RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000039068

Ensembl transcript IDs: ENST00000261769.10, ENST00000422392.6, ENST00000561751.1, ENST00000562836.5, ENST00000564676.5, ENST00000564745.1, ENST00000565810.1, ENST00000566510.5, ENST00000566612.5, ENST00000567320.1

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: GIGRAGKIPGDTHEG*CNVVTSHFRPSVQA
Trigger: GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTaGAGCTGGCTCAAGTCAAAGTCCTGGTCCTCTTCTCCGCCTCCT +
Preference number: 1 (lower is better)
Translates to: ATSLRVTSGRASRPL*SWLKSKSWSSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CCA 90 bp AAAACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTaGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCC +
Preference number: 1 (lower is better)
Translates to: KTTSNVISAFPSTWV*GPPLSSPLVVLAAS
Trigger: GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR GCA 90 bp CATCTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTaGATTTCCCAGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCC +
Preference number: 1 (lower is better)
Translates to: HLKGRELKNHQQRDF*ISQHMGLGPASLES
Trigger: GGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR GCA 90 bp AAGAATTCCTCCAAGAATCCCCAGAATGGCAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: KNSSKNPQNGRNLQS*FDRLCLPTDASGPF
Trigger: GAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR TCA 90 bp AGAAACTCATCTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTaGTTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCTCTCT +
Preference number: 1 (lower is better)
Translates to: RNSSQGKGAEKPPAT*FLHFPAHGSGARLS
Trigger: AGAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAGATGAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR GCA 90 bp AGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCG +
Preference number: 1 (lower is better)
Translates to: SKARIPPRIPRMAGI*NPASTGCAFLQTPA
Trigger: CGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 90 bp TTGTCTGTAGCTATGATTAGGGCTGTGTACGTGCTGTTCTTCACGTaGTCAAAATCCTCCCTGTCCAGCTCAGCCCGAGTGGAAATGGCA +
Preference number: 1 (lower is better)
Translates to: LSVAMIRAVYVLFFT*SKSSLSSSARVEMA
Trigger: TGCCATTTCCACTCGGGCTGAGCTGGACAGGGAGGATTTTGAGCACGTGAAGAACAGCACGTACACAGCCCTAATCATAGCTACAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR TCA 90 bp ACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCTCCAAGCCCACTTTTCATAGTTCCG +
Preference number: 1 (lower is better)
Translates to: TSIILSISLLNCQAQ*QALLPSPSPLFIVP
Trigger: CGGAACTATGAAAAGTGGGCTTGGAGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 90 bp CTCCTGCCATCTCCAAGCCCACTTTTCATAGTTCCGCTCTGTCTTTaGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGAGTATATCA +
Preference number: 1 (lower is better)
Translates to: LLPSPSPLFIVPLCL*LQHFRHYSKSWSIS
Trigger: TGATATACTCCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTATGAAAAGTGGGCTTGGAGATGGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 90 bp CTGAGGCTTTGGATTCCTCTCACAGAAGAATATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: LRLWIPLTEEYSSRF*YGGVVIHIRQDQQK
Trigger: CTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCCATACCAGAACCTCGAACTATATTCTTCTGTGAGAGGAATCCAAAGCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR CCA 90 bp GAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATaGCAGGAATTTGCAATCCTGCTTCGACAGGCTGTGCCTTCCTAC +
Preference number: 1 (lower is better)
Translates to: ESELAKQEFLQESPE*QEFAILLRQAVPSY
Trigger: GTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CCA 90 bp GTCTCTCCAAATCCGATATGTTATTTTCTGTTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGATGTGATTTCCTGGCCCACGCCAAA +
Preference number: 1 (lower is better)
Translates to: VSPNPICYFLFHKCV*LLGSVGCDFLAHAK
Trigger: TTTGGCGTGGGCCAGGAAATCACATCCTACACTGCCCAGGAGCCAGACACATTTATGGAACAGAAAATAACATATCGGATTTGGAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR TCA 90 bp TGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACATGTTaGGACTCCTCCATTCCTTCCAGAATTTTCAGAGATGAGGTAGAC +
Preference number: 1 (lower is better)
Translates to: WALSTNHGSCVRNTC*DSSIPSRIFRDEVD
Trigger: GTCTACCTCATCTCTGAAAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR TCA 90 bp TTCTGTAGACATCATCAAAAGCAGGCACTTGGGGATTCTGGGCTTTaGGTACAAACCACGGATCTTGTGTCAGAAACACATGTTGAGACT +
Preference number: 1 (lower is better)
Translates to: FCRHHQKQALGDSGL*VQTTDLVSETHVET
Trigger: AGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCTGCTTTTGATGATGTCTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CCA 90 bp ATTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTGAGGCTTTaGATTCCTCTCACAGAAGAATATAGTTCGAGGTTCTGGTATGGG +
Preference number: 1 (lower is better)
Translates to: IGRKVCINDVYDLRL*IPLTEEYSSRFWYG
Trigger: CCCATACCAGAACCTCGAACTATATTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR TCA 90 bp GGAGATGTATTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCACAGAAGAATATAGTTCGAGGTTCT +
Preference number: 1 (lower is better)
Translates to: GDVLGGRSASMMFMT*GFGFLSQKNIVRGS
Trigger: AGAACCTCGAACTATATTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAATACATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 90 bp AGACAAAGACACAAACTTCTTACCCTAAAAGAGCCCAATAATTTCTaGATCAGAGAACTCCTATCTTGGGCAAAGCAACTGAATTCAGGA +
Preference number: 1 (lower is better)
Translates to: RQRHKLLTLKEPNNF*IRELLSWAKQLNSG
Trigger: TCCTGAATTCAGTTGCTTTGCCCAAGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTTGTGTCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 90 bp ACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTaGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACA +
Preference number: 1 (lower is better)
Translates to: TLKEPNNFCIRELLS*AKQLNSGVRVDIKT
Trigger: TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCACCGGGGGACACTCATaGGGGTTGGTGCAACGTCGT +
Preference number: 2 (lower is better)
Translates to: STWVWGPPLSSPLVVLAATGGHS*GLVQRR
Trigger: ACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGT...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCAGGCCCCTGTGCAGCTaGCTCAAGTCAAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: STWVWGPPLSSPLVVLAARPLCS*LKSKSW
Trigger: CCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCT...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGTAATCCCAATACTCTaGGAGGCCAAGATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAVIPIL*EAKMGG
Trigger: TCCTCCCATCTTGGCCTCCCAGAGTATTGGGATTAC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGGGTCGTTGTACTGAATaGTCCAGTTGGCACTCGCCC +
Preference number: 2 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWGRCTE*SSWHSP
Trigger: GGGCGAGTGCCAACTGGACCATTCAGTACAACGACC...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTCCAGCACATCCACGGTaGCGGTGGCTGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: SDSEEFRELRLAASEPLPPAHPR*RWLWRW
Trigger: CCACCTCCACAGCCACCGTCACCGTGGATGTGCTGG...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR GCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWRNLQS*FDRLCL
Trigger: AAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCT...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCACTGAATGGTCCAGTTaGCACTCGCCCCGTGTGTTA +
Preference number: 2 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVTEWSS*HSPRVL
Trigger: TAACACACGGGGCGAGTGCCAACTGGACCATTCAGT...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGAAATCTGCAAGGTGCTaGGTGAACCTTCTGATGCTA +
Preference number: 2 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWKSARC*VNLLML
Trigger: TAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTT...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACAGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGT +
Preference number: 2 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTDTHEG*CNVVTS
Trigger: ACTCGTAACGACGTTGCACCAACCCTCATGAGTGTC...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGGGCAGTGTAGGATGTaGTTTCCTGGCCCACGCCAA +
Preference number: 2 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPGQCRM*FPGPRQ
Trigger: TTGGCGTGGGCCAGGAAATCACATCCTACACTGCCC...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR GCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGC +
Preference number: 2 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQARMAGI*NPASTG
Trigger: GCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCT...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGA +
Preference number: 2 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTFHKCV*LLGSVG
Trigger: TCCTACACTGCCCAGGAGCCAGACACATTTATGGAA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR TCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCAGGACAAGGCTGCAGTaGGCTGTGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPRTRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGCAGCCTTGTCCT...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCTATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATT +
Preference number: 2 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVYSSRF*YGGVVI
Trigger: AATGACAACGCCCCCATACCAGAACCTCGAACTATA...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCATATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATT +
Preference number: 2 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSYSSRF*YGGVVI
Trigger: AATGACAACGCCCCCATACCAGAACCTCGAACTATA...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAAGGCCCCTGTGCAGCTaGCTCAAGTCAAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: DHITASQAWAMERNCLLKRPLCS*LKSKSW
Trigger: CCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATGTTCCAGTAGCAACTaGAGAACCATTGTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTCSSSN*RTIVCS
Trigger: GCTACAGACAATGGTTCTCCAGTTGCTACTGGAACA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR CCA 90 bp GGTATACGTAGGGAAACTCTCTCGGTCCAGCCCAGTGGTGACCACACTGATGACGGATGGTGTAAGCGATaGCGGCATTGTAGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: GIRRETLSVQPSGDHTDDGWCKR*RHCRCS
Trigger: TGAACACCTACAATGCCGCCATCGCTTACACCATCC...GTCATCAGTGTGGTCACCACTGGGCTGGACCGAGAGAGTTTCCCTACGTATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
3UTR-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCAGCTCAGCCCGAGTaGAAATGGCACCAGTGTCCG +
Preference number: 2 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRPAQPE*KWHQCP
Trigger: CGGACACTGGTGCCATTTCCACTCGGGCTGAGCTGG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR TCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGCAGTAAGGGCTCTTTaGCCACCGCTCTCCTCCGAA +
Preference number: 2 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRAVRAL*PPLSSE
Trigger: TTCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR GCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTGCTTCGACAGGCTGTaGCTTCCTACAGACGCCAGC +
Preference number: 2 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWCFDRL*LPTDAS
Trigger: GCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGCCCAGCACATGGGTCTaGGGCCCGCCTCTCTCGAGT +
Preference number: 2 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLPSTWV*GPPLSS
Trigger: ACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGG...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCATTTCCCAGCACATaGGTCTGGGGCCCGCCTCTC +
Preference number: 2 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPAFPST*VWGPPL
Trigger: GAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTTAGTTCTGCTGTaGAGGGAGATGTATTGGGAG +
Preference number: 2 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPVLVLL*REMYWE
Trigger: CTCCCAATACATCTCCCTTCACAGCAGAACTAACAC...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCACACAGTCACACACGCTaGCCTCTAAGGTGGTCACTT +
Preference number: 2 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASHSHTR*PLRWSL
Trigger: AAGTGACCACCTTAGAGGTCAGCGTGTGTGACTGTG...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGCATTTCCCAGCACATaGGTCTGGGGCCCGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFAFPST*VWGPPL
Trigger: GAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCACTTGGTCTTTATTCTaGTTATCCATGAGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVTWSLF*LSMSLR
Trigger: TCTCAAGCTCATGGATAACCAGAATAAAGACCAAGT...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp CTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGAGGCACAAAATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: LAHAKVLGHFHSLFRRHKMMFMT*GFGFLS
Trigger: TGAGAGGAATCCAAAGCCTCAGGTCATAAACATCAT...TTTGTGCCTCCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR TCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGTTGGGTCGTTGTACTaGATGGTCCAGTTGGCACTC +
Preference number: 2 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRVGSLY*MVQLAL
Trigger: GAGTGCCAACTGGACCATTCAGTACAACGACCCAAC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTTATGACCTGAGGCTTTaGATTCCTCTCACAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SDSEEFRELRLAASEPLPYDLRL*IPLTEE
Trigger: TTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATA...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCTCAAGTCAAAGTCCTaGTCCTCTTCTCCGCCTCCT +
Preference number: 2 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRLKSKS*SSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTAGGACAAGGCTGCAGTaGGCTGTGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPRTRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGCAGCCTTGTCCT...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAGGTGCAAGGATAGCTTaGGCCTGGGAGGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERGARIA*AWEDKA
Trigger: AGCCTTGTCCTCCCAGGCTCAAGCTATCCTTGCACC...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWNCQAQ*QALLPS
Trigger: AGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATT...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPMMFMT*GFGFLS
Trigger: TGAGAGGAATCCAAAGCCTCAGGTCATAAACATCAT...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR GCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASRNLQS*FDRLCL
Trigger: AAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCT...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR GCA 90 bp GTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACGTGCTGTTCTTCACGTaGTCAAAATCCTCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VVIHIRQDQQKCPCSSSNVLFFT*SKSSLS
Trigger: GGACAGGGAGGATTTTGAGCACGTGAAGAACAGCAC...GTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR GCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCATTAGGGCTGTGTACGTaGTGTTCTTCACGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASLGLCT*CSSRAQ
Trigger: TTGAGCACGTGAAGAACAGCACGTACACAGCCCTAA...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR CCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTCCCAGCACATGGGTCTaGGGCCCGCCTCTCTCGAGT +
Preference number: 2 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSPSTWV*GPPLSS
Trigger: ACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGG...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CAA 90 bp AGCAGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTaGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: SRHLGILGFEYKPRI*CQKHMLRLLHSFQN
Trigger: ATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CAA 90 bp GCCCGAGTGGAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTaGGCAGTGTCTCTCCAAATCCGATATGTTATTTTCTGTTCCATA +
Preference number: 2 (lower is better)
Translates to: ARVEMAPVSGLISSQ*AVSLQIRYVIFCSI
Trigger: TATGGAACAGAAAATAACATATCGGATTTGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTCCACTCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR CAA 90 bp TTCCTCTCACAGAAGAATATAGTTCGAGGTTCTGGTATGGGGGCGTaGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: FLSQKNIVRGSGMGA*SFTSDRISRSVPVP
Trigger: TGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCCATACCAGAACCTCGAACTATATTCTTCTGTGAGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR TCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGGTGGGAGAACTGCTTaGGCCCCAGAGTTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFGGRTA*APEFEV
Trigger: AACCTCAAACTCTGGGGCTCAAGCAGTTCTCCCACC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACAAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCT +
Preference number: 2 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTNCQAQ*QALLPS
Trigger: AGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATT...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR-3UTR TCA 90 bp GTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACGTGTTAGTTCTGCTGTaGAGGGAGATGTATTGGGAG +
Preference number: 2 (lower is better)
Translates to: VVIHIRQDQQKCPCSSSNVLVLL*REMYWE
Trigger: CTCCCAATACATCTCCCTTCACAGCAGAACTAACAC...GTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR CCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGCAATTTCATCGGGATTaGCAGGGCGGGGAAGATACC +
Preference number: 2 (lower is better)
Translates to: AAESELAKQEFLQESPEWQFHRD*QGGEDT
Trigger: GGTATCTTCCCCGCCCTGCCAATCCCGATGAAATTG...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR GCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGATTCTCGGTTTTCTGTaGACACCTGGAATTGGGCAA +
Preference number: 2 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWILGFL*TPGIGQ
Trigger: TTGCCCAATTCCAGGTGTGCACAGAAAACCGAGAAT...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCTCAAGTCAAAGTCCTaGTCCTCTTCTCCGCCTCCT +
Preference number: 2 (lower is better)
Translates to: ETKFLKKICKVLGEPSDALKSKS*SSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR TCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTGGTGCAAGGATAGCTTaGGCCTGGGAGGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSGARIA*AWEDKA
Trigger: AGCCTTGTCCTCCCAGGCTCAAGCTATCCTTGCACC...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR GCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTCAGCAACGTGATTTCTaGATTTCCCAGCACATGGGT +
Preference number: 2 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPQQRDF*ISQHMG
Trigger: ACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTG...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGTAATCCCAATACTCTaGGAGGCCAAGATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAVIPIL*EAKMGG
Trigger: TCCTCCCATCTTGGCCTCCCAGAGTATTGGGATTAC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTACCTAGTCAAGATGTaGCCAGACAAAGACACAAAC +
Preference number: 2 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWYLVKM*PDKDTN
Trigger: GTTTGTGTCTTTGTCTGGCCACATCTTGACTAGGTA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGATAGATTCTTGGGTTaGGTCGTTGTACTGAATGGT +
Preference number: 2 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRDRFLG*VVVLNG
Trigger: ACCATTCAGTACAACGACCCAACCCAAGAATCTATC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR TCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGGTTACAGTGAGCTATaGTCACATCACTGCATCCCA +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFGYSEL*SHHCIP
Trigger: TGGGATGCAGTGATGTGATCATAGCTCACTGTAACC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR TCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGTCAGAAACACATGTTaGGACTCCTCCATTCCTTCC +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFVRNTC*DSSIPS
Trigger: GGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGAC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGACAGCAACGTGATTTCTaGATTTCCCAGCACATGGGT +
Preference number: 2 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERQQRDF*ISQHMG
Trigger: ACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTG...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTGGTCGTTGTACTGAATaGTCCAGTTGGCACTCGCCC +
Preference number: 2 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIGRCTE*SSWHSP
Trigger: GGGCGAGTGCCAACTGGACCATTCAGTACAACGACC...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR GCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAGAAAATCTGCAAGGTaGTGGGTGAACCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFRKSAR*WVNLLM
Trigger: CATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAAGAAAATCTGCAAGGTaGTGGGTGAACCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERRKSAR*WVNLLM
Trigger: CATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCT...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR GCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCGAGCCCAATAATTTCTaGATCAGAGAACTCCTATCT +
Preference number: 2 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSEPNNF*IRELLS
Trigger: AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTC...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGTTGATATTAAAACATaGAGGCTGGGCACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAVDIKT*RLGTAA
Trigger: AGCTGCTGTGCCCAGCCTCCATGTTTTAATATCAAC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp GTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACACTTGGTCTTTATTCTaGTTATCCATGAGCTTGAGA +
Preference number: 2 (lower is better)
Translates to: VVIHIRQDQQKCPCSSSNTWSLF*LSMSLR
Trigger: TCTCAAGCTCATGGATAACCAGAATAAAGACCAAGT...GTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR TCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAGTTTGAGGTTACAGTaGGCTATGATCACATCACTG +
Preference number: 2 (lower is better)
Translates to: ETKFLKKICKVLGEPSDASLRLQ*AMITSL
Trigger: CAGTGATGTGATCATAGCTCACTGTAACCTCAAACT...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTTATGACCTGAGGCTTTaGATTCCTCTCACAGAAGAA +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFYDLRL*IPLTEE
Trigger: TTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATA...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGTCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCC +
Preference number: 2 (lower is better)
Translates to: AAESELAKQEFLQESPEWSKVVT*SLFWLS
Trigger: GGATAACCAGAATAAAGACCAAGTGACCACCTTAGA...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CAA 90 bp TTAATGAACACACTTACTCAGAACAAGTCACTGGATAGCTGCCCATaGCAAGTTACATACTCAGGAGATGAAAGAGGGAAGCCATTAAAG +
Preference number: 2 (lower is better)
Translates to: LMNTLTQNKSLDSCP*QVTYSGDERGKPLK
Trigger: CTTTAATGGCTTCCCTCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTTCTGAGTAAGTGTGTTCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACAAATTTGGGTATCTTTTaGACATCACCACCATGTAAA +
Preference number: 2 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTNLGIF*TSPPCK
Trigger: TTTACATGGTGGTGATGTCCAAAAGATACCCAAATT...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTTCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCC +
Preference number: 2 (lower is better)
Translates to: ETKFLKKICKVLGEPSDASKVVT*SLFWLS
Trigger: GGATAACCAGAATAAAGACCAAGTGACCACCTTAGA...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTCACTATTCTAAGTCCTaGAGTATATCACTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: TDLVSETHVETPPFLPEFHYSKS*SISLLL
Trigger: AAGCAAGAGTGATATACTCCAGGACTTAGAATAGTG...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAGATAGATTCTTGGGTTaGGTCGTTGTACTGAATGGT +
Preference number: 2 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTDRFLG*VVVLNG
Trigger: ACCATTCAGTACAACGACCCAACCCAAGAATCTATC...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR GCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTTTCCTTAAGAAAATCTaGAAGGTGCTGGGTGAACCT +
Preference number: 2 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIFLKKI*KVLGEP
Trigger: AGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAA...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTTTTCTGTGCACACCTaGAATTGGGCAAATGTGTTC +
Preference number: 2 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSFSVHT*NWANVF
Trigger: GAACACATTTGCCCAATTCCAGGTGTGCACAGAAAA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CCA 72 bp GTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTaGCTCAAGTCAAAGTCCTGGTCCTCTTCTCCGCCT +
Preference number: 3 (lower is better)
Translates to: VTSGRASRPLCS*LKSKSWSSSPP
Trigger: AGGCGGAGAAGAGGACCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACAGGCAGTAAGGGCTCTTaGACCACCGCTCTCCTCCGA +
Preference number: 3 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTGSKGS*TTALLR
Trigger: TCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGCC...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 72 bp GCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTaGAACGTCGTTACGAGTCACTTCAGGCCGAGCGTC +
Preference number: 3 (lower is better)
Translates to: AGKIPGDTHEGW*NVVTSHFRPSV
Trigger: GACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CCA 72 bp AGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGC +
Preference number: 3 (lower is better)
Translates to: RAGKIPGDTHEG*CNVVTSHFRPS
Trigger: GCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGTCTGGTATGGGGGCGTaGTCATTCACATCAGACAGG +
Preference number: 3 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWSGMGA*SFTSDR
Trigger: CCTGTCTGATGTGAATGACAACGCCCCCATACCAGA...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR GCA 72 bp TTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTaGAGCTGGCTCAAGTCAAAGTCCTGGTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LRVTSGRASRPL*SWLKSKSWSSS
Trigger: AGAAGAGGACCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 72 bp GGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTaGATTTCCCAGCACATGGGTCTGGGGCCCGCCTCT +
Preference number: 3 (lower is better)
Translates to: GRELKNHQQRDF*ISQHMGLGPAS
Trigger: AGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR GCA 72 bp AATGGCAGGAATTTGCAATCCTGCTTCGACAGGCTGTaGCTTCCTACAGACGCCAGCGGCCCCTTCACAGTC +
Preference number: 3 (lower is better)
Translates to: NGRNLQSCFDRL*LPTDASGPFTV
Trigger: GACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGCAACTGGAGAACCATaGTCTGTAGCTATGATTAGG +
Preference number: 3 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQAATGEP*SVAMIR
Trigger: CCTAATCATAGCTACAGACAATGGTTCTCCAGTTGC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR TCA 72 bp TCTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTaGTTTCTGCATTTCCCAGCACATGGGTCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: SQGKGAEKPPAT*FLHFPAHGSGA
Trigger: GGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR TCA 72 bp TACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTaGCCTCTAAGGTGGTCACTTGGTCTTTATTCTGGT +
Preference number: 3 (lower is better)
Translates to: YRRQRPLHSHTR*PLRWSLGLYSG
Trigger: ACCAGAATAAAGACCAAGTGACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 72 bp GCTATGATTAGGGCTGTGTACGTGCTGTTCTTCACGTaGTCAAAATCCTCCCTGTCCAGCTCAGCCCGAGTG +
Preference number: 3 (lower is better)
Translates to: AMIRAVYVLFFT*SKSSLSSSARV
Trigger: CACTCGGGCTGAGCTGGACAGGGAGGATTTTGAGCACGTGAAGAACAGCACGTACACAGCCCTAATCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
3UTR-3UTR CAA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGGGCAGTAAGGGCTCTTaGACCACCGCTCTCCTCCGA +
Preference number: 3 (lower is better)
Translates to: AAESELAKQEFLQESPEWGSKGS*TTALLR
Trigger: TCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGCC...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp GGTATACGTAGGGAAACTCTCTCGGTCCAGCCCAGTGGTGACCACACTGATGACATGGTGAACATATTTTaGTCAGGGAGCTCAGGATCT +
Preference number: 3 (lower is better)
Translates to: GIRRETLSVQPSGDHTDDMVNIF*SGSSGS
Trigger: AGATCCTGAGCTCCCTGACAAAAATATGTTCACCAT...GTCATCAGTGTGGTCACCACTGGGCTGGACCGAGAGAGTTTCCCTACGTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
3UTR GCA 72 bp AGAATTCCTCCAAGAATCCCCAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGCTGTGCCTTCCTACAG +
Preference number: 3 (lower is better)
Translates to: RIPPRIPRMAGI*NPASTGCAFLQ
Trigger: CTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAAAAAATGGCAGGGAGTaGGGGAGCTGGGCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEKNGRE*GSWAGA
Trigger: TGCACCTGCCCAGCTCCCCAACTCCCTGCCATTTTT...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CAA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGG +
Preference number: 3 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRQNGRN*QSCFDR
Trigger: CCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR TCA 72 bp ATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCTCCAAGCCCACTTTTC +
Preference number: 3 (lower is better)
Translates to: ILSISLLNCQAQ*QALLPSPSPLF
Trigger: GAAAAGTGGGCTTGGAGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CAA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACATCAGTTTGCTAAATaGCCAGGCTCAATGACAAGC +
Preference number: 3 (lower is better)
Translates to: RHLGILGFEYKPRILCQKHQFAK*PGSMTS
Trigger: GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATG...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CCA 72 bp TTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATaGCAGGAATTTGCAATCCTGCTTCGACAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: LAKQEFLQESPE*QEFAILLRQAV
Trigger: CACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCCATCAGTTTGCTAAATaGCCAGGCTCAATGACAAGC +
Preference number: 3 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSHQFAK*PGSMTS
Trigger: GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATG...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CAA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTACAAACCACGGATCTaGTGTCAGAAACACATGTTG +
Preference number: 3 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWYKPRI*CQKHML
Trigger: CAACATGTGTTTCTGACACAAGATCCGTGGTTTGTA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR TCA 72 bp CATCATCAAAAGCAGGCACTTGGGGATTCTGGGCTTTaGGTACAAACCACGGATCTTGTGTCAGAAACACAT +
Preference number: 3 (lower is better)
Translates to: HHQKQALGDSGL*VQTTDLVSETH
Trigger: ATGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCTGCTTTTGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR GCA 72 bp CACTTACTCAGAACAAGTCACTGGATAGCTGCCCATTaGAAGTTACATACTCAGGAGATGAAAGAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: HLLRTSHWIAAH*KLHTQEMKEGS
Trigger: GCTTCCCTCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTTCTGAGTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 72 bp TCACAGTCACACACGCTGACCTCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCCATGAGCTTGAGATTG +
Preference number: 3 (lower is better)
Translates to: SQSHTLTSKVVT*SLFWLSMSLRL
Trigger: CAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTGACCACCTTAGAGGTCAGCGTGTGTGACTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR-3UTR CAA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAATGTCAGCCAGCTTCTaGAAGCGATTGCCCCATTCG +
Preference number: 3 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTMSASF*KRLPHS
Trigger: CGAATGGGGCAATCGCTTCAAGAAGCTGGCTGACAT...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR-3UTR CAA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACACAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGG +
Preference number: 3 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTQNGRN*QSCFDR
Trigger: CCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTG...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR CCA 72 bp GAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTaGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: EPNNFCIRELLS*AKQLNSGVRVD
Trigger: ATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 72 bp TGGAATTTTGAATATTCTCGGTTTTCTGTGCACACCTaGAATTGGGCAAATGTGTTCAGCTCAGCCAGCATT +
Preference number: 3 (lower is better)
Translates to: WNFEYSRFSVHT*NWANVFSSASI
Trigger: AATGCTGGCTGAGCTGAACACATTTGCCCAATTCCAGGTGTGCACAGAAAACCGAGAATATTCAAAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR-3UTR CAA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGACAAAATGATAGATTCTaGGGTTGGGTCGTTGTACTG +
Preference number: 3 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERQNDRF*GWVVVL
Trigger: CAGTACAACGACCCAACCCAAGAATCTATCATTTTG...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
3UTR TCA 72 bp AGTACAAACCACGGATCTTGTGTCAGAAACACATGTTaGGACTCCTCCATTCCTTCCAGAATTTTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: STNHGSCVRNTC*DSSIPSRIFRD
Trigger: ATCTCTGAAAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR TCA 72 bp TTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCACAGAAGAATATAGTT +
Preference number: 3 (lower is better)
Translates to: LGGRSASMMFMT*GFGFLSQKNIV
Trigger: AACTATATTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR GCA 72 bp CACAAACTTCTTACCCTAAAAGAGCCCAATAATTTCTaGATCAGAGAACTCCTATCTTGGGCAAAGCAACTG +
Preference number: 3 (lower is better)
Translates to: HKLLTLKEPNNF*IRELLSWAKQL
Trigger: CAGTTGCTTTGCCCAAGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CCA 72 bp GTGAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTaGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: VRQNSLRKSARC*VNLLMLKLFFW
Trigger: CCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR-3UTR CAA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCCAAAATGATAGATTCTaGGGTTGGGTCGTTGTACTG +
Preference number: 3 (lower is better)
Translates to: HLVFILVIHELEIDFVVTQNDRF*GWVVVL
Trigger: CAGTACAACGACCCAACCCAAGAATCTATCATTTTG...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGCGTCCAGGCCCCTGTaGAGCTGGCTCAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAASRPL*SWLKSK
Trigger: CTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACCAAGGGCCCATGGCTaGCCGGGGACGCCGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTPRAHG*PGTPSE
Trigger: CTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGG...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCCTACAGCCTCCCACGCTaGGGTATTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: TWVWGPPLSSPLVVLAASYSLPR*GIGGIS
Trigger: GCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTA...GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGGCTGGAGTCTGAACTaGCTTCCGCAAGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAGWSLN*LPQAHR
Trigger: CCTGTGAGCTTGCGGAAGTCAGTTCAGACTCCAGCC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR GCA 90 bp ACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCCTGCTTCGACAGGCTGTaGCTTCCTACAGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: TWVWGPPLSSPLVVLAASCFDRL*LPTDAS
Trigger: GCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCA...GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACGGCCTCTCTCCAGGTaGCGCCGGGGCACCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTRPLSR*RRGTVN
Trigger: GTTCACGGTGCCCCGGCGCCACCTGGAGAGAGGCCG...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCACAGGGCTCCGGCTCCTaGCAGAGCCAAGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGAQGSGS*QSQEET
Trigger: GGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTG...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGGTCGTTGTACTGAATaGTCCAGTTGGCACTCGCCC +
Preference number: 4 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAGRCTE*SSWHSP
Trigger: GGGCGAGTGCCAACTGGACCATTCAGTACAACGACC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp ACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCCGTTGGGTCGTTGTACTaGATGGTCCAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: TWVWGPPLSSPLVVLAASVGSLY*MVQLAL
Trigger: GAGTGCCAACTGGACCATTCAGTACAACGACCCAAC...GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTGGCTCCAAGGGCCCATaGCTGGCCGGGGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCGSKGP*LAGDAE
Trigger: CTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCC...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTGCAGCGCCGAGAGGCTaGGGCTCCAAGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCAAPRG*GSKGPW
Trigger: CCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGC...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCATCGTTCTCAGGCACCTaGCCCTTGTACGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGASFSGT*PLYVVG
Trigger: TCCCACCACGTACAAGGGTCAGGTGCCTGAGAACGA...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp GGAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTTGGCAGTGTCTCTCCAGCAGCGCCGAGAGGCTaGGGCTCCAAGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GNGTSVRINLQPVGSVSPAAPRG*GSKGPW
Trigger: CCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGC...TGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTGCGTCAAAGCCAGGGTaGCAGGGCTCCGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCASKPG*QGSGSW
Trigger: CCAGGAGCCGGAGCCCTGCCACCCTGGCTTTGACGC...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCTCGTTCTCAGGCACCTaGCCCTTGTACGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQASFSGT*PLYVVG
Trigger: TCCCACCACGTACAAGGGTCAGGTGCCTGAGAACGA...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGGTTGGGTCGTTGTACTaGATGGTCCAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWVGSLY*MVQLAL
Trigger: GAGTGCCAACTGGACCATTCAGTACAACGACCCAAC...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCTGCTTCGACAGGCTGTaGCTTCCTACAGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVCFDRL*LPTDAS
Trigger: GCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCA...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGGCTCCAAGGGCCCATaGCTGGCCGGGGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIGSKGP*LAGDAE
Trigger: CTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAA +
Preference number: 4 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAAIVVH*ICGDDK
Trigger: TTTGTCGTCACCACAAATCCAGTGAACAACGATGGC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCGCAGTAAGGGCTCTTTaGCCACCGCTCTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAAVRAL*PPLSSE
Trigger: TTCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGC...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGGGGACAAGGGTATaGACAGCTGTGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSQGTRV*TAVRMP
Trigger: TGGCATCCTCACAGCTGTTCATACCCTTGTCCCCTG...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCAAGGGCCCATGGCTaGCCGGGGACGCCGAGCGAG +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRPRAHG*PGTPSE
Trigger: CTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCCCCACGCTGGGGTATTaGGGGCATCAGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAPTLGY*GHQHQS
Trigger: TGACTGATGCTGATGCCCCCAATACCCCAGCGTGGG...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGGTCGGTCGTTGTACTGAATaGTCCAGTTGGCACTCGCCC +
Preference number: 4 (lower is better)
Translates to: LQTPAAPSQSHTLTSKVVGRCTE*SSWHSP
Trigger: GGGCGAGTGCCAACTGGACCATTCAGTACAACGACC...GACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCACTCAAGTCAAAGTCCTaGTCCTCTTCTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGALKSKS*SSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAG...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGGGCGCCGGGGCACCGTaGACGTGTAGCTCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWGAGAP*TCSSRR
Trigger: ACGCCGAGAGCTACACGTTCACGGTGCCCCGGCGCC...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGGTCCATCTGTGCCCACTTTaGATCGGGTGTCGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LQTPAAPSQSHTLTSKVVHLCPL*IGCRGK
Trigger: TTTCCCTCGACACCCGATTCAAAGTGGGCACAGATG...GACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GGTATACGTAGGGAAACTCTCTCGGTCCAGCCCAGTGGTGACCACACTGATGACCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GIRRETLSVQPSGDHTDDPRLWL*PPSQRF
Trigger: GAACCTCTGTGATGGAGGTCACAGCCACAGACGCGG...GTCATCAGTGTGGTCACCACTGGGCTGGACCGAGAGAGTTTCCCTACGTATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp CTCTTTTCAGGAGGCACAAAGATGGGGGCTTCATTCACATCCAGCACATCCACGCCAGCACATCCACGGTaGCGGTGGCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSGGTKMGASFTSSTSTPAHPR*RWLWRW
Trigger: CCACCTCCACAGCCACCGTCACCGTGGATGTGCTGG...CGTGGATGTGCTGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTGAAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACACAGTCACACACGCTaGCCTCTAAGGTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSHSHTR*PLRWSL
Trigger: AAGTGACCACCTTAGAGGTCAGCGTGTGTGACTGTG...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAGGGTATGAACAGCTGTaGGGATGCCAGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGAGYEQL*GCQFLH
Trigger: ATGCAGAAACTGGCATCCTCACAGCTGTTCATACCC...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACTCATGAGGGTTGGTaGAACGTCGTTACGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGATHEGW*NVVTSH
Trigger: GTGACTCGTAACGACGTTGCACCAACCCTCATGAGT...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACTGGAGACGGCCTCTCTCCAGGTaGCGCCGGGGCACCGTGAAC +
Preference number: 4 (lower is better)
Translates to: IHIRQDQQKCPCSSSNWRRPLSR*RRGTVN
Trigger: GTTCACGGTGCCCCGGCGCCACCTGGAGAGAGGCCG...TCTCCAGTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCAACTGAATGGTCCAGTTaGCACTCGCCCCGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSTEWSS*HSPRVL
Trigger: TAACACACGGGGCGAGTGCCAACTGGACCATTCAGT...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp TTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGCAGCTCCTTGGCCAGTaGTGCTGTAGAAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: FLQTPAAPSQSHTLTSKVQLLGQ*CCRKPC
Trigger: GCAAGGTTTTCTACAGCATCACTGGCCAAGGAGCTG...CACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR TCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCATTGGATGACACAGCGTaGGAGAAGAGAGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGALDDTA*EKRVYV
Trigger: CACATACACTCTCTTCTCTCACGCTGTGTCATCCAA...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR TCA 90 bp GTCAGCAGCTTGAACCACCAGGGTATACGTAGGGAAACTCTCTCGGTCCAGCCCGCTCAGGATCTTGGCTaGGGATGGTGTAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: VSSLNHQGIRRETLSVQPAQDLG*GWCKRW
Trigger: CCATCGCTTACACCATCCTCAGCCAAGATCCTGAGC...GGGCTGGACCGAGAGAGTTTCCCTACGTATACCCTGGTGGTTCAAGCTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCCCAGCACATCCACGGTaGCGGTGGCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIPAHPR*RWLWRW
Trigger: CCACCTCCACAGCCACCGTCACCGTGGATGTGCTGG...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACAGTGCTGTTCTTCACGTaGTCAAAATCCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTVLFFT*SKSSLS
Trigger: GGACAGGGAGGATTTTGAGCACGTGAAGAACAGCAC...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp GCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCCCTGTGCAGCTGGCCAGTTTCTGCATCTTaGCAGGTACCATACAAACCT +
Preference number: 4 (lower is better)
Translates to: ATSLRVTSGRASRPLCSWPVSAS*QVPYKP
Trigger: AGGTTTGTATGGTACCTGGCAAGATGCAGAAACTGG...CCAGCTGCACAGGGGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGCGTCAAAGCCAGGGTaGCAGGGCTCCGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRASKPG*QGSGSW
Trigger: CCAGGAGCCGGAGCCCTGCCACCCTGGCTTTGACGC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCCCCTTAAAGACCTCCTaGGTGAATTCGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVPLKTS*VNSGLL
Trigger: CAACAAGCCCGAATTCACCCAGGAGGTCTTTAAGGG...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGGATGGTGTAAGCGATaGCGGCATTGTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQAGWCKR*RHCRCS
Trigger: TGAACACCTACAATGCCGCCATCGCTTACACCATCC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp GGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTCCAGCTCAGCCCGAGTaGAAATGGCACCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GGVVIHIRQDQQKCPCSSPAQPE*KWHQCP
Trigger: CGGACACTGGTGCCATTTCCACTCGGGCTGAGCTGG...ACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCCAATTTCATCGGGATTaGCAGGGCGGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAQFHRD*QGGEDT
Trigger: GGTATCTTCCCCGCCCTGCCAATCCCGATGAAATTG...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCTGGATCTGTGGGTTATaGAACCGTAGAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQAWICGL*NRRGLL
Trigger: CAAAAGGCCTCTACGGTTTCATAACCCACAGATCCA...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCTGTACGTGGTGGGATTaGAGATCGGAGGATTATCGT +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVCTWWD*RSEDYR
Trigger: ACGATAATCCTCCGATCTTCAATCCCACCACGTACA...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGTGTTAGTTCTGCTGTaGAGGGAGATGTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQAVLVLL*REMYWE
Trigger: CTCCCAATACATCTCCCTTCACAGCAGAACTAACAC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCGGGGATTCTGGGCTTTaGGTACAAACCACGGATCTT +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAGDSGL*VQTTDL
Trigger: AAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCC...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCAGCGCCGAGAGGCTaGGGCTCCAAGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPAAPRG*GSKGPW
Trigger: CCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCCAGCTGTTGCTGTTGTaGTTAACCCCTCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVQLLLL*LTPHLE
Trigger: TTCAAGGTGAGGGGTTAAGCACAACAGCAACAGCTG...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTCTGTCTTTGGCTaGAGCACTTTAGGCACTATT +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTRSVFG*STLGTI
Trigger: AATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCG...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAACCAAGGGCCCATGGCTaGCCGGGGACGCCGAGCGAG +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEPRAHG*PGTPSE
Trigger: CTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGG...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGCAGGGCTCCGGCTCCTaGCAGAGCCAAGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWQGSGS*QSQEET
Trigger: GGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTG...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCGCGTCAAAGCCAGGGTaGCAGGGCTCCGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSASKPG*QGSGSW
Trigger: CCAGGAGCCGGAGCCCTGCCACCCTGGCTTTGACGC...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTCGGCCTCTCTCCAGGTaGCGCCGGGGCACCGTGAAC +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPRPLSR*RRGTVN
Trigger: GTTCACGGTGCCCCGGCGCCACCTGGAGAGAGGCCG...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCGAATGTACTGCTGCTTaGCCTCAAAATCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVECTAA*PQNPSP
Trigger: AGGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTC...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp CTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGGTCTTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LQTPAAPSQSHTLTSKVVFHKCV*LLGSVG
Trigger: TCCTACACTGCCCAGGAGCCAGACACATTTATGGAA...GACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGGTCTTCGAGGTTCTGGTATaGGGGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LQTPAAPSQSHTLTSKVVFEVLV*GRCHSH
Trigger: ATGTGAATGACAACGCCCCCATACCAGAACCTCGAA...GACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp GGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGGCCCCTGTGCAGCTaGCTCAAGTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGVVIHIRQDQQKCPCSSRPLCS*LKSKSW
Trigger: CCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCT...ACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAGTTGATATTAAAACATaGAGGCTGGGCACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGAVDIKT*RLGTAA
Trigger: AGCTGCTGTGCCCAGCCTCCATGTTTTAATATCAAC...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGAGCGGGCTGGAGTCTaGACTGACTTCCGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIERAGV*TDFRKL
Trigger: GAGCTTGCGGAAGTCAGTTCAGACTCCAGCCCGCTC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTCATCTGTGCCCACTTTaGATCGGGTGTCGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SDSEEFRELRLAASEPLPHLCPL*IGCRGK
Trigger: TTTCCCTCGACACCCGATTCAAAGTGGGCACAGATG...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CGGTCCAGCCCAGTGGTGACCACACTGATGACTCCTGTGTTCCTGTTAATGGTGCAGCTCCTTGGCCAGTaGTGCTGTAGAAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: RSSPVVTTLMTPVFLLMVQLLGQ*CCRKPC
Trigger: GCAAGGTTTTCTACAGCATCACTGGCCAAGGAGCTG...CACCATTAACAGGAACACAGGAGTCATCAGTGTGGTCACCACTGGGCTGGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCCIPVG*HSVREE
Trigger: CTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCA...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATCACTGGATTTGTGGTaGCGACAAATTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTSLDLW*RQIVHH
Trigger: ATGGTGGACAATTTGTCGTCACCACAAATCCAGTGA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GTGGAGGTGGTGAGAGAGACCTCAAAAGGTACCACATTCGTCACTGCTACGTGTGCAGTAAGGGCTCTTTaGCCACCGCTCTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: VEVVRETSKGTTFVTATCAVRAL*PPLSSE
Trigger: TTCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGC...ACACGTAGCAGTGACGAATGTGGTACCTTTTGAGGTCTCTCTCACCACCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCACCGGGGGACACTCATaGGGGTTGGTGCAACGTCGT +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAITGGHS*GLVQRR
Trigger: ACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGT...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGGTGCAAGGATAGCTTaGGCCTGGGAGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKGARIA*AWEDKA
Trigger: AGCCTTGTCCTCCCAGGCTCAAGCTATCCTTGCACC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCACGTGTAGAATGTACTaGTGCTTGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVTCRMY*CLASKS
Trigger: GGATTTTGAGGCCAAGCAGCAGTACATTCTACACGT...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAATGCTTCGACAGGCTGTaGCTTCCTACAGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKCFDRL*LPTDAS
Trigger: GCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCA...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCAAAACTTTCTGTAGGTaGAGTCCCAGGCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAKTFCR*SPRRRP
Trigger: TGGTCTACGCCTGGGACTCCACCTACAGAAAGTTTT...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GTCAGCAGCTTGAACCACCAGGGTATACGTAGGGAAACTCTCTCGGTCCAGCCCGTGAGCAATTCTGCTTaGATTCCAGAAACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSSLNHQGIRRETLSVQPVSNSA*IPETEA
Trigger: GGCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCAC...GGGCTGGACCGAGAGAGTTTCCCTACGTATACCCTGGTGGTTCAAGCTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAA +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVAIVVH*ICGDDK
Trigger: TTTGTCGTCACCACAAATCCAGTGAACAACGATGGC...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTYSSRF*YGGVVI
Trigger: AATGACAACGCCCCCATACCAGAACCTCGAACTATA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGGCATTTCCCAGCACATaGGTCTGGGGCCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWAFPST*VWGPPL
Trigger: GAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGC...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCGTGCACACCTGGAATTaGGCAAATGTGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAVHTWN*ANVFSS
Trigger: TGAGCTGAACACATTTGCCCAATTCCAGGTGTGCAC...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR TCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRPRLWL*PPSQRF
Trigger: GAACCTCTGTGATGGAGGTCACAGCCACAGACGCGG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTCCAGCACATCCACGGTaGCGGTGGCTGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPPAHPR*RWLWRW
Trigger: CCACCTCCACAGCCACCGTCACCGTGGATGTGCTGG...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGGCAGTAAGGGCTCTTTaGCCACCGCTCTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQAVRAL*PPLSSE
Trigger: TTCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGC...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACACCGGGGGACACTCATaGGGGTTGGTGCAACGTCGT +
Preference number: 4 (lower is better)
Translates to: VVIHIRQDQQKCPCSSSNTGGHS*GLVQRR
Trigger: ACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGT...GTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp CTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGGTCAGTTTGAGGTTACAGTaGGCTATGATCACATCACTG +
Preference number: 4 (lower is better)
Translates to: LQTPAAPSQSHTLTSKVVSLRLQ*AMITSL
Trigger: CAGTGATGTGATCATAGCTCACTGTAACCTCAAACT...GACCACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR TCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCNCQAQ*QALLPS
Trigger: AGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATT...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR GCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCTGTAGAATGTACTGCTaGTTGGCCTCAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQACRMYC*LASKSK
Trigger: CTTGGATTTTGAGGCCAAGCAGCAGTACATTCTACA...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp GTAGCTATGATTAGGGCTGTGTACGTGCTGTTCTTCACGTGCTCAAAATCCTCCGCGTCCAGGCCCCTGTaGAGCTGGCTCAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VAMIRAVYVLFFTCSKSSASRPL*SWLKSK
Trigger: CTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGC...GGAGGATTTTGAGCACGTGAAGAACAGCACGTACACAGCCCTAATCATAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp TTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGTGGATAGCTGCCCATTaGAAGTTACATACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLQTPAAPSQSHTLTSKVWIAAH*KLHTQE
Trigger: CTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCA...CACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR GCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCAAGTCACTGGATAGCTaGCCATTGCAAGTTACATAC +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVKSLDS*PLQVTY
Trigger: GTATGTAACTTGCAATGGGCAGCTATCCAGTGACTT...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTCAACTGCATTCCCGTTaGATGACACAGCGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCQLHSR*MTQRER
Trigger: TCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTG...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGATCAAAATCTCCATTaGATCCTCAACTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQADQNLH*ILNCIP
Trigger: GGGAATGCAGTTGAGGATCCAATGGAGATTTTGATC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp GTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTGGATGGTGTAAGCGATaGCGGCATTGTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VSDGGIVGVHIIVRVCGCGWCKR*RHCRCS
Trigger: TGAACACCTACAATGCCGCCATCGCTTACACCATCC...ACAGCCACAGACGCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCACCCACGCTGGGGTATTaGGGGCATCAGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASPTLGY*GHQHQS
Trigger: TGACTGATGCTGATGCCCCCAATACCCCAGCGTGGG...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGATAGATTCTTGGGTTaGGTCGTTGTACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQADRFLG*VVVLNG
Trigger: ACCATTCAGTACAACGACCCAACCCAAGAATCTATC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp TGTGATTTCCTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGCAATTTCATCGGGATTaGCAGGGCGGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: CDFLAHAKVLGHFHSLFRQFHRD*QGGEDT
Trigger: GGTATCTTCCCCGCCCTGCCAATCCCGATGAAATTG...CCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAGGAAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCCAATTTCATCGGGATTaGCAGGGCGGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPQFHRD*QGGEDT
Trigger: GGTATCTTCCCCGCCCTGCCAATCCCGATGAAATTG...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACAGAGCGGGCTGGAGTCTaGACTGACTTCCGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTERAGV*TDFRKL
Trigger: GAGCTTGCGGAAGTCAGTTCAGACTCCAGCCCGCTC...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR TCA 90 bp CGGTCCAGCCCAGTGGTGACCACACTGATGACTCCTGTGTTCCTGTTAATGGTGTGGATCTGTGGGTTATaGAACCGTAGAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RSSPVVTTLMTPVFLLMVWICGL*NRRGLL
Trigger: CAAAAGGCCTCTACGGTTTCATAACCCACAGATCCA...CACCATTAACAGGAACACAGGAGTCATCAGTGTGGTCACCACTGGGCTGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGCTCAGGATCTTGGCTaGGGATGGTGTAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIAQDLG*GWCKRW
Trigger: CCATCGCTTACACCATCCTCAGCCAAGATCCTGAGC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGGTGCAAGGATAGCTTaGGCCTGGGAGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRGARIA*AWEDKA
Trigger: AGCCTTGTCCTCCCAGGCTCAAGCTATCCTTGCACC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR GCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATGCTGTAGAAAACCTTaGCTTCTTTGTCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTCCRKP*LLCLCW
Trigger: CCAACAAAGACAAAGAAGGCAAGGTTTTCTACAGCA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR GCA 90 bp GTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTCAGCTGTTGCTGTTGTaGTTAACCCCTCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSDGGIVGVHIIVRVCGCQLLLL*LTPHLE
Trigger: TTCAAGGTGAGGGGTTAAGCACAACAGCAACAGCTG...ACAGCCACAGACGCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR GCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTTTAGGGCTGTGTACGTaGTGTTCTTCACGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCLGLCT*CSSRAQ
Trigger: TTGAGCACGTGAAGAACAGCACGTACACAGCCCTAA...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTGAGGATGCCAGTTTCTaGATCTTGCCAGGTACCATA +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCEDASF*ILPGTI
Trigger: TATGGTACCTGGCAAGATGCAGAAACTGGCATCCTC...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp GCTGAGGATGGTGTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCAAAACTTTCTGTAGGTaGAGTCCCAGGCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: AEDGVSDGGIVGVHIIVRKTFCR*SPRRRP
Trigger: TGGTCTACGCCTGGGACTCCACCTACAGAAAGTTTT...GCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTACACCATCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CCA 90 bp GGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTCATCACAGAGGTTCCTaGAAGAGCACCTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: GGVVIHIRQDQQKCPCSSHHRGS*KSTFHD
Trigger: GTCATGGAAGGTGCTCTTCCAGGAACCTCTGTGATG...ACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCCAGGAGGCACAAAGATaGGGGCTTCATTCACATCCA +
Preference number: 4 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPQEAQR*GLHSHP
Trigger: TGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTG...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCCCAGCTCAGCCCGAGTaGAAATGGCACCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSPAQPE*KWHQCP
Trigger: CGGACACTGGTGCCATTTCCACTCGGGCTGAGCTGG...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTSKVVT*SLFWLS
Trigger: GGATAACCAGAATAAAGACCAAGTGACCACCTTAGA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCCCAGCACATGGGTCTaGGGCCCGCCTCTCTCGAGT +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAPSTWV*GPPLSS
Trigger: ACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GGAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTTGGCAGTGTCTCTCCATGGATCTGTGGGTTATaGAACCGTAGAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GNGTSVRINLQPVGSVSPWICGL*NRRGLL
Trigger: CAAAAGGCCTCTACGGTTTCATAACCCACAGATCCA...TGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp GCTGAGGATGGTGTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCCCACTGTATTCAGCGTaGCTTTGGTGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: AEDGVSDGGIVGVHIIVRPLYSA*LWWKTF
Trigger: GAAAGTTTTCCACCAAAGTCACGCTGAATACAGTGG...GCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTACACCATCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp GTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTGTAAGCGATGGCGGCATTGTAAGGAGTTGGGAAATGTaGGCAATTCTGCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: VRELRILAEDGVSDGGIVRSWEM*AILLGF
Trigger: GAATCCAAGCAGAATTGCTCACATTTCCCAACTCCT...TACAATGCCGCCATCGCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPPRLWL*PPSQRF
Trigger: GAACCTCTGTGATGGAGGTCACAGCCACAGACGCGG...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCCCGCAAGCTCACAGGTaGTTTGCAGTTCCGACGCCA +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSPQAHR*FAVPTP
Trigger: TGGCGTCGGAACTGCAAAGCACCTGTGAGCTTGCGG...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGTGCTGTTCTTCACGTaGTCAAAATCCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKVLFFT*SKSSLS
Trigger: GGACAGGGAGGATTTTGAGCACGTGAAGAACAGCAC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp TGTGATTTCCTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGC +
Preference number: 4 (lower is better)
Translates to: CDFLAHAKVLGHFHSLFRRMAGI*NPASTG
Trigger: GCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCT...CCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAGGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCCAGCAACGTGATTTCTaGATTTCCCAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPQQRDF*ISQHMG
Trigger: ACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTG...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp GTGGAGGTGGTGAGAGAGACCTCAAAAGGTACCACATTCGTCACTGCTACGTGTCCCTTAAAGACCTCCTaGGTGAATTCGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VEVVRETSKGTTFVTATCPLKTS*VNSGLL
Trigger: CAACAAGCCCGAATTCACCCAGGAGGTCTTTAAGGG...ACACGTAGCAGTGACGAATGTGGTACCTTTTGAGGTCTCTCTCACCACCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTTATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: SDSEEFRELRLAASEPLPYSSRF*YGGVVI
Trigger: AATGACAACGCCCCCATACCAGAACCTCGAACTATA...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGACTGAATGGTCCAGTTaGCACTCGCCCCGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQTEWSS*HSPRVL
Trigger: TAACACACGGGGCGAGTGCCAACTGGACCATTCAGT...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKDTHEG*CNVVTS
Trigger: ACTCGTAACGACGTTGCACCAACCCTCATGAGTGTC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAGCATTTCCCAGCACATaGGTCTGGGGCCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERAFPST*VWGPPL
Trigger: GAGAGGCGGGCCCCAGACCCATGTGCTGGGAAATGC...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCCACTATTCTAAGTCCTaGAGTATATCACTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVHYSKS*SISLLL
Trigger: AAGCAAGAGTGATATACTCCAGGACTTAGAATAGTG...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGGTTCCGCTCTGTCTTTaGCTGCAGCACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQVPLCL*LQHFRH
Trigger: GTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAAC...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCTGTTCCAGTAGCAACTaGAGAACGTTATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQACSSSN*RTLFSV
Trigger: AACAGAAAATAACGTTCTCCAGTTGCTACTGGAACA...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp TGTGATTTCCTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGGAATGTACTGCTGCTTaGCCTCAAAATCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CDFLAHAKVLGHFHSLFRECTAA*PQNPSP
Trigger: TGGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTC...CCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAGGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp GGAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTTGGCAGTGTCTCTCCAAGGAGTTGGGAAATGTaGGCAATTCTGCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: GNGTSVRINLQPVGSVSPRSWEM*AILLGF
Trigger: GAATCCAAGCAGAATTGCTCACATTTCCCAACTCCT...TGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAATTGGATGACACAGCGTaGGAGAAGAGAGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKLDDTA*EKRVYV
Trigger: CACATACACTCTCTTCTCTCACGCTGTGTCATCCAA...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAATGTACGTGGTGGGATTaGAGATCGGAGGATTATCGT +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKCTWWD*RSEDYR
Trigger: ACGATAATCCTCCGATCTTCAATCCCACCACGTACA...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGGGGCAGTGTAGGATGTaGTTTCCTGGCCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWGQCRM*FPGPRQ
Trigger: TTGGCGTGGGCCAGGAAATCACATCCTACACTGCCC...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SDSEEFRELRLAASEPLPMMFMT*GFGFLS
Trigger: TGAGAGGAATCCAAAGCCTCAGGTCATAAACATCAT...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAACCGGGGGACACTCATaGGGGTTGGTGCAACGTCGT +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLETGGHS*GLVQRR
Trigger: ACGACGTTGCACCAACCCTCATGAGTGTCCCCCGGT...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGAATTGCCAGGCTCAATaGCAAGCTCTCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQNCQAQ*QALLPS
Trigger: AGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATT...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGTCAGAAACACATGTTaGGACTCCTCCATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKVRNTC*DSSIPS
Trigger: GGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGAC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGGGGGATTCTGGGCTTTaGGTACAAACCACGGATCTT +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQGDSGL*VQTTDL
Trigger: AAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCC...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCSFVDR*NLQNSL
Trigger: GAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGA...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp TGTGATTTCCTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGACGTGTAGAATGTACTaGTGCTTGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: CDFLAHAKVLGHFHSLFRTCRMY*CLASKS
Trigger: GGATTTTGAGGCCAAGCAGCAGTACATTCTACACGT...CCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAGGAAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp CTCTTTTCAGGAGGCACAAAGATGGGGGCTTCATTCACATCCAGCACATCCACGAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LFSGGTKMGASFTSSTSTRNLQS*FDRLCL
Trigger: AAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCT...CGTGGATGTGCTGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTGAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp AATGTGTTCAGCTCAGCCAGCATTTTCTGTAGACATCATCAAAAGCAGGCACTTGCGTCCAGGCCCCTGTaGAGCTGGCTCAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: NVFSSASIFCRHHQKQALASRPL*SWLKSK
Trigger: CTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGC...AAGTGCCTGCTTTTGATGATGTCTACAGAAAATGCTGGCTGAGCTGAACACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACACAGGGCTCCGGCTCCTaGCAGAGCCAAGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTQGSGS*QSQEET
Trigger: GGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTG...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAAAAACTTTCTGTAGGTaGAGTCCCAGGCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKKTFCR*SPRRRP
Trigger: TGGTCTACGCCTGGGACTCCACCTACAGAAAGTTTT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGTGAGCAATTCTGCTTaGATTCCAGAAACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIVSNSA*IPETEA
Trigger: GGCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCAC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGCAACTGCATTCCCGTTaGATGACACAGCGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQQLHSR*MTQRER
Trigger: TCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTG...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGATACAGCCTCCCACGCTaGGGTATTGGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERYSLPR*GIGGIS
Trigger: GCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTA...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCACTTGGTCTTTATTCTaGTTATCCATGAGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPATWSLF*LSMSLR
Trigger: TCTCAAGCTCATGGATAACCAGAATAAAGACCAAGT...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTTACCTAGTCAAGATGTaGCCAGACAAAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: SDSEEFRELRLAASEPLPYLVKM*PDKDTN
Trigger: GTTTGTGTCTTTGTCTGGCCACATCTTGACTAGGTA...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGTTCCGCTCTGTCTTTaGCTGCAGCACTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRVPLCL*LQHFRH
Trigger: GTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAAC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp ATTTTTGTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTGTAAGCGATGGCGGCGAGGTTCAGTGTATGTaGCAATGCGTTCTCTATCCA +
Preference number: 4 (lower is better)
Translates to: IFVRELRILAEDGVSDGGEVQCM*QCVLYP
Trigger: TGGATAGAGAACGCATTGCCACATACACTGAACCTC...GCCGCCATCGCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCTGACAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561751.1
3UTR CAA 72 bp ACCCACCTCAATCATCCTCAGCATCAGTTTGCTAAATaGCCAGGCTCAATGACAAGCTCTCCTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: THLNHPQHQFAK*PGSMTSSPAIS
Trigger: GGAGATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACATGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTCIPVG*HSVREE
Trigger: CTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCA...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR TCA 90 bp GGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTTCTGATCGGTTACCGTaGTCAAAATCTCCATTGGAT +
Preference number: 4 (lower is better)
Translates to: GGVVIHIRQDQQKCPCSSSDRLP*SKSPLD
Trigger: ATCCAATGGAGATTTTGATCACGGTAACCGATCAGA...ACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCTCTGATCGGTTACCGTaGTCAAAATCTCCATTGGAT +
Preference number: 4 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPSDRLP*SKSPLD
Trigger: ATCCAATGGAGATTTTGATCACGGTAACCGATCAGA...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGGCTCAGGATCTTGGCTaGGGATGGTGTAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWAQDLG*GWCKRW
Trigger: CCATCGCTTACACCATCCTCAGCCAAGATCCTGAGC...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCATGTACGTGGTGGGATTaGAGATCGGAGGATTATCGT +
Preference number: 4 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASCTWWD*RSEDYR
Trigger: ACGATAATCCTCCGATCTTCAATCCCACCACGTACA...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AATGTGTTCAGCTCAGCCAGCATTTTCTGTAGACATCATCAAAAGCAGGCACTTTCGTTCTCAGGCACCTaGCCCTTGTACGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NVFSSASIFCRHHQKQALSFSGT*PLYVVG
Trigger: TCCCACCACGTACAAGGGTCAGGTGCCTGAGAACGA...AAGTGCCTGCTTTTGATGATGTCTACAGAAAATGCTGGCTGAGCTGAACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR TCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGGGCAGTGTAGGATGTaGTTTCCTGGCCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFGQCRM*FPGPRQ
Trigger: TTGGCGTGGGCCAGGAAATCACATCCTACACTGCCC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGGTTACAGTGAGCTATaGTCACATCACTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIGYSEL*SHHCIP
Trigger: TGGGATGCAGTGATGTGATCATAGCTCACTGTAACC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGGTGGGAGAACTGCTTaGGCCCCAGAGTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPGGRTA*APEFEV
Trigger: AACCTCAAACTCTGGGGCTCAAGCAGTTCTCCCACC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp GTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTTGCTGTAGAAAACCTTaGCTTCTTTGTCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VSDGGIVGVHIIVRVCGCCCRKP*LLCLCW
Trigger: CCAACAAAGACAAAGAAGGCAAGGTTTTCTACAGCA...ACAGCCACAGACGCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR GCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGC +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQRMAGI*NPASTG
Trigger: GCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCT...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAAGAAAATCTGCAAGGTaGTGGGTGAACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKRKSAR*WVNLLM
Trigger: CATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGCGCTCTGTCTTTGGCTaGAGCACTTTAGGCACTATT +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQRSVFG*STLGTI
Trigger: AATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCG...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCCGATATAGCTTGAACTaGCGAAAAATCAAGACAATT +
Preference number: 4 (lower is better)
Translates to: NHQQRDFCISQHMGLGPARYSLN*RKIKTI
Trigger: AATTGTCTTGATTTTTCGGCAGTTCAAGCTATATCG...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp TCACAGCTGTTGCTGTTGTGCTTAACCCCTCACCTTGAAGGTCAGCAGCTTGAACAGTGTATGTGGCAATaGGTTCTCTATCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SQLLLLCLTPHLEGQQLEQCMWQ*VLYPEA
Trigger: AGCCTCTGGATAGAGAACGCATTGCCACATACACTG...TTCAAGCTGCTGACCTTCAAGGTGAGGGGTTAAGCACAACAGCAACAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGTGAGCAATTCTGCTTaGATTCCAGAAACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRVSNSA*IPETEA
Trigger: GGCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCAC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGGTGAGCAATTCTGCTTaGATTCCAGAAACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWVSNSA*IPETEA
Trigger: GGCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCAC...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGCCCTTAAAGACCTCCTaGGTGAATTCGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWPLKTS*VNSGLL
Trigger: CAACAAGCCCGAATTCACCCAGGAGGTCTTTAAGGG...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGCATCACAGAGGTTCCTaGAAGAGCACCTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWHHRGS*KSTFHD
Trigger: GTCATGGAAGGTGCTCTTCCAGGAACCTCTGTGATG...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAA +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKAIVVH*ICGDDK
Trigger: TTTGTCGTCACCACAAATCCAGTGAACAACGATGGC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCAGGAGGCACAAAGATaGGGGCTTCATTCACATCCA +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRQEAQR*GLHSHP
Trigger: TGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTG...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCCTCAAGTCAAAGTCCTaGTCCTCTTCTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSLKSKS*SSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAG...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAAGGCCCCTGTGCAGCTaGCTCAAGTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLERPLCS*LKSKSW
Trigger: CCAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCT...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTCCCAGCACATGGGTCTaGGGCCCGCCTCTCTCGAGT +
Preference number: 4 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIPSTWV*GPPLSS
Trigger: ACTCGAGAGAGGCGGGCCCCAGACCCATGTGCTGGG...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAAAATCTGCAAGGTGCTaGGTGAACCTTCTGATGCTA +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKKSARC*VNLLML
Trigger: TAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAAGTAATCCCAATACTCTaGGAGGCCAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RHLGILGFEYKPRILCQKVIPIL*EAKMGG
Trigger: TCCTCCCATCTTGGCCTCCCAGAGTATTGGGATTAC...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CAA 72 bp GCCCCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATaGGGAGGAAGGTCTGCATCAATGATGTTTATGACC +
Preference number: 4 (lower is better)
Translates to: APCVSSAVKGDV*GGRSASMMFMT
Trigger: GGTCATAAACATCATTGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CAA 72 bp AAGAATTCCTCCAAGAATCCCCAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: KNSSKNPQNGRN*QSCFDRLCLPT
Trigger: TGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTGGGGATTCTTGGAGGAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCAGGAGTTGGGAAATGTaGGCAATTCTGCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIRSWEM*AILLGF
Trigger: GAATCCAAGCAGAATTGCTCACATTTCCCAACTCCT...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWCIPVG*HSVREE
Trigger: CTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCA...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: HLVFILVIHELEIDFVVTPRLWL*PPSQRF
Trigger: GAACCTCTGTGATGGAGGTCACAGCCACAGACGCGG...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGCTCAGGATCTTGGCTaGGGATGGTGTAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAAQDLG*GWCKRW
Trigger: CCATCGCTTACACCATCCTCAGCCAAGATCCTGAGC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAGGACAAGGCTGCAGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDARTRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGCAGCCTTGTCCT...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAGGACAAGGCTGCAGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFRTRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGCAGCCTTGTCCT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCAGAATGGCAGGAATTTaGAATCCTGCTTCGACAGGC +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRRMAGI*NPASTG
Trigger: GCCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCT...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGATTCTCGGTTTTCTGTaGACACCTGGAATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQILGFL*TPGIGQ
Trigger: TTGCCCAATTCCAGGTGTGCACAGAAAACCGAGAAT...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp GTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTAGCAACAAAACTTTCTGTAGGTaGAGTCCCAGGCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: VVIHIRQDQQKCPCSSSNKTFCR*SPRRRP
Trigger: TGGTCTACGCCTGGGACTCCACCTACAGAAAGTTTT...GTTGCTACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAGATCAAAATCTCCATTaGATCCTCAACTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: DHITASQAWAMERNCLLKDQNLH*ILNCIP
Trigger: GGGAATGCAGTTGAGGATCCAATGGAGATTTTGATC...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CTCTTTTCAGGAGGCACAAAGATGGGGGCTTCATTCACATCCAGCACATCCACGCATCATCATTCAATATaGTGTATACAGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: LFSGGTKMGASFTSSTSTHHHSI*CIQPPT
Trigger: CGTGGGAGGCTGTATACACCATATTGAATGATGATG...CGTGGATGTGCTGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTGAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGGAATGTACTGCTGCTTaGCCTCAAAATCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWECTAA*PQNPSP
Trigger: AGGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTC...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGGTCGTTGTACTGAATaGTCCAGTTGGCACTCGCCC +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAGRCTE*SSWHSP
Trigger: GGGCGAGTGCCAACTGGACCATTCAGTACAACGACC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGCTCAAGTCAAAGTCCTaGTCCTCTTCTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWLKSKS*SSSPPP
Trigger: AGGAGGCGGAGAAGAGGACCAGGACTTTGACTTGAG...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAAAATCTGCAAGGTGCTaGGTGAACCTTCTGATGCTA +
Preference number: 4 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASKSARC*VNLLML
Trigger: TAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTT...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAGGCTGGAGTCTGAACTaGCTTCCGCAAGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTGWSLN*LPQAHR
Trigger: CCTGTGAGCTTGCGGAAGTCAGTTCAGACTCCAGCC...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AATGTGTTCAGCTCAGCCAGCATTTTCTGTAGACATCATCAAAAGCAGGCACTTCATCTGTGCCCACTTTaGATCGGGTGTCGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: NVFSSASIFCRHHQKQALHLCPL*IGCRGK
Trigger: TTTCCCTCGACACCCGATTCAAAGTGGGCACAGATG...AAGTGCCTGCTTTTGATGATGTCTACAGAAAATGCTGGCTGAGCTGAACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR TCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGCAGCTCCTTGGCCAGTaGTGCTGTAGAAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLQLLGQ*CCRKPC
Trigger: GCAAGGTTTTCTACAGCATCACTGGCCAAGGAGCTG...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCATGATGTTTATGACCTaGGGCTTTGGATTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIMMFMT*GFGFLS
Trigger: TGAGAGGAATCCAAAGCCTCAGGTCATAAACATCAT...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGTTGGGTCGTTGTACTaGATGGTCCAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLVGSLY*MVQLAL
Trigger: GAGTGCCAACTGGACCATTCAGTACAACGACCCAAC...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGACACAGTCACACACGCTaGCCTCTAAGGTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERHSHTR*PLRWSL
Trigger: AAGTGACCACCTTAGAGGTCAGCGTGTGTGACTGTG...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTCTTCAAAATTCACTCTaGCCAGGACGCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFLQNSL*PGRGLS
Trigger: AGAGAGGCCGCGTCCTGGGCAGAGTGAATTTTGAAG...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAISFVDR*NLQNSL
Trigger: GAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGA...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp GTGGAGGTGGTGAGAGAGACCTCAAAAGGTACCACATTCGTCACTGCTACGTGTAAATGTGAGCAATTCTaGTTGGATTCCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: VEVVRETSKGTTFVTATCKCEQF*LDSRNG
Trigger: TCCGTTTCTGGAATCCAAGCAGAATTGCTCACATTT...ACACGTAGCAGTGACGAATGTGGTACCTTTTGAGGTCTCTCTCACCACCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR GCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTACTCATGAGGGTTGGTaGAACGTCGTTACGAGTCAC +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPTHEGW*NVVTSH
Trigger: GTGACTCGTAACGACGTTGCACCAACCCTCATGAGT...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGTTCCTTAAGAAAATCTaGAAGGTGCTGGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: LKGRELKNHQQRDFCISQFLKKI*KVLGEP
Trigger: AGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAA...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTGGATAGCTGCCCATTaGAAGTTACATACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWWIAAH*KLHTQE
Trigger: CTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGAGGCACAAATACCATACAAACCTTTaGTGTTTTCAAAATGCCATC +
Preference number: 4 (lower is better)
Translates to: LAHAKVLGHFHSLFRRHKYHTNL*CFQNAI
Trigger: GATGGCATTTTGAAAACAGCAAAGGTTTGTATGGTA...TTTGTGCCTCCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTCATCACAGAGGTTCCTaGAAGAGCACCTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPHHRGS*KSTFHD
Trigger: GTCATGGAAGGTGCTCTTCCAGGAACCTCTGTGATG...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGGATGGTGTAAGCGATaGCGGCATTGTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPGWCKR*RHCRCS
Trigger: TGAACACCTACAATGCCGCCATCGCTTACACCATCC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACACCCACGCTGGGGTATTaGGGGCATCAGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTPTLGY*GHQHQS
Trigger: TGACTGATGCTGATGCCCCCAATACCCCAGCGTGGG...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCCATCATCATTCAATATaGTGTATACAGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIHHHSI*CIQPPT
Trigger: CGTGGGAGGCTGTATACACCATATTGAATGATGATG...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTGAGGTTCGAGGTTCTGGTATaGGGGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: EGRCIGRKVCINDVYDLRFEVLV*GRCHSH
Trigger: ATGTGAATGACAACGCCCCCATACCAGAACCTCGAA...CCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAATACATCTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTACTGAATGGTCCAGTTaGCACTCGCCCCGTGTGTTA +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFTEWSS*HSPRVL
Trigger: TAACACACGGGGCGAGTGCCAACTGGACCATTCAGT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGGTAATCCCAATACTCTaGGAGGCCAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWVIPIL*EAKMGG
Trigger: TCCTCCCATCTTGGCCTCCCAGAGTATTGGGATTAC...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCTACCTAGTCAAGATGTaGCCAGACAAAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIYLVKM*PDKDTN
Trigger: GTTTGTGTCTTTGTCTGGCCACATCTTGACTAGGTA...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACACTCAGAACAAGTCACTaGATAGCTGCCCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTLRTSH*IAAHCK
Trigger: CTTGCAATGGGCAGCTATCCAGTGACTTGTTCTGAG...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCTTTTCTGTGCACACCTaGAATTGGGCAAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIFSVHT*NWANVF
Trigger: GAACACATTTGCCCAATTCCAGGTGTGCACAGAAAA...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CAA 72 bp TTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTaGTGTCAGAAACACATGTTGAGACTCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: LGILGFEYKPRI*CQKHMLRLLHS
Trigger: GGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CAA 72 bp AATGGTGAACATATTTTTGTCAGGGAGCTCAGGATCTaGGCTGAGGATGGTGTAAGCGATGGCGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: NGEHIFVRELRI*AEDGVSDGGIV
Trigger: TACAATGCCGCCATCGCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCTGACAAAAATATGTTCACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561751.1
3UTR CAA 72 bp CAGAAGAATATAGTTCGAGGTTCTGGTATGGGGGCGTaGTCATTCACATCAGACAGGATCAGCAGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: QKNIVRGSGMGA*SFTSDRISRSV
Trigger: GACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCCATACCAGAACCTCGAACTATATTCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTGGATCTGTGGGTTATaGAACCGTAGAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPWICGL*NRRGLL
Trigger: CAAAAGGCCTCTACGGTTTCATAACCCACAGATCCA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCAGGAGTTGGGAAATGTaGGCAATTCTGCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSRSWEM*AILLGF
Trigger: GAATCCAAGCAGAATTGCTCACATTTCCCAACTCCT...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTGGGCAGTGTAGGATGTaGTTTCCTGGCCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIGQCRM*FPGPRQ
Trigger: TTGGCGTGGGCCAGGAAATCACATCCTACACTGCCC...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGTGTTAGTTCTGCTGTaGAGGGAGATGTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPVLVLL*REMYWE
Trigger: CTCCCAATACATCTCCCTTCACAGCAGAACTAACAC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAGGTGGGAGAACTGCTTaGGCCCCAGAGTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTGGRTA*APEFEV
Trigger: AACCTCAAACTCTGGGGCTCAAGCAGTTCTCCCACC...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCAAATGTGAGCAATTCTaGTTGGATTCCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIKCEQF*LDSRNG
Trigger: TCCGTTTCTGGAATCCAAGCAGAATTGCTCACATTT...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWRNLQS*FDRLCL
Trigger: AAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCT...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAACTCATGAGGGTTGGTaGAACGTCGTTACGAGTCAC +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERTHEGW*NVVTSH
Trigger: GTGACTCGTAACGACGTTGCACCAACCCTCATGAGT...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCGAGCCCAATAATTTCTaGATCAGAGAACTCCTATCT +
Preference number: 4 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIEPNNF*IRELLS
Trigger: AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTC...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAAAGAAGAGAGTGTATGTaGCAATGCGTTCTCTATCCA +
Preference number: 4 (lower is better)
Translates to: RHLGILGFEYKPRILCQKRRECM*QCVLYP
Trigger: TGGATAGAGAACGCATTGCCACATACACTCTCTTCT...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp AATGATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCGATCAAAATCTCCATTaGATCCTCAACTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: NDRFLGWVVVLNGPVGTRDQNLH*ILNCIP
Trigger: GGGAATGCAGTTGAGGATCCAATGGAGATTTTGATC...GCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAGGATGGTGTAAGCGATaGCGGCATTGTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEGWCKR*RHCRCS
Trigger: TGAACACCTACAATGCCGCCATCGCTTACACCATCC...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCAGGAGGCACAAAGATaGGGGCTTCATTCACATCCA +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAQEAQR*GLHSHP
Trigger: TGGATGTGAATGAAGCCCCCATCTTTGTGCCTCCTG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTTCGAGGTTCTGGTATaGGGGCGTTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPFEVLV*GRCHSH
Trigger: ATGTGAATGACAACGCCCCCATACCAGAACCTCGAA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GTAGCTATGATTAGGGCTGTGTACGTGCTGTTCTTCACGTGCTCAAAATCCTCCTATGACCTGAGGCTTTaGATTCCTCTCACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VAMIRAVYVLFFTCSKSSYDLRL*IPLTEE
Trigger: TTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATA...GGAGGATTTTGAGCACGTGAAGAACAGCACGTACACAGCCCTAATCATAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDADTHEG*CNVVTS
Trigger: ACTCGTAACGACGTTGCACCAACCCTCATGAGTGTC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAGGCACTTGGGGATTCTaGGCTTTGAGTACAAACCAC +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEGTWGF*ALSTNH
Trigger: GTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCC...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTCAAAAGCAGGCACTTaGGGATTCTGGGCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPSKAGT*GFWALS
Trigger: ACTCAAAGCCCAGAATCCCCAAGTGCCTGCTTTTGA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CAA 72 bp ACATCATCAAAAGCAGGCACTTGGGGATTCTGGGCTTaGAGTACAAACCACGGATCTTGTGTCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: TSSKAGTWGFWA*STNHGSCVRNT
Trigger: TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCTGCTTTTGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
3UTR CAA 72 bp GAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTaGGCAGTGTCTCTCCAAATCCGATATGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: EMAPVSGLISSQ*AVSLQIRYVIF
Trigger: GAAAATAACATATCGGATTTGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR TCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGCCACTGTATTCAGCGTaGCTTTGGTGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWPLYSA*LWWKTF
Trigger: GAAAGTTTTCCACCAAAGTCACGCTGAATACAGTGG...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGTCACTGGATTTGTGGTaGCGACAAATTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: AAESELAKQEFLQESPEWSLDLW*RQIVHH
Trigger: ATGGTGGACAATTTGTCGTCACCACAAATCCAGTGA...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR TCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAGTGTTAGTTCTGCTGTaGAGGGAGATGTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEVLVLL*REMYWE
Trigger: CTCCCAATACATCTCCCTTCACAGCAGAACTAACAC...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAGGTTACAGTGAGCTATaGTCACATCACTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERGYSEL*SHHCIP
Trigger: TGGGATGCAGTGATGTGATCATAGCTCACTGTAACC...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTGTCAGAAACACATGTTaGGACTCCTCCATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAVRNTC*DSSIPS
Trigger: GGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGAC...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGCACTCAAAACTACAGTaGCATTCTCTACACAGAACT +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWHSKLQ*HSLHRT
Trigger: AGTTCTGTGTAGAGAATGTCACTGTAGTTTTGAGTG...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp GAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTGAGGTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: EGRCIGRKVCINDVYDLRSFVDR*NLQNSL
Trigger: GAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGA...CCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAATACATCTCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp TTATCGTTGGTGTCAGTGACTGTGATCACAGCTGTTGCTGTTGTGCTTAACCCCAAATGTGAGCAATTCTaGTTGGATTCCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LSLVSVTVITAVAVVLNPKCEQF*LDSRNG
Trigger: TCCGTTTCTGGAATCCAAGCAGAATTGCTCACATTT...GGGGTTAAGCACAACAGCAACAGCTGTGATCACAGTCACTGACACCAACGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR GCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGAAATGTGAGCAATTCTaGTTGGATTCCAGAAACGGA +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWKCEQF*LDSRNG
Trigger: TCCGTTTCTGGAATCCAAGCAGAATTGCTCACATTT...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AATGTGTTCAGCTCAGCCAGCATTTTCTGTAGACATCATCAAAAGCAGGCACTTGAGTGTATGTGGCAATaGGTTCTCTATCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NVFSSASIFCRHHQKQALECMWQ*VLYPEA
Trigger: AGCCTCTGGATAGAGAACGCATTGCCACATACACTC...AAGTGCCTGCTTTTGATGATGTCTACAGAAAATGCTGGCTGAGCTGAACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAACAGCTGTTGCTGTTGTaGTTAACCCCTCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEQLLLL*LTPHLE
Trigger: TTCAAGGTGAGGGGTTAAGCACAACAGCAACAGCTG...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGATTAGGGCTGTGTACGTaGTGTTCTTCACGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERLGLCT*CSSRAQ
Trigger: TTGAGCACGTGAAGAACAGCACGTACACAGCCCTAA...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAAGGAATTTGCAATCCTaGTTCGACAGGCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERRNLQS*FDRLCL
Trigger: AAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCT...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGGAGCCCAATAATTTCTaGATCAGAGAACTCCTATCT +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWEPNNF*IRELLS
Trigger: AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTC...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAATGACAAGCTCTCCTaGCATCTCCAAGCCCACTTT +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFNDKLS*HLQAHF
Trigger: AAAGTGGGCTTGGAGATGGCAGGAGAGCTTGTCATT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAAATGACAAGCTCTCCTaGCATCTCCAAGCCCACTTT +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERNDKLS*HLQAHF
Trigger: AAAGTGGGCTTGGAGATGGCAGGAGAGCTTGTCATT...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACACATCATCATTCAATATaGTGTATACAGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTHHHSI*CIQPPT
Trigger: CGTGGGAGGCTGTATACACCATATTGAATGATGATG...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTTTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFFHKCV*LLGSVG
Trigger: TCCTACACTGCCCAGGAGCCAGACACATTTATGGAA...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTATAGTTCGAGGTTCTaGTATGGGGGCGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPYSSRF*YGGVVI
Trigger: AATGACAACGCCCCCATACCAGAACCTCGAACTATA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWSKVVT*SLFWLS
Trigger: GGATAACCAGAATAAAGACCAAGTGACCACCTTAGA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTTCACTGGATTTGTGGTaGCGACAAATTGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDASLDLW*RQIVHH
Trigger: ATGGTGGACAATTTGTCGTCACCACAAATCCAGTGA...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTTGTTCCAGTAGCAACTaGAGAACCATTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFCSSSN*RTIVCS
Trigger: GCTACAGACAATGGTTCTCCAGTTGCTACTGGAACA...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CCA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGATAGATTCTTGGGTTaGGTCGTTGTACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPDRFLG*VVVLNG
Trigger: ACCATTCAGTACAACGACCCAACCCAAGAATCTATC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCGACACTCATGAGGGTTaGTGCAACGTCGTTACGAGT +
Preference number: 4 (lower is better)
Translates to: HLVFILVIHELEIDFVVTDTHEG*CNVVTS
Trigger: ACTCGTAACGACGTTGCACCAACCCTCATGAGTGTC...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTGTTGATATTAAAACATaGAGGCTGGGCACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFVDIKT*RLGTAA
Trigger: AGCTGCTGTGCCCAGCCTCCATGTTTTAATATCAAC...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
3UTR CAA 72 bp GAGTACAAACCACGGATCTTGTGTCAGAAACACATGTaGAGACTCCTCCATTCCTTCCAGAATTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EYKPRILCQKHM*RLLHSFQNFQR
Trigger: TCTCTGAAAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGTGGTTTGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGTCTGATCGGTTACCGTaGTCAAAATCTCCATTGGAT +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLSDRLP*SKSPLD
Trigger: ATCCAATGGAGATTTTGATCACGGTAACCGATCAGA...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTTTCCTTAAGAAAATCTaGAAGGTGCTGGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFFLKKI*KVLGEP
Trigger: AGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAA...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAAAGTCACTGGATAGCTaGCCATTGCAAGTTACATAC +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLEKSLDS*PLQVTY
Trigger: GTATGTAACTTGCAATGGGCAGCTATCCAGTGACTT...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAGAAGAGAGTGTATGTaGCAATGCGTTCTCTATCCA +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFRRECM*QCVLYP
Trigger: TGGATAGAGAACGCATTGCCACATACACTCTCTTCT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGTATGACCTGAGGCTTTaGATTCCTCTCACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLYDLRL*IPLTEE
Trigger: TTCTTCTGTGAGAGGAATCCAAAGCCTCAGGTCATA...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGATAGATTCTTGGGTTaGGTCGTTGTACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLDRFLG*VVVLNG
Trigger: ACCATTCAGTACAACGACCCAACCCAAGAATCTATC...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCCCACTGTATTCAGCGTaGCTTTGGTGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: HLVFILVIHELEIDFVVTPLYSA*LWWKTF
Trigger: GAAAGTTTTCCACCAAAGTCACGCTGAATACAGTGG...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR GCA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGTGCTGTAGAAAACCTTaGCTTCTTTGTCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLCCRKP*LLCLCW
Trigger: CCAACAAAGACAAAGAAGGCAAGGTTTTCTACAGCA...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTGAGTGTATGTGGCAATaGGTTCTCTATCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSECMWQ*VLYPEA
Trigger: AGCCTCTGGATAGAGAACGCATTGCCACATACACTC...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTCAGCTGTTGCTGTTGTaGTTAACCCCTCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSQLLLL*LTPHLE
Trigger: TTCAAGGTGAGGGGTTAAGCACAACAGCAACAGCTG...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAACGTGTAGAATGTACTaGTGCTTGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTTCRMY*CLASKS
Trigger: GGATTTTGAGGCCAAGCAGCAGTACATTCTACACGT...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTCAGCAACGTGATTTCTaGATTTCCCAGCACATGGGT +
Preference number: 4 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIQQRDF*ISQHMG
Trigger: ACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTG...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAAGAAAATCTGCAAGGTaGTGGGTGAACCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTRKSAR*WVNLLM
Trigger: CATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCT...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSFHKCV*LLGSVG
Trigger: TCCTACACTGCCCAGGAGCCAGACACATTTATGGAA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGATCTAAGGTGGTCACTTaGTCTTTATTCTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERSKVVT*SLFWLS
Trigger: GGATAACCAGAATAAAGACCAAGTGACCACCTTAGA...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CACCTCAATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCAATTTGGGTATCTTTTaGACATCACCACCATGTAAA +
Preference number: 4 (lower is better)
Translates to: HLNHPQHQFAKLPGSMTSNLGIF*TSPPCK
Trigger: TTTACATGGTGGTGATGTCCAAAAGATACCCAAATT...GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATTGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTCTCAGAACAAGTCACTaGATAGCTGCCCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSLRTSH*IAAHCK
Trigger: CTTGCAATGGGCAGCTATCCAGTGACTTGTTCTGAG...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTCCACTGTATTCAGCGTaGCTTTGGTGGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKIPLYSA*LWWKTF
Trigger: GAAAGTTTTCCACCAAAGTCACGCTGAATACAGTGG...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR TCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAAGTTTGAGGTTACAGTaGGCTATGATCACATCACTG +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTSLRLQ*AMITSL
Trigger: CAGTGATGTGATCATAGCTCACTGTAACCTCAAACT...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACATGTAGAATGTACTGCTaGTTGGCCTCAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTCRMYC*LASKSK
Trigger: CTTGGATTTTGAGGCCAAGCAGCAGTACATTCTACA...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTACTTGGTCTTTATTCTaGTTATCCATGAGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: TDLVSETHVETPPFLPEFTWSLF*LSMSLR
Trigger: TCTCAAGCTCATGGATAACCAGAATAAAGACCAAGT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCACTATTCTAAGTCCTaGAGTATATCACTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAHYSKS*SISLLL
Trigger: AAGCAAGAGTGATATACTCCAGGACTTAGAATAGTG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR GCA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTGTAGAATGTACTGCTaGTTGGCCTCAAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSCRMYC*LASKSK
Trigger: CTTGGATTTTGAGGCCAAGCAGCAGTACATTCTACA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAAAATTTGGGTATCTTTTaGACATCACCACCATGTAAA +
Preference number: 4 (lower is better)
Translates to: KICKVLGEPSDAKVVLLENLGIF*TSPPCK
Trigger: TTTACATGGTGGTGATGTCCAAAAGATACCCAAATT...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CCA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCACTTGGTCTTTATTCTaGTTATCCATGAGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HLVFILVIHELEIDFVVTTWSLF*LSMSLR
Trigger: TCTCAAGCTCATGGATAACCAGAATAAAGACCAAGT...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
3UTR CAA 72 bp GTGACATTCTCTACACAGAACTATATTCGATATAGCTaGAACTGCCGAAAAATCAAGACAATTCCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: VTFSTQNYIRYS*NCRKIKTIPKS
Trigger: ACTTTTTGGAATTGTCTTGATTTTTCGGCAGTTCAAGCTATATCGAATATAGTTCTGTGTAGAGAATGTCAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS CCA 90 bp CAGCAGCAGCAGCGCCGAGAGGCTGCGGCTCCAAGGGCCCATGGCTaGCCGGGGACGCCGAGCGAGGGCAGGCGCCGGGTGCGGTCGGGT +
Preference number: 5 (lower is better)
Translates to: QQQQRREAAAPRAHG*PGTPSEGRRRVRSG
Trigger: ACCCGACCGCACCCGGCGCCTGCCCTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGCTGCTGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS GCA 90 bp AGAGCCAAGAGGAGACCTGCAGCAGCAGCAGCAGCGCCGAGAGGCTaGGGCTCCAAGGGCCCATGGCTGGCCGGGGACGCCGAGCGAGGG +
Preference number: 5 (lower is better)
Translates to: RAKRRPAAAAAAPRG*GSKGPWLAGDAERG
Trigger: CCCTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGCTGCTGCTGCTGCAGGTCTCCTCTTGGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS TCA 90 bp CTCTGCCCAGGACGCGGCCTCTCTCCAGGTGGCGCCGGGGCACCGTaGACGTGTAGCTCTCGGCGTCAAAGCCAGGGTGGCAGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LCPGRGLSPGGAGAP*TCSSRRQSQGGRAP
Trigger: CGGAGCCCTGCCACCCTGGCTTTGACGCCGAGAGCTACACGTTCACGGTGCCCCGGCGCCACCTGGAGAGAGGCCGCGTCCTGGGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCCTCACAGCTGTTGCTGTaGTGCTTAACCCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: TWVWGPPLSSPLVVLAASSQLLL*CLTPHL
Trigger: AAGGTGAGGGGTTAAGCACAACAGCAACAGCTGTGA...GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCTCCAGAATGTACTGCTGCTaGGCCTCAAAATCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: TWVWGPPLSSPLVVLAASRMYCC*ASKSKP
Trigger: GGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTCT...GGAGGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCGCCAGTTTCTGCATCTaGCCAGGTACCATACAAACC +
Preference number: 5 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAASFCI*PGTIQT
Trigger: GGTTTGTATGGTACCTGGCAAGATGCAGAAACTGGC...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCACCATCTGTGCCCACTTaGAATCGGGTGTCGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGAPSVPT*NRVSRE
Trigger: TTCCCTCGACACCCGATTCAAAGTGGGCACAGATGG...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCGGGTGTGTCAGCTCCTaGGCCAGTGATGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQAGCVSS*ASDAVE
Trigger: TTCTACAGCATCACTGGCCAAGGAGCTGACACACCC...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACAAGGGAGCTCAGGATCTaGGCTGAGGATGGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTRELRI*AEDGVS
Trigger: GCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCT...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AGCACATGGGTCTGGGGCCCGCCTCTCTCGAGTCCCCTAGTCGTCCTCGCCGCCATGGTGAACATATTTTaGTCAGGGAGCTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: STWVWGPPLSSPLVVLAAMVNIF*SGSSGS
Trigger: AGATCCTGAGCTCCCTGACAAAAATATGTTCACCAT...GGCGGCGAGGACGACTAGGGGACTCGAGAGAGGCGGGCCCCAGACCCATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp TCGGGATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCATCTGGTATGGGGGCGTaGTCATTCACATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: SGLAGRGRYRGTLMRVGASGMGA*SFTSDR
Trigger: CCTGTCTGATGTGAATGACAACGCCCCCATACCAGA...TGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAATCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCAAAAATGGCAGGGAGTaGGGGAGCTGGGCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAKNGRE*GSWAGA
Trigger: TGCACCTGCCCAGCTCCCCAACTCCCTGCCATTTTT...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCATTGAAGGTCAGCAGCTaGAACCACCAGGGTATACGT +
Preference number: 5 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSLKVSS*NHQGIR
Trigger: ACGTATACCCTGGTGGTTCAAGCTGCTGACCTTCAA...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCTCACAGCTGTTGCTGTaGTGCTTAACCCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVSQLLL*CLTPHL
Trigger: AAGGTGAGGGGTTAAGCACAACAGCAACAGCTGTGA...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp CATGAGGGTTGGTGCAACGTCGTTACGAGTCACTTCAGGCCGAGCGTCCAGGCCAGAATGTACTGCTGCTaGGCCTCAAAATCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: HEGWCNVVTSHFRPSVQARMYCC*ASKSKP
Trigger: GGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTCT...GGCCTGGACGCTCGGCCTGAAGTGACTCGTAACGACGTTGCACCAACCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCTCTGGTATGGGGGCGTaGTCATTCACATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: NHQQRDFCISQHMGLGPASGMGA*SFTSDR
Trigger: CCTGTCTGATGTGAATGACAACGCCCCCATACCAGA...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GGGGGCGTTGTCATTCACATCAGACAGGATCAGCAGAAGTGTCCCTGTTCCAGTGGCAGTAAGGGCTCTTaGACCACCGCTCTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: GGVVIHIRQDQQKCPCSSGSKGS*TTALLR
Trigger: TCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGCC...ACTGGAACAGGGACACTTCTGCTGATCCTGTCTGATGTGAATGACAACGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTAAAAATGGCAGGGAGTaGGGGAGCTGGGCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCKNGRE*GSWAGA
Trigger: TGCACCTGCCCAGCTCCCCAACTCCCTGCCATTTTT...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCTGGGGATTCTGGGCTTaGAGTACAAACCACGGATCT +
Preference number: 5 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVWGFWA*STNHGS
Trigger: AGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCA...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSKIGCP*STGAIF
Trigger: GAAGATTGCACCGGTCGACAAAGGACAGCCTATTTT...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp GTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTGTAAGCGATGGCGGCATTGTAGGGTGTGTCAGCTCCTaGGCCAGTGATGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: VRELRILAEDGVSDGGIVGCVSS*ASDAVE
Trigger: TTCTACAGCATCACTGGCCAAGGAGCTGACACACCC...TACAATGCCGCCATCGCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAATCCCACGCTGGGGTATaGGGGGCATCAGCATCAGTC +
Preference number: 5 (lower is better)
Translates to: DHITASQAWAMERNCLLKSHAGV*GASASV
Trigger: GACTGATGCTGATGCCCCCAATACCCCAGCGTGGGA...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCCAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGG +
Preference number: 5 (lower is better)
Translates to: NHQQRDFCISQHMGLGPAQNGRN*QSCFDR
Trigger: CCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTG...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp TTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACACGCTGACCTCTAAGGTGATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: FLQTPAAPSQSHTLTSKVIGGLS*VSVTVI
Trigger: GATCACAGTCACTGACACCAACGATAATCCTCCGAT...CACCTTAGAGGTCAGCGTGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTATGTCAGCCAGCTTCTaGAAGCGATTGCCCCATTCG +
Preference number: 5 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCMSASF*KRLPHS
Trigger: CGAATGGGGCAATCGCTTCAAGAAGCTGGCTGACAT...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCCATCAGTTTGCTAAATaGCCAGGCTCAATGACAAGC +
Preference number: 5 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVHQFAK*PGSMTS
Trigger: GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATG...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp CTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCACAGTCACACATGTCAGAAACACATGTaGAGACTCCTCCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: LRQAVPSYRRQRPLHSHTCQKHM*RLLHSF
Trigger: GAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACA...TGTGTGACTGTGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS GCA 90 bp CACTTAGCCGTGTCCATGGAAGAAATGAGAATCAGCTCTGTCTCCTaGACATCATTTCCAAAAGACGGGAGAGCCTCCTCCACTGGCGGG +
Preference number: 5 (lower is better)
Translates to: HLAVSMEEMRISSVS*TSFPKDGRASSTGG
Trigger: CCCGCCAGTGGAGGAGGCTCTCCCGTCTTTTGGAAATGATGTGCAGGAGACAGAGCTGATTCTCATTTCTTCCATGGACACGGCTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564745.1
CDS-3UTR CAA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAACCATCTGTGCCCACTTaGAATCGGGTGTCGAGGGAA +
Preference number: 5 (lower is better)
Translates to: DHITASQAWAMERNCLLKPSVPT*NRVSRE
Trigger: TTCCCTCGACACCCGATTCAAAGTGGGCACAGATGG...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GCTGAGGATGGTGTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCAGGCCAGGAGAGGAGTaGGGAAATGTGAGCAATTCT +
Preference number: 5 (lower is better)
Translates to: AEDGVSDGGIVGVHIIVRRPGEE*GNVSNS
Trigger: AGAATTGCTCACATTTCCCAACTCCTCTCCTGGCCT...GCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTACACCATCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp GTAAGCGATGGCGGCATTGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTTTGAAGGTCAGCAGCTaGAACCACCAGGGTATACGT +
Preference number: 5 (lower is better)
Translates to: VSDGGIVGVHIIVRVCGCLKVSS*NHQGIR
Trigger: ACGTATACCCTGGTGGTTCAAGCTGCTGACCTTCAA...ACAGCCACAGACGCGGACGATGATGTGAACACCTACAATGCCGCCATCGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp TGCAATCCTGCTTCGACAGGCTGTGCCTTCCTACAGACGCCAGCGGCCCCTTCATTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: CNPASTGCAFLQTPAAPSFKMPS*FTGFVV
Trigger: CACCACAAATCCAGTGAACAACGATGGCATTTTGAA...TGAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp GATAGATTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCTCTGGTATGGGGGCGTaGTCATTCACATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: DRFLGWVVVLNGPVGTRPSGMGA*SFTSDR
Trigger: CCTGTCTGATGTGAATGACAACGCCCCCATACCAGA...GGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAATCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp CCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGCCATCAGGGAGCTCAGGATCTaGGCTGAGGATGGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: PQHQFAKLPGSMTSSPAIRELRI*AEDGVS
Trigger: GCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCT...GATGGCAGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AACCACCAGCAACGTGATTTCTGCATTTCCCAGCACATGGGTCTGGGGCCCGCCTGTGGTGACGACAAATaGTCCACCATCATCATTCAA +
Preference number: 5 (lower is better)
Translates to: NHQQRDFCISQHMGLGPACGDDK*STIIIQ
Trigger: TTGAATGATGATGGTGGACAATTTGTCGTCACCACA...GGCGGGCCCCAGACCCATGTGCTGGGAAATGCAGAAATCACGTTGCTGGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACAGGCAGTAAGGGCTCTTaGACCACCGCTCTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTGSKGS*TTALLR
Trigger: TCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGCC...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp GAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAATGATGTTTATGACCTGAGGGGCAGTAAGGGCTCTTaGACCACCGCTCTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: EGRCIGRKVCINDVYDLRGSKGS*TTALLR
Trigger: TCGGAGGAGAGCGGTGGTCAAAGAGCCCTTACTGCC...CCTCAGGTCATAAACATCATTGATGCAGACCTTCCTCCCAATACATCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AGGGTATACGTAGGGAAACTCTCTCGGTCCAGCCCAGTGGTGACCACACTGATGAACCGTAGAGGCCTTTaGACTGTAATCACACCATCT +
Preference number: 5 (lower is better)
Translates to: RVYVGKLSRSSPVVTTLMNRRGL*TVITPS
Trigger: AGATGGTGTGATTACAGTCAAAAGGCCTCTACGGTT...CATCAGTGTGGTCACCACTGGGCTGGACCGAGAGAGTTTCCCTACGTATACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp TGTGATTTCCTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGTTGTACGTGGTGGGATaGAAGATCGGAGGATTATCG +
Preference number: 5 (lower is better)
Translates to: CDFLAHAKVLGHFHSLFRLYVVG*KIGGLS
Trigger: CGATAATCCTCCGATCTTCAATCCCACCACGTACAA...CCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAGGAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTCCCACGCTGGGGTATaGGGGGCATCAGCATCAGTC +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPSHAGV*GASASV
Trigger: GACTGATGCTGATGCCCCCAATACCCCAGCGTGGGA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGTCCCACGCTGGGGTATaGGGGGCATCAGCATCAGTC +
Preference number: 5 (lower is better)
Translates to: AAESELAKQEFLQESPEWSHAGV*GASASV
Trigger: GACTGATGCTGATGCCCCCAATACCCCAGCGTGGGA...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGCCAATTTCATCGGGATaGGCAGGGCGGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWPISSG*AGRGRY
Trigger: GTATCTTCCCCGCCCTGCCAATCCCGATGAAATTGG...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAATCAAAAGCAGGCACTaGGGGATTCTGGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: DHITASQAWAMERNCLLKIKSRH*GILGFE
Trigger: CTCAAAGCCCAGAATCCCCAAGTGCCTGCTTTTGAT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp ATTGGCAGGGCGGGGAAGATACCGGGGGACACTCATGAGGGTTGGTGCAACGTCGTACCATACAAACCTTaGCTGTTTTCAAAATGCCAT +
Preference number: 5 (lower is better)
Translates to: IGRAGKIPGDTHEGWCNVVPYKP*LFSKCH
Trigger: ATGGCATTTTGAAAACAGCAAAGGTTTGTATGGTAC...GACGTTGCACCAACCCTCATGAGTGTCCCCCGGTATCTTCCCCGCCCTGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS TCA 90 bp TTGGCCTCAAAATCCAAGCCCAGGGGACAAGGGTATGAACAGCTGTaGGGATGCCAGTTTCTGCATCTTGCCAGGTACCATACAAACCTT +
Preference number: 5 (lower is better)
Translates to: LASKSKPRGQGYEQL*GCQFLHLARYHTNL
Trigger: AAGGTTTGTATGGTACCTGGCAAGATGCAGAAACTGGCATCCTCACAGCTGTTCATACCCTTGTCCCCTGGGCTTGGATTTTGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp GGAAATGGCACCAGTGTCCGGATTAATCTCCAGCCAGTTGGCAGTGTCTCTCCAAACCGTAGAGGCCTTTaGACTGTAATCACACCATCT +
Preference number: 5 (lower is better)
Translates to: GNGTSVRINLQPVGSVSPNRRGL*TVITPS
Trigger: AGATGGTGTGATTACAGTCAAAAGGCCTCTACGGTT...TGGAGAGACACTGCCAACTGGCTGGAGATTAATCCGGACACTGGTGCCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp CATATTTTTGTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTGTAAGCGATGGCTCACAGCTGTTGCTGTaGTGCTTAACCCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: HIFVRELRILAEDGVSDGSQLLL*CLTPHL
Trigger: AAGGTGAGGGGTTAAGCACAACAGCAACAGCTGTGA...GCCATCGCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCTGACAAAAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp TTCTTGGGTTGGGTCGTTGTACTGAATGGTCCAGTTGGCACTCGCCCCGTGTGTTTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLGWVVVLNGPVGTRPVCFKMPS*FTGFVV
Trigger: CACCACAAATCCAGTGAACAACGATGGCATTTTGAA...ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAACCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp CTGGCCCACGCCAAAGTCCTCGGACACTTCCACTCTCTTTTCAGGAGGCACAAACAAAATGATAGATTCTaGGGTTGGGTCGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: LAHAKVLGHFHSLFRRHKQNDRF*GWVVVL
Trigger: CAGTACAACGACCCAACCCAAGAATCTATCATTTTG...TTTGTGCCTCCTGAAAAGAGAGTGGAAGTGTCCGAGGACTTTGGCGTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp TCTGACTCTGAGGAGTTCAGGGAGCTCAGACTAGCAGCTTCGGAACCGCTTCCTCAAAATGATAGATTCTaGGGTTGGGTCGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: SDSEEFRELRLAASEPLPQNDRF*GWVVVL
Trigger: CAGTACAACGACCCAACCCAAGAATCTATCATTTTG...AGGAAGCGGTTCCGAAGCTGCTAGTCTGAGCTCCCTGAACTCCTCAGAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGATGTCAGCCAGCTTCTaGAAGCGATTGCCCCATTCG +
Preference number: 5 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWMSASF*KRLPHS
Trigger: CGAATGGGGCAATCGCTTCAAGAAGCTGGCTGACAT...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS CCA 90 bp TTGTCCACCATCATCATTCAATATGGTGTATACAGCCTCCCACGCTaGGGTATTGGGGGCATCAGCATCAGTCACTTTCAGTGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LSTIIIQYGVYSLPR*GIGGISISHFQCGD
Trigger: ATCACCACACTGAAAGTGACTGATGCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTATACACCATATTGAATGATGATGGTGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CCA 90 bp CCAGTAGCAACTGGAGAACGTTATTTTCTGTTCCATAAATGTGTCTaGCTCCTGGGCAGTGTAGGATGTGATTTCCTGGCCCACGCCAAA +
Preference number: 5 (lower is better)
Translates to: PVATGERYFLFHKCV*LLGSVGCDFLAHAK
Trigger: TTTGGCGTGGGCCAGGAAATCACATCCTACACTGCCCAGGAGCCAGACACATTTATGGAACAGAAAATAACGTTCTCCAGTTGCTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAATGTGAGCAATTCTGCTaGGATTCCAGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: RHLGILGFEYKPRILCQKCEQFC*DSRNGG
Trigger: GCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCACA...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTGGGTGTGTCAGCTCCTaGGCCAGTGATGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPGCVSS*ASDAVE
Trigger: TTCTACAGCATCACTGGCCAAGGAGCTGACACACCC...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GTTAATGGTGAACATATTTTTGTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTAGGGAGCTCAGGATCTaGGCTGAGGATGGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: VNGEHIFVRELRILAEDGRELRI*AEDGVS
Trigger: GCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCT...ACCATCCTCAGCCAAGATCCTGAGCTCCCTGACAAAAATATGTTCACCATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTTGAAGGTCAGCAGCTaGAACCACCAGGGTATACGT +
Preference number: 5 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWLKVSS*NHQGIR
Trigger: ACGTATACCCTGGTGGTTCAAGCTGCTGACCTTCAA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASIGGLS*VSVTVI
Trigger: GATCACAGTCACTGACACCAACGATAATCCTCCGAT...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGTTGTACGTGGTGGGATaGAAGATCGGAGGATTATCG +
Preference number: 5 (lower is better)
Translates to: LKGRELKNHQQRDFCISQLYVVG*KIGGLS
Trigger: CGATAATCCTCCGATCTTCAATCCCACCACGTACAA...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAACATCAGTTTGCTAAATaGCCAGGCTCAATGACAAGC +
Preference number: 5 (lower is better)
Translates to: DHITASQAWAMERNCLLKHQFAK*PGSMTS
Trigger: GCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATG...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS TCA 90 bp CGTGATCAAAATCTCCATTGGATCCTCAACTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAGAGTGTATGTGGCAATGCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RDQNLHWILNCIPVG*HSVREESVCGNAFS
Trigger: AGAGAACGCATTGCCACATACACTCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATTTTGATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566612.5
CDS TCA 90 bp GACCCCTTAAAGACCTCCTGGGTGAATTCGGGCTTGTTGTCATTCTaGTCGGTTACCGTGATCAAAATCTCCATTGGATCCTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: DPLKTSWVNSGLLSF*SVTVIKISIGSSTA
Trigger: TGCAGTTGAGGATCCAATGGAGATTTTGATCACGGTAACCGATCAGAATGACAACAAGCCCGAATTCACCCAGGAGGTCTTTAAGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CCA 90 bp TTACCCCGGTGTCAACAAGCTTCTAAGAGATACTTACAGTGTATGTaGCAATGCGTTCTCTATCCAGAGGCTCTGTCACCTTCAGCCATC +
Preference number: 5 (lower is better)
Translates to: LPRCQQASKRYLQCM*QCVLYPEALSPSAI
Trigger: GATGGCTGAAGGTGACAGAGCCTCTGGATAGAGAACGCATTGCCACATACACTGTAAGTATCTCTTAGAAGCTTGTTGACACCGGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567320.1
CDS-3UTR CAA 90 bp CCGTGTGTTAGTTCTGCTGTGAAGGGAGATGTATTGGGAGGAAGGTCTGCATCAAACCGTAGAGGCCTTTaGACTGTAATCACACCATCT +
Preference number: 5 (lower is better)
Translates to: PCVSSAVKGDVLGGRSASNRRGL*TVITPS
Trigger: AGATGGTGTGATTACAGTCAAAAGGCCTCTACGGTT...TGATGCAGACCTTCCTCCCAATACATCTCCCTTCACAGCAGAACTAACACACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp GATCACATCACTGCATCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAATGGTGAACATATTTTaGTCAGGGAGCTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: DHITASQAWAMERNCLLKMVNIF*SGSSGS
Trigger: AGATCCTGAGCTCCCTGACAAAAATATGTTCACCAT...TTTTAAGAGACAGTTTCGCTCCATCGCCCAGGCCTGGGATGCAGTGATGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp TTGTGCTTAACCCCTCACCTTGAAGGTCAGCAGCTTGAACCACCAGGGTATACGATGGTGAACATATTTTaGTCAGGGAGCTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: LCLTPHLEGQQLEPPGYTMVNIF*SGSSGS
Trigger: AGATCCTGAGCTCCCTGACAAAAATATGTTCACCAT...CGTATACCCTGGTGGTTCAAGCTGCTGACCTTCAAGGTGAGGGGTTAAGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAAATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATC +
Preference number: 5 (lower is better)
Translates to: RHLGILGFEYKPRILCQKIGGLS*VSVTVI
Trigger: GATCACAGTCACTGACACCAACGATAATCCTCCGAT...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCCAATTTCATCGGGATaGGCAGGGCGGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAPISSG*AGRGRY
Trigger: GTATCTTCCCCGCCCTGCCAATCCCGATGAAATTGG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AGGCACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACTGGATAGCTGCCCATaGCAAGTTACATACTCAGGA +
Preference number: 5 (lower is better)
Translates to: RHLGILGFEYKPRILCQKLDSCP*QVTYSG
Trigger: TCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAG...TTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp CTCAAGGGAAGGGAGCTGAAAAACCACCAGCAACGTGATTTCTGCATTTCCCAGATCCTCAGCATCAGTTaGCTAAATTGCCAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: LKGRELKNHQQRDFCISQILSIS*LNCQAQ
Trigger: TTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGAT...CTGGGAAATGCAGAAATCACGTTGCTGGTGGTTTTTCAGCTCCCTTCCCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACATGGGGATTCTGGGCTTaGAGTACAAACCACGGATCT +
Preference number: 5 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTWGFWA*STNHGS
Trigger: AGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCA...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS TCA 90 bp CGTGATCAAAATCTCCATTGGATCCTCAACTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAGCTGAACCAGGTTTTTAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: RDQNLHWILNCIPVG*HSVREELNQVFRKW
Trigger: CCATTTCCTAAAAACCTGGTTCAGCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATTTTGATCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS GCA 90 bp CGGTGTCAACAAGCTTCTAAGAGATACTTACAGTGTATGTGGCAATaGGTTCTCTATCCAGAGGCTCTGTCACCTTCAGCCATCCTGTTT +
Preference number: 5 (lower is better)
Translates to: RCQQASKRYLQCMWQ*VLYPEALSPSAILF
Trigger: AAACAGGATGGCTGAAGGTGACAGAGCCTCTGGATAGAGAACGCATTGCCACATACACTGTAAGTATCTCTTAGAAGCTTGTTGACACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567320.1
CDS-3UTR CAA 90 bp TTAATGGTGAACATATTTTTGTCAGGGAGCTCAGGATCTTGGCTGAGGATGGTGTGTGAGCAATTCTGCTaGGATTCCAGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: LMVNIFLSGSSGSWLRMVCEQFC*DSRNGG
Trigger: GCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCACA...CACCATCCTCAGCCAAGATCCTGAGCTCCCTGACAAAAATATGTTCACCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS-3UTR CAA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGTGTGAGCAATTCTGCTaGGATTCCAGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: AAESELAKQEFLQESPEWCEQFC*DSRNGG
Trigger: GCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCACA...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTAGGCCAGGAGAGGAGTaGGGAAATGTGAGCAATTCT +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPRPGEE*GNVSNS
Trigger: AGAATTGCTCACATTTCCCAACTCCTCTCCTGGCCT...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GCAGCAGAATCAGAATTAGCAAAGCAAGAATTCCTCCAAGAATCCCCAGAATGGAGGCCAGGAGAGGAGTaGGGAAATGTGAGCAATTCT +
Preference number: 5 (lower is better)
Translates to: AAESELAKQEFLQESPEWRPGEE*GNVSNS
Trigger: AGAATTGCTCACATTTCCCAACTCCTCTCCTGGCCT...CCATTCTGGGGATTCTTGGAGGAATTCTTGCTTTGCTAATTCTGATTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTAGAATGTACTGCTGCTaGGCCTCAAAATCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPRMYCC*ASKSKP
Trigger: GGGCTTGGATTTTGAGGCCAAGCAGCAGTACATTCT...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ATCTCCAGCCAGTTGGCAGTGTCTCTCCAAATCCGATATGTTATTTTCTGTTCCCAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGG +
Preference number: 5 (lower is better)
Translates to: ISSQLAVSLQIRYVIFCSQNGRN*QSCFDR
Trigger: CCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTG...GGAACAGAAAATAACATATCGGATTTGGAGAGACACTGCCAACTGGCTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPKIGCP*STGAIF
Trigger: GAAGATTGCACCGGTCGACAAAGGACAGCCTATTTT...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAGGCCAGGAGAGGAGTaGGGAAATGTGAGCAATTCT +
Preference number: 5 (lower is better)
Translates to: TDLVSETHVETPPFLPEFRPGEE*GNVSNS
Trigger: AGAATTGCTCACATTTCCCAACTCCTCTCCTGGCCT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGTTGAAGGTCAGCAGCTaGAACCACCAGGGTATACGT +
Preference number: 5 (lower is better)
Translates to: KKICKVLGEPSDAKVVLLLKVSS*NHQGIR
Trigger: ACGTATACCCTGGTGGTTCAAGCTGCTGACCTTCAA...CAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ATAGTTCCGCTCTGTCTTTGGCTGCAGCACTTTAGGCACTATTCTAAGTCCTGGTTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: IVPLCLWLQHFRHYSKSWFKMPS*FTGFVV
Trigger: CACCACAAATCCAGTGAACAACGATGGCATTTTGAA...CCAGGACTTAGAATAGTGCCTAAAGTGCTGCAGCCAAAGACAGAGCGGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp GAGACAAAATTCCTTAAGAAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTCAGAATGGCAGGAATTaGCAATCCTGCTTCGACAGG +
Preference number: 5 (lower is better)
Translates to: ETKFLKKICKVLGEPSDAQNGRN*QSCFDR
Trigger: CCTGTCGAAGCAGGATTGCAAATTCCTGCCATTCTG...AGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTTCTTAAGGAATTTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCCCAATTTCATCGGGATaGGCAGGGCGGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: HLVFILVIHELEIDFVVTPISSG*AGRGRY
Trigger: GTATCTTCCCCGCCCTGCCAATCCCGATGAAATTGG...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACACAGAGAACTCCTATCTaGGGCAAAGCAACTGAATTC +
Preference number: 5 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTQRTPI*GKATEF
Trigger: GAATTCAGTTGCTTTGCCCAAGATAGGAGTTCTCTG...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGATGTGCACACCTGGAATaGGGCAAATGTGTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERCAHLE*GKCVQL
Trigger: GAGCTGAACACATTTGCCCAATTCCAGGTGTGCACA...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: TDLVSETHVETPPFLPEFKIGCP*STGAIF
Trigger: GAAGATTGCACCGGTCGACAAAGGACAGCCTATTTT...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTAGGGAGCTCAGGATCTaGGCTGAGGATGGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSRELRI*AEDGVS
Trigger: GCTTACACCATCCTCAGCCAAGATCCTGAGCTCCCT...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ATCTCCAGCCAGTTGGCAGTGTCTCTCCAAATCCGATATGTTATTTTCTGTTCCGCAACTGGAGAACCATaGTCTGTAGCTATGATTAGG +
Preference number: 5 (lower is better)
Translates to: ISSQLAVSLQIRYVIFCSATGEP*SVAMIR
Trigger: CCTAATCATAGCTACAGACAATGGTTCTCCAGTTGC...GGAACAGAAAATAACATATCGGATTTGGAGAGACACTGCCAACTGGCTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp ACTTGGGGATTCTGGGCTTTGAGTACAAACCACGGATCTTGTGTCAGAAACACACAAAATGATAGATTCTaGGGTTGGGTCGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: TWGFWALSTNHGSCVRNTQNDRF*GWVVVL
Trigger: CAGTACAACGACCCAACCCAAGAATCTATCATTTTG...TGTGTTTCTGACACAAGATCCGTGGTTTGTACTCAAAGCCCAGAATCCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCTGTGAGCAATTCTGCTaGGATTCCAGAAACGGAGGC +
Preference number: 5 (lower is better)
Translates to: HLVFILVIHELEIDFVVTCEQFC*DSRNGG
Trigger: GCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCACA...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp ATCTCCAGCCAGTTGGCAGTGTCTCTCCAAATCCGATATGTTATTTTCTGTTCCTGTGGTGACGACAAATaGTCCACCATCATCATTCAA +
Preference number: 5 (lower is better)
Translates to: ISSQLAVSLQIRYVIFCSCGDDK*STIIIQ
Trigger: TTGAATGATGATGGTGGACAATTTGTCGTCACCACA...GGAACAGAAAATAACATATCGGATTTGGAGAGACACTGCCAACTGGCTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS-3UTR CAA 90 bp AACAAGTCACTGGATAGCTGCCCATTGCAAGTTACATACTCAGGAGATGAAAGAGCAACTGGAGAACCATaGTCTGTAGCTATGATTAGG +
Preference number: 5 (lower is better)
Translates to: NKSLDSCPLQVTYSGDERATGEP*SVAMIR
Trigger: CCTAATCATAGCTACAGACAATGGTTCTCCAGTTGC...TCTTTCATCTCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAGTGACTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTATGTCAGCCAGCTTCTaGAAGCGATTGCCCCATTCG +
Preference number: 5 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSMSASF*KRLPHS
Trigger: CGAATGGGGCAATCGCTTCAAGAAGCTGGCTGACAT...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AATGTGTTCAGCTCAGCCAGCATTTTCTGTAGACATCATCAAAAGCAGGCACTTATCCTCAGCATCAGTTaGCTAAATTGCCAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: NVFSSASIFCRHHQKQALILSIS*LNCQAQ
Trigger: TTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGAT...AAGTGCCTGCTTTTGATGATGTCTACAGAAAATGCTGGCTGAGCTGAACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261769.10
CDS-3UTR CAA 90 bp AAAATCTGCAAGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATGTCAGAAACACATGTaGAGACTCCTCCATTCCTTC +
Preference number: 5 (lower is better)
Translates to: KICKVLGEPSDAKVVLLECQKHM*RLLHSF
Trigger: GAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACA...TTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AATCATCCTCAGCATCAGTTTGCTAAATTGCCAGGCTCAATGACAAGCTCTCCTTACAAACCACGGATCTaGTGTCAGAAACACATGTTG +
Preference number: 5 (lower is better)
Translates to: NHPQHQFAKLPGSMTSSPYKPRI*CQKHML
Trigger: CAACATGTGTTTCTGACACAAGATCCGTGGTTTGTA...AGGAGAGCTTGTCATTGAGCCTGGCAATTTAGCAAACTGATGCTGAGGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTCACAGCTGTTGCTGTaGTGCTTAACCCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSSQLLL*CLTPHL
Trigger: AAGGTGAGGGGTTAAGCACAACAGCAACAGCTGTGA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp ACGGATCTTGTGTCAGAAACACATGTTGAGACTCCTCCATTCCTTCCAGAATTTTGTGGTGACGACAAATaGTCCACCATCATCATTCAA +
Preference number: 5 (lower is better)
Translates to: TDLVSETHVETPPFLPEFCGDDK*STIIIQ
Trigger: TTGAATGATGATGGTGGACAATTTGTCGTCACCACA...AAATTCTGGAAGGAATGGAGGAGTCTCAACATGTGTTTCTGACACAAGATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp CACTTGGTCTTTATTCTGGTTATCCATGAGCTTGAGATTGATTTTGTAGTCACCCTGGATAGCTGCCCATaGCAAGTTACATACTCAGGA +
Preference number: 5 (lower is better)
Translates to: HLVFILVIHELEIDFVVTLDSCP*QVTYSG
Trigger: TCCTGAGTATGTAACTTGCAATGGGCAGCTATCCAG...GGTGACTACAAAATCAATCTCAAGCTCATGGATAACCAGAATAAAGACCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566612.5
CDS-3UTR CAA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTTGTACGTGGTGGGATaGAAGATCGGAGGATTATCG +
Preference number: 5 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSLYVVG*KIGGLS
Trigger: CGATAATCCTCCGATCTTCAATCCCACCACGTACAA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACACAGAGAACTCCTATCTaGGGCAAAGCAACTGAATTC +
Preference number: 5 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTQRTPI*GKATEF
Trigger: GAATTCAGTTGCTTTGCCCAAGATAGGAGTTCTCTG...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS TCA 90 bp CCTTTGCTGTTTTCAAAATGCCATCGTTGTTCACTGGATTTGTGGTaGCGACAAATTGTCCACCATCATCATTCAATATGGTGTATACAG +
Preference number: 5 (lower is better)
Translates to: PLLFSKCHRCSLDLW*RQIVHHHHSIWCIQ
Trigger: CTGTATACACCATATTGAATGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS-3UTR CAA 90 bp AGGTGCTGGGTGAACCTTCTGATGCTAAAGTTGTTCTTCTGGAATATTAAAATTAACCGTAGAGGCCTTTaGACTGTAATCACACCATCT +
Preference number: 5 (lower is better)
Translates to: RCWVNLLMLKLFFWNIKINRRGL*TVITPS
Trigger: AGATGGTGTGATTACAGTCAAAAGGCCTCTACGGTT...AATTTTAATATTCCAGAAGAACAACTTTAGCATCAGAAGGTTCACCCAGCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp CTCCTATCTTGGGCAAAGCAACTGAATTCAGGAGTGAGAGTTGATATTAAAACAATGGTGAACATATTTTaGTCAGGGAGCTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: LLSWAKQLNSGVRVDIKTMVNIF*SGSSGS
Trigger: AGATCCTGAGCTCCCTGACAAAAATATGTTCACCAT...TGTTTTAATATCAACTCTCACTCCTGAATTCAGTTGCTTTGCCCAAGATAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS-3UTR CAA 90 bp AAACTTCTTACCCTAAAAGAGCCCAATAATTTCTGCATCAGAGAACTCCTATCTTACAAACCACGGATCTaGTGTCAGAAACACATGTTG +
Preference number: 5 (lower is better)
Translates to: KLLTLKEPNNFCIRELLSYKPRI*CQKHML
Trigger: CAACATGTGTTTCTGACACAAGATCCGTGGTTTGTA...AGATAGGAGTTCTCTGATGCAGAAATTATTGGGCTCTTTTAGGGTAAGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS CCA 90 bp TACCATACAAACCTTTGCTGTTTTCAAAATGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAATTGTCCACCATCATCATTCAATAT +
Preference number: 5 (lower is better)
Translates to: YHTNLCCFQNAIVVH*ICGDDKLSTIIIQY
Trigger: ATATTGAATGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGTTTGTATGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CCA 72 bp CAGCGCCGAGAGGCTGCGGCTCCAAGGGCCCATGGCTaGCCGGGGACGCCGAGCGAGGGCAGGCGCCGGGTG +
Preference number: 6 (lower is better)
Translates to: QRREAAAPRAHG*PGTPSEGRRRV
Trigger: CACCCGGCGCCTGCCCTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CCA 72 bp GCAGCAGCGCCGAGAGGCTGCGGCTCCAAGGGCCCATaGCTGGCCGGGGACGCCGAGCGAGGGCAGGCGCCG +
Preference number: 6 (lower is better)
Translates to: AAAPRGCGSKGP*LAGDAERGQAP
Trigger: CGGCGCCTGCCCTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTGCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CCA 72 bp AGGGCAGGCGCCGGGTGCGGTCGGGTCGGGCCGGGCTaGAGCGGGCTGGAGTCTGAACTGACTTCCGCAAGC +
Preference number: 6 (lower is better)
Translates to: RAGAGCGRVGPG*SGLESELTSAS
Trigger: GCTTGCGGAAGTCAGTTCAGACTCCAGCCCGCTCCAGCCCGGCCCGACCCGACCGCACCCGGCGCCTGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261769.10
ENST00000566612.5
CDS TCA 72 bp GGACGCGGCCTCTCTCCAGGTGGCGCCGGGGCACCGTaGACGTGTAGCTCTCGGCGTCAAAGCCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: GRGLSPGGAGAP*TCSSRRQSQGG
Trigger: GCCACCCTGGCTTTGACGCCGAGAGCTACACGTTCACGGTGCCCCGGCGCCACCTGGAGAGAGGCCGCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CCA 72 bp TCGGCGTCAAAGCCAGGGTGGCAGGGCTCCGGCTCCTaGCAGAGCCAAGAGGAGACCTGCAGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SASKPGWQGSGS*QSQEETCSSSS
Trigger: GCTGCTGCTGCTGCAGGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTGCCACCCTGGCTTTGACGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS TCA 72 bp CTCCTCCACTGGCGGGGAAAGGATTCCTATGGAACCTaGCGCAGGAGTTGGCTGCACGGTCTGGTTTGCATC +
Preference number: 6 (lower is better)
Translates to: LLHWRGKDSYGT*RRSWLHGLVCI
Trigger: GATGCAAACCAGACCGTGCAGCCAACTCCTGCGTCAGGTTCCATAGGAATCCTTTCCCCGCCAGTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564745.1
CDS CAA 72 bp GCCAGGAGAGGAGTTGGGAAATGTGAGCAATTCTGCTaGGATTCCAGAAACGGAGGCCTGATGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: ARRGVGKCEQFC*DSRNGGLMGRG
Trigger: CCCCCGCCCCATCAGGCCTCCGTTTCTGGAATCCAAGCAGAATTGCTCACATTTCCCAACTCCTCTCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000561751.1
ENST00000562836.5
ENST00000564676.5
ENST00000564745.1
ENST00000566510.5
ENST00000566612.5
CDS TCA 72 bp TGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTCCTGGAAGAGCACCTT +
Preference number: 6 (lower is better)
Translates to: CRCSHHRPRLWL*PPSQRFLEEHL
Trigger: AAGGTGCTCTTCCAGGAACCTCTGTGATGGAGGTCACAGCCACAGACGCGGACGATGATGTGAACACCTACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS GCA 72 bp TGTCGAGGGAAAAATAGGCTGTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACTCTGCCCAGGACGCGGC +
Preference number: 6 (lower is better)
Translates to: CRGKNRLSFVDR*NLQNSLCPGRG
Trigger: GCCGCGTCCTGGGCAGAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CAA 90 bp TGTGCCCACTTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTCTGCCCAGGACGCG +
Preference number: 6 (lower is better)
Translates to: CAHFESGVEGKIGCP*STGAIFKIHSAQDA
Trigger: CGCGTCCTGGGCAGAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAAGTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CAA 90 bp TGTGCCCACTTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACAGCCCGCACTTAGCC +
Preference number: 6 (lower is better)
Translates to: CAHFESGVEGKIGCP*STGAIFKIHSPHLA
Trigger: GGCTAAGTGCGGGCTGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAAGTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564745.1
CDS TCA 72 bp TGTAGGTGTTCACATCATCGTCCGCGTCTGTGGCTGTaGCCTCCATCACAGAGGTTCAGTGTATGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: CRCSHHRPRLWL*PPSQRFSVCGN
Trigger: ATTGCCACATACACTGAACCTCTGTGATGGAGGTCACAGCCACAGACGCGGACGATGATGTGAACACCTACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561751.1
CDS TCA 72 bp AAATCCAAGCCCAGGGGACAAGGGTATGAACAGCTGTaGGGATGCCAGTTTCTGCATCTTGCCAGGTACCAT +
Preference number: 6 (lower is better)
Translates to: KSKPRGQGYEQL*GCQFLHLARYH
Trigger: ATGGTACCTGGCAAGATGCAGAAACTGGCATCCTCACAGCTGTTCATACCCTTGTCCCCTGGGCTTGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CAA 72 bp TTCAATATGGTGTATACAGCCTCCCACGCTGGGGTATaGGGGGCATCAGCATCAGTCACTTTCAGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: FNMVYTASHAGV*GASASVTFSVV
Trigger: CACCACACTGAAAGTGACTGATGCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTATACACCATATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CAA 90 bp CCATCATCATTCAATATGGTGTATACAGCCTCCCACGCTGGGGTATaGGGGGCATCAGCATCAGTCACTTTCAGTGTGGTGATTACGACG +
Preference number: 6 (lower is better)
Translates to: PSSFNMVYTASHAGV*GASASVTFSVVITT
Trigger: CGTCGTAATCACCACACTGAAAGTGACTGATGCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTATACACCATATTGAATGATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS GCA 72 bp TGTCGAGGGAAAAATAGGCTGTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACAGCCCGCACTTAGCCGT +
Preference number: 6 (lower is better)
Translates to: CRGKNRLSFVDR*NLQNSQPALSR
Trigger: ACGGCTAAGTGCGGGCTGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564745.1
CDS CAA 72 bp AAGCCCGTGGTGGGATTGAAGATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATCACAGCTGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: KPVVGLKIGGLS*VSVTVITAVAV
Trigger: AACAGCAACAGCTGTGATCACAGTCACTGACACCAACGATAATCCTCCGATCTTCAATCCCACCACGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422392.6
CDS CAA 90 bp TGTGCCCACTTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTGCTGGATCCGTTAC +
Preference number: 6 (lower is better)
Translates to: CAHFESGVEGKIGCP*STGAIFKIHCWIRY
Trigger: GTAACGGATCCAGCAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAAGTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564676.5
CDS CCA 72 bp ATCATCATTCAATATGGTGTATACAGCCTCCCACGCTaGGGTATTGGGGGCATCAGCATCAGTCACTTTCAG +
Preference number: 6 (lower is better)
Translates to: IIIQYGVYSLPR*GIGGISISHFQ
Trigger: CTGAAAGTGACTGATGCTGATGCCCCCAATACCCCAGCGTGGGAGGCTGTATACACCATATTGAATGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CCA 72 bp TCAAAATCTCCATTGGATCCTCAACTGCATTCCCGTTaGATGACACAGCGTGAGAGAAGAGCTGAACCAGGT +
Preference number: 6 (lower is better)
Translates to: SKSPLDPQLHSR*MTQRERRAEPG
Trigger: ACCTGGTTCAGCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CAA 72 bp ATCTTCAAAATTCACTTTCCTCAACTGCCTCAGCAGTaGCCTCTGCCAAGCCGGCTGTTCCTCTCTCTAAAC +
Preference number: 6 (lower is better)
Translates to: IFKIHFPQLPQQ*PLPSRLFLSLN
Trigger: GTTTAGAGAGAGGAACAGCCGGCTTGGCAGAGGCAACTGCTGAGGCAGTTGAGGAAAGTGAATTTTGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562836.5
CDS CAA 72 bp TTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACAGCCCG +
Preference number: 6 (lower is better)
Translates to: FESGVEGKIGCP*STGAIFKIHSP
Trigger: CGGGCTGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564745.1
CDS CAA 90 bp TCAAAATCCAAGCCCGTGGTGGGATTGAAGATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATCACAGCTGTTGCTGTTGTGCTTAAC +
Preference number: 6 (lower is better)
Translates to: SKSKPVVGLKIGGLS*VSVTVITAVAVVLN
Trigger: GTTAAGCACAACAGCAACAGCTGTGATCACAGTCACTGACACCAACGATAATCCTCCGATCTTCAATCCCACCACGGGCTTGGATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422392.6
CDS CAA 90 bp TGTGCCCACTTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTTTCCTCAACTGCCT +
Preference number: 6 (lower is better)
Translates to: CAHFESGVEGKIGCP*STGAIFKIHFPQLP
Trigger: AGGCAGTTGAGGAAAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAAGTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562836.5
CDS TCA 72 bp AATCTCCATTGGATCCTCAACTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAGAGTGTATGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: NLHWILNCIPVG*HSVREESVCGN
Trigger: ATTGCCACATACACTCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566612.5
CDS TCA 72 bp AAGACCTCCTGGGTGAATTCGGGCTTGTTGTCATTCTaGTCGGTTACCGTGATCAAAATCTCCATTGGATCC +
Preference number: 6 (lower is better)
Translates to: KTSWVNSGLLSF*SVTVIKISIGS
Trigger: GGATCCAATGGAGATTTTGATCACGGTAACCGATCAGAATGACAACAAGCCCGAATTCACCCAGGAGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS TCA 72 bp AATCTCCATTGGATCCTCAACTGCATTCCCGTTGGATaGCACAGCGTGAGAGAAGAGCTGAACCAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: NLHWILNCIPVG*HSVREELNQVF
Trigger: AAAAACCTGGTTCAGCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS GCA 72 bp TGTCGAGGGAAAAATAGGCTGTCCTTTGTCGACCGGTaGAATCTTCAAAATTCACTGCTGGATCCGTTACCA +
Preference number: 6 (lower is better)
Translates to: CRGKNRLSFVDR*NLQNSLLDPLP
Trigger: TGGTAACGGATCCAGCAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564676.5
CDS GCA 72 bp CAAGCTTCTAAGAGATACTTACAGTGTATGTGGCAATaGGTTCTCTATCCAGAGGCTCTGTCACCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: QASKRYLQCMWQ*VLYPEALSPSA
Trigger: GGCTGAAGGTGACAGAGCCTCTGGATAGAGAACGCATTGCCACATACACTGTAAGTATCTCTTAGAAGCTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567320.1
CDS GCA 72 bp GACAAGGGTATGAACAGCTGTGAGGATGCCAGTTTCTaGATCTTGCCAGGTACCATACAAACCTTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: DKGMNSCEDASF*ILPGTIQTFAV
Trigger: AACAGCAAAGGTTTGTATGGTACCTGGCAAGATGCAGAAACTGGCATCCTCACAGCTGTTCATACCCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CCA 72 bp TCAAAATCTCCATTGGATCCTCAACTGCATTCCCGTTaGATGACACAGCGTGAGAGAAGAGAGTGTATGTGG +
Preference number: 6 (lower is better)
Translates to: SKSPLDPQLHSR*MTQRERRECMW
Trigger: CCACATACACTCTCTTCTCTCACGCTGTGTCATCCAACGGGAATGCAGTTGAGGATCCAATGGAGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000562836.5
ENST00000566612.5
CDS CAA 72 bp TTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTCTGCC +
Preference number: 6 (lower is better)
Translates to: FESGVEGKIGCP*STGAIFKIHSA
Trigger: GGCAGAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000422392.6
ENST00000566510.5
ENST00000566612.5
CDS CAA 72 bp TTGTACGTGGTGGGATTGAAGATCGGAGGATTATCGTaGGTGTCAGTGACTGTGATCACAGCTGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LYVVGLKIGGLS*VSVTVITAVAV
Trigger: AACAGCAACAGCTGTGATCACAGTCACTGACACCAACGATAATCCTCCGATCTTCAATCCCACCACGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000565810.1
ENST00000566510.5
ENST00000566612.5
CDS CAA 72 bp TTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: FESGVEGKIGCP*STGAIFKIHCW
Trigger: CCAGCAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564676.5
CDS CCA 72 bp GCCCTTTGCTGTTTTCAAAATGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAATTGTCCACCATCATC +
Preference number: 6 (lower is better)
Translates to: ALCCFQNAIVVH*ICGDDKLSTII
Trigger: GATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566612.5
CDS CCA 72 bp TGTCAACAAGCTTCTAAGAGATACTTACAGTGTATGTaGCAATGCGTTCTCTATCCAGAGGCTCTGTCACCT +
Preference number: 6 (lower is better)
Translates to: CQQASKRYLQCM*QCVLYPEALSP
Trigger: AGGTGACAGAGCCTCTGGATAGAGAACGCATTGCCACATACACTGTAAGTATCTCTTAGAAGCTTGTTGACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567320.1
CDS CAA 72 bp TTTGAATCGGGTGTCGAGGGAAAAATAGGCTGTCCTTaGTCGACCGGTGCAATCTTCAAAATTCACTTTCCT +
Preference number: 6 (lower is better)
Translates to: FESGVEGKIGCP*STGAIFKIHFP
Trigger: AGGAAAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562836.5
CDS CAA 72 bp GGTATGAACAGCTGTGAGGATGCCAGTTTCTGCATCTaGCCAGGTACCATACAAACCTTTGCTGTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: GMNSCEDASFCI*PGTIQTFAVFK
Trigger: TTTGAAAACAGCAAAGGTTTGTATGGTACCTGGCAAGATGCAGAAACTGGCATCCTCACAGCTGTTCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CAA 90 bp TTTCAAAATGCCATCGTTGTTCACTGGATTTGTGGTGACGACAAATaGTCCACCATCATCATTCAATATGGTGTATACAGCCTCCCACGC +
Preference number: 6 (lower is better)
Translates to: FQNAIVVHWICGDDK*STIIIQYGVYSLPR
Trigger: GCGTGGGAGGCTGTATACACCATATTGAATGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CAA 72 bp GCCATCGTTGTTCACTGGATTTGTGGTGACGACAAATaGTCCACCATCATCATTCAATATGGTGTATACAGC +
Preference number: 6 (lower is better)
Translates to: AIVVHWICGDDK*STIIIQYGVYS
Trigger: GCTGTATACACCATATTGAATGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5
CDS CAA 72 bp CCAGTTTCTGCATCTTGCCAGGTACCATACAAACCTTaGCTGTTTTCAAAATGCCATCGTTGTTCACTGGAT +
Preference number: 6 (lower is better)
Translates to: PVSASCQVPYKP*LFSKCHRCSLD
Trigger: ATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGTTTGTATGGTACCTGGCAAGATGCAGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CAA 90 bp TTGCCAGGTACCATACAAACCTTTGCTGTTTTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTGACGACAAATTGTCCACCATCATCA +
Preference number: 6 (lower is better)
Translates to: LPGTIQTFAVFKMPS*FTGFVVTTNCPPSS
Trigger: TGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGTTTGTATGGTACCTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CCA 72 bp AACCTTTGCTGTTTTCAAAATGCCATCGTTGTTCACTaGATTTGTGGTGACGACAAATTGTCCACCATCATC +
Preference number: 6 (lower is better)
Translates to: NLCCFQNAIVVH*ICGDDKLSTII
Trigger: GATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS CAA 72 bp AAATCCAAGCCCTTTGCTGTTTTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTGACGACAAATTGTCCA +
Preference number: 6 (lower is better)
Translates to: KSKPFAVFKMPS*FTGFVVTTNCP
Trigger: TGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGGCTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566612.5
CDS CAA 72 bp ACCATACAAACCTTTGCTGTTTTCAAAATGCCATCGTaGTTCACTGGATTTGTGGTGACGACAAATTGTCCA +
Preference number: 6 (lower is better)
Translates to: TIQTFAVFKMPS*FTGFVVTTNCP
Trigger: TGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAACAGCAAAGGTTTGTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566510.5
CDS TCA 72 bp TTTTCAAAATGCCATCGTTGTTCACTGGATTTGTGGTaGCGACAAATTGTCCACCATCATCATTCAATATGG +
Preference number: 6 (lower is better)
Translates to: FSKCHRCSLDLW*RQIVHHHHSIW
Trigger: CCATATTGAATGATGATGGTGGACAATTTGTCGTCACCACAAATCCAGTGAACAACGATGGCATTTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261769.10
ENST00000562836.5
ENST00000566510.5
ENST00000566612.5