVLEAICLPGSF*LCGQQDCYYLGLYF
Trigger: AAAATAAAGCCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGGACTATTATTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CAA 90 bp CATCATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAATGGACGAACAGAGTTTaGCCCACTGCAGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: HHSVEKMDLKYRVLVGSKWTNRV*PTAVMF
Trigger: AAACATAACTGCAGTGGGCAAAACTCTGTTCGTCCA...TTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp GGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATGGACGAACAGAGTTTaGCCCACTGCAGTTATGTTT +
Preference number: 5 (lower is better)
Translates to: GFKSAVMPSFKRSSLLIGWTNRV*PTAVMF
Trigger: AAACATAACTGCAGTGGGCAAAACTCTGTTCGTCCA...TCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CAA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp TTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATAGGATTGTGGACCTCTTTTGTCTaGGGACAGGAGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: FKSAVMPSFKRSSLLIGLWTSFV*GQEKFL
Trigger: CAAGAACTTCTCCTGTCCCAAGACAAAAGAGGTCCA...CAATCCTATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CAA 90 bp GAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTCACAATGGACCTCTTTaGTCTTGGGACAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: EKMDLKYRVLVGSKMFVIHNGPL*SWDRRS
Trigger: ACTTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...AATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTAATTCCTTTAGGCTCTaGATCCACTCCCTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: MMLIWRELAVLKVTFIEINSFRL*IHSLSS
Trigger: ACTGGAAAGGGAGTGGATCAAGAGCCTAAAGGAATT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTTGTGGATTTCAAATTaGAAAGGATCTGTATTCGGG +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVLWISN*KGSVFG
Trigger: CCCGAATACAGATCCTTTCAAATTTGAAATCCACAA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp CACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGTCTGTGTATTGTTGATCTaGGAGATCTTCCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: HTRKSSHCSCSQKIKSYVCVLLI*EIFQTL
Trigger: TAAAGTCTGGAAGATCTCCAAGATCAACAATACACA...GACATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000567109.6
CDS-3UTR CAA 90 bp GGAATTAAAATGGGAGATACCACAATGGACCTCTTTTGTCTTGGGACAGGAGAATGTGTATTGTTGATCTaGGAGATCTTCCAGACTTTA +
Preference number: 5 (lower is better)
Translates to: GIKMGDTTMDLFCLGTGECVLLI*EIFQTL
Trigger: TAAAGTCTGGAAGATCTCCAAGATCAACAATACACA...TTCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTATCTCCCATTTTAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539548.6
CDS-3UTR CAA 90 bp ATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGATTTATTCCGGATTGTGGGTTCTCTaGCCAACATCTCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: MDLKYRVLVGSKMFVIYSGLWVL*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGAGAACCCACAATCC...GGAATAAATCACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp CATTCTGTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTCGCTGTTAATAGGATaGTGGGTTCTCTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: HSVEKMDLKYRVLVGSKMSLLIG*WVLLPT
Trigger: TGTTGGCAAGAGAACCCACAATCCTATTAACAGCGA...CATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTACAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp CTGGTCCTCAATGAATTCAGCTGGCTGATTGATATGGAACACTTTCTGCTGAAAGTCACTGAAGGTCACTaGATTTTATGCTTTTCCATT +
Preference number: 5 (lower is better)
Translates to: LVLNEFSWLIDMEHFLLKVTEGH*ILCFSI
Trigger: AATGGAAAAGCATAAAATCAAGTGACCTTCAGTGAC...TTTCAGCAGAAAGTGTTCCATATCAATCAGCCAGCTGAATTCATTGAGGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTAGATGGCAGTGTAAATaGGTTGTAGTCCTCGAACTC +
Preference number: 5 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIRWQCK*VVVLEL
Trigger: GAGTTCGAGGACTACAACCAATTTACACTGCCATCT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTTACCTGTACACCTCTTaGTATGCATGTATGACCTCC +
Preference number: 5 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIYLYTS*YACMTS
Trigger: GGAGGTCATACATGCATACAAAGAGGTGTACAGGTA...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp ATGATGCTCATTTGGAGAGAACTGGCGGTATTGAAGGTGACTTTTATTGAAATTATCCAGCAACAGGATTaGTTCCAGAGAAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: MMLIWRELAVLKVTFIEIIQQQD*FQRKIP
Trigger: GGGGATTTTTCTCTGGAACAAATCCTGTTGCTGGAT...AATTTCAATAAAAGTCACCTTCAATACCGCCAGTTCTCTCCAAATGAGCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GTAATGCATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTGCCAAATCTTCATCTaGCCAACATCTCTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VMHGFKSAVMPSFKRSSLCQIFI*PTSLGK
Trigger: TTTCCCAAGAGATGTTGGCAAGATGAAGATTTGGCA...CAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATGCATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS CCA 90 bp AATAGTCCTGGAAGCAATCTGTTTACCTGGATCCTTTTGCCTTTGTaGTCAGCAAGACTGTTACTATCTCGGGCTTTATTTTTGATAAAT +
Preference number: 5 (lower is better)
Translates to: NSPGSNLFTWILLPL*SARLLLSRALFLIN
Trigger: ATTTATCAAAAATAAAGCCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGGACTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS-3UTR CAA 90 bp AACACACCAGAAAAAGTAGTCATTGTTCCTGCTCCCAGAAGATCAAGTCATATGGAGCCAAAGTCTTATTaGATACCTACCATGAAATCT +
Preference number: 5 (lower is better)
Translates to: NTPEKVVIVPAPRRSSHMEPKSY*IPTMKS
Trigger: AGATTTCATGGTAGGTATCAAATAAGACTTTGGCTC...CATATGACTTGATCTTCTGGGAGCAGGAACAATGACTACTTTTTCTGGTGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567109.6
CDS-3UTR CAA 90 bp GTAGAGAAAATGGATTTGAAATACCGAGTGCTAGTGGGAAGTAAAATGTTTGTGGTAGAGAAAATGGATTaGAAATACCGAGTGCTAGTG +
Preference number: 5 (lower is better)
Translates to: VEKMDLKYRVLVGSKMFVVEKMD*KYRVLV
Trigger: CACTAGCACTCGGTATTTCAAATCCATTTTCTCTAC...CACAAACATTTTACTTCCCACTAGCACTCGGTATTTCAAATCCATTTTCTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431540.7
CDS-3UTR CAA 90 bp CATGGATTTAAATCTGCTGTAATGCCTTCATTCAAGAGAAGTTCGCTGTTAATATCGCTGTTAATAGGATaGTGGGTTTTATCTCATGTC +
Preference number: 5 (lower is better)
Translates to: HGFKSAVMPSFKRSSLLISLLIG*WVLSHV
Trigger: GACATGAGATAAAACCCACAATCCTATTAACAGCGA...TATTAACAGCGAACTTCTCTTGAATGAAGGCATTACAGCAGATTTAAATCCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565636.5
CDS-3UTR CAA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATAGTCTAAAAGCATCTTaGAGTGACATTGCTTACAGT +
Preference number: 5 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDSLKAS*SDIAYS
Trigger: ACTGTAAGCAATGTCACTCAAAGATGCTTTTAGACT...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS-3UTR CAA 90 bp TCTGTGTCTAAAAATTCCCAGAAGCCAATGTCATACTCTCACCATTATTTTGATGGAATTCAGGATGAGTaGAGCTTAATCCATAGAATA +
Preference number: 5 (lower is better)
Translates to: SVSKNSQKPMSYSHHYFDGIQDE*SLIHRI
Trigger: TATTCTATGGATTAAGCTCAACTCATCCTGAATTCC...ATCAAAATAATGGTGAGAGTATGACATTGGCTTCTGGGAATTTTTAGACACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567445.1
CDS TCA 72 bp GCAGGTGGGCTGATGCGGCATGGCCCACTGGTGGACTaGGAACACGTGCCCCAGGGAGCAGCCCGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AGGLMRHGPLVD*EHVPQGAARLE
Trigger: CTCCAGGCGGGCTGCTCCCTGGGGCACGTGTTCTCAGTCCACCAGTGGGCCATGCCGCATCAGCCCACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS TCA 72 bp GGGCTGTGCATCCCATGTGCCAGGAAGCAGGTGGGCTaGTGCGGCATGGCCCACTGGTGGACTGAGAACACG +
Preference number: 6 (lower is better)
Translates to: GLCIPCARKQVG*CGMAHWWTENT
Trigger: CGTGTTCTCAGTCCACCAGTGGGCCATGCCGCATCAGCCCACCTGCTTCCTGGCACATGGGATGCACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp TGGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTaGCTGGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: WVTPRHLWAILTGMF*LGEPCSAGGLFGPG
Trigger: CCCAGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS CCA 72 bp GTGGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTaGGATGTTCTTGCTGGGGGAACCATGCAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: VGHAQASVGHSH*DVLAGGTMQCR
Trigger: CCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000569455.1
CDS CCA 72 bp TGCCCCAGGGAGCAGCCCGCCTGGAGGAGTAGTACCTaGAGCCACAGTTTTGAGCCACCTGGAGATGCTCTT +
Preference number: 6 (lower is better)
Translates to: CPREQPAWRSST*SHSFEPPGDAL
Trigger: AAGAGCATCTCCAGGTGGCTCAAAACTGTGGCTCCAGGTACTACTCCTCCAGGCGGGCTGCTCCCTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp CCAAGCCATTGGACAGCCAGTGGAAGGGCCTGGAACTaGGACTTGCACACAGGACCACCTGACTGGGACAGG +
Preference number: 6 (lower is better)
Translates to: PSHWTASGRAWN*DLHTGPPDWDR
Trigger: CCTGTCCCAGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTTCCACTGGCTGTCCAATGGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS TCA 72 bp AAGGGCCTGGAACTGGGACTTGCACACAGGACCACCTaGCTGGGACAGGAGAACGCACAGAACGAGCGGAGT +
Preference number: 6 (lower is better)
Translates to: KGLELGLAHRTT*LGQENAQNERS
Trigger: ACTCCGCTCGTTCTGTGCGTTCTCCTGTCCCAGTCAGGTGGTCCTGTGTGCAAGTCCCAGTTCCAGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS GCA 72 bp GAAGCGCCCGGCGGCGTTTTCATTCATGCACGCGGCTaGACTGAGCATATTTTCCGTGGGAGCCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: EAPGGVFIHARG*TEHIFRGSQAL
Trigger: CAAAGCCTGGCTCCCACGGAAAATATGCTCAGTGCAGCCGCGTGCATGAATGAAAACGCCGCCGGGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000268613.14
ENST00000428848.7
ENST00000431540.7
ENST00000539548.6
ENST00000562601.5
ENST00000565636.5
ENST00000566333.1
ENST00000567109.6
ENST00000568770.5
ENST00000569144.5
CDS CCA 72 bp TGGAAAGCATGCTGCCTACTGCTGGGTCCAAGGTCATaGGCTGTGCATCCCATGTGCCAGGAAGCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: WKACCLLLGPRS*AVHPMCQEAGG
Trigger: CCCACCTGCTTCCTGGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp TGGGTCACGCCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTaGCTGGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: WVTPRHLWAILTGMF*LGEPCSAGGLFGPV
Trigger: AACTGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGGCGTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS TCA 72 bp TGCAGGTGGGTTGTTTGGCCCAGTTTCTTCATCTGTTaGAAGGGCACGATAGGCCGGGCGCTGTGGCTCACG +
Preference number: 6 (lower is better)
Translates to: CRWVVWPSFFIC*KGTIGRALWLT
Trigger: CGTGAGCCACAGCGCCCGGCCTATCGTGCCCTTTCAACAGATGAAGAAACTGGGCCAAACAACCCACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS CCA 72 bp TGGGATGTTCTTGCTGGGGGAACCATGCAGTGCAGGTaGGTTGTTTGGCCCTGGGACAGGAGAACGCACAGA +
Preference number: 6 (lower is better)
Translates to: WDVLAGGTMQCR*VVWPWDRRTHR
Trigger: TCTGTGCGTTCTCCTGTCCCAGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268613.14
CDS CCA 72 bp GGCATCTGTGGGCCATTCTCACTGGGATGTTCTTGCTaGGGGAACCATGCAGTGCAGGTGGGTTGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: GICGPFSLGCSC*GNHAVQVGCLA
Trigger: GGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000569455.1
CDS CCA 72 bp CACTCCCTTTCCAGTGAGCCGGAACTTGGACCTTTCTaGCCTGTCACTATCGACTACCTGCAAGGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: HSLSSEPELGPF*PVTIDYLQGAL
Trigger: CAGGGCTCCTTGCAGGTAGTCGATAGTGACAGGCCAGAAAGGTCCAAGTTCCGGCTCACTGGAAAGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428848.7
CDS CCA 72 bp GCAAGTGGGAAAACTGAGCCTCAGACTCCAAGCCATTaGACAGCCAGTGGAAGGGCCTGGAACTGGGACTTG +
Preference number: 6 (lower is better)
Translates to: ASGKTEPQTPSH*TASGRAWNWDL
Trigger: CAAGTCCCAGTTCCAGGCCCTTCCACTGGCTGTCCAATGGCTTGGAGTCTGAGGCTCAGTTTTCCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS CAA 72 bp CCCAGGCATCTGTGGGCCATTCTCACTGGGATGTTCTaGCTGGGGGAACCATGCAGTGCAGGTGGGTTGTTT +
Preference number: 6 (lower is better)
Translates to: PRHLWAILTGMF*LGEPCSAGGLF
Trigger: AAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGCCCACAGATGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268613.14
ENST00000569455.1
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAAACCCGTCTCTACTGGGACAGGAGAACGCACA +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*KPVSTGTGERT
Trigger: TGTGCGTTCTCCTGTCCCAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS GCA 72 bp GTATGCCTCCGTCCTTGCCTTCAAAACTGGAAAGCATaGTGCCTACTGCTGGGTCCAAGGTCATGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: VCLRPCLQNWKA*CLLLGPRSWAV
Trigger: CACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp CTTGCCTTCAAAACTGGAAAGCATGCTGCCTACTGCTaGGTCCAAGGTCATGGGCTGTGCATCCCATGTGCC +
Preference number: 6 (lower is better)
Translates to: LAFKTGKHAAYC*VQGHGLCIPCA
Trigger: GGCACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp CTCCCACAGCTCCTTCCTCGACTGTGGCTTGAAACGTaGTGTCTGGCACATCCTAAGAAGTGGGTACCTGCT +
Preference number: 6 (lower is better)
Translates to: LPQLLPRLWLET*CLAHPKKWVPA
Trigger: AGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGGAAGGAGCTGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 72 bp TTAGCAGCAGCACCTGTCCAACGTGGTCTCTTGAAGTaGAGCCGCACCTTGTCCTCCCTCTCATGTGCTATA +
Preference number: 6 (lower is better)
Translates to: LAAAPVQRGLLK*SRTLSSLSCAI
Trigger: TATAGCACATGAGAGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGGTGCTGCTGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS GCA 72 bp GTCCTTGCCTTCAAAACTGGAAAGCATGCTGCCTACTaGTGGGTCCAAGGTCATGGGCTGTGCATCCCATGT +
Preference number: 6 (lower is better)
Translates to: VLAFKTGKHAAY*WVQGHGLCIPC
Trigger: ACATGGGATGCACAGCCCATGACCTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 72 bp GCCATTCTCACTGGGATGTTCTTGCTGGGGGAACCATaGAGTGCAGGTGGGTTGTTTGGCCCAGTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: AILTGMFLLGEP*SAGGLFGPVSS
Trigger: TGAAGAAACTGGGCCAAACAACCCACCTGCACTGCATGGTTCCCCCAGCAAGAACATCCCAGTGAGAATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569455.1
CDS CCA 72 bp CCTAAGAAGTGGGTACCTGCTATCCAAAGGCCAGGCTaGAAGGATCAGACAGACACAAAGGATGCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: PKKWVPAIQRPG*KDQTDTKDAKG
Trigger: CCCTTTGGCATCCTTTGTGTCTGTCTGATCCTTCCAGCCTGGCCTTTGGATAGCAGGTACCCACTTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp TGGCTTGAAACGTGGTGTCTGGCACATCCTAAGAAGTaGGTACCTGCTATCCAAAGGCCAGGCTGGAAGGAT +
Preference number: 6 (lower is better)
Translates to: WLETWCLAHPKK*VPAIQRPGWKD
Trigger: ATCCTTCCAGCCTGGCCTTTGGATAGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 72 bp CCTGTCCAACGTGGTCTCTTGAAGTGCAGCCGCACCTaGTCCTCCCTCTCATGTGCTATATACCTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: PVQRGLLKCSRT*SSLSCAIYLKA
Trigger: AGCTTTCAGGTATATAGCACATGAGAGGGAGGACAAGGTGCGGCTGCACTTCAAGAGACCACGTTGGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS CAA 72 bp GACAATAACTCCCACAGCTCCTTCCTCGACTGTGGCTaGAAACGTGGTGTCTGGCACATCCTAAGAAGTGGG +
Preference number: 6 (lower is better)
Translates to: DNNSHSSFLDCG*KRGVWHILRSG
Trigger: CCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGGAAGGAGCTGTGGGAGTTATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp AGCTCCTTCCTCGACTGTGGCTTGAAACGTGGTGTCTaGCACATCCTAAGAAGTGGGTACCTGCTATCCAAA +
Preference number: 6 (lower is better)
Translates to: SSFLDCGLKRGV*HILRSGYLLSK
Trigger: TTTGGATAGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGGAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp AGGTCACACTGTCTGGAATTCCACCAACTCTCCTGCTaGTTATCCTGTGTTGATCAGAGGCTCTGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: RSHCLEFHQLSC*LSCVDQRLWLA
Trigger: TGCCAACCAGAGCCTCTGATCAACACAGGATAACCAGCAGGAGAGTTGGTGGAATTCCAGACAGTGTGACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569454.1
CDS CAA 90 bp CTAAATCAGACAGGATCTCAAGTAGTGCCTTGTATGCCTCCGTCCTaGCCTTCAAAACTGGAAAGCATGCTGCCTACTGCTGGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: LNQTGSQVVPCMPPS*PSKLESMLPTAGSK
Trigger: CTTGGACCCAGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGCATACAAGGCACTACTTGAGATCCTGTCTGATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp GGAGTGCAGTCCAAATCTTCTGCAGATGTTAGCAGCAGCACGAAGTaGGCATCATTCCTTCCTTCTGCAAGTGGGAAAACTGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: GVQSKSSADVSSSTK*ASFLPSASGKTEPQ
Trigger: CTGAGGCTCAGTTTTCCCACTTGCAGAAGGAAGGAATGATGCCAACTTCGTGCTGCTGCTAACATCTGCAGAAGATTTGGACTGCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568770.5
CDS CCA 72 bp GTCGTTTCCCTTACAGTCACTGAAGGTCACACTGTCTaGAATTCCACCAACTCTCCTGCTGGTTATCCTGTG +
Preference number: 6 (lower is better)
Translates to: VVSLTVTEGHTV*NSTNSPAGYPV
Trigger: CACAGGATAACCAGCAGGAGAGTTGGTGGAATTCCAGACAGTGTGACCTTCAGTGACTGTAAGGGAAACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569454.1
CDS CAA 72 bp ACAGGATCTCAAGTAGTGCCTTGTATGCCTCCGTCCTaGCCTTCAAAACTGGAAAGCATGCTGCCTACTGCT +
Preference number: 6 (lower is better)
Translates to: TGSQVVPCMPPS*PSKLESMLPTA
Trigger: AGCAGTAGGCAGCATGCTTTCCAGTTTTGAAGGCAAGGACGGAGGCATACAAGGCACTACTTGAGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp TGTCAAATTGACAATAACTCCCACAGCTCCTTCCTCGACTGTGGCTaGAAACGTGGTGTCTGGCACATCCTAAGAAGTGGGTACCTGCTA +
Preference number: 6 (lower is better)
Translates to: CQIDNNSHSSFLDCG*KRGVWHILRSGYLL
Trigger: TAGCAGGTACCCACTTCTTAGGATGTGCCAGACACCACGTTTCAAGCCACAGTCGAGGAAGGAGCTGTGGGAGTTATTGTCAATTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 72 bp ATAGTCCTGGAAGCAATCTGTTTACCTGGATCCTTTTaGCTTTGTGGTCAGCAAGACTGTTACTATCTCGGG +
Preference number: 6 (lower is better)
Translates to: IVLEAICLPGSF*LCGQQDCYYLG
Trigger: CCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS CAA 72 bp CCTGGAAGCAATCTGTTTACCTGGATCCTTTTGCCTTaGTGGTCAGCAAGACTGTTACTATCTCGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: PGSNLFTWILLP*WSARLLLSRAL
Trigger: TAAAGCCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS CAA 72 bp AATAGTCCTGGAAGCAATCTGTTTACCTGGATCCTTTaGCCTTTGTGGTCAGCAAGACTGTTACTATCTCGG +
Preference number: 6 (lower is better)
Translates to: NSPGSNLFTWIL*PLWSARLLLSR
Trigger: CCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGGACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS TCA 72 bp TCAGACAGACACAAAGGATGCCAAAGGGAATCAAGGTaGGAGATTTGCCAACAAGATTTGCCAAGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: SDRHKGCQRESR*EICQQDLPSFS
Trigger: TGAGAAACTTGGCAAATCTTGTTGGCAAATCTCTCACCTTGATTCCCTTTGGCATCCTTTGTGTCTGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CCA 72 bp GGAAGCAATCTGTTTACCTGGATCCTTTTGCCTTTGTaGTCAGCAAGACTGTTACTATCTCGGGCTTTATTT +
Preference number: 6 (lower is better)
Translates to: GSNLFTWILLPL*SARLLLSRALF
Trigger: AAATAAAGCCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562601.5
CDS CAA 72 bp CAAAATTCTAAATCAGACAGGATCTCAAGTAGTGCCTaGTATGCCTCCGTCCTTGCCTTCAAAACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: QNSKSDRISSSA*YASVLAFKTGK
Trigger: CTTTCCAGTTTTGAAGGCAAGGACGGAGGCATACAAGGCACTACTTGAGATCCTGTCTGATTTAGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 72 bp ACACAAAGGATGCCAAAGGGAATCAAGGTGAGAGATTaGCCAACAAGATTTGCCAAGTTTCTCATCACTCAG +
Preference number: 6 (lower is better)
Translates to: TQRMPKGIKVRD*PTRFAKFLITQ
Trigger: CTGAGTGATGAGAAACTTGGCAAATCTTGTTGGCAAATCTCTCACCTTGATTCCCTTTGGCATCCTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp ATCAGACAGACACAAAGGATGCCAAAGGGAATCAAGGTGAGAGATTaGCCAACAAGATTTGCCAAGTTTCTCATCACTCAGTGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: IRQTQRMPKGIKVRD*PTRFAKFLITQCVQ
Trigger: TTGAACACACTGAGTGATGAGAAACTTGGCAAATCTTGTTGGCAAATCTCTCACCTTGATTCCCTTTGGCATCCTTTGTGTCTGTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS GCA 72 bp AAAGGGAATCAAGGTGAGAGATTTGCCAACAAGATTTaGCAAGTTTCTCATCACTCAGTGTGTTCAACAACA +
Preference number: 6 (lower is better)
Translates to: KGNQGERFANKI*QVSHHSVCSTT
Trigger: TGTTGTTGAACACACTGAGTGATGAGAAACTTGGCAAATCTTGTTGGCAAATCTCTCACCTTGATTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562307.1
CDS CAA 90 bp AATAATAGTCCTGGAAGCAATCTGTTTACCTGGATCCTTTTGCCTTaGTGGTCAGCAAGACTGTTACTATCTCGGGCTTTATTTTTGATA +
Preference number: 6 (lower is better)
Translates to: NNSPGSNLFTWILLP*WSARLLLSRALFLI
Trigger: TATCAAAAATAAAGCCCGAGATAGTAACAGTCTTGCTGACCACAAAGGCAAAAGGATCCAGGTAAACAGATTGCTTCCAGGACTATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562601.5