Pregenerated sensors for CDCA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000170779Ensembl transcript IDs: ENST00000336219.4, ENST00000392590.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAACTGCAGAAAGGTTGCTaGAGGGTCAGGCCGTGGTCG | + |
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Preference number: 2 (lower is better) Translates to: TSGAVRGRGHPQLQPGAELQKGC*RVRPWS Trigger: CGACCACGGCCTGACCCTCCAGCAACCTTTCTGCAG...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAGTGCTCACGTGTCAATaGGTCAGAGGCGGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEVLTCQ*VRGGCE Trigger: CTCACAGCCGCCTCTGACGCATTGACACGTGAGCAC...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCGAAACAGGGAGCATGTaGGGTGAGGCGGGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GSMRINFRHRGLSEVVDTETGSM*GEAGQE Trigger: CTCCTGCCCCGCCTCACCCCACATGCTCCCTGTTTC...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCAGGGGCCCAGGGCTGTaGGGACGTCAGAAGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSMRINFRHRGLSEVVDTRGPGL*GRQKTR Trigger: TCTTGTCTTCTGACGTCCCCACAGCCCTGGGCCCCT...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGCCCAGGGCAGGTGCATaGGCTGACCCTGATGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: HIPFKLGSMRINFRHRGLPRAGA*ADPDGS Trigger: GCTCCCATCAGGGTCAGCCCATGCACCTGCCCTGGG...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTTCCAGAACAGCCTCTaGCTGGCGCTCCACAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: HIPFKLGSMRINFRHRGLFQNSL*LALHRG Trigger: CCCCCTGTGGAGCGCCAGGCAGAGGCTGTTCTGGAA...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTAGCCTCCAGGAACACTaGCTTGAGAAGGCACCACCG | + |
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Preference number: 2 (lower is better) Translates to: VDTPNSSRALNNVKRICSSLQEH*LEKAPP Trigger: CGGTGGTGCCTTCTCAAGGCAGTGTTCCTGGAGGCT...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTATCCTGCAGAAAGGTTaGTGGAGGGTCAGGCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: VDTPNSSRALNNVKRICSILQKG*WRVRPW Trigger: CCACGGCCTGACCCTCCAGCAACCTTTCTGCAGGAT...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGCTCCGTGGGAGCCAGTaGTCACGTGTCAATGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: HIPFKLGSMRINFRHRGLLRGSQ*SRVNAS Trigger: TGACGCATTGACACGTGAGCACTGGCTCCCACGGAG...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCTTTAATGCAGCCAAGTaGAATTCCTTTCCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: GSMRINFRHRGLSEVVDTFNAAK*NSFPHL Trigger: AAGGTGGGGAAAGGAATTGCACTTGGCTGCATTAAA...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCAATGTAAAAAGAATTTaGTCTGCAACCCTGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSMRINFRHRGLSEVVDTNVKRI*SATLWG Trigger: CCCCCACAGGGTTGCAGAGCAAATTCTTTTTACATT...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGAGGTCTAGGAAGATGTaGCTGTGTGCGGCTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: HIPFKLGSMRINFRHRGLRSRKM*LCAAPD Trigger: ATCAGGAGCCGCACACAGCCACATCTTCCTAGACCT...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACTCAAGGGGTTATGAATaGCATGGATTCAGATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LGSMRINFRHRGLSEVVDSRGYE*HGFRFL Trigger: AAGAAATCTGAATCCATGTCATTCATAACCCCTTGA...GTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CAA 90 bp | CTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACGATCCTGCAGAAAGGTaGCTGGAGGGTCAGGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: LGSMRINFRHRGLSEVVDDPAER*LEGQAV Trigger: CACGGCCTGACCCTCCAGCAACCTTTCTGCAGGATC...GTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CAA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCAAAGGTAAAAGGAGGTaGATGCAGCTGCGGCTCACC | + |
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Preference number: 3 (lower is better) Translates to: GSMRINFRHRGLSEVVDTKGKRR*MQLRLT Trigger: GGTGAGCCGCAGCTGCATCAACCTCCTTTTACCTTT...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTGATACATTCACACTGTaGACTGAGACTGTAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: VDTPNSSRALNNVKRICSDTFTL*TETVVM Trigger: CATCACTACAGTCTCAGTCAACAGTGTGAATGTATC...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| 3UTR-3UTR CAA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGCAATGTAAAAAGAATTaGCTCTGCAACCCTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HIPFKLGSMRINFRHRGLQCKKN*LCNPVG Trigger: CCCCACAGGGTTGCAGAGCAAATTCTTTTTACATTG...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAACTCTGCAGCCTGGGGTaGCACTGTGCGCCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAELCSLG*HCAPRP Trigger: GGGACGTGGCGCACAGTGGCACCCCAGGCTGCAGAG...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAGGATGTGCCCCCTCTTaGCCCCACGCTGCACGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEGCAPS*PHAARH Trigger: GTGCCGTGCAGCGTGGGGGCAAGAGGGGGCACATCC...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAATTCCAGAACAGCCTCTaGCTGGCGCTCCACAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEFQNSL*LALHRG Trigger: CCCCCTGTGGAGCGCCAGGCAGAGGCTGTTCTGGAA...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAACTGGACCCTGTGTGTaGCCGTCCCCCAAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAETGPCV*PSPKPG Trigger: TCCTGGCTTGGGGGACGGCCACACACAGGGTCCAGT...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAGGCTGTCAGAGGTCGTaGACACCCCCAACTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEGCQRS*TPPTPA Trigger: GGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCC...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGAGCGGCGCCCGCTCTaGAGCCTGGGGTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLERRPL*SLGCHC Trigger: ACAGTGGCACCCCAGGCTGCAGAGCGGGCGCCGCTC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGCCCGCTCTGCAGCCTaGGGTGCCACTGTGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLARSAA*GATVRH Trigger: GTGGCGCACAGTGGCACCCCAGGCTGCAGAGCGGGC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAATGTCCAGGAGCGACTaGCGCTGCAGGCTGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEMSRSD*RCRLYE Trigger: CTCATACAGCCTGCAGCGGCAGTCGCTCCTGGACAT...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCTCTGCAGCCTGGGGTaGCACTGTGCGCCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLLCSLG*HCAPRP Trigger: GGGACGTGGCGCACAGTGGCACCCCAGGCTGCAGAG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCGAGCGGCGCCCGCTCTaGAGCCTGGGGTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: GSMRINFRHRGLSEVVDTERRPL*SLGCHC Trigger: ACAGTGGCACCCCAGGCTGCAGAGCGGGCGCCGCTC...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGGATGTGCCCCCTCTTaGCCCCACGCTGCACGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLGCAPS*PHAARH Trigger: GTGCCGTGCAGCGTGGGGGCAAGAGGGGGCACATCC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTGCCAGGAGCAGGATGTaGCCCCTCTTGCCCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGAARSRM*PLLPPR Trigger: GCGTGGGGGCAAGAGGGGGCACATCCTGCTCCTGGC...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGCCAGGAGCAGGATGTaGCCCCTCTTGCCCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLARSRM*PLLPPR Trigger: GCGTGGGGGCAAGAGGGGGCACATCCTGCTCCTGGC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAAGCCTCCAGGAACACTaGCTTGAGAAGGCACCACCG | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAESLQEH*LEKAPP Trigger: CGGTGGTGCCTTCTCAAGGCAGTGTTCCTGGAGGCT...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR TCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCGTCAGAGGCGGCTGTaGGCACTCAGGGCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLRQRRL*ALRAPA Trigger: AGCAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCCCTGGGGTGCCACTGTaGGCCACGTCCCATCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: GSMRINFRHRGLSEVVDTPGVPL*ATSHPA Trigger: CGCAGGATGGGACGTGGCGCACAGTGGCACCCCAGG...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAACTCATCCAGCAGCAATaGTACTTCCTCACCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TSGAVRGRGHPQLQPGAELIQQQ*YFLTQG Trigger: GCCCTGGGTGAGGAAGTAGCATTGCTGCTGGATGAG...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTCCCAGGGCAGGTGCATaGGCTGACCCTGATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGAPRAGA*ADPDGS Trigger: GCTCCCATCAGGGTCAGCCCATGCACCTGCCCTGGG...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCCCAGGGCAGGTGCATaGGCTGACCCTGATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLPRAGA*ADPDGS Trigger: GCTCCCATCAGGGTCAGCCCATGCACCTGCCCTGGG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCTCTTGCCCCCACGCTaGACGGCACAGGATCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLLLPPR*TAQDLR Trigger: ACGGAGATCCTGTGCCGTGCAGCGTGGGGGCAAGAG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGCGCTGCTCTGCAGGTaGCTTGGTGCCTGTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLALLCR*LGACAE Trigger: CTCAGCACAGGCACCAAGGCACCTGCAGAGCAGCGC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTTCCCAGGCGCTGCTCTaGAGGTGCCTTGGTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGASQALL*RCLGAC Trigger: ACAGGCACCAAGGCACCTGCAGAGCAGCGCCTGGGA...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGTCCCAGGCGCTGCTCTaGAGGTGCCTTGGTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLSQALL*RCLGAC Trigger: ACAGGCACCAAGGCACCTGCAGAGCAGCGCCTGGGA...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTCCATCTCCCAGGCGCTaGTCTGCAGGTGCCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGAPSPRR*SAGALV Trigger: CACCAAGGCACCTGCAGAGCAGCGCCTGGGAGATGG...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCCATCTCCCAGGCGCTaGTCTGCAGGTGCCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLPSPRR*SAGALV Trigger: CACCAAGGCACCTGCAGAGCAGCGCCTGGGAGATGG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGACTGGACCCTGTGTGTaGCCGTCCCCCAAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLTGPCV*PSPKPG Trigger: TCCTGGCTTGGGGGACGGCCACACACAGGGTCCAGT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGAAACAGGGAGCATGTaGGGTGAGGCGGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLETGSM*GEAGQE Trigger: CTCCTGCCCCGCCTCACCCCACATGCTCCCTGTTTC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR TCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGGACCGTGTTGGCAATaGGGACTGAGCGGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLGPCWQ*GLSGTG Trigger: ACCTGTGCCGCTCAGTCCTCATTGCCAACACGGTCC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCGCGCTGCTCTGCAGGTaGCTTGGTGCCTGTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GSMRINFRHRGLSEVVDTALLCR*LGACAE Trigger: CTCAGCACAGGCACCAAGGCACCTGCAGAGCAGCGC...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTCTGCAGAAAGGTTGCTaGAGGGTCAGGCCGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGALQKGC*RVRPWS Trigger: CGACCACGGCCTGACCCTCCAGCAACCTTTCTGCAG...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGAGGAGCGACTGCCGCTaGAGGCTGTATGAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLRSDCR*RLYEDT Trigger: AGTGTCCTCATACAGCCTGCAGCGGCAGTCGCTCCT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGATGTCCAGGAGCGACTaGCGCTGCAGGCTGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLMSRSD*RCRLYE Trigger: CTCATACAGCCTGCAGCGGCAGTCGCTCCTGGACAT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTGTGCTCACGTGTCAATaGGTCAGAGGCGGCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LWGRQKTRSLPEQPLPGAVLTCQ*VRGGCE Trigger: CTCACAGCCGCCTCTGACGCATTGACACGTGAGCAC...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGAGCCTCCAGGAACACTaGCTTGAGAAGGCACCACCG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLSLQEH*LEKAPP Trigger: CGGTGGTGCCTTCTCAAGGCAGTGTTCCTGGAGGCT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGCTCATCCAGCAGCAATaGTACTTCCTCACCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLLIQQQ*YFLTQG Trigger: GCCCTGGGTGAGGAAGTAGCATTGCTGCTGGATGAG...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGATGCTCAGTGTCAATaGGTCAGAGGCGGCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLDAQCQ*VRGGCE Trigger: CTCACAGCCGCCTCTGACGCATTGACACTGAGCATC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGGCCCGCTCTGCAGCCTaGGGTGCCACTGTGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLARSAA*GATVRH Trigger: GTGGCGCACAGTGGCACCCCAGGCTGCAGAGCGGGC...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | CTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACAGGGGCCCAGGGCTGTaGGGACGTCAGAAGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: LGSMRINFRHRGLSEVVDRGPGL*GRQKTR Trigger: TCTTGTCTTCTGACGTCCCCACAGCCCTGGGCCCCT...GTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGAGGTCTAGGAAGATGTaGCTGTGTGCGGCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLRSRKM*LCAAPD Trigger: ATCAGGAGCCGCACACAGCCACATCTTCCTAGACCT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR TCA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTGGACCGTGTTGGCAATaGGGACTGAGCGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDTPNSSRALNNVKRICSGPCWQ*GLSGTG Trigger: ACCTGTGCCGCTCAGTCCTCATTGCCAACACGGTCC...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR TCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGCGTCAGAGGCGGCTGTaGGCACTCAGGGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLRQRRL*ALRAPA Trigger: AGCAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACG...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCAGGTCTAGGAAGATGTaGCTGTGTGCGGCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GSMRINFRHRGLSEVVDTRSRKM*LCAAPD Trigger: ATCAGGAGCCGCACACAGCCACATCTTCCTAGACCT...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGCTCTTGCCCCCACGCTaGACGGCACAGGATCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLLLPPR*TAQDLR Trigger: ACGGAGATCCTGTGCCGTGCAGCGTGGGGGCAAGAG...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTCTCCGTGGGAGCCAGTaGTCACGTGTCAATGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: VDTPNSSRALNNVKRICSLRGSQ*SRVNAS Trigger: TGACGCATTGACACGTGAGCACTGGCTCCCACGGAG...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGGAAACAGGGAGCATGTaGGGTGAGGCGGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLETGSM*GEAGQE Trigger: CTCCTGCCCCGCCTCACCCCACATGCTCCCTGTTTC...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGAGGAGCGACTGCCGCTaGAGGCTGTATGAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLRSDCR*RLYEDT Trigger: AGTGTCCTCATACAGCCTGCAGCGGCAGTCGCTCCT...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGATCCTGCAGAAAGGTTaGTGGAGGGTCAGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLILQKG*WRVRPW Trigger: CCACGGCCTGACCCTCCAGCAACCTTTCTGCAGGAT...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR TCA 90 bp | CACATACCCTTTAAACTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGAAGGTAAAAGGAGGTTaGTGCAGCTGCGGCTCACCG | + |
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Preference number: 4 (lower is better) Translates to: HIPFKLGSMRINFRHRGLKVKGG*CSCGSP Trigger: CGGTGAGCCGCAGCTGCATCAACCTCCTTTTACCTT...CAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAGTTTAAAGGGTATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR TCA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGTCAAGGGGTTATGAATaGCATGGATTCAGATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLSRGYE*HGFRFL Trigger: AAGAAATCTGAATCCATGTCATTCATAACCCCTTGA...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR GCA 90 bp | CTAGGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACTTTAATGCAGCCAAGTaGAATTCCTTTCCCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LGSMRINFRHRGLSEVVDFNAAK*NSFPHL Trigger: AAGGTGGGGAAAGGAATTGCACTTGGCTGCATTAAA...GTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR GCA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTAATGTAAAAAGAATTTaGTCTGCAACCCTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: VDTPNSSRALNNVKRICSNVKRI*SATLWG Trigger: CCCCCACAGGGTTGCAGAGCAAATTCTTTTTACATT...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAATCGCCCAGGTCGGACTaGCAGCTGGAGCTAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: TSGAVRGRGHPQLQPGAESPRSD*QLELGP Trigger: AGGCCCTAGCTCCAGCTGCAAGTCCGACCTGGGCGA...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | CTGTGGGGACGTCAGAAGACAAGAAGCCTTCCAGAACAGCCTCTGCCTGGCGCTAGGATGTGCCCCCTCTaGCCCCCACGCTGCACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWGRQKTRSLPEQPLPGARMCPL*PPRCTA Trigger: TGCCGTGCAGCGTGGGGGCAAGAGGGGGCACATCCT...AGCGCCAGGCAGAGGCTGTTCTGGAAGGCTTCTTGTCTTCTGACGTCCCCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGAGGATGTGCCCCCTCTaGCCCCCACGCTGCACGGCA | + |
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Preference number: 5 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLRMCPL*PPRCTA Trigger: TGCCGTGCAGCGTGGGGGCAAGAGGGGGCACATCCT...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CAA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAAAAAGGTAAAAGGAGGTaGATGCAGCTGCGGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEKGKRR*MQLRLT Trigger: GGTGAGCCGCAGCTGCATCAACCTCCTTTTACCTTT...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGTCCTCGTGCAAACATaGTGTCCTGACCCGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLVLVQT*CPDPRG Trigger: GCCTCGCGGGTCAGGACACAATGTTTGCACGAGGAC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CAA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCGATCCTGCAGAAAGGTaGCTGGAGGGTCAGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSMRINFRHRGLSEVVDTDPAER*LEGQAV Trigger: CACGGCCTGACCCTCCAGCAACCTTTCTGCAGGATC...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | ACATCGGGGGCTGTCAGAGGTCGTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTaGCTCTGCAACCCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGAVRGRGHPQLQPGAEQCKKN*LCNPVG Trigger: CCCCACAGGGTTGCAGAGCAAATTCTTTTTACATTG...TTCAGCGCCCGGCTGGAGTTGGGGGTGTCCACGACCTCTGACAGCCCCCGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | GTGGACACCCCCAACTCCAGCCGGGCGCTGAACAATGTAAAAAGAATTTGCTCTGTCCTCGTGCAAACATaGTGTCCTGACCCGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VDTPNSSRALNNVKRICSVLVQT*CPDPRG Trigger: GCCTCGCGGGTCAGGACACAATGTTTGCACGAGGAC...AGAGCAAATTCTTTTTACATTGTTCAGCGCCCGGCTGGAGTTGGGGGTGTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS-3UTR CAA 90 bp | AGTGATGCTCAGTGTCAATGCGTCAGAGGCGGCTGTGAGCACTCAGGGCTCCTGGATACATTCACACTGTaGACTGAGACTGTAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SDAQCQCVRGGCEHSGLLDTFTL*TETVVM Trigger: CATCACTACAGTCTCAGTCAACAGTGTGAATGTATC...CAGGAGCCCTGAGTGCTCACAGCCGCCTCTGACGCATTGACACTGAGCATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392590.3 |
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| CDS-3UTR CAA 90 bp | GGGTCCATGAGGATTAACTTTCGACATCGGGGGCTGTCAGAGGTCGTGGACACCGATACATTCACACTGTaGACTGAGACTGTAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSMRINFRHRGLSEVVDTDTFTL*TETVVM Trigger: CATCACTACAGTCTCAGTCAACAGTGTGAATGTATC...GGTGTCCACGACCTCTGACAGCCCCCGATGTCGAAAGTTAATCCTCATGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336219.4 |
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| CDS GCA 72 bp | GCCAGGAGCAGGATGTGCCCCCTCTTGCCCCCACGCTaGACGGCACAGGATCTCCGTGGAGACCAAGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARSRMCPLLPPR*TAQDLRGDQAV Trigger: GACCGCTTGGTCTCCACGGAGATCCTGTGCCGTGCAGCGTGGGGGCAAGAGGGGGCACATCCTGCTCCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000336219.4 ENST00000392590.3 |
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| CDS GCA 72 bp | AGCTGCAACTTCACCAGAGACATGTCCAGGAGCGACTaGCGCTGCAGGCTGTATGAGGACACTGTCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCNFTRDMSRSD*RCRLYEDTVFK Trigger: CTTGAAGACAGTGTCCTCATACAGCCTGCAGCGGCAGTCGCTCCTGGACATGTCTCTGGTGAAGTTGCAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336219.4 ENST00000392590.3 |
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