RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH12 (Homo sapiens)

Ensembl gene IDs: ENSG00000154162

Ensembl transcript IDs: ENST00000382254.6, ENST00000504376.6, ENST00000517378.1, ENST00000518209.1, ENST00000520668.1, ENST00000521384.5, ENST00000521745.1, ENST00000522262.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGAACACTCTTCCACCGTaGTGCCACATAGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLNTLPP*CHIAIF
Trigger: GAAGATAGCTATGTGGCATCACGGTGGAAGAGTGTT...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR TCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGGTCAGTAAATTGTATTaGATAGGCCTGAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLVSKLY*IGLSLS
Trigger: AGACAAGCTCAGGCCTATTCAATACAATTTACTGAC...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR CAA 90 bp AGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTaGTTTTATGTCTTTATCTCTGAATCCCGCAATACCATCACAGCA +
Preference number: 2 (lower is better)
Translates to: RVRVSLLLLDIKTVS*FYVFISESRNTITA
Trigger: TGCTGTGATGGTATTGCGGGATTCAGAGATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR TCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGGTGTGTGTGTGTGTGTaGGAGAGATTTCTATTAATA +
Preference number: 2 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLVCVCV*ERFLLI
Trigger: TATTAATAGAAATCTCTCTCACACACACACACACAC...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR TCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGGTCAGTAAATTGTATTaGATAGGCCTGAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKVSKLY*IGLSLS
Trigger: AGACAAGCTCAGGCCTATTCAATACAATTTACTGAC...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR TCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCTTATGTCTTTATCTCTaGATCCCGCAATACCATCAC +
Preference number: 2 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSLCLYL*IPQYHH
Trigger: GTGATGGTATTGCGGGATTCAGAGATAAAGACATAA...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR CAA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLNLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVNLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
3UTR-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFINLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR CAA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGTAATCAAAGGAATCTaGTCCCAGAGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSVIKGI*SQSVCV
Trigger: CACACACACACTCTGGGACAAGATTCCTTTGATTAC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR-3UTR CAA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGTCAGAGTGTCGCTATaGCTTCTTGACATAAAGACG +
Preference number: 3 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSVRVSL*LLDIKT
Trigger: CGTCTTTATGTCAAGAAGCAATAGCGACACTCTGAC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR TCA 72 bp CATAAAGACGGTGTCTTTGTTTTATGTCTTTATCTCTaGATCCCGCAATACCATCACAGCAGAGTGTACTGT +
Preference number: 3 (lower is better)
Translates to: HKDGVFVLCLYL*IPQYHHSRVYC
Trigger: ACAGTACACTCTGCTGTGATGGTATTGCGGGATTCAGAGATAAAGACATAAAACAAAGACACCGTCTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR TCA 72 bp GATCAGAAAGTGTTCTTCTTTTGTTCTCAAAAGGAATaGGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACA +
Preference number: 3 (lower is better)
Translates to: DQKVFFFCSQKE*GESECRYCFLT
Trigger: TGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAGAAGAACACTTTCTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR TCA 72 bp ATCTTCGTTCTAGGTTGTCATGTCAGTAAATTGTATTaGATAGGCCTGAGCTTGTCTCAGTGTGATTGTGAA +
Preference number: 3 (lower is better)
Translates to: IFVLGCHVSKLY*IGLSLSQCDCE
Trigger: TTCACAATCACACTGAGACAAGCTCAGGCCTATTCAATACAATTTACTGACATGACAACCTAGAACGAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR TCA 72 bp AGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTaGCATAAAGACGGTGTCTTTGTTTTATGTCTTTAT +
Preference number: 3 (lower is better)
Translates to: RNEESQSVAIAS*HKDGVFVLCLY
Trigger: ATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTACGGCCGCAGCAGGGTaGCAACAGCTCAGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCTAAAG*QQLSLA
Trigger: CGCAAGGCTGAGCTGTTGGCACCCTGCTGCGGCCGT...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTACGGCCGCAGCAGGGTaGCAACAGCTCAGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCTAAAG*QQLSLA
Trigger: CGCAAGGCTGAGCTGTTGGCACCCTGCTGCGGCCGT...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGAGAGCTGAGGGACTCTaGCACGGACCCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLRAEGL*HGPTPF
Trigger: GAAGGGAGTGGGTCCGTGGCAGAGTCCCTCAGCTCT...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTAGAGCTGAGGGACTCTaGCACGGACCCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCRAEGL*HGPTPF
Trigger: GAAGGGAGTGGGTCCGTGGCAGAGTCCCTCAGCTCT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTAGAGCTGAGGGACTCTaGCACGGACCCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISRAEGL*HGPTPF
Trigger: GAAGGGAGTGGGTCCGTGGCAGAGTCCCTCAGCTCT...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGAGCTTTCCCACATACTaGGGCTCGGAGCCCACGTAT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLSFPTY*GSEPTY
Trigger: ATACGTGGGCTCCGAGCCTCAGTATGTGGGAAAGCT...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGGCATATGTGGCCAGTaGATCGTATGGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLGICGQ*IVWWGS
Trigger: ACTGCCCCACCATACGATTCACTGGCCACATATGCC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCCAACAGCTCAGCCTTaGGCGGAAGGTGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISPTAQP*AEGETL
Trigger: AAGGGTCTCACCTTCCGCGCAAGGCTGAGCTGTTGG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGGCCTTGCGCGGAAGGTaGGACCCTTCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVALRGR*DPSLLF
Trigger: AAACAGAAGAGAAGGGTCTCACCTTCCGCGCAAGGC...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCCTTGCGCGGAAGGTaGGACCCTTCTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCALRGR*DPSLLF
Trigger: AAACAGAAGAGAAGGGTCTCACCTTCCGCGCAAGGC...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTAGCTTTCCCACATACTaGGGCTCGGAGCCCACGTAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSFPTY*GSEPTY
Trigger: ATACGTGGGCTCCGAGCCTCAGTATGTGGGAAAGCT...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCCTACATCCAGGTCTTaGGCAGTGACAGCGCCAATG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCPTSRS*AVTAPM
Trigger: CATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCCTACATCCAGGTCTTaGGCAGTGACAGCGCCAATG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCPTSRS*AVTAPM
Trigger: CATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTTGTTGCCCAGCAGGTaGAAGATCTCGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLLPSR*KISVCS
Trigger: GCTGCAGACCGAGATCTTTCACCTGCTGGGCAACAA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGGCATATGTGGCCAGTaGATCGTATGGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVGICGQ*IVWWGS
Trigger: ACTGCCCCACCATACGATTCACTGGCCACATATGCC...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCTTCTCAGAAAAGCCTaGACCCCTCTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCLLRKA*TPLCGS
Trigger: GGAGCCACAGAGAGGGGTCCAGGCTTTTCTGAGAAG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGCTTGCTGAAAACCGGTaGCTCATCTACGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLLAENR*LIYVQH
Trigger: GTGCTGGACGTAGATGAGCCACCGGTTTTCAGCAAG...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCCGATGTCGAAAGCCTaGGTATCTTCCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCPMSKA*VSSSPP
Trigger: AGGTGGGGAGGAAGATACCCAGGCTTTCGACATCGG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCCGATGTCGAAAGCCTaGGTATCTTCCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVPMSKA*VSSSPP
Trigger: AGGTGGGGAGGAAGATACCCAGGCTTTCGACATCGG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTTGTAGAGCGGCTTGCTaGAAACCGGTGGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCCRAAC*KPVAHL
Trigger: TAGATGAGCCACCGGTTTTCAGCAAGCCGCTCTACA...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTAGAGCGGCTTGCTaGAAACCGGTGGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVCRAAC*KPVAHL
Trigger: TAGATGAGCCACCGGTTTTCAGCAAGCCGCTCTACA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACCCTACATCCAGGTCTTaGGCAGTGACAGCGCCAATG +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDPTSRS*AVTAPM
Trigger: CATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGG...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTTCCATGGGTGGTCTCTaGCGAGGTAAACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCSMGGL*RGKQRE
Trigger: CTCTCTCTGTTTACCTCGTCAGAGACCACCCATGGA...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATAGGTCGGGTCATCTaGATCTGTGGCCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISIGRVI*ICGLDL
Trigger: CAGGTCAAGGCCACAGATGCAGATGACCCGACCTAT...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTATAGGTCGGGTCATCTaGATCTGTGGCCTTGACCTG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCIGRVI*ICGLDL
Trigger: CAGGTCAAGGCCACAGATGCAGATGACCCGACCTAT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTCATTGTGTTTGTGCTaGTCTGGACAGGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLSLCLC*SGQGSC
Trigger: GCAGCTACCCTGTCCAGAGCAGCACAAACACAATGA...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTGGTTTGAGGTGTCTGTaGCCTCCACCACTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISGLRCL*PPPLSF
Trigger: GAAGCTAAGTGGTGGAGGCCACAGACACCTCAAACC...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCTTGCTGAAAACCGGTaGCTCATCTACGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCLAENR*LIYVQH
Trigger: GTGCTGGACGTAGATGAGCCACCGGTTTTCAGCAAG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACCCGATGTCGAAAGCCTaGGTATCTTCCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDPMSKA*VSSSPP
Trigger: AGGTGGGGAGGAAGATACCCAGGCTTTCGACATCGG...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTAACACGTTGGAAATGTaGCCGTTGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISNTLEM*PLSWQM
Trigger: CATCTGCCAGGACAACGGTCACATTTCCAACGTGTT...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTAACACGTTGGAAATGTaGCCGTTGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCNTLEM*PLSWQM
Trigger: CATCTGCCAGGACAACGGTCACATTTCCAACGTGTT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACTGTAGAGCGGCTTGCTaGAAACCGGTGGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDCRAAC*KPVAHL
Trigger: TAGATGAGCCACCGGTTTTCAGCAAGCCGCTCTACA...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACTCCATGGGTGGTCTCTaGCGAGGTAAACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDSMGGL*RGKQRE
Trigger: CTCTCTCTGTTTACCTCGTCAGAGACCACCCATGGA...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTCATTGTGTTTGTGCTaGTCTGGACAGGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVSLCLC*SGQGSC
Trigger: GCAGCTACCCTGTCCAGAGCAGCACAAACACAATGA...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTCATTGTGTTTGTGCTaGTCTGGACAGGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSLCLC*SGQGSC
Trigger: GCAGCTACCCTGTCCAGAGCAGCACAAACACAATGA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTCTGTGGCCTTGACCTaGAGTACATATGCACCCACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSVALT*STYAPT
Trigger: TGTGGGTGCATATGTACTCCAGGTCAAGGCCACAGA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTCTGTGGCCTTGACCTaGAGTACATATGCACCCACA +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCSVALT*STYAPT
Trigger: TGTGGGTGCATATGTACTCCAGGTCAAGGCCACAGA...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTTATCTGTCCTGGCTTaGCATTTTCACACACGGCTG +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLLSVLA*HFHTRL
Trigger: CAGCCGTGTGTGAAAATGCCAAGCCAGGACAGATAA...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGTATGGTGGGGCAGTTaGATCCACATCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLVWWGS*IHIIFL
Trigger: CAGGAAAATGATGTGGATCCAACTGCCCCACCATAC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACAACACGTTGGAAATGTaGCCGTTGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDNTLEM*PLSWQM
Trigger: CATCTGCCAGGACAACGGTCACATTTCCAACGTGTT...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGCAGCACTGACTATCTaGATTATCTGTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVAALTI*IICPGL
Trigger: CAAGCCAGGACAGATAATTCAGATAGTCAGTGCTGC...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGGCAGCACTGACTATCTaGATTATCTGTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVAALTI*IICPGL
Trigger: CAAGCCAGGACAGATAATTCAGATAGTCAGTGCTGC...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCTCGGTCTGCAGCACTaGCTATCTGAATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLGLQH*LSELSV
Trigger: GACAGATAATTCAGATAGTCAGTGCTGCAGACCGAG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTCGGTCTGCAGCACTaGCTATCTGAATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLGLQH*LSELSV
Trigger: GACAGATAATTCAGATAGTCAGTGCTGCAGACCGAG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCTCGGTCTGCAGCACTaGCTATCTGAATTATCTGTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISLGLQH*LSELSV
Trigger: GACAGATAATTCAGATAGTCAGTGCTGCAGACCGAG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTCCATGGGTGGTCTCTaGCGAGGTAAACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKSMGGL*RGKQRE
Trigger: CTCTCTCTGTTTACCTCGTCAGAGACCACCCATGGA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTAACACTCTTCCACCGTaGTGCCACATAGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCNTLPP*CHIAIF
Trigger: GAAGATAGCTATGTGGCATCACGGTGGAAGAGTGTT...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTCTGTGGCTAAAGTCTaGTGTGGCTGTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSVAKV*CGCGCS
Trigger: ACTACAACCACAGCCACAGCAGACTTTAGCCACAGA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTCTGTGGCTAAAGTCTaGTGTGGCTGTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVSVAKV*CGCGCS
Trigger: ACTACAACCACAGCCACAGCAGACTTTAGCCACAGA...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTCTGTGGCTAAAGTCTaGTGTGGCTGTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCSVAKV*CGCGCS
Trigger: ACTACAACCACAGCCACAGCAGACTTTAGCCACAGA...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTACAACTCTTGCTGCCTaGGGCTGTATCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCTTLAA*GCIHFF
Trigger: GAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGT...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGACAACTCTTGCTGCCTaGGGCTGTATCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVTTLAA*GCIHFF
Trigger: GAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGT...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGAGGAAATACAACTCTTaGTGCCTGCGGCTGTATCCA +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLRKYNS*CLRLYP
Trigger: TGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCT...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTAGGAAATACAACTCTTaGTGCCTGCGGCTGTATCCA +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCRKYNS*CLRLYP
Trigger: TGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCT...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTCGCCAAACATGTCTaGCAAGACTTTAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCFAKHV*QDFKAG
Trigger: CCCCGCTTTAAAGTCTTGGCAGACATGTTTGGCGAA...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGCCACGTTTAACACGTTaGAAATGTGACCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLPRLTR*KCDRCP
Trigger: AGGACAACGGTCACATTTCCAACGTGTTAAACGTGG...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGCTTGCTGAAAACCGGTaGCTCATCTACGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKLAENR*LIYVQH
Trigger: GTGCTGGACGTAGATGAGCCACCGGTTTTCAGCAAG...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCACGGCTGTCTCATATaGCACAGATATTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVHGCLI*HRYFWR
Trigger: CCTCCAGAAATATCTGTGCCATATGAGACAGCCGTG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCACGGCTGTCTCATATaGCACAGATATTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCHGCLI*HRYFWR
Trigger: CCTCCAGAAATATCTGTGCCATATGAGACAGCCGTG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTCACGGCTGTCTCATATaGCACAGATATTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCHGCLI*HRYFWR
Trigger: CCTCCAGAAATATCTGTGCCATATGAGACAGCCGTG...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTTATCTGTCCTGGCTTaGCATTTTCACACACGGCTG +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLSVLA*HFHTRL
Trigger: CAGCCGTGTGTGAAAATGCCAAGCCAGGACAGATAA...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTTATCTGTCCTGGCTTaGCATTTTCACACACGGCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISLSVLA*HFHTRL
Trigger: CAGCCGTGTGTGAAAATGCCAAGCCAGGACAGATAA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGCATTACAAGACAGGATaGTGCCATCAGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLHYKTG*CHQSHI
Trigger: GATGTGACTCTGATGGCACCATCCTGTCTTGTAATG...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGCTCCTCAATCACTTTTaGGTTTCTCAGAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLLLNHF*VSQSPD
Trigger: ATCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAG...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCTCCTCAATCACTTTTaGGTTTCTCAGAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCLLNHF*VSQSPD
Trigger: ATCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTGTGTTATCTTCCATaGGTGGTCTCTGACGAGGTA +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLCYLP*VVSDEV
Trigger: TACCTCGTCAGAGACCACCCATGGAAGATAACACAG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGGTATGGTGGGGCAGTTaGATCCACATCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVVWWGS*IHIIFL
Trigger: CAGGAAAATGATGTGGATCCAACTGCCCCACCATAC...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCTTCGTAGGCATATGTaGCCAGTGAATCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCLRRHM*PVNRMV
Trigger: CACCATACGATTCACTGGCCACATATGCCTACGAAG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCAGCTTTCCCACATACTaGGGCTCGGAGCCCACGTAT +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFISFPTY*GSEPTY
Trigger: ATACGTGGGCTCCGAGCCTCAGTATGTGGGAAAGCT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTTGTTGCCCAGCAGGTaGAAGATCTCGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILLPSR*KISVCS
Trigger: GCTGCAGACCGAGATCTTTCACCTGCTGGGCAACAA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCTTGTTGCCCAGCAGGTaGAAGATCTCGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFILLPSR*KISVCS
Trigger: GCTGCAGACCGAGATCTTTCACCTGCTGGGCAACAA...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCGGCATATGTGGCCAGTaGATCGTATGGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIGICGQ*IVWWGS
Trigger: ACTGCCCCACCATACGATTCACTGGCCACATATGCC...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACAACACTCTTCCACCGTaGTGCCACATAGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDNTLPP*CHIAIF
Trigger: GAAGATAGCTATGTGGCATCACGGTGGAAGAGTGTT...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTTTTAAAACTCCCAACTaGTCCTGGGTTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCFKTPN*SWVPAC
Trigger: ACAAGCTGGAACCCAGGAGCAGTTGGGAGTTTTAAA...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTAAAACTCCCAACTaGTCCTGGGTTCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLFKTPN*SWVPAC
Trigger: ACAAGCTGGAACCCAGGAGCAGTTGGGAGTTTTAAA...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGCTTTCAAGTGGAAGATaGTTTTGGGGAATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLLSSGR*FWGIEV
Trigger: CACCTCGATTCCCCAAAAGCATCTTCCACTTGAAAG...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCTTTCAAGTGGAAGATaGTTTTGGGGAATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCLSSGR*FWGIEV
Trigger: CACCTCGATTCCCCAAAAGCATCTTCCACTTGAAAG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTTCTGGACAGGGTAGCTaGTGTCTTCTATTACAACAG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCSGQGS*CLLLQQ
Trigger: CTGTTGTAATAGAAGACAGCAGCTACCCTGTCCAGA...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTCTGGACAGGGTAGCTaGTGTCTTCTATTACAACAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSGQGS*CLLLQQ
Trigger: CTGTTGTAATAGAAGACAGCAGCTACCCTGTCCAGA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTCTGGACAGGGTAGCTaGTGTCTTCTATTACAACAG +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVSGQGS*CLLLQQ
Trigger: CTGTTGTAATAGAAGACAGCAGCTACCCTGTCCAGA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTACAAGACAGGATGGTaGCATCAGAGTCACATCTAC +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVYKTGW*HQSHIY
Trigger: GTAGATGTGACTCTGATGGCACCATCCTGTCTTGTA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTACAAGACAGGATGGTaGCATCAGAGTCACATCTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISYKTGW*HQSHIY
Trigger: GTAGATGTGACTCTGATGGCACCATCCTGTCTTGTA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCTTCTCAGAAAAGCCTaGACCCCTCTCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILLRKA*TPLCGS
Trigger: GGAGCCACAGAGAGGGGTCCAGGCTTTTCTGAGAAG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACACTCCCAACTGCTCCTaGGTTCCAGCTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDTPNCS*VPACLY
Trigger: ATATAGACAAGCTGGAACCCAGGAGCAGTTGGGAGT...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTGTTCCTTGTAAGCATTaGCAAAGGCTTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISVPCKH*QRLSYS
Trigger: GCTGTAGGAAAGCCTTTGCCAATGCTTACAAGGAAC...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTCGTTGTCCTGGCAGATaGATAACATTTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCRCPGR*ITFSLG
Trigger: GCCAAGAGAAAATGTTATCCATCTGCCAGGACAACG...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCGTTGTCCTGGCAGATaGATAACATTTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVRCPGR*ITFSLG
Trigger: GCCAAGAGAAAATGTTATCCATCTGCCAGGACAACG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCCACGTTTAACACGTTaGAAATGTGACCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCPRLTR*KCDRCP
Trigger: AGGACAACGGTCACATTTCCAACGTGTTAAACGTGG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTCCACGTTTAACACGTTaGAAATGTGACCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCPRLTR*KCDRCP
Trigger: AGGACAACGGTCACATTTCCAACGTGTTAAACGTGG...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACCTGTGTTATCTTCCATaGGTGGTCTCTGACGAGGTA +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDLCYLP*VVSDEV
Trigger: TACCTCGTCAGAGACCACCCATGGAAGATAACACAG...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTATTCTTCCAATAGCTaGACCAATAGGGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISYSSNS*TNRGRL
Trigger: GAGTCTTCCCCTATTGGTTCAGCTATTGGAAGAATA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTATTCTTCCAATAGCTaGACCAATAGGGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVYSSNS*TNRGRL
Trigger: GAGTCTTCCCCTATTGGTTCAGCTATTGGAAGAATA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTTGGAAGCCTCAACTTTaGAAGTGTATGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCWKPQL*KCMPSL
Trigger: CAAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCA...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGGAAGCCTCAACTTTaGAAGTGTATGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVWKPQL*KCMPSL
Trigger: CAAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTGGAAGCCTCAACTTTaGAAGTGTATGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCWKPQL*KCMPSL
Trigger: CAAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCA...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGTAGCCTTTGATGAATaGAATCCCTTATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLVAFDE*NPLCLC
Trigger: ACACAGACATAAGGGATTTCATTCATCAAAGGCTAC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCACGACTCCCTTAAGTaGCTTTATCAGGGTTATAAC +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCHDSLK*LYQGYN
Trigger: GTTATAACCCTGATAAAGTCACTTAAGGGAGTCGTG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCACGACTCCCTTAAGTaGCTTTATCAGGGTTATAAC +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVHDSLK*LYQGYN
Trigger: GTTATAACCCTGATAAAGTCACTTAAGGGAGTCGTG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCACGACTCCCTTAAGTaGCTTTATCAGGGTTATAAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISHDSLK*LYQGYN
Trigger: GTTATAACCCTGATAAAGTCACTTAAGGGAGTCGTG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGGTCGCTATTGCTTCTTaGCATAAAGACGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLVAIAS*HKDGVF
Trigger: AAAGACACCGTCTTTATGTCAAGAAGCAATAGCGAC...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTGTCGCTATTGCTTCTTaGCATAAAGACGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISVAIAS*HKDGVF
Trigger: AAAGACACCGTCTTTATGTCAAGAAGCAATAGCGAC...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGCCAACACACTGCTTTaGATTTTGTCCGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLANTLL*ILSVFI
Trigger: AATGAAAACGGACAAAATGCAAAGCAGTGTGTTGGC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTACTGTGCCAACACACTaGTTTGCATTTTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISTVPTH*FAFCPF
Trigger: AAACGGACAAAATGCAAAGCAGTGTGTTGGCACAGT...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGAAATACAACTCTTGCTaGCTGCGGCTGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVKYNSC*LRLYPF
Trigger: AAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTT...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTAAATACAACTCTTGCTaGCTGCGGCTGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCKYNSC*LRLYPF
Trigger: AAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACTACAAGACAGGATGGTaGCATCAGAGTCACATCTAC +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDYKTGW*HQSHIY
Trigger: GTAGATGTGACTCTGATGGCACCATCCTGTCTTGTA...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCTTCTGCCTTCGCAGTaGTACATACAGTACAACTAT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLLPSQ*YIQYNY
Trigger: ATAGTTGTACTGTATGTAGCACTGCGAAGGCAGAAG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTTCGCCAAACATGTCTaGCAAGACTTTAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKFAKHV*QDFKAG
Trigger: CCCCGCTTTAAAGTCTTGGCAGACATGTTTGGCGAA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGACTCCCAACTGCTCCTaGGTTCCAGCTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKTPNCS*VPACLY
Trigger: ATATAGACAAGCTGGAACCCAGGAGCAGTTGGGAGT...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACCATTACAAGACAGGATaGTGCCATCAGAGTCACATC +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDHYKTG*CHQSHI
Trigger: GATGTGACTCTGATGGCACCATCCTGTCTTGTAATG...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGCTTCGTAGGCATATGTaGCCAGTGAATCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKLRRHM*PVNRMV
Trigger: CACCATACGATTCACTGGCCACATATGCCTACGAAG...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
3UTR CAA 72 bp AATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTaGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATT +
Preference number: 4 (lower is better)
Translates to: NLVPECVCVCVC*CVCVCVREISI
Trigger: AATAGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACACTCTGGGACAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGCTTGGATGAGTACTTaGTATTGTTCTTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLAWMST*YCSLTS
Trigger: AGAAGTCAAAGAACAATATCAAGTACTCATCCAAGC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTATCCTCATCTGTaGCGATGTCAAACAAATTTC +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCVYPHL*RCQTNF
Trigger: GAAATTTGTTTGACATCGTCACAGATGAGGATACAC...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGTCAGTAAATTGTATTaGATAGGCCTGAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVVSKLY*IGLSLS
Trigger: AGACAAGCTCAGGCCTATTCAATACAATTTACTGAC...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTATGTCTTTATCTCTaGATCCCGCAATACCATCAC +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLLCLYL*IPQYHH
Trigger: GTGATGGTATTGCGGGATTCAGAGATAAAGACATAA...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCTTAACGTAGAATTGTaGAATCCAGGTTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCLCVCVCVREISLNVEL*NPGLRC
Trigger: ACACCTCAAACCTGGATTCCACAATTCTACGTTAAG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTTAACGTAGAATTGTaGAATCCAGGTTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLNVEL*NPGLRC
Trigger: ACACCTCAAACCTGGATTCCACAATTCTACGTTAAG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCTTAACGTAGAATTGTaGAATCCAGGTTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLNVEL*NPGLRC
Trigger: ACACCTCAAACCTGGATTCCACAATTCTACGTTAAG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTCAGGAACTTTCAAGTaGAAGATGCTTTTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCSGTFK*KMLLGN
Trigger: ATTCCCCAAAAGCATCTTCCACTTGAAAGTTCCTGA...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGCTTTACTCGCAATTATaGAGAAATTATACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLLYSQL*RNYTAQ
Trigger: CTGCGCAGTATAATTTCTCCATAATTGCGAGTAAAG...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTACGAACTGTAAAATTTaGTTTGATAGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCTNCKI*FDSSLR
Trigger: CCTGAGGCTGCTATCAAACCAAATTTTACAGTTCGT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGGCTTGGATGAGTACTTaGTATTGTTCTTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVAWMST*YCSLTS
Trigger: AGAAGTCAAAGAACAATATCAAGTACTCATCCAAGC...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACGTGTATCCTCATCTGTaGCGATGTCAAACAAATTTC +
Preference number: 4 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDVYPHL*RCQTNF
Trigger: GAAATTTGTTTGACATCGTCACAGATGAGGATACAC...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTGCAGCACTGACTATCTaGATTATCTGTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINIAALTI*IICPGL
Trigger: CAAGCCAGGACAGATAATTCAGATAGTCAGTGCTGC...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTaGGAGAGATTTCTATTAATA +
Preference number: 4 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCVCVCV*ERFLLI
Trigger: TATTAATAGAAATCTCTCTCACACACACACACACAC...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTGTTCTCAAAAGGAATaGGGAGAGTCAGAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINICSQKE*GESECR
Trigger: GCGACACTCTGACTCTCCTCATTCCTTTTGAGAACA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCTGTTCTCAAAAGGAATaGGGAGAGTCAGAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSCSQKE*GESECR
Trigger: GCGACACTCTGACTCTCCTCATTCCTTTTGAGAACA...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGAATTATACTGCGCAGTaGTTTCTCTGTCTAGTAATT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLNYTAQ*FLCLVI
Trigger: AATTACTAGACAGAGAAAGCACTGCGCAGTATAATT...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTACAACTCTTGCTGCCTaGGGCTGTATCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINITTLAA*GCIHFF
Trigger: GAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGT...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCAGGAAATACAACTCTTaGTGCCTGCGGCTGTATCCA +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIRKYNS*CLRLYP
Trigger: TGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTGGTTTTATATCCCTaGGAATTTTGTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLVLYP*EFCSPQ
Trigger: TTGAGGAGAACAAAATTCGCAGGGATATAAAACCAG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTTCGCCAAACATGTCTaGCAAGACTTTAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINIFAKHV*QDFKAG
Trigger: CCCCGCTTTAAAGTCTTGGCAGACATGTTTGGCGAA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGATTTCCCCCATCTCCTaGAACAATATTGTATTCAAT +
Preference number: 4 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLISPIS*NNIVFN
Trigger: ATTGAATACAATATTGTTCCAGGAGATGGGGGAAAT...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTCTTTACTCGCAATTATaGAGAAATTATACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCLYSQL*RNYTAQ
Trigger: CTGCGCAGTATAATTTCTCCATAATTGCGAGTAAAG...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCCTCCTCAATCACTTTTaGGTTTCTCAGAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSLLNHF*VSQSPD
Trigger: ATCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAG...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCTGTGTTATCTTCCATaGGTGGTCTCTGACGAGGTA +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILCYLP*VVSDEV
Trigger: TACCTCGTCAGAGACCACCCATGGAAGATAACACAG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTGTATGGTGGGGCAGTTaGATCCACATCATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINIVWWGS*IHIIFL
Trigger: CAGGAAAATGATGTGGATCCAACTGCCCCACCATAC...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCCTTCGTAGGCATATGTaGCCAGTGAATCGTATGGTG +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFILRRHM*PVNRMV
Trigger: CACCATACGATTCACTGGCCACATATGCCTACGAAG...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTTATGTCTTTATCTCTaGATCCCGCAATACCATCAC +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKLCLYL*IPQYHH
Trigger: GTGATGGTATTGCGGGATTCAGAGATAAAGACATAA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTAATTATACTGCGCAGTaGTTTCTCTGTCTAGTAATT +
Preference number: 4 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCNYTAQ*FLCLVI
Trigger: AATTACTAGACAGAGAAAGCACTGCGCAGTATAATT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCGTTCCTTGTAAGCATTaGCAAAGGCTTTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIVPCKH*QRLSYS
Trigger: GCTGTAGGAAAGCCTTTGCCAATGCTTACAAGGAAC...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCGTTGTCCTGGCAGATaGATAACATTTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINIRCPGR*ITFSLG
Trigger: GCCAAGAGAAAATGTTATCCATCTGCCAGGACAACG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTCAGGAACTTTCAAGTaGAAGATGCTTTTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKSGTFK*KMLLGN
Trigger: ATTCCCCAAAAGCATCTTCCACTTGAAAGTTCCTGA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGATTTCCCCCATCTCCTaGAACAATATTGTATTCAAT +
Preference number: 4 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVISPIS*NNIVFN
Trigger: ATTGAATACAATATTGTTCCAGGAGATGGGGGAAAT...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGATTTCCCCCATCTCCTaGAACAATATTGTATTCAAT +
Preference number: 4 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLISPIS*NNIVFN
Trigger: ATTGAATACAATATTGTTCCAGGAGATGGGGGAAAT...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCTATTCTTCCAATAGCTaGACCAATAGGGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSYSSNS*TNRGRL
Trigger: GAGTCTTCCCCTATTGGTTCAGCTATTGGAAGAATA...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCACTGTGCCAACACACTaGTTTGCATTTTGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFITVPTH*FAFCPF
Trigger: AAACGGACAAAATGCAAAGCAGTGTGTTGGCACAGT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCAAATACAACTCTTGCTaGCTGCGGCTGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSKYNSC*LRLYPF
Trigger: AAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTT...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCTTCTGCCTTCGCAGTaGTACATACAGTACAACTAT +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILLPSQ*YIQYNY
Trigger: ATAGTTGTACTGTATGTAGCACTGCGAAGGCAGAAG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
3UTR CAA 72 bp TTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATaGCTTCTTGACATAAAGACGGTGTCTTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FSKGMRRVRVSL*LLDIKTVSLFY
Trigger: ATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTGTGTATCCTCATCTGTaGCGATGTCAAACAAATTTC +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINIVYPHL*RCQTNF
Trigger: GAAATTTGTTTGACATCGTCACAGATGAGGATACAC...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR TCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGTAGCCTTTGATGAATaGAATCCCTTATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSVAFDE*NPLCLC
Trigger: ACACAGACATAAGGGATTTCATTCATCAAAGGCTAC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGTCAGTAAATTGTATTaGATAGGCCTGAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSVSKLY*IGLSLS
Trigger: AGACAAGCTCAGGCCTATTCAATACAATTTACTGAC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGCCAACACACTGCTTTaGATTTTGTCCGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSANTLL*ILSVFI
Trigger: AATGAAAACGGACAAAATGCAAAGCAGTGTGTTGGC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTCAGGAACTTTCAAGTaGAAGATGCTTTTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINISGTFK*KMLLGN
Trigger: ATTCCCCAAAAGCATCTTCCACTTGAAAGTTCCTGA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCACGAACTGTAAAATTTaGTTTGATAGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSTNCKI*FDSSLR
Trigger: CCTGAGGCTGCTATCAAACCAAATTTTACAGTTCGT...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCACGAACTGTAAAATTTaGTTTGATAGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFITNCKI*FDSSLR
Trigger: CCTGAGGCTGCTATCAAACCAAATTTTACAGTTCGT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR TCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCGCTTGGATGAGTACTTaGTATTGTTCTTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIAWMST*YCSLTS
Trigger: AGAAGTCAAAGAACAATATCAAGTACTCATCCAAGC...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR GCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCTGGTTTTATATCCCTaGGAATTTTGTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILVLYP*EFCSPQ
Trigger: TTGAGGAGAACAAAATTCGCAGGGATATAAAACCAG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CCA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCTTTACTCGCAATTATaGAGAAATTATACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VCVCLCVCVCVREISINILYSQL*RNYTAQ
Trigger: CTGCGCAGTATAATTTCTCCATAATTGCGAGTAAAG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR GCA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCAATTATACTGCGCAGTaGTTTCTCTGTCTAGTAATT +
Preference number: 4 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFINYTAQ*FLCLVI
Trigger: AATTACTAGACAGAGAAAGCACTGCGCAGTATAATT...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 90 bp AGCAGCAGCACCGACGGCCGCAGCAGGGTGCCAACAGCTCAGCCTTaGGCGGAAGGTGAGACCCTTCTCTTCTGTTTCCCCTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: SSSTDGRSRVPTAQP*AEGETLLFCFPFPN
Trigger: ATTTGGAAAGGGGAAACAGAAGAGAAGGGTCTCACCTTCCGCGCAAGGCTGAGCTGTTGGCACCCTGCTGCGGCCGTCGGTGCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 90 bp AGAGCCAAGCTGTTAGGTAACAAAGCTGATGGCAGAAAAGGCAGCTaGAGGAGCAGCAGCACCGACGGCCGCAGCAGGGTGCCAACAGCT +
Preference number: 5 (lower is better)
Translates to: RAKLLGNKADGRKGS*RSSSTDGRSRVPTA
Trigger: AGCTGTTGGCACCCTGCTGCGGCCGTCGGTGCTGCTGCTCCTGCAGCTGCCTTTTCTGCCATCAGCTTTGTTACCTAACAGCTTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS CCA 90 bp GTCTTCATAAACCTCCATGGTGTAGAGCGGCTTGCTGAAAACCGGTaGCTCATCTACGTCCAGCACGCTGATCTTCACCGTAGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: VFINLHGVERLAENR*LIYVQHADLHRSCV
Trigger: GACACAGCTACGGTGAAGATCAGCGTGCTGGACGTAGATGAGCCACCGGTTTTCAGCAAGCCGCTCTACACCATGGAGGTTTATGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS TCA 90 bp CAATCTATGAAGTACCTAACAGCACTGCTGCCTACATCCAGGTCTTaGGCAGTGACAGCGCCAATGATGGTCCCTACCGGAGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: QSMKYLTALLPTSRS*AVTAPMMVPTGVSS
Trigger: TGAAGACACTCCGGTAGGGACCATCATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGCAGCAGTGCTGTTAGGTACTTCATAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS-3UTR CAA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGCCTACATCCAGGTCTaGAGCAGTGACAGCGCCAAT +
Preference number: 5 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLAYIQV*SSDSAN
Trigger: ATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS GCA 90 bp CCTGGCAGATGGATAACATTTTCTCTTGGCTCTGTGGCTAAAGTCTaGTGTGGCTGTGGTTGTAGTGGTGTTAGGAGACCTCCATCAAAC +
Preference number: 5 (lower is better)
Translates to: PGRWITFSLGSVAKV*CGCGCSGVRRPPSN
Trigger: GTTTGATGGAGGTCTCCTAACACCACTACAACCACAGCCACAGCAGACTTTAGCCACAGAGCCAAGAGAAAATGTTATCCATCTGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS CCA 90 bp CAGCCACGTTTAACACGTTGGAAATGTGACCGTTGTCCTGGCAGATaGATAACATTTTCTCTTGGCTCTGTGGCTAAAGTCTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: QPRLTRWKCDRCPGR*ITFSLGSVAKVCCG
Trigger: GCCACAGCAGACTTTAGCCACAGAGCCAAGAGAAAATGTTATCCATCTGCCAGGACAACGGTCACATTTCCAACGTGTTAAACGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTGCCTACATCCAGGTCTaGAGCAGTGACAGCGCCAAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCLCVCVCVREISAYIQV*SSDSAN
Trigger: ATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGC...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGAGGAAATACAACTCTaGCTGCCTGCGGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLEEIQL*LPAAVS
Trigger: GGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS GCA 90 bp TGCTGTCTTCTATTACAACAGGGAGGAAATACAACTCTTGCTGCCTaGGGCTGTATCCATTTCTTCGGGTTTCAATCCCCGCTGTGTTGT +
Preference number: 5 (lower is better)
Translates to: CCLLLQQGGNTTLAA*GCIHFFGFQSPLCC
Trigger: ACAACACAGCGGGGATTGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAGAAGACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTTGTGGAATCCAGGTTaGAGGTGTCTGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLWNPG*RCLWPP
Trigger: TGGAGGCCACAGACACCTCAAACCTGGATTCCACAA...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGGCCTACATCCAGGTCTaGAGCAGTGACAGCGCCAAT +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKAYIQV*SSDSAN
Trigger: ATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGC...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTCGTATGGTGGGGCAGTaGGATCCACATCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCRMVGQ*DPHHFP
Trigger: AGGAAAATGATGTGGATCCAACTGCCCCACCATACG...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTCGTATGGTGGGGCAGTaGGATCCACATCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCRMVGQ*DPHHFP
Trigger: AGGAAAATGATGTGGATCCAACTGCCCCACCATACG...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCGTATGGTGGGGCAGTaGGATCCACATCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCLCVCVCVREISRMVGQ*DPHHFP
Trigger: AGGAAAATGATGTGGATCCAACTGCCCCACCATACG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCNLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVNLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTAATCTCCCCTCTCGGTaGTATTTTAGCCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCNLPSR*YFSLHD
Trigger: GTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTTGTGGAATCCAGGTTaGAGGTGTCTGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKLWNPG*RCLWPP
Trigger: TGGAGGCCACAGACACCTCAAACCTGGATTCCACAA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTTCGGTGAGAGTGATGTaGACTATTGTTGTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCLCVCVCVREISSVRVM*TIVVPA
Trigger: AGCCGGAACAACAATAGTCAACATCACTCTCACCGA...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTCGGTGAGAGTGATGTaGACTATTGTTGTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVSVRVM*TIVVPA
Trigger: AGCCGGAACAACAATAGTCAACATCACTCTCACCGA...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGAAGTGGAAGATGCTTTaGGGGAATCGAGGTGGATTG +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVKWKML*GNRGGL
Trigger: CAATCCACCTCGATTCCCCAAAAGCATCTTCCACTT...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGAAGTGGAAGATGCTTTaGGGGAATCGAGGTGGATTG +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVKWKML*GNRGGL
Trigger: CAATCCACCTCGATTCCCCAAAAGCATCTTCCACTT...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTCAATGCATAGTAGAATaGCAATCAACGCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCLCVCVCVREISQCIVE*QSTPQC
Trigger: GCACTGGGGCGTTGATTGCAATTCTACTATGCATTG...AGAAATCTCTCTCACACACACACACACACACAAACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACTCTCCTCAATCACTTTaGGGTTTCTCAGAGCCCCGA +
Preference number: 5 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDSPQSL*GFSEPR
Trigger: TCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAGA...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGGTAATCAAAGGAATCTaGTCCCAGAGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLVIKGI*SQSVCV
Trigger: CACACACACACTCTGGGACAAGATTCCTTTGATTAC...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS TCA 90 bp AATCTCCCCTCTCGGTTGTATTTTAGCCTCCACGACTCCCTTAAGTaGCTTTATCAGGGTTATAACTCTCTTCTTCGCCAAACATGTCTG +
Preference number: 5 (lower is better)
Translates to: NLPSRLYFSLHDSLK*LYQGYNSLLRQTCL
Trigger: CAGACATGTTTGGCGAAGAAGAGAGTTATAACCCTGATAAAGTCACTTAAGGGAGTCGTGGAGGCTAAAATACAACCGAGAGGGGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000521384.5
ENST00000522262.1
CDS CCA 90 bp TCCTACAGCAGAGTAATAAAAACTCCAACACTTAACGTAGAATTGTaGAATCCAGGTTTGAGGTGTCTGTGGCCTCCACCACTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SYSRVIKTPTLNVEL*NPGLRCLWPPPLSF
Trigger: GAAGCTAAGTGGTGGAGGCCACAGACACCTCAAACCTGGATTCCACAATTCTACGTTAAGTGTTGGAGTTTTTATTACTCTGCTGTAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS-3UTR CAA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGCCAACACACTGCTTaGCATTTTGTCCGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLCQHTA*HFVRFH
Trigger: ATGAAAACGGACAAAATGCAAAGCAGTGTGTTGGCA...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTCCTGGGTTCCAGCTaGTCTATATTTCCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVLLGSS*SIFPKR
Trigger: TCTTTTGGGAAATATAGACAAGCTGGAACCCAGGAG...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTCTGCATCTGTGGCCTaGACCTGGAGTACATATGCA +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKSASVA*TWSTYA
Trigger: TGCATATGTACTCCAGGTCAAGGCCACAGATGCAGA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACTCGGTGAGAGTGATGTaGACTATTGTTGTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDSVRVM*TIVVPA
Trigger: AGCCGGAACAACAATAGTCAACATCACTCTCACCGA...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp CTTTTGTTCTCAAAAGGAATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACCAATGCATAGTAGAATaGCAATCAACGCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LLFSKGMRRVRVSLLLLDQCIVE*QSTPQC
Trigger: GCACTGGGGCGTTGATTGCAATTCTACTATGCATTG...GTCAAGAAGCAATAGCGACACTCTGACTCTCCTCATTCCTTTTGAGAACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGGTAATCAAAGGAATCTaGTCCCAGAGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVVIKGI*SQSVCV
Trigger: CACACACACACTCTGGGACAAGATTCCTTTGATTAC...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGTAATCAAAGGAATCTaGTCCCAGAGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVVIKGI*SQSVCV
Trigger: CACACACACACTCTGGGACAAGATTCCTTTGATTAC...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTCAGAGTGTCGCTATaGCTTCTTGACATAAAGACG +
Preference number: 5 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCVRVSL*LLDIKT
Trigger: CGTCTTTATGTCAAGAAGCAATAGCGACACTCTGAC...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGCCAACACACTGCTTaGCATTTTGTCCGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVCQHTA*HFVRFH
Trigger: ATGAAAACGGACAAAATGCAAAGCAGTGTGTTGGCA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTTGTGGAATCCAGGTTaGAGGTGTCTGTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINILWNPG*RCLWPP
Trigger: TGGAGGCCACAGACACCTCAAACCTGGATTCCACAA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGACACTTAACGTAGAATaGTGGAATCCAGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVTLNVE*WNPGLR
Trigger: CCTCAAACCTGGATTCCACAATTCTACGTTAAGTGT...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTACACTTAACGTAGAATaGTGGAATCCAGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: GNQRNLVPECVCVCVCLCTLNVE*WNPGLR
Trigger: CCTCAAACCTGGATTCCACAATTCTACGTTAAGTGT...ACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTCCCATATCCTTGGCTaGGATGAGTACTTGATATTG +
Preference number: 5 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLSHILG*DEYLIL
Trigger: CAATATCAAGTACTCATCCAAGCCAAGGATATGGGA...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTTCCCATATCCTTGGCTaGGATGAGTACTTGATATTG +
Preference number: 5 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCSHILG*DEYLIL
Trigger: CAATATCAAGTACTCATCCAAGCCAAGGATATGGGA...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCGAGGAAATACAACTCTaGCTGCCTGCGGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIEEIQL*LPAAVS
Trigger: GGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTC...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTGAGGAAATACAACTCTaGCTGCCTGCGGCTGTATCC +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINIEEIQL*LPAAVS
Trigger: GGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTC...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp CCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGCCACCACTTAGCTTCTaGTTTTATTGCAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: PGNQRNLVPECVCVCVCLPPLSF*FYCRND
Trigger: ATCATTTCTGCAATAAAACAAGAAGCTAAGTGGTGG...CAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCTCTGCATCTGTGGCCTaGACCTGGAGTACATATGCA +
Preference number: 5 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFISASVA*TWSTYA
Trigger: TGCATATGTACTCCAGGTCAAGGCCACAGATGCAGA...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTGGCTTGGATGAGTACTaGATATTGTTCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: KPGNQRNLVPECVCVCVCGLDEY*ILFFDF
Trigger: GAAGTCAAAGAACAATATCAAGTACTCATCCAAGCC...ACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTTGGAAGCCTCAACTTaGAAAGTGTATGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLEAST*KVYAFF
Trigger: AAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCAA...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGACTGTAAAATTTGGTTaGATAGCAGCCTCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVTVKFG*IAASGD
Trigger: ATCACCTGAGGCTGCTATCAAACCAAATTTTACAGT...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ATGAGGAGAGTCAGAGTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGACTGTAAAATTTGGTTaGATAGCAGCCTCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: MRRVRVSLLLLDIKTVSLTVKFG*IAASGD
Trigger: ATCACCTGAGGCTGCTATCAAACCAAATTTTACAGT...CAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACACTCTGACTCTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTCTCCTCAATCACTTTaGGGTTTCTCAGAGCCCCGA +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINISPQSL*GFSEPR
Trigger: TCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAGA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGATTTTAATGTGTAATTaGAGCCCTGAGGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVILMCN*SPEASL
Trigger: AAGAGAGGCCTCAGGGCTCAAATTACACATTAAAAT...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGACACTTAACGTAGAATaGTGGAATCCAGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKTLNVE*WNPGLR
Trigger: CCTCAAACCTGGATTCCACAATTCTACGTTAAGTGT...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGATGAGTACTTGATATaGTTCTTTGACTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VIKGILSQSVCVCVCVCVDEYLI*FFDFSV
Trigger: GACAGAGAAGTCAAAGAACAATATCAAGTACTCATC...CACACAAACACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGTCCCATATCCTTGGCTaGGATGAGTACTTGATATTG +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKSHILG*DEYLIL
Trigger: CAATATCAAGTACTCATCCAAGCCAAGGATATGGGA...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp AGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGTGTCTACAGGTAGAAAAATaGCTTCCACATTACAAGACA +
Preference number: 5 (lower is better)
Translates to: RNQVIKGILSQSVCVCVCLQVEK*LPHYKT
Trigger: TGTCTTGTAATGTGGAAGCAATTTTTCTACCTGTAG...ACACACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp ACTAGAAACCAGGTAATCAAAGGAATCTTGTCCCAGAGTGTGTGTGTGTGTGTGCTACAGGTAGAAAAATaGCTTCCACATTACAAGACA +
Preference number: 5 (lower is better)
Translates to: TRNQVIKGILSQSVCVCVLQVEK*LPHYKT
Trigger: TGTCTTGTAATGTGGAAGCAATTTTTCTACCTGTAG...CACACACACACACACACTCTGGGACAAGATTCCTTTGATTACCTGGTTTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCAATGCATAGTAGAATaGCAATCAACGCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINIQCIVE*QSTPQC
Trigger: GCACTGGGGCGTTGATTGCAATTCTACTATGCATTG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS TCA 90 bp ATGTGTGTGGCTTTGATAACACAGCTTTCCATGCCATCAGTATCCTaGATGCTGAACAAAATCAGAAAGTATTCTCCAGTTCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: MCVALITQLSMPSVS*MLNKIRKYSPVLLH
Trigger: ATGCAGAAGAACTGGAGAATACTTTCTGATTTTGTTCAGCATTCAGGATACTGATGGCATGGAAAGCTGTGTTATCAAAGCCACACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521384.5
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGGGCTTGGATGAGTACTaGATATTGTTCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKGLDEY*ILFFDF
Trigger: GAAGTCAAAGAACAATATCAAGTACTCATCCAAGCC...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS TCA 90 bp AGGCCAGCTTATGTATCTCAAATTGTTTTGACCTCCACAGTAACTTaGTTCTATAGCACTGGACATCAAAGCTTTAAAAAGGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: RPAYVSQIVLTSTVT*FYSTGHQSFKKAGI
Trigger: AATGCCAGCCTTTTTAAAGCTTTGATGTCCAGTGCTATAGAATCAAGTTACTGTGGAGGTCAAAACAATTTGAGATACATAAGCTGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000520668.1
CDS-3UTR CAA 90 bp AATCCCGCAATACCATCACAGCAGAGTGTACTGTACACCACTTTAAATGATAAGACACTGCTTTGCATTTaGTCCGTTTTCATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: NPAIPSQQSVLYTTLNDKTLLCI*SVFIQR
Trigger: TCTTTGAATGAAAACGGACAAAATGCAAAGCAGTGT...CTTATCATTTAAAGTGGTGTACAGTACACTCTGCTGTGATGGTATTGCGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTGGCTTGGATGAGTACTaGATATTGTTCTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINIGLDEY*ILFFDF
Trigger: GAAGTCAAAGAACAATATCAAGTACTCATCCAAGCC...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTTTGGAAGCCTCAACTTaGAAAGTGTATGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINILEAST*KVYAFF
Trigger: AAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCAA...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCTTGGAAGCCTCAACTTaGAAAGTGTATGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFILEAST*KVYAFF
Trigger: AAAGAAGGCATACACTTTCAAAGTTGAGGCTTCCAA...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCATTTTAATGTGTAATTaGAGCCCTGAGGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSILMCN*SPEASL
Trigger: AAGAGAGGCCTCAGGGCTCAAATTACACATTAAAAT...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 90 bp AATAAAGGGTTACTAACTTTACTCGCAATTATGGAGAAATTATACTaGGCAGTGCTTTCTCTGTCTAGTAATTCATTAGTGGCGATGGTT +
Preference number: 5 (lower is better)
Translates to: NKGLLTLLAIMEKLY*AVLSLSSNSLVAMV
Trigger: AACCATCGCCACTAATGAATTACTAGACAGAGAAAGCACTGCGCAGTATAATTTCTCCATAATTGCGAGTAAAGTTAGTAACCCTTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS-3UTR CAA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCACACTGCTTTGCATTTaGTCCGTTTTCATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSTLLCI*SVFIQR
Trigger: TCTTTGAATGAAAACGGACAAAATGCAAAGCAGTGT...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCCCACCACTTAGCTTCTaGTTTTATTGCAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFIPPLSF*FYCRND
Trigger: ATCATTTCTGCAATAAAACAAGAAGCTAAGTGGTGG...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGATTTCTATTAATATTCCACCACTTAGCTTCTaGTTTTATTGCAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: VCVCLCVCVCVREISINIPPLSF*FYCRND
Trigger: ATCATTTCTGCAATAAAACAAGAAGCTAAGTGGTGG...AATATTAATAGAAATCTCTCTCACACACACACACACACACAAACACACACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000522262.1
CDS-3UTR CAA 90 bp CTGAATCTGGTGACTGTTAAAACCAATTTTCCACACACCAGTACAATATTAAGCGATGAGTACTTGATATaGTTCTTTGACTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LNLVTVKTNFPHTSTILSDEYLI*FFDFSV
Trigger: GACAGAGAAGTCAAAGAACAATATCAAGTACTCATC...GCTTAATATTGTACTGGTGTGTGGAAAATTGGTTTTAACAGTCACCAGATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS-3UTR CAA 90 bp GTGTCGCTATTGCTTCTTGACATAAAGACGGTGTCTTTGTTTTATGTCTTTATCCTACAGGTAGAAAAATaGCTTCCACATTACAAGACA +
Preference number: 5 (lower is better)
Translates to: VSLLLLDIKTVSLFYVFILQVEK*LPHYKT
Trigger: TGTCTTGTAATGTGGAAGCAATTTTTCTACCTGTAG...GATAAAGACATAAAACAAAGACACCGTCTTTATGTCAAGAAGCAATAGCGACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 72 bp GCTGCAGGAGCAGCAGCACCGACGGCCGCAGCAGGGTaGCAACAGCTCAGCCTTGCGCGGAAGGTGAGACCC +
Preference number: 6 (lower is better)
Translates to: AAGAAAPTAAAG*QQLSLARKVRP
Trigger: GGGTCTCACCTTCCGCGCAAGGCTGAGCTGTTGGCACCCTGCTGCGGCCGTCGGTGCTGCTGCTCCTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 72 bp ACCGACGGCCGCAGCAGGGTGCCAACAGCTCAGCCTTaGGCGGAAGGTGAGACCCTTCTCTTCTGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: TDGRSRVPTAQP*AEGETLLFCFP
Trigger: GGGGAAACAGAAGAGAAGGGTCTCACCTTCCGCGCAAGGCTGAGCTGTTGGCACCCTGCTGCGGCCGTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS CCA 72 bp ACTCTGCCACGGACCCACTCCCTTCGTAGGCATATGTaGCCAGTGAATCGTATGGTGGGGCAGTTGGATCCA +
Preference number: 6 (lower is better)
Translates to: TLPRTHSLRRHM*PVNRMVGQLDP
Trigger: TGGATCCAACTGCCCCACCATACGATTCACTGGCCACATATGCCTACGAAGGGAGTGGGTCCGTGGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS TCA 72 bp CAGCAGGGTGCCAACAGCTCAGCCTTGCGCGGAAGGTaGGACCCTTCTCTTCTGTTTCCCCTTTCCAAATCA +
Preference number: 6 (lower is better)
Translates to: QQGANSSALRGR*DPSLLFPLSKS
Trigger: TGATTTGGAAAGGGGAAACAGAAGAGAAGGGTCTCACCTTCCGCGCAAGGCTGAGCTGTTGGCACCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS GCA 72 bp TTCTGTGGTGAGAGAGTCTATAGAGCTGAGGGACTCTaGCACGGACCCACTCCCTTCGTAGGCATATGTGGC +
Preference number: 6 (lower is better)
Translates to: FCGERVYRAEGL*HGPTPFVGICG
Trigger: GCCACATATGCCTACGAAGGGAGTGGGTCCGTGGCAGAGTCCCTCAGCTCTATAGACTCTCTCACCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CCA 72 bp AACCTCCATGGTGTAGAGCGGCTTGCTGAAAACCGGTaGCTCATCTACGTCCAGCACGCTGATCTTCACCGT +
Preference number: 6 (lower is better)
Translates to: NLHGVERLAENR*LIYVQHADLHR
Trigger: ACGGTGAAGATCAGCGTGCTGGACGTAGATGAGCCACCGGTTTTCAGCAAGCCGCTCTACACCATGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 72 bp GAAGTACCTAACAGCACTGCTGCCTACATCCAGGTCTaGAGCAGTGACAGCGCCAATGATGGTCCCTACCGG +
Preference number: 6 (lower is better)
Translates to: EVPNSTAAYIQV*SSDSANDGPYR
Trigger: CCGGTAGGGACCATCATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGCAGCAGTGCTGTTAGGTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS TCA 72 bp AAGTACCTAACAGCACTGCTGCCTACATCCAGGTCTTaGGCAGTGACAGCGCCAATGATGGTCCCTACCGGA +
Preference number: 6 (lower is better)
Translates to: KYLTALLPTSRS*AVTAPMMVPTG
Trigger: TCCGGTAGGGACCATCATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGCAGCAGTGCTGTTAGGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS TCA 72 bp CACGGACCCACTCCCTTCGTAGGCATATGTGGCCAGTaGATCGTATGGTGGGGCAGTTGGATCCACATCATT +
Preference number: 6 (lower is better)
Translates to: HGPTPFVGICGQ*IVWWGSWIHII
Trigger: AATGATGTGGATCCAACTGCCCCACCATACGATTCACTGGCCACATATGCCTACGAAGGGAGTGGGTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 90 bp CCAATCTATGAAGTACCTAACAGCACTGCTGCCTACATCCAGGTCTaGAGCAGTGACAGCGCCAATGATGGTCCCTACCGGAGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: PIYEVPNSTAAYIQV*SSDSANDGPYRSVF
Trigger: GAAGACACTCCGGTAGGGACCATCATTGGCGCTGTCACTGCTCAAGACCTGGATGTAGGCAGCAGTGCTGTTAGGTACTTCATAGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 90 bp AGGGTAGCTGCTGTCTTCTATTACAACAGGGAGGAAATACAACTCTaGCTGCCTGCGGCTGTATCCATTTCTTCGGGTTTCAATCCCCGC +
Preference number: 6 (lower is better)
Translates to: RVAAVFYYNREEIQL*LPAAVSISSGFNPR
Trigger: GCGGGGATTGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAGAAGACAGCAGCTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 90 bp TGTTTCCCCTTTCCAAATCACTGTGCCAACACACTGCTTTGCATTTaGTCCGTTTTCATTCAAAGAAGGTTCTCCAGGCCGGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: CFPFPNHCANTLLCI*SVFIQRRFSRPGSQ
Trigger: CTGGCTGCCCGGCCTGGAGAACCTTCTTTGAATGAAAACGGACAAAATGCAAAGCAGTGTGTTGGCACAGTGATTTGGAAAGGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000504376.6
CDS TCA 72 bp GTTGCCCAGCAGGTGAAAGATCTCGGTCTGCAGCACTaGCTATCTGAATTATCTGTCCTGGCTTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: VAQQVKDLGLQH*LSELSVLAWHF
Trigger: AAAATGCCAAGCCAGGACAGATAATTCAGATAGTCAGTGCTGCAGACCGAGATCTTTCACCTGCTGGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS GCA 72 bp CTATTACAACAGGGAGGAAATACAACTCTTGCTGCCTaGGGCTGTATCCATTTCTTCGGGTTTCAATCCCCG +
Preference number: 6 (lower is better)
Translates to: LLQQGGNTTLAA*GCIHFFGFQSP
Trigger: CGGGGATTGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS TCA 72 bp AGGCTTCTGCTGTATTATATTCCATCTAAAGGGGCCTaGGCCTCTTATCTCCTCCTTGAAGATGACGGAAGC +
Preference number: 6 (lower is better)
Translates to: RLLLYYIPSKGA*ASYLLLEDDGS
Trigger: GCTTCCGTCATCTTCAAGGAGGAGATAAGAGGCTCAGGCCCCTTTAGATGGAATATAATACAGCAGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521745.1
CDS GCA 72 bp TGGATAACATTTTCTCTTGGCTCTGTGGCTAAAGTCTaGTGTGGCTGTGGTTGTAGTGGTGTTAGGAGACCT +
Preference number: 6 (lower is better)
Translates to: WITFSLGSVAKV*CGCGCSGVRRP
Trigger: AGGTCTCCTAACACCACTACAACCACAGCCACAGCAGACTTTAGCCACAGAGCCAAGAGAAAATGTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS CAA 72 bp GCTGTCTTCTATTACAACAGGGAGGAAATACAACTCTaGCTGCCTGCGGCTGTATCCATTTCTTCGGGTTTC +
Preference number: 6 (lower is better)
Translates to: AVFYYNREEIQL*LPAAVSISSGF
Trigger: GAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAGAAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 72 bp TTATATCCCTGCGAATTTTGTTCTCCTCAATCACTTTaGGGTTTCTCAGAGCCCCGATGTCGAAAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: LYPCEFCSPQSL*GFSEPRCRKPG
Trigger: CCCAGGCTTTCGACATCGGGGCTCTGAGAAACCCAAAAGTGATTGAGGAGAACAAAATTCGCAGGGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 72 bp AGGCATATGTGGCCAGTGAATCGTATGGTGGGGCAGTaGGATCCACATCATTTTCCTGTAGCCTTTGATGAA +
Preference number: 6 (lower is better)
Translates to: RHMWPVNRMVGQ*DPHHFPVAFDE
Trigger: TTCATCAAAGGCTACAGGAAAATGATGTGGATCCAACTGCCCCACCATACGATTCACTGGCCACATATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS GCA 72 bp CTGTCTTCTATTACAACAGGGAGGAAATACAACTCTTaGTGCCTGCGGCTGTATCCATTTCTTCGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: LSSITTGRKYNS*CLRLYPFLRVS
Trigger: TGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAGAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CAA 90 bp CTTTCCTACAGCAGAGTAATAAAAACTCCAACACTTAACGTAGAATaGTGGAATCCAGGTTTGAGGTGTCTGTGGCCTCCACCACTTAGC +
Preference number: 6 (lower is better)
Translates to: LSYSRVIKTPTLNVE*WNPGLRCLWPPPLS
Trigger: GCTAAGTGGTGGAGGCCACAGACACCTCAAACCTGGATTCCACAATTCTACGTTAAGTGTTGGAGTTTTTATTACTCTGCTGTAGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS TCA 72 bp ATTCCATACCCAGCCACGTTTAACACGTTGGAAATGTaGCCGTTGTCCTGGCAGATGGATAACATTTTCTCT +
Preference number: 6 (lower is better)
Translates to: IPYPATFNTLEM*PLSWQMDNIFS
Trigger: AGAGAAAATGTTATCCATCTGCCAGGACAACGGTCACATTTCCAACGTGTTAAACGTGGCTGGGTATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS TCA 72 bp TCCCTTATGTCTGTGTTATCTTCCATGGGTGGTCTCTaGCGAGGTAAACAGAGAGAGTCTGGTTTTATATCC +
Preference number: 6 (lower is better)
Translates to: SLMSVLSSMGGL*RGKQRESGFIS
Trigger: GGATATAAAACCAGACTCTCTCTGTTTACCTCGTCAGAGACCACCCATGGAAGATAACACAGACATAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS GCA 72 bp TCTTCTATTACAACAGGGAGGAAATACAACTCTTGCTaGCTGCGGCTGTATCCATTTCTTCGGGTTTCAATC +
Preference number: 6 (lower is better)
Translates to: SSITTGRKYNSC*LRLYPFLRVSI
Trigger: GATTGAAACCCGAAGAAATGGATACAGCCGCAGGCAGCAAGAGTTGTATTTCCTCCCTGTTGTAATAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS CCA 72 bp TTAACACGTTGGAAATGTGACCGTTGTCCTGGCAGATaGATAACATTTTCTCTTGGCTCTGTGGCTAAAGTC +
Preference number: 6 (lower is better)
Translates to: LTRWKCDRCPGR*ITFSLGSVAKV
Trigger: GACTTTAGCCACAGAGCCAAGAGAAAATGTTATCCATCTGCCAGGACAACGGTCACATTTCCAACGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS TCA 72 bp TCTCGGTTGTATTTTAGCCTCCACGACTCCCTTAAGTaGCTTTATCAGGGTTATAACTCTCTTCTTCGCCAA +
Preference number: 6 (lower is better)
Translates to: SRLYFSLHDSLK*LYQGYNSLLRQ
Trigger: TTGGCGAAGAAGAGAGTTATAACCCTGATAAAGTCACTTAAGGGAGTCGTGGAGGCTAAAATACAACCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000521384.5
ENST00000522262.1
CDS CCA 72 bp AGAGTAATAAAAACTCCAACACTTAACGTAGAATTGTaGAATCCAGGTTTGAGGTGTCTGTGGCCTCCACCA +
Preference number: 6 (lower is better)
Translates to: RVIKTPTLNVEL*NPGLRCLWPPP
Trigger: TGGTGGAGGCCACAGACACCTCAAACCTGGATTCCACAATTCTACGTTAAGTGTTGGAGTTTTTATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS CAA 72 bp AGCAGAGTAATAAAAACTCCAACACTTAACGTAGAATaGTGGAATCCAGGTTTGAGGTGTCTGTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRVIKTPTLNVE*WNPGLRCLWPP
Trigger: TGGAGGCCACAGACACCTCAAACCTGGATTCCACAATTCTACGTTAAGTGTTGGAGTTTTTATTACTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000518209.1
ENST00000522262.1
CDS CAA 90 bp ATCCCCGCTGTGTTGTTTCTGAAGTCACGAACTGTAAAATTTGGTTaGATAGCAGCCTCAGGTGATAATCTAAAGGAGAATTGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: IPAVLFLKSRTVKFG*IAASGDNLKENCCP
Trigger: TGGGCAACAATTCTCCTTTAGATTATCACCTGAGGCTGCTATCAAACCAAATTTTACAGTTCGTGACTTCAGAAACAACACAGCGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS GCA 72 bp GCTTTAAAAAGGCTGGCATTCTTTAAAACTCCCAACTaGTCCTGGGTTCCAGCTTGTCTATATTTCCCAAAA +
Preference number: 6 (lower is better)
Translates to: ALKRLAFFKTPN*SWVPACLYFPK
Trigger: TTTTGGGAAATATAGACAAGCTGGAACCCAGGAGCAGTTGGGAGTTTTAAAGAATGCCAGCCTTTTTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382254.6
ENST00000520668.1
CDS TCA 72 bp TTGGATCCACATCATTTTCCTGTAGCCTTTGATGAATaGAATCCCTTATGTCTGTGTTATCTTCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: LDPHHFPVAFDE*NPLCLCYLPWV
Trigger: CACCCATGGAAGATAACACAGACATAAGGGATTTCATTCATCAAAGGCTACAGGAAAATGATGTGGATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1
CDS GCA 72 bp TCTTTAAAAAGGCTGGCATTCTTTAAAACTCCCAACTaGTCCTGGGTTCCAGCTTGTCTATATTTCCCAAAA +
Preference number: 6 (lower is better)
Translates to: SLKRLAFFKTPN*SWVPACLYFPK
Trigger: TTTTGGGAAATATAGACAAGCTGGAACCCAGGAGCAGTTGGGAGTTTTAAAGAATGCCAGCCTTTTTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504376.6
CDS CAA 72 bp GTGTTGTTTCTGAAGTCACGAACTGTAAAATTTGGTTaGATAGCAGCCTCAGGTGATAATCTAAAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: VLFLKSRTVKFG*IAASGDNLKEN
Trigger: ATTCTCCTTTAGATTATCACCTGAGGCTGCTATCAAACCAAATTTTACAGTTCGTGACTTCAGAAACAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382254.6
ENST00000504376.6
ENST00000517378.1
ENST00000521384.5
ENST00000522262.1