Pregenerated sensors for CDCA7 (Homo sapiens)
Ensembl gene IDs: ENSG00000144354Ensembl transcript IDs: ENST00000306721.8, ENST00000347703.7, ENST00000410019.3, ENST00000410101.7, ENST00000435616.5, ENST00000467411.5, ENST00000496441.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAGGAGTTTAGTGCCACAGGAGCACAGCAAGGAGAGACCAAACTaGCCAGGATTCAAGGAGGATCATCCAGAGATCTGTCAGGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: KRSLVPQEHSKERPN*PGFKEDHPEICQGV Trigger: AACCCCCTGACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGCTCCTGTGGCACTAAACTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR TCA 90 bp | GCGGTCTCCTTGATTGCTGCCCATGAGGGGCTTAGTCTAGCTGGGAAGGAAAGAAGTCACAGAATTCTCTaGGGGCTGGCGGGACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AVSLIAAHEGLSLAGKERSHRIL*GLAGLC Trigger: GCAGAGTCCCGCCAGCCCTCAGAGAATTCTGTGACT...TCTTTCCTTCCCAGCTAGACTAAGCCCCTCATGGGCAGCAATCAAGGAGACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTGCCACAGGAGCACAGCAAGGAGAGACCAAACTGCCCAGGATTCAAGGAGAGGTCCAGAGTGCCTaGACTGGCTGCGGGTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: FSATGAQQGETKLPRIQGEVQSA*TGCGSY Trigger: GTAGGACCCGCAGCCAGTGCAGGCACTCTGGACCTC...TCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGCTCCTGTGGCACTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCTACAGCCTTCCCGAACTGACTGCAGCCTCATTCCATCTTGTATCTCACTCGTCAGAGTCGGCATaGAAAATACCGGCCAGTTCG | + |
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Preference number: 2 (lower is better) Translates to: GSYSLPELTAASFHLVSHSSESA*KIPASS Trigger: CGAACTGGCCGGTATTTTTCATGCCGACTCTGACGA...GTGAGATACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGTAGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTCGGAGCCTCCTTCCCGAACTGACTaGAGCCTCATTCCATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: EICQGVSSRSPSFVESEPPSRTD*SLIPSC Trigger: ACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGG...AGGCTCCGACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCAGAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTCCTGGTACTCCGCGCTaGAAACTTCATCGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: IIQRSVRGFPLGPLRLLSPGTPR*KLHRHP Trigger: AGGGTGGCGATGAAGTTTCCAGCGCGGAGTACCAGG...ACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTCTGGATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGCCACAGGAGCACAGCAAGGAGAGACCAAACTGCCCAGGATTCAAGGATGTTGGTTGCTCCCCTaGTACTCCGCGCTGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: FSATGAQQGETKLPRIQGCWLLP*YSALET Trigger: AGTTTCCAGCGCGGAGTACCAGGGGAGCAACCAACA...TCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGCTCCTGTGGCACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTTTACAAGAAAGATTTaGGAAGTAGAAGGCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRLERSIGNRGGCCEMGVFTRKI*EVEGRQ Trigger: CTGCCTGCCTTCTACTTCTCAAATCTTTCTTGTAAA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| 3UTR GCA 72 bp | TTAGTGCCACAGGAGCACAGCAAGGAGAGACCAAACTaGCCAGGATTCAAGGAGGATCATCCAGAGATCTGT | + |
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Preference number: 3 (lower is better) Translates to: LVPQEHSKERPN*PGFKEDHPEIC Trigger: ACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGCTCCTGTGGCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| 3UTR-3UTR CAA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTTTTACAAGAAAGATTaGAGAAGTAGAAGGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KRLERSIGNRGGCCEMGVFYKKD*RSRRQA Trigger: TGCCTGCCTTCTACTTCTCAAATCTTTCTTGTAAAA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | GAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTCGGAGCCTCGCGGCGAGCGTCCATaGTGGTGGCGGGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EICQGVSSRSPSFVESEPRGERP*WWRVPR Trigger: TCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCG...AGGCTCCGACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCGCGGCGAGCGTCCATaGTGGTGGCGGGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVRGERP*WWRVPR Trigger: TCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | GAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTCGGAGCCTCATGCTGGTGGCGGGTaGCCAGATCGGCGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EICQGVSSRSPSFVESEPHAGGG*PDRRLE Trigger: CTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATG...AGGCTCCGACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGCCCAGATCGGCGCTTaGAGCGGGGAGAGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVAQIGA*SGESGA Trigger: TGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGAGCGTCCATGCTGGTaGCGGGTGCCCAGATCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVERPCW*RVPRSA Trigger: CGCCGATCTGGGCACCCGCCACCAGCATGGACGCTC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGGCGAGCGTCCATGCTaGTGGCGGGTGCCCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVGERPC*WRVPRS Trigger: CGATCTGGGCACCCGCCACCAGCATGGACGCTCGCC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTACAGCCTTCCCGAACTaGCTGCAGCCTCGGCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVTAFPN*LQPRHA Trigger: CGCGTGCCGAGGCTGCAGTCAGTTCGGGAAGGCTGT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCATGCTGGTGGCGGGTaGCCAGATCGGCGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVHAGGG*PDRRLE Trigger: CTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCCTTCCCGAACTGACTaGAGCCTCGGCACGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVPSRTD*SLGTRR Trigger: TCGCCGCGTGCCGAGGCTGCAGTCAGTTCGGGAAGG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | AAACTGCCCAGGATTCAAGGAGGATCATCCAGAGATCTGTCAGGGGGTTTCCTCGCCCAGATCGGCGCTTaGAGCGGGGAGAGCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPRIQGGSSRDLSGGFLAQIGA*SGESGA Trigger: TGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGC...GAGGAAACCCCCTGACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCAGGGGCCACAGAACTaGCCTCGAACGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVQGPQN*PRTPQQ Trigger: CTGCTGGGGCGTTCGAGGCCAGTTCTGTGGCCCCTG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGAGGTCCAGAGTGCCTaGACTGGCTGCGGGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVEVQSA*TGCGSY Trigger: GTAGGACCCGCAGCCAGTGCAGGCACTCTGGACCTC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | ATCATCCAGAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTGAGCGTCCATGCTGGTaGCGGGTGCCCAGATCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IIQRSVRGFPLGPLRLLSERPCW*RVPRSA Trigger: CGCCGATCTGGGCACCCGCCACCAGCATGGACGCTC...ACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTCTGGATGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGAGGATCCGGGACCTTaGCCTGGTAAGAGGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVEDPGP*PGKRTS Trigger: GCTCGTCCTCTTACCAGGTCAAGGTCCCGGATCCTC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCGGAAGGGTCACGGATaGTCTGGAGCGACGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVRKGHG*SGATAS Trigger: AGAAGCCGTCGCTCCAGATCATCCGTGACCCTTCCG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTACTCTGAGATCTTTCTaGGGCACGCGGCGAGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVTLRSF*GTRRAS Trigger: GGACGCTCGCCGCGTGCCGCAGAAAGATCTCAGAGT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000306721.8 ENST00000347703.7 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCCTCCTCCTCCTCCATaGGTAGAGCGTCAAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVPPPPP*VERQGT Trigger: GGTCCCTTGACGCTCTACCCATGGAGGAGGAGGAGG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGGGTCACGGATGATCTaGAGCGACGGCTTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVGSRMI*SDGFWA Trigger: TGCCCAGAAGCCGTCGCTCCAGATCATCCGTGACCC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTAGTCACAGAATTCTCTaGGGGCTGGCGGGACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVSHRIL*GLAGLC Trigger: GCAGAGTCCCGCCAGCCCTCAGAGAATTCTGTGACT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGAGGAGGGGGAATACTaGCACAGGAAACCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVEEGEY*HRKPAQ Trigger: CTGGGCAGGTTTCCTGTGTCAGTATTCCCCCTCCTC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000306721.8 ENST00000347703.7 |
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| CDS-3UTR GCA 90 bp | TCCTACAGCCTTCCCGAACTGACTGCAGCCTCATTCCATCTTGTATCTCACTCTGAGGTCCAGAGTGCCTaGACTGGCTGCGGGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SYSLPELTAASFHLVSHSEVQSA*TGCGSY Trigger: GTAGGACCCGCAGCCAGTGCAGGCACTCTGGACCTC...AGAGTGAGATACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGTAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCGACAAGGCGGGCAATaGCAGTTCGGATCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVRQGGQ*QFGSSR Trigger: TCTGCTGGATCCGAACTGGCATTGCCCGCCTTGTCG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCCTGGTACTCCGCGCTaGAAACTTCATCGCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVPGTPR*KLHRHP Trigger: AGGGTGGCGATGAAGTTTCCAGCGCGGAGTACCAGG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTACAGCCTTCCCGAACTaGCTGCAGCCTCATTCCATC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVTAFPN*LQPHSI Trigger: GATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR TCA 90 bp | GCACAGCAAGGAGAGACCAAACTGCCCAGGATTCAAGGAGGATCATCCAGAGATAGTCACAGAATTCTCTaGGGGCTGGCGGGACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQQGETKLPRIQGGSSRDSHRIL*GLAGLC Trigger: GCAGAGTCCCGCCAGCCCTCAGAGAATTCTGTGACT...ATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTGTTGGTTGCTCCCCTaGTACTCCGCGCTGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVCWLLP*YSALET Trigger: AGTTTCCAGCGCGGAGTACCAGGGGAGCAACCAACA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTCGTCAGAGTCGGCATaGAAAATACCGGCCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVSSESA*KIPASS Trigger: CGAACTGGCCGGTATTTTTCATGCCGACTCTGACGA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR TCA 90 bp | TGCCCAGGATTCAAGGAGGATCATCCAGAGATCTGTCAGGGGGTTTCCTCTAGGTCGTCAGAGTCGGCATaGAAAATACCGGCCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: CPGFKEDHPEICQGVSSRSSESA*KIPASS Trigger: CGAACTGGCCGGTATTTTTCATGCCGACTCTGACGA...CCTAGAGGAAACCCCCTGACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | ACCAAACTGCCCAGGATTCAAGGAGGATCATCCAGAGATCTGTCAGGGGGTTTCTGTTGGTTGCTCCCCTaGTACTCCGCGCTGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: TKLPRIQGGSSRDLSGGFCWLLP*YSALET Trigger: AGTTTCCAGCGCGGAGTACCAGGGGAGCAACCAACA...GAAACCCCCTGACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTGGAGCGACGGCTTCTaGGCAGGTCATCTTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVWSDGF*AGHLHS Trigger: TGAATGAAGATGACCTGCCCAGAAGCCGTCGCTCCA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCCTTCCCGAACTGACTaGAGCCTCATTCCATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVPSRTD*SLIPSC Trigger: ACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCCTTCCCGAACTGACTaGAGCCTCGTGTTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVPSRTD*SLVFAK Trigger: TTTTGCAAACACGAGGCTGCAGTCAGTTCGGGAAGG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000347703.7 |
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| CDS-3UTR CCA 90 bp | TTGATTGCTGCCCATGAGGGGCTTAGTCTAGCTGGGAAGGAAAGAAAGAACCAACCTGGTACTCCGCGCTaGAAACTTCATCGCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LIAAHEGLSLAGKERKNQPGTPR*KLHRHP Trigger: AGGGTGGCGATGAAGTTTCCAGCGCGGAGTACCAGG...TTGGTTCTTTCTTTCCTTCCCAGCTAGACTAAGCCCCTCATGGGCAGCAATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTAGTTCTTCTTTACTCTaGGATCTTTCTGCGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVSSSLL*DLSAAR Trigger: GCGTGCCGCAGAAAGATCTCAGAGTAAAGAAGAACT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000306721.8 ENST00000347703.7 |
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| CDS-3UTR TCA 90 bp | CGGGTCCTACAGCCTTCCCGAACTGACTGCAGCCTCATTCCATCTTGTATCTCAAGTTCTTCTTTACTCTaGGATCTTTCTGCGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: RVLQPSRTDCSLIPSCISSSSLL*DLSAAR Trigger: GCGTGCCGCAGAAAGATCTCAGAGTAAAGAAGAACT...TGAGATACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGTAGGACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR TCA 90 bp | TTGATTGCTGCCCATGAGGGGCTTAGTCTAGCTGGGAAGGAAAGAAAGAACCAAACAGCCTTCCCGAACTaGCTGCAGCCTCATTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LIAAHEGLSLAGKERKNQTAFPN*LQPHSI Trigger: GATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGT...TTGGTTCTTTCTTTCCTTCCCAGCTAGACTAAGCCCCTCATGGGCAGCAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTACTGGGCGAATTATATaGGGAAGGGTCACGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVTGRII*GRVTDD Trigger: ATCATCCGTGACCCTTCCGCATATAATTCGCCCAGT...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTCTCTCGAGAATTGCTaGAGACGTTCTCCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVSLENC*RRSPTP Trigger: AGGAGTTGGAGAACGTCTGCAGCAATTCTCGAGAGA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTCTTCTCTCGAGAATTaGTGCAGACGTTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVSSLEN*CRRSPT Trigger: AGTTGGAGAACGTCTGCAGCAATTCTCGAGAGAAGA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTCGCAATACATGGGATTaGGAGACATCAATCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVRNTWD*ETSICN Trigger: ATTGCAGATTGATGTCTCTCAATCCCATGTATTGCG...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000306721.8 ENST00000347703.7 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGAGATCTGTCAGGGGGTTTCCTCTAGGTCCCCTTCGTTTGTTGAGTAAGGAGAGACCAAACTaGCCAGGATTCAAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIQRSVRGFPLGPLRLLSKERPN*PGFKED Trigger: ATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTT...ACTCAACAAACGAAGGGGACCTAGAGGAAACCCCCTGACAGATCTCTGGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR TCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTTCTTCACTGATATCTaGCCTGAATTTAGGTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVFFTDI*PEFRFR Trigger: ACGAAACCTAAATTCAGGTCAGATATCAGTGAAGAA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTGGTCTAATACATCTTaGACCTCACTTTCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVWSNTS*TSLSEK Trigger: CTTTTCAGAAAGTGAGGTGCAAGATGTATTAGACCA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR GCA 90 bp | TCTTGTATCTCACTCTCTGAGAAACCGCAAAATGATTCATCGTCAGAGTCGGCACCTTCCCGAACTGACTaGAGCCTCATTCCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCISLSEKPQNDSSSESAPSRTD*SLIPSC Trigger: ACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGG...TGCCGACTCTGACGATGAATCATTTTGCGGTTTCTCAGAGAGTGAGATACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR GCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTATTGTGTTTCCAAGTaGTTAGGTTTTATGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVYCVSK*LGFMRA Trigger: AGCCCTCATAAAACCTAAGCACTTGGAAACACAATA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR GCA 90 bp | ACCAAACTGCCCAGGATTCAAGGAGGATCATCCAGAGATCTGTCAGGGGGTTTCTGGTCTAATACATCTTaGACCTCACTTTCGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLPRIQGGSSRDLSGGFWSNTS*TSLSCL Trigger: CAAACACGAAAGTGAGGTGCAAGATGTATTAGACCA...GAAACCCCCTGACAGATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CCA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTGTAAAAATCCACAATaGTCTAATACATCTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KRLERSIGNRGGCCEMGVCKNPQ*SNTSCT Trigger: GGTGCAAGATGTATTAGACCATTGTGGATTTTTACA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS-3UTR CCA 90 bp | CACAGCAAGGAGAGACCAAACTGCCCAGGATTCAAGGAGGATCATCCAGAGATCTGTAAAAATCCACAATaGTCTAATACATCTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HSKERPNCPGFKEDHPEICKNPQ*SNTSCT Trigger: GGTGCAAGATGTATTAGACCATTGTGGATTTTTACA...GATCTCTGGATGATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS CCA 90 bp | ACGCGGCGAGCGTCCATGCTGGTGGCGGGTGCCCAGATCGGCGCTTaGAGCGGGGAGAGCGGAGCAGCCGCGCGGTCAGCGGTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TRRASMLVAGAQIGA*SGESGAAARSAVPQ Trigger: CTGTGGGACCGCTGACCGCGCGGCTGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 ENST00000410101.7 ENST00000435616.5 ENST00000496441.5 |
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| CDS-3UTR CAA 90 bp | GCGGTCTCCTTGATTGCTGCCCATGAGGGGCTTAGTCTAGCTGGGAAGGAAAGATGCCCAGATCGGCGCTaGGAGCGGGGAGAGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSLIAAHEGLSLAGKERCPDRR*ERGERS Trigger: GCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCA...TCTTTCCTTCCCAGCTAGACTAAGCCCCTCATGGGCAGCAATCAAGGAGACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CAA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTTGCCCAGATCGGCGCTaGGAGCGGGGAGAGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRLERSIGNRGGCCEMGVCPDRR*ERGERS Trigger: GCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCA...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CAA 90 bp | CCACAGGAGCACAGCAAGGAGAGACCAAACTGCCCAGGATTCAAGGAGGATCATGCCTTCGCGGTCTCCTaGATTGCTGCCCATGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQEHSKERPNCPGFKEDHAFAVS*IAAHEG Trigger: CCCCTCATGGGCAGCAATCAAGGAGACCGCGAAGGC...ATGATCCTCCTTGAATCCTGGGCAGTTTGGTCTCTCCTTGCTGTGCTCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CAA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGCCTTCGCGGTCTCCTaGATTGTGAGTCGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRLERSIGNRGGCCEMGVAFAVS*IVSRSL Trigger: CAGGCTCCGACTCACAATCAAGGAGACCGCGAAGGC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CAA 90 bp | GAACCAATCAAAAGGAGTTTAGTGCCACAGGAGCACAGCAAGGAGAGACCAAACGGTCCCCTTCGTTTGTaGAGTCGGAGCCTGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPIKRSLVPQEHSKERPNGPLRL*SRSLGG Trigger: CCCTCCCAGGCTCCGACTCAACAAACGAAGGGGACC...GTTTGGTCTCTCCTTGCTGTGCTCCTGTGGCACTAAACTCCTTTTGATTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS-3UTR CAA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGGTTGGAGAGGAGCATaGGAAATAGAGGGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLERSIGNRGGCCEMGVGWRGA*EIEGDA Trigger: AGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 |
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| CDS-3UTR CAA 90 bp | AAGCGGTTGGAGAGGAGCATTGGAAATAGAGGGGGATGCTGTGAGATGGGGGTTGCGCAATACATGGGATaGAGAGACATCAATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KRLERSIGNRGGCCEMGVAQYMG*RDINLQ Trigger: TTGCAGATTGATGTCTCTCAATCCCATGTATTGCGC...AACCCCCATCTCACAGCATCCCCCTCTATTTCCAATGCTCCTCTCCAACCGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000306721.8 ENST00000347703.7 |
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| CDS CCA 90 bp | AGTTCGTTAGTGACATCTGGCCTTGGTTTCTGTAAAAATCCACAATaGTCTAATACATCTTGCACCTCACTTTCTGAAAAGCCGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLVTSGLGFCKNPQ*SNTSCTSLSEKPQK Trigger: TTTCTGCGGCTTTTCAGAAAGTGAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACCAAGGCCAGATGTCACTAACGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS GCA 90 bp | TCTGGCCTTGGTTTCTGTAAAAATCCACAATGGTCTAATACATCTTaGACCTCACTTTCTGAAAAGCCGCAGAAAGATTCATTATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLGFCKNPQWSNTS*TSLSEKPQKDSLSE Trigger: CTCTGATAATGAATCTTTCTGCGGCTTTTCAGAAAGTGAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACCAAGGCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS CCA 90 bp | AGTTCGTTAGTGACATCTGGCCTTGGTTTCTGTAAAAATCCACAATaGTCTAATACATCTTGCACCTCACTTTCGTGTTTGCAAAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVTSGLGFCKNPQ*SNTSCTSLSCLQNY Trigger: ATAATTTTGCAAACACGAAAGTGAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACCAAGGCCAGATGTCACTAACGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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| CDS CCA 72 bp | GCGTCCATGCTGGTGGCGGGTGCCCAGATCGGCGCTTaGAGCGGGGAGAGCGGAGCAGCCGCGCGGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASMLVAGAQIGA*SGESGAAARSA Trigger: CGCTGACCGCGCGGCTGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 ENST00000410101.7 ENST00000435616.5 ENST00000467411.5 ENST00000496441.5 |
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| CDS CAA 90 bp | CACGCGGCGAGCGTCCATGCTGGTGGCGGGTGCCCAGATCGGCGCTaGGAGCGGGGAGAGCGGAGCAGCCGCGCGGTCAGCGGTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HAASVHAGGGCPDRR*ERGERSSRAVSGPT Trigger: TGTGGGACCGCTGACCGCGCGGCTGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 ENST00000410101.7 ENST00000435616.5 ENST00000496441.5 |
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| CDS CCA 72 bp | CTGACTGCAGCCTCGGCACGCGGCGAGCGTCCATGCTaGTGGCGGGTGCCCAGATCGGCGCTTGGAGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTAASARGERPC*WRVPRSALGAG Trigger: CCCCGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCGTGCCGAGGCTGCAGTCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410019.3 |
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| CDS CAA 72 bp | AGCGTCCATGCTGGTGGCGGGTGCCCAGATCGGCGCTaGGAGCGGGGAGAGCGGAGCAGCCGCGCGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVHAGGGCPDRR*ERGERSSRAVS Trigger: GCTGACCGCGCGGCTGCTCCGCTCTCCCCGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000306721.8 ENST00000347703.7 ENST00000410019.3 ENST00000410101.7 ENST00000435616.5 ENST00000467411.5 ENST00000496441.5 |
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| CDS GCA 72 bp | GAACTGACTGCAGCCTCGGCACGCGGCGAGCGTCCATaGTGGTGGCGGGTGCCCAGATCGGCGCTTGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ELTAASARGERP*WWRVPRSALGA Trigger: CGCTCCAAGCGCCGATCTGGGCACCCGCCACCAGCATGGACGCTCGCCGCGTGCCGAGGCTGCAGTCAGTTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410019.3 |
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| CDS CCA 72 bp | GGTGTGCCCAAAACACTACTGTATATAAACAAGAACTaGTACTTACTGAGTCGGAGCCTGGGAGGGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVPKTLLYINKN*YLLSRSLGGDV Trigger: GACATCCCCTCCCAGGCTCCGACTCAGTAAGTACCAGTTCTTGTTTATATACAGTAGTGTTTTGGGCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467411.5 ENST00000496441.5 |
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| CDS GCA 72 bp | GGTTTCTGTAAAAATCCACAATGGTCTAATACATCTTaGACCTCACTTTCTGAAAAGCCGCAGAAAGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: GFCKNPQWSNTS*TSLSEKPQKDS Trigger: TGAATCTTTCTGCGGCTTTTCAGAAAGTGAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306721.8 |
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| CDS GCA 72 bp | GGTTTCTGTAAAAATCCACAATGGTCTAATACATCTTaGACCTCACTTTCGTGTTTGCAAAATTATCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GFCKNPQWSNTS*TSLSCLQNYQK Trigger: CTTCTGATAATTTTGCAAACACGAAAGTGAGGTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435616.5 |
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