RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC73 (Homo sapiens)

Ensembl gene IDs: ENSG00000134371

Ensembl transcript IDs: ENST00000367435.5, ENST00000482484.1, ENST00000635846.1, ENST00000643006.1, ENST00000643784.1, ENST00000647662.1, ENST00000648071.1, ENST00000649606.1, ENST00000649613.1, ENST00000649895.1, ENST00000650197.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACAAAAACGGCTACAACGCGGTCCCAG +
Preference number: 1 (lower is better)
Translates to: STGDPSGKSHGQPLN*HAGPCTKTATTRSQ
Trigger: CTGGGACCGCGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR TCA 90 bp ATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTaGACTGCCATGCAGGACCCTGCACAAAAACGGCTACAACGCGGT +
Preference number: 1 (lower is better)
Translates to: IYQLVIHQAKAMANL*TAMQDPAQKRLQRG
Trigger: ACCGCGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR TCA 90 bp TCAGACAAAGACCTAATCTGTTCAGTCTGTACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCCAATCTCTCTTTATCAAGGCGCACA +
Preference number: 1 (lower is better)
Translates to: SDKDLICSVCTIPSL*PSKRAANLSLSRRT
Trigger: TGTGCGCCTTGATAAAGAGAGATTGGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGTACAGACTGAACAGATTAGGTCTTTGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR GCA 90 bp TGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGCTTTAACTaGAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACA +
Preference number: 1 (lower is better)
Translates to: WIQTNFIILQMEGFN*RSWPNDRRKMYADT
Trigger: TGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
3UTR-3UTR CCA 90 bp TTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: LGQVAVQVHALLLWLLQINCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...AATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR CAA 90 bp AATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCCTGCACAAAAACGGCTACAACGCGG +
Preference number: 2 (lower is better)
Translates to: NISTGDPSGKSHGQP*NCHAGPCTKTATTR
Trigger: CCGCGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR-3UTR GCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACA +
Preference number: 2 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTGQPLN*HAGPCT
Trigger: TGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCC...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643006.1
3UTR-3UTR CCA 90 bp AAATTCTTTCCTGTGCTTTGTAAGATAGTTGTTCGTGTCCTCCATACTCTCTCTGTAATCCCAACACTTTaGGAGGTCGAGGCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: KFFPVLCKIVVRVLHTLSVIPTL*EVEAGG
Trigger: TCCGCCCGCCTCGACCTCCCAAAGTGTTGGGATTAC...AGAGAGAGTATGGAGGACACGAACAACTATCTTACAAAGCACAGGAAAGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR TCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 2 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 2 (lower is better)
Translates to: ISKGALLSILADVDASPLQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR TCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAGGCAAATGGTCACTTaGTGTACCTTGGATGCAACA +
Preference number: 2 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIRQMVT*CTLDAT
Trigger: TGTTGCATCCAAGGTACATCAAGTGACCATTTGCCT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTGAAGGTAGTTCATACTaGCTTGTAGTAGTCTTGACA +
Preference number: 2 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSEGSSY*LVVVLT
Trigger: TGTCAAGACTACTACAAGTCAGTATGAACTACCTTC...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR GCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR-3UTR CCA 90 bp GGCAGCCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAATTCGTGGAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: GSQSLFIKAHTLFILNSWKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...CCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR GCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 2 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643006.1
3UTR-3UTR CCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAGCAAATGTTTTCTTTaGTGCCTGGGAGTTTATCAA +
Preference number: 2 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSSKCFL*CLGVYQ
Trigger: TTGATAAACTCCCAGGCACCAAAGAAAACATTTGCT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAAGGTTCAAGGCAAATaGTCACTTGATGTACCTTGG +
Preference number: 2 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIKVQGK*SLDVPW
Trigger: CCAAGGTACATCAAGTGACCATTTGCCTTGAACCTT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643006.1
3UTR-3UTR CCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 2 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR-3UTR TCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 2 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643006.1
3UTR-3UTR CCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAAGGTTCAAGGCAAATaGTCACTTGATGTACCTTGG +
Preference number: 2 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTKVQGK*SLDVPW
Trigger: CCAAGGTACATCAAGTGACCATTTGCCTTGAACCTT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTTTCCTTTACAGGTTaGGCATACAAGGGTATCTCC +
Preference number: 2 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLFSFTG*AYKGIS
Trigger: GGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTACAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 2 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 2 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCACAGATTCTGGTCCTTaGCTATTTCATCATGGAGAA +
Preference number: 2 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTTDSGP*LFHHGE
Trigger: TTCTCCATGATGAAATAGTCAAGGACCAGAATCTGT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR TCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTACAGATTCTGGTCCTTaGCTATTTCATCATGGAGAA +
Preference number: 2 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSTDSGP*LFHHGE
Trigger: TTCTCCATGATGAAATAGTCAAGGACCAGAATCTGT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTCACATCCCTTTGCTTaGTTTTGGATGTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYSHPFA*FWMFQR
Trigger: TCTCTGGAACATCCAAAACCAAGCAAAGGGATGTGA...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGACTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 2 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR-3UTR GCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCCACTGTGTTAAGTACTaGTATATAGGACCATGTCAT +
Preference number: 2 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTHCVKY*YIGPCH
Trigger: ATGACATGGTCCTATATAGCAGTACTTAACACAGTG...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR GCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCACTGTGTTAAGTACTaGTATATAGGACCATGTCAT +
Preference number: 2 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSHCVKY*YIGPCH
Trigger: ATGACATGGTCCTATATAGCAGTACTTAACACAGTG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGCCATTTCTGAACATTTaGATCCAGACGAACTTCATC +
Preference number: 2 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLPFLNI*IQTNFI
Trigger: GATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGG...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
3UTR-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATAGTAATTTAAAATGCTaGCTGTTCCCTTCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYSNLKC*LFPSEE
Trigger: CTCTTCAGAAGGGAACAGTCAGCATTTTAAATTACT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTCATGGGAGAATAAATaGGAGTGGCTGAAAATTTTT +
Preference number: 2 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSWENK*EWLKIF
Trigger: AAAAATTTTCAGCCACTCCCATTTATTCTCCCATGA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
3UTR CAA 90 bp AAACTCCTCTGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTaGATAGTAGATCTTTTCTTAGCCATAATTTTGGCTTTGATTGCA +
Preference number: 2 (lower is better)
Translates to: KLLCLRAVMSSSRSV*IVDLFLAIILALIA
Trigger: TGCAATCAAAGCCAAAATTATGGCTAAGAAAAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACAGAGGAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
3UTR-3UTR GCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTTGATGTACCTTGGATaGAACATTTTGTCTGAAGTA +
Preference number: 2 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSLMYLG*NILSEV
Trigger: TACTTCAGACAAAATGTTGCATCCAAGGTACATCAA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR GCA 72 bp ATCAGGCAAAAGCCATGGCCAACCTTTGAACTGCCATaGAGGACCCTGCACAAAAACGGCTACAACGCGGTC +
Preference number: 3 (lower is better)
Translates to: IRQKPWPTFELP*RTLHKNGYNAV
Trigger: GACCGCGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR TCA 72 bp CTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTaGACTGCCATGCAGGACCCTGCACAAAAACGGCTA +
Preference number: 3 (lower is better)
Translates to: LVIHQAKAMANL*TAMQDPAQKRL
Trigger: TAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR GCA 72 bp GATCCATCAGGCAAAAGCCATGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACAAAAACGGCTACAACG +
Preference number: 3 (lower is better)
Translates to: DPSGKSHGQPLN*HAGPCTKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR-3UTR CAA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGTGTAATCCCAACACTTaGGGAGGTCGAGGCGGGCGG +
Preference number: 3 (lower is better)
Translates to: ISKGALLSILADVDASPLCNPNT*GGRGGR
Trigger: CCGCCCGCCTCGACCTCCCAAAGTGTTGGGATTACA...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR CAA 90 bp TGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTGACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 3 (lower is better)
Translates to: WGRSLFRCTPFFSGFYRLTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...CAATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR CCA 72 bp TTTGAATCTTTCCTGATCGTATCTGTTATAGGCAGCTaGGATAGGCTGTTTGGTGCGCAAAGTGGGATCCAC +
Preference number: 3 (lower is better)
Translates to: FESFLIVSVIGS*DRLFGAQSGIH
Trigger: GTGGATCCCACTTTGCGCACCAAACAGCCTATCCCAGCTGCCTATAACAGATACGATCAGGAAAGATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
3UTR TCA 72 bp GACCTAATCTGTTCAGTCTGTACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCCAATCTCTCTTTATCA +
Preference number: 3 (lower is better)
Translates to: DLICSVCTIPSL*PSKRAANLSLS
Trigger: TGATAAAGAGAGATTGGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGTACAGACTGAACAGATTAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR CCA 72 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTaGCCGAACGACAGAAGGAAAATGTACGCAGACACA +
Preference number: 3 (lower is better)
Translates to: IILQMEGFNCRS*PNDRRKMYADT
Trigger: TGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
3UTR-3UTR CAA 90 bp CAGCCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAATTCGTGGTTGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 3 (lower is better)
Translates to: QPISLYQGAHTLHPQFVVVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...AACCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR CAA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGTCACATCCCTTTGCTaGGTTTTGGATGTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLVTSLC*VLDVPE
Trigger: CTCTGGAACATCCAAAACCAAGCAAAGGGATGTGAC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAAGCAAATGTTTTCTTaGGTGCCTGGGAGTTTATCA +
Preference number: 3 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSKQMFS*VPGSLS
Trigger: TGATAAACTCCCAGGCACCAAAGAAAACATTTGCTT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTTACAGATTCTGGTCCTaGACTATTTCATCATGGAGA +
Preference number: 3 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSYRFWS*TISSWR
Trigger: TCTCCATGATGAAATAGTCAAGGACCAGAATCTGTA...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGGTCACATCCCTTTGCTaGGTTTTGGATGTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMVTSLC*VLDVPE
Trigger: CTCTGGAACATCCAAAACCAAGCAAAGGGATGTGAC...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAAGGCAAATGGTCACTaGATGTACCTTGGATGCAAC +
Preference number: 3 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSKANGH*MYLGCN
Trigger: GTTGCATCCAAGGTACATCAAGTGACCATTTGCCTT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAAGGCAAATGGTCACTaGATGTACCTTGGATGCAAC +
Preference number: 3 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTKANGH*MYLGCN
Trigger: GTTGCATCCAAGGTACATCAAGTGACCATTTGCCTT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR TCA 72 bp TTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTaGGATATCCAAGTAGATCTTTTCGATCAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: FCLYLPMLTLHH*DIQVDLFDQVF
Trigger: GAAGACCTGATCGAAAAGATCTACTTGGATATCTCAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR-3UTR CAA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 3 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
3UTR-3UTR CAA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAAATAGTCACATCCCTTaGCTTGGTTTTGGATGTTCC +
Preference number: 3 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLNSHIP*LGFGCS
Trigger: GGAACATCCAAAACCAAGCAAAGGGATGTGACTATT...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAATAGTCACATCCCTTaGCTTGGTTTTGGATGTTCC +
Preference number: 3 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSNSHIP*LGFGCS
Trigger: GGAACATCCAAAACCAAGCAAAGGGATGTGACTATT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATATGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 3 (lower is better)
Translates to: CARHCVKYCYIGPCHGRICKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAAGCAAATGTTTTCTTaGGTGCCTGGGAGTTTATCA +
Preference number: 3 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSKQMFS*VPGSLS
Trigger: TGATAAACTCCCAGGCACCAAAGAAAACATTTGCTT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTACAGATTCTGGTCCTaGACTATTTCATCATGGAGA +
Preference number: 3 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTYRFWS*TISSWR
Trigger: TCTCCATGATGAAATAGTCAAGGACCAGAATCTGTA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 3 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 3 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSCKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAAGGCAAATGGTCACTaGATGTACCTTGGATGCAAC +
Preference number: 3 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSKANGH*MYLGCN
Trigger: GTTGCATCCAAGGTACATCAAGTGACCATTTGCCTT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR-3UTR CAA 90 bp CTCCGTTACAGATTTCAGTGTCATACCATGGTAGGTTCCCATAGTGTCAATTTTCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 3 (lower is better)
Translates to: LRYRFQCHTMVGSHSVNFQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...AAAATTGACACTATGGGAACCTACCATGGTATGACACTGAAATCTGTAACGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648071.1
3UTR GCA 72 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATaGTTTACCATGTACCTGTCCAATGTTTCCCAAAAC +
Preference number: 3 (lower is better)
Translates to: RSQIIQNLKCDL*FTMYLSNVSQN
Trigger: GTTTTGGGAAACATTGGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
3UTR-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAATAGTCACATCCCTTaGCTTGGTTTTGGATGTTCC +
Preference number: 3 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSNSHIP*LGFGCS
Trigger: GGAACATCCAAAACCAAGCAAAGGGATGTGACTATT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR TCA 72 bp AAAACTCTCCAAATGATTCTAAAATGCAGTCAGGGTTaGGAGCAACTGATTGAAACCTACATATTTCTTACT +
Preference number: 3 (lower is better)
Translates to: KTLQMILKCSQG*EQLIETYIFLT
Trigger: AGTAAGAAATATGTAGGTTTCAATCAGTTGCTCTCAACCCTGACTGCATTTTAGAATCATTTGGAGAGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTGTGGGCTGCAGGAGTCTaGGTCTTCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: WGRSLFRCTPFFSGFYRLWAAGV*VFRADA
Trigger: TGCATCTGCCCGGAAGACTCAGACTCCTGCAGCCCA...CAATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR GCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTAGTGGGATCCACAGGTaGTGCATTTGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFSGIHR*CIWGRS
Trigger: CGACCTGCCCCAAATGCAGCACCTGTGGATCCCACT...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR TCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFTIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR GCA 90 bp TGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGGTCGCTGTTCAGGTaGACGCCCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CIWGRSLFRCTPFFSGFYRSLFR*TPFFSG
Trigger: GCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCT...GTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp TGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACCACAGGTGCTGCATTTaGGGCAGGTCGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CIWGRSLFRCTPFFSGFYHRCCI*GRSLFR
Trigger: CCTGAACAGCGACCTGCCCCAAATGCAGCACCTGTG...GTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR GCA 90 bp AGTTGTTCGTGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCCGCTGCCGCCGCGCCTaGCTCCTTCTTCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: SCSCPPYSLSADNISGHIRCRRA*LLLLLS
Trigger: CGACAAGAGAAGAAGGAGGCAGGCGCGGCGGCAGCG...GATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACACGAACAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643784.1
CDS-3UTR CCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFWSSHS*ARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR TCA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGGGGGGAGGTCTTGCTTaGGAAACTGGTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTGGGLA*ETGLGT
Trigger: AGTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCC...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTGGGATCCACAGGTGCTaGATTTGGGGCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFGIHRC*IWGRSL
Trigger: CAGCGACCTGCCCCAAATGCAGCACCTGTGGATCCC...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CCA 90 bp TTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTGTTTGGTGCGCAAAGTaGGATCCACAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LGQVAVQVHALLLWLLQIVWCAK*DPQVLH
Trigger: ATGCAGCACCTGTGGATCCCACTTTGCGCACCAAAC...AATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGTTGAGAAACTGGTCTTaGTACTGGCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTLRNWS*YWLGCR
Trigger: CCTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAA...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
3UTR CAA 72 bp ACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCCTGCACAAAAACGGCT +
Preference number: 4 (lower is better)
Translates to: TGDPSGKSHGQP*NCHAGPCTKTA
Trigger: AGCCGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR TCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTATACTCTCTCTCTGCTaGCAATATCTCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFILSLC*QYLGSH
Trigger: ATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTAT...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR TCA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGCAGCAGCCGCAGCCCTaGCATGCCAGCATTTTTAGC +
Preference number: 4 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRQQPQP*HASIFS
Trigger: GCTAAAAATGCTGGCATGTCAGGGCTGCGGCTGCTG...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATACGCTGCCGCCGCGCCTaGCTCCTTCTTCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIRCRRA*LLLLLS
Trigger: CGACAAGAGAAGAAGGAGGCAGGCGCGGCGGCAGCG...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAGTGGGATCCACAGGTaGTGCATTTGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRSGIHR*CIWGRS
Trigger: CGACCTGCCCCAAATGCAGCACCTGTGGATCCCACT...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CCA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp TGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTGATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WGRSLFRCTPFFSGFYRLMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...CAATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGCACAGGTGCTGCATTTaGGGCAGGTCGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRHRCCI*GRSLFR
Trigger: CCTGAACAGCGACCTGCCCCAAATGCAGCACCTGTG...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR TCA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRTIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp CAGCCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAATTCGTGGTTAGGTCGCTGTTCAGGTaGACGCCCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QPISLYQGAHTLHPQFVVRSLFR*TPFFSG
Trigger: GCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCT...AACCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR GCA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFGQPLN*HAGPCT
Trigger: TGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCC...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CCA 90 bp TGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTACCTCAGCGTTTGGTGCGCAAAGTaGGATCCACAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CPPYSLSADNISGHIYLSVWCAK*DPQVLH
Trigger: ATGCAGCACCTGTGGATCCCACTTTGCGCACCAAAC...GCTGAGGTAGATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
3UTR CAA 72 bp GTGTTCGAGATCCTTTCTTCTGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTGGTACTGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VFEILSSDLGEV*LEKLVLVLAGL
Trigger: CAGCCCAGCCAGTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGATCTCGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSTIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATATGGGCTGCAGGAGTCTaGGTCTTCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIWAAGV*VFRADA
Trigger: TGCATCTGCCCGGAAGACTCAGACTCCTGCAGCCCA...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGATGGGCTGCAGGAGTCTaGGTCTTCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRWAAGV*VFRADA
Trigger: TGCATCTGCCCGGAAGACTCAGACTCCTGCAGCCCA...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCGCTGCCGCCGCGCCTaGCTCCTTCTTCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYRCRRA*LLLLLS
Trigger: CGACAAGAGAAGAAGGAGGCAGGCGCGGCGGCAGCG...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCCGCTGCCGCCGCGCCTaGCTCCTTCTTCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSRCRRA*LLLLLS
Trigger: CGACAAGAGAAGAAGGAGGCAGGCGCGGCGGCAGCG...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000650197.1
CDS-3UTR GCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGAGGGATCCACAGGTGCTaGATTTGGGGCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRGIHRC*IWGRSL
Trigger: CAGCGACCTGCCCCAAATGCAGCACCTGTGGATCCC...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGAGGTCGCTGTTCAGGTaGACGCCCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLRSLFR*TPFFSG
Trigger: GCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCT...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTAGGTCGCTGTTCAGGTaGACGCCCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVRSLFR*TPFFSG
Trigger: GCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCT...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTGGGATCCACAGGTGCTaGATTTGGGGCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSGIHRC*IWGRSL
Trigger: CAGCGACCTGCCCCAAATGCAGCACCTGTGGATCCC...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGGGATCCACAGGTGCTaGATTTGGGGCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLGIHRC*IWGRSL
Trigger: CAGCGACCTGCCCCAAATGCAGCACCTGTGGATCCC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTAGTGGGATCCACAGGTaGTGCATTTGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVSGIHR*CIWGRS
Trigger: CGACCTGCCCCAAATGCAGCACCTGTGGATCCCACT...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTTGCCATGCAGGACCCTaGACAAAAACGGCTACAACG +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSCHAGP*TKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCA...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGTGCCATGCAGGACCCTaGACAAAAACGGCTACAACG +
Preference number: 4 (lower is better)
Translates to: ISKGALLSILADVDASPLCHAGP*TKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCA...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR GCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTTGCCATGCAGGACCCTaGACAAAAACGGCTACAACG +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCCHAGP*TKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCA...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGGAGATCACGCCAAGCTaGACGTCGGACATAAACAGG +
Preference number: 4 (lower is better)
Translates to: ISKGALLSILADVDASPLEITPS*TSDINR
Trigger: CCTGTTTATGTCCGACGTGCAGCTTGGCGTGATCTC...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CCA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ISKGALLSILADVDASPLWSSHS*ARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGCACAGGTGCTGCATTTaGGGCAGGTCGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRHRCCI*GRSLFR
Trigger: CCTGAACAGCGACCTGCCCCAAATGCAGCACCTGTG...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp AGTTGTTCGTGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTCTTGCTTGAGAAACTaGTCTTGGTACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCSCPPYSLSADNISGHISCLRN*SWYWLG
Trigger: GCCCAGCCAGTACCAAGACCAGTTTCTCAAGCAAGA...GATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACACGAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTGGGCTGCAGGAGTCTaGGTCTTCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYWAAGV*VFRADA
Trigger: TGCATCTGCCCGGAAGACTCAGACTCCTGCAGCCCA...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCTGGGCTGCAGGAGTCTaGGTCTTCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVWAAGV*VFRADA
Trigger: TGCATCTGCCCGGAAGACTCAGACTCCTGCAGCCCA...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTCGAGATCCTTTCTTCTaGTTTGGGGGAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCRDPFF*FGGGLA
Trigger: AGCAAGACCTCCCCCAAATCAGAAGAAAGGATCTCG...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp AAATTCTTTCCTGTGCTTTGTAAGATAGTTGTTCGTGTCCTCCATACTCTCTCTGGGATCCACAGGTGCTaGATTTGGGGCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: KFFPVLCKIVVRVLHTLSGIHRC*IWGRSL
Trigger: CAGCGACCTGCCCCAAATGCAGCACCTGTGGATCCC...AGAGAGAGTATGGAGGACACGAACAACTATCTTACAAAGCACAGGAAAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR GCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAGTGGGATCCACAGGTaGTGCATTTGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTSGIHR*CIWGRS
Trigger: CGACCTGCCCCAAATGCAGCACCTGTGGATCCCACT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTGGTACTGGCTGGGCTaGAGGAGTCTGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSWYWLG*RSLSLP
Trigger: CGGAAGACTCAGACTCCTGCAGCCCAGCCAGTACCA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGTACTGGCTGGGCTaGAGGAGTCTGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLWYWLG*RSLSLP
Trigger: CGGAAGACTCAGACTCCTGCAGCCCAGCCAGTACCA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLGQPLN*HAGPCT
Trigger: TGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCC...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp GGCAGCCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAATTCGTGGCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSQSLFIKAHTLFILNSWPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...CCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCACAGGTGCTGCATTTaGGGCAGGTCGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSHRCCI*GRSLFR
Trigger: CCTGAACAGCGACCTGCCCCAAATGCAGCACCTGTG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CCA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGCCATTTCTGAACATTTaGATCCAGACGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTPFLNI*IQTNFI
Trigger: GATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGG...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp CTCCGTTACAGATTTCAGTGTCATACCATGGTAGGTTCCCATAGTGTCAATTTTGTAATCCCAACACTTTaGGAGGTCGAGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LRYRFQCHTMVGSHSVNFVIPTL*EVEAGG
Trigger: TCCGCCCGCCTCGACCTCCCAAAGTGTTGGGATTAC...AAAATTGACACTATGGGAACCTACCATGGTATGACACTGAAATCTGTAACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGGGGGGAGGTCTTGCTTaGGAAACTGGTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRGGGLA*ETGLGT
Trigger: AGTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCC...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATAGGTCGCTGTTCAGGTaGACGCCCTTCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYRSLFR*TPFFSG
Trigger: GCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR GCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGTGGTACTGGCTGGGCTaGAGGAGTCTGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMWYWLG*RSLSLP
Trigger: CGGAAGACTCAGACTCCTGCAGCCCAGCCAGTACCA...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCTGGTACTGGCTGGGCTaGAGGAGTCTGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVWYWLG*RSLSLP
Trigger: CGGAAGACTCAGACTCCTGCAGCCCAGCCAGTACCA...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTGGTACTGGCTGGGCTaGAGGAGTCTGAGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLWYWLG*RSLSLP
Trigger: CGGAAGACTCAGACTCCTGCAGCCCAGCCAGTACCA...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATATGCCATGCAGGACCCTaGACAAAAACGGCTACAACG +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRICHAGP*TKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCA...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAGTCTTCCGGGCAGATaGACCCTCCTTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSLPGR*TLLSCA
Trigger: AGCACAGGAAAGGAGGGTGCATCTGCCCGGAAGACT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635846.1
CDS-3UTR GCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGAGACGTCGAGGAGGATaGCGTAAAGAGTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRRRRGG*RKESQQ
Trigger: CTGCTGTGACTCTTTACGGCATCCTCCTCGACGTCT...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRWSSHS*ARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGGTTTGGTGCGCAAAGTaGGATCCACAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRVWCAK*DPQVLH
Trigger: ATGCAGCACCTGTGGATCCCACTTTGCGCACCAAAC...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCATTGAGAAACTGGTCTTaGTACTGGCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPLRNWS*YWLGCR
Trigger: CCTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAA...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYTIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTATACTCTCTCTCTGCTaGCAATATCTCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSILSLC*QYLGSH
Trigger: ATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTAT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCGGGGGAGGTCTTGCTTaGGAAACTGGTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTGGGLA*ETGLGT
Trigger: AGTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCC...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGACGAGATCCTTTCTTCTaGTTTGGGGGAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRRDPFF*FGGGLA
Trigger: AGCAAGACCTCCCCCAAATCAGAAGAAAGGATCTCG...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp CTCTGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTTGATAGTAGATCTTAGTGGGATCCACAGGTaGTGCATTTGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LCLRAVMSSSRSVLIVDLSGIHR*CIWGRS
Trigger: CGACCTGCCCCAAATGCAGCACCTGTGGATCCCACT...AAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR GCA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTAGTCTTCCGGGCAGATaGACCCTCCGTTACAGATTT +
Preference number: 4 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVSLPGR*TLRYRF
Trigger: AAATCTGTAACGGAGGGTGCATCTGCCCGGAAGACT...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGCCATGCAGGACCCTaGACAAAAACGGCTACAACG +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLCHAGP*TKTATT
Trigger: CGTTGTAGCCGTTTTTGTGCAGGGTCCTGCATGGCA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGCCAACCTTTGAACTaGCATGCAGGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYGQPLN*HAGPCT
Trigger: TGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCC...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCTISFF*MLYCRR
Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATTGT...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGTTTGGTGCGCAAAGTaGGATCCACAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLVWCAK*DPQVLH
Trigger: ATGCAGCACCTGTGGATCCCACTTTGCGCACCAAAC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTTGAGAAACTGGTCTTaGTACTGGCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTLRNWS*YWLGCR
Trigger: CCTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGTCATGGGAGAATAAATaGGAGTGGCTGAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTSWENK*EWLKIF
Trigger: AAAAATTTTCAGCCACTCCCATTTATTCTCCCATGA...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGGGGGGAGGTCTTGCTTaGGAAACTGGTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMGGGLA*ETGLGT
Trigger: AGTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCC...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCCGAGATCCTTTCTTCTaGTTTGGGGGAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTRDPFF*FGGGLA
Trigger: AGCAAGACCTCCCCCAAATCAGAAGAAAGGATCTCG...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAATATATCAACTGGTaGTCCATCAGGCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRKYINW*SIRQKP
Trigger: TGGCTTTTGCCTGATGGATCACCAGTTGATATATTT...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR TCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAAGTCTTCCGGGCAGATaGACCCTCCGTTACAGATTT +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLSLPGR*TLRYRF
Trigger: AAATCTGTAACGGAGGGTGCATCTGCCCGGAAGACT...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR GCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAATTTGGGGGAGGTCTTaGTTGAGAAACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIIWGRS*LRNWSW
Trigger: CCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAAT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGATTTGGGGGAGGTCTTaGTTGAGAAACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRIWGRS*LRNWSW
Trigger: CCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAAT...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMWSSHS*ARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGAATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCCACAGGTGCTGCATTTaGGGCAGGTCGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSHRCCI*GRSLFR
Trigger: CCTGAACAGCGACCTGCCCCAAATGCAGCACCTGTG...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCGTTTGGTGCGCAAAGTaGGATCCACAGGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVVWCAK*DPQVLH
Trigger: ATGCAGCACCTGTGGATCCCACTTTGCGCACCAAAC...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTTGAGAAACTGGTCTTaGTACTGGCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYLRNWS*YWLGCR
Trigger: CCTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAA...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCTTGAGAAACTGGTCTTaGTACTGGCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVLRNWS*YWLGCR
Trigger: CCTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAA...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTCTTGCTTGAGAAACTaGTCTTGGTACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSCLRN*SWYWLG
Trigger: GCCCAGCCAGTACCAAGACCAGTTTCTCAAGCAAGA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCTTGCTTGAGAAACTaGTCTTGGTACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLSCLRN*SWYWLG
Trigger: GCCCAGCCAGTACCAAGACCAGTTTCTCAAGCAAGA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp TGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTACCTCAGCCTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: CPPYSLSADNISGHIYLSLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...GCTGAGGTAGATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSTIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TCAGTCTTGATAGTAGATCTTTTCTTAGCCATAATTTTGGCTTTGATTGCAGCAACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SVLIVDLFLAIILALIAATIPSL*PSKRAA
Trigger: GGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGT...TGCTGCAATCAAAGCCAAAATTATGGCTAAGAAAAGATCTACTATCAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGCGAGATCCTTTCTTCTaGTTTGGGGGAGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMRDPFF*FGGGLA
Trigger: AGCAAGACCTCCCCCAAATCAGAAGAAAGGATCTCG...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAAATATATCAACTGGTaGTCCATCAGGCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSKYINW*SIRQKP
Trigger: TGGCTTTTGCCTGATGGATCACCAGTTGATATATTT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: FRWKALTADPGRTTEGKCQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR GCA 90 bp CTCCGTTACAGATTTCAGTGTCATACCATGGTAGGTTCCCATAGTGTCAATTTTATTTGGGGGAGGTCTTaGTTGAGAAACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRYRFQCHTMVGSHSVNFIWGRS*LRNWSW
Trigger: CCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAAT...AAAATTGACACTATGGGAACCTACCATGGTATGACACTGAAATCTGTAACGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRITISFF*MLYCRR
Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATTGT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCTCTTGCTTGAGAAACTaGTCTTGGTACTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSSCLRN*SWYWLG
Trigger: GCCCAGCCAGTACCAAGACCAGTTTCTCAAGCAAGA...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CTCCGTTACAGATTTCAGTGTCATACCATGGTAGGTTCCCATAGTGTCAATTTTATACTCTCTCTCTGCTaGCAATATCTCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: LRYRFQCHTMVGSHSVNFILSLC*QYLGSH
Trigger: ATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTAT...AAAATTGACACTATGGGAACCTACCATGGTATGACACTGAAATCTGTAACGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR GCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCATTTGGGGGAGGTCTTaGTTGAGAAACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVIWGRS*LRNWSW
Trigger: CCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAAT...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCACCTTTGAACTGCCATaGAGGACCCTGCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSTFELP*RTLHKN
Trigger: GTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGT...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTTISFF*MLYCRR
Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATTGT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSWSSHS*ARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTACCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVMCSTL*VGLPFQ
Trigger: CTGGAAAGGAAGGCCAACCCAGAGAGTACTACACAT...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTCTGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTTGATAGTAGATCTTAATCTGTTTTCAGAGTaGTCTGCTCAGCCGGACGCA +
Preference number: 4 (lower is better)
Translates to: LCLRAVMSSSRSVLIVDLNLFSE*SAQPDA
Trigger: TGCGTCCGGCTGAGCAGACCACTCTGAAAACAGATT...AAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR TCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGATTGACGCTTCACCATTaGGATATCCAAGTAGATCTT +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRLTLHH*DIQVDL
Trigger: AAGATCTACTTGGATATCTCAATGGTGAAGCGTCAA...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR TCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGATACTCTCTCTCTGCTaGCAATATCTCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLILSLC*QYLGSH
Trigger: ATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTAT...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAAATATATCAACTGGTaGTCCATCAGGCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIKYINW*SIRQKP
Trigger: TGGCTTTTGCCTGATGGATCACCAGTTGATATATTT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTAAATATATCAACTGGTaGTCCATCAGGCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVKYINW*SIRQKP
Trigger: TGGCTTTTGCCTGATGGATCACCAGTTGATATATTT...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATAGGCAAATGGTCACTTaGTGTACCTTGGATGCAACA +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYRQMVT*CTLDAT
Trigger: TGTTGCATCCAAGGTACATCAAGTGACCATTTGCCT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGAGGCAAATGGTCACTTaGTGTACCTTGGATGCAACA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMRQMVT*CTLDAT
Trigger: TGTTGCATCCAAGGTACATCAAGTGACCATTTGCCT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAACAGATTCTGGTCCTTaGCTATTTCATCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRITDSGP*LFHHGE
Trigger: TTCTCCATGATGAAATAGTCAAGGACCAGAATCTGT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAGGGTTGAGAGCAACTaGTTGAAACCTACATATTTC +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIRVESN*LKPTYF
Trigger: GAAATATGTAGGTTTCAATCAGTTGCTCTCAACCCT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TCAGTCTTGATAGTAGATCTTTTCTTAGCCATAATTTTGGCTTTGATTGCAGCAAGTCTTCCGGGCAGATaGACCCTCCGTTACAGATTT +
Preference number: 4 (lower is better)
Translates to: SVLIVDLFLAIILALIAASLPGR*TLRYRF
Trigger: AAATCTGTAACGGAGGGTGCATCTGCCCGGAAGACT...TGCTGCAATCAAAGCCAAAATTATGGCTAAGAAAAGATCTACTATCAAGACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR GCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCGCAGTGCCCCCTGGTTaGATCTGGTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSAVPPG*IWSFLL
Trigger: AAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGC...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCTCAAGTGCGATTTATaGTTTACCATGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSLKCDL*FTMYLS
Trigger: GGACAGGTACATGGTAAAGCATAAATCGCACTTGAG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTACTCAAGTGCGATTTATaGTTTACCATGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLLKCDL*FTMYLS
Trigger: GGACAGGTACATGGTAAAGCATAAATCGCACTTGAG...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYTISFF*MLYCRR
Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATTGT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTCACATCCCTTTGCTTaGTTTTGGATGTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSHPFA*FWMFQR
Trigger: TCTCTGGAACATCCAAAACCAAGCAAAGGGATGTGA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAAAGGTTCAAGGCAAATaGTCACTTGATGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLKVQGK*SLDVPW
Trigger: CCAAGGTACATCAAGTGACCATTTGCCTTGAACCTT...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAAGGTTCAAGGCAAATaGTCACTTGATGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSKVQGK*SLDVPW
Trigger: CCAAGGTACATCAAGTGACCATTTGCCTTGAACCTT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTTGACGCTTCACCATTaGGATATCCAAGTAGATCTT +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSLTLHH*DIQVDL
Trigger: AAGATCTACTTGGATATCTCAATGGTGAAGCGTCAA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTGACGCTTCACCATTaGGATATCCAAGTAGATCTT +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLLTLHH*DIQVDL
Trigger: AAGATCTACTTGGATATCTCAATGGTGAAGCGTCAA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGGTTACATCCCATTTCTaGACATTTGGATCCAGACGA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMVTSHF*TFGSRR
Trigger: TCGTCTGGATCCAAATGTTCAGAAATGGGATGTAAC...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAGTAATTTAAAATGCTaGCTGTTCCCTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPSNLKC*LFPSEE
Trigger: CTCTTCAGAAGGGAACAGTCAGCATTTTAAATTACT...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR TCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAGGGTTGAGAGCAACTaGTTGAAACCTACATATTTC +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTRVESN*LKPTYF
Trigger: GAAATATGTAGGTTTCAATCAGTTGCTCTCAACCCT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCATTTGGGGGAGGTCTTaGTTGAGAAACTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSIWGRS*LRNWSW
Trigger: CCAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAAT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCTCAAGTGCGATTTATaGTTTACCATGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYLKCDL*FTMYLS
Trigger: GGACAGGTACATGGTAAAGCATAAATCGCACTTGAG...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp AAATTCTTTCCTGTGCTTTGTAAGATAGTTGTTCGTGTCCTCCATACTCTCTCTCTCAAGTGCGATTTATaGTTTACCATGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: KFFPVLCKIVVRVLHTLSLKCDL*FTMYLS
Trigger: GGACAGGTACATGGTAAAGCATAAATCGCACTTGAG...AGAGAGAGTATGGAGGACACGAACAACTATCTTACAAAGCACAGGAAAGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR GCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCTCAAGTGCGATTTATaGTTTACCATGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVLKCDL*FTMYLS
Trigger: GGACAGGTACATGGTAAAGCATAAATCGCACTTGAG...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTCTGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTTGATAGTAGATCTTACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLRAVMSSSRSVLIVDLTISFF*MLYCRR
Trigger: CCTGCGACAGTACAACATCCAGAAGAAGGAGATTGT...AAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAATTGCAGTGCCCCCTaGTTGCATCTGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSNCSAP*LHLVFS
Trigger: AGAAAAGACCAGATGCAACCAGGGGGCACTGCAATT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCATCAGGCAAAAGCCATaGCCAACCTTTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSIRQKP*PTFELP
Trigger: TGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGAT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCCCATTTCTGAACATTTaGATCCAGACGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTPFLNI*IQTNFI
Trigger: GATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGG...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGTCACATCCCTTTGCTTaGTTTTGGATGTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMSHPFA*FWMFQR
Trigger: TCTCTGGAACATCCAAAACCAAGCAAAGGGATGTGA...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGAGCAAATGTTTTCTTTaGTGCCTGGGAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: PISEHLDPDELHHTSDGRSKCFL*CLGVYQ
Trigger: TTGATAAACTCCCAGGCACCAAAGAAAACATTTGCT...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGTTTTCCTTTACAGGTTaGGCATACAAGGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMFSFTG*AYKGIS
Trigger: GGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAA...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTTTTCCTTTACAGGTTaGGCATACAAGGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLFSFTG*AYKGIS
Trigger: GGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAA...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR CCA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCATCATCATACTTCAGATaGAAGGCTTTAACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPSSYFR*KALTAD
Trigger: ATCTGCAGTTAAAGCCTTCCATCTGAAGTATGATGA...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR TCA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCTTGACGCTTCACCATTaGGATATCCAAGTAGATCTT +
Preference number: 4 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVLTLHH*DIQVDL
Trigger: AAGATCTACTTGGATATCTCAATGGTGAAGCGTCAA...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR TCA 90 bp AAATTCTTTCCTGTGCTTTGTAAGATAGTTGTTCGTGTCCTCCATACTCTCTCTTTGACGCTTCACCATTaGGATATCCAAGTAGATCTT +
Preference number: 4 (lower is better)
Translates to: KFFPVLCKIVVRVLHTLSLTLHH*DIQVDL
Trigger: AAGATCTACTTGGATATCTCAATGGTGAAGCGTCAA...AGAGAGAGTATGGAGGACACGAACAACTATCTTACAAAGCACAGGAAAGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR TCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCATACTCTCTCTCTGCTaGCAATATCTCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSILSLC*QYLGSH
Trigger: ATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTAT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCAGGTATCATCTCCTTaGAGCACAAAGCATCAAATA +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYQVSSP*STKHQI
Trigger: TATTTGATGCTTTGTGCTTCAAGGAGATGATACCTG...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAGTAATTTAAAATGCTaGCTGTTCCCTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSNLKC*LFPSEE
Trigger: CTCTTCAGAAGGGAACAGTCAGCATTTTAAATTACT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAGTAATTTAAAATGCTaGCTGTTCCCTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTSNLKC*LFPSEE
Trigger: CTCTTCAGAAGGGAACAGTCAGCATTTTAAATTACT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATACAGATTCTGGTCCTTaGCTATTTCATCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYTDSGP*LFHHGE
Trigger: TTCTCCATGATGAAATAGTCAAGGACCAGAATCTGT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGACAGATTCTGGTCCTTaGCTATTTCATCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMTDSGP*LFHHGE
Trigger: TTCTCCATGATGAAATAGTCAAGGACCAGAATCTGT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGGAAGGTAGTTCATACTaGCTTGTAGTAGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLEGSSY*LVVVLT
Trigger: TGTCAAGACTACTACAAGTCAGTATGAACTACCTTC...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATAATATTTTCAGTAGCTaGACGTCGGACATAAACAGG +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYNIFSS*TSDINR
Trigger: CCTGTTTATGTCCGACGTGCAGCTACTGAAAATATT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATATTGATGTACCTTGGATaGAACATTTTGTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: CARHCVKYCYIGPCHGRILMYLG*NILSEV
Trigger: TACTTCAGACAAAATGTTGCATCCAAGGTACATCAA...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGTTGATGTACCTTGGATaGAACATTTTGTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLLMYLG*NILSEV
Trigger: TACTTCAGACAAAATGTTGCATCCAAGGTACATCAA...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR GCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCATTCTGAATCCTTCCTaGACATTCAAATTACCTGGA +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTILNPS*TFKLPG
Trigger: TCCAGGTAATTTGAATGTGCAGGAAGGATTCAGAAT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSPKQHS*SSHSWA
Trigger: GGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGG...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGCCATTTCTGAACATTTaGATCCAGACGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMPFLNI*IQTNFI
Trigger: GATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGG...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCCCATTTCTGAACATTTaGATCCAGACGAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSPFLNI*IQTNFI
Trigger: GATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGG...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCCTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: LANISTGDPSGKSHGQPLKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGAAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAGCAAATGTTTTCTTTaGTGCCTGGGAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTSKCFL*CLGVYQ
Trigger: TTGATAAACTCCCAGGCACCAAAGAAAACATTTGCT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTCTCAGCATTCTATATaGACTTTAACCAGACAAACC +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTSQHSI*TLTRQT
Trigger: GGTTTGTCTGGTTAAAGTCCATATAGAATGCTGAGA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR TCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGATTAGAATAGCTGGGTaGATCTCAAACACAAGTGAA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMIRIAG*ISNTSE
Trigger: TTCACTTGTGTTTGAGATTCACCCAGCTATTCTAAT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTGATGTACCTTGGATaGAACATTTTGTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLLMYLG*NILSEV
Trigger: TACTTCAGACAAAATGTTGCATCCAAGGTACATCAA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCACTGTGTTAAGTACTaGTATATAGGACCATGTCAT +
Preference number: 4 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYHCVKY*YIGPCH
Trigger: ATGACATGGTCCTATATAGCAGTACTTAACACAGTG...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGATTCTGAATCCTTCCTaGACATTCAAATTACCTGGA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMILNPS*TFKLPG
Trigger: TCCAGGTAATTTGAATGTGCAGGAAGGATTCAGAAT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGGATCAACATACTTaGAAATGTGCCAACAAATAT +
Preference number: 4 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLWDQHT*KCANKY
Trigger: ATATTTGTTGGCACATTTGCAAGTATGTTGATCCCA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR CCA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGCTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCCTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CCA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTCATGGGAGAATAAATaGGAGTGGCTGAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTSWENK*EWLKIF
Trigger: AAAAATTTTCAGCCACTCCCATTTATTCTCCCATGA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGGTTAGCAGTAACTTATaGAGGGGTAAGTCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMVSSNL*RGKSSY
Trigger: ATAACTTGACTTACCCCTCCATAAGTTACTGCTAAC...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR CAA 72 bp AACAAAGTGAAATCAAGGTTCAAGGCAAATGGTCACTaGATGTACCTTGGATGCAACATTTTGTCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NKVKSRFKANGH*MYLGCNILSEV
Trigger: TACTTCAGACAAAATGTTGCATCCAAGGTACATCAAGTGACCATTTGCCTTGAACCTTGATTTCACTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCGAAGGTAGTTCATACTaGCTTGTAGTAGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSEGSSY*LVVVLT
Trigger: TGTCAAGACTACTACAAGTCAGTATGAACTACCTTC...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR TCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAGGGTTGAGAGCAACTaGTTGAAACCTACATATTTC +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSRVESN*LKPTYF
Trigger: GAAATATGTAGGTTTCAATCAGTTGCTCTCAACCCT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR GCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGAACAGATATAAACAATaGTGGGATCAACATACTTGC +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMNRYKQ*WDQHTC
Trigger: GCAAGTATGTTGATCCCAGCATTGTTTATATCTGTT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR CCA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGAATTGCATTTGTCAATaGGAATATAGGCCAATACCA +
Preference number: 4 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMNCICQ*EYRPIP
Trigger: TGGTATTGGCCTATATTCCCATTGACAAATGCAATT...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCCTCAATTTCCAGAAATaGAGGAGCCAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSLNFQK*RSQIIQ
Trigger: CTGAATTATTTGGCTCCTCCATTTCTGGAAATTGAG...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAGCAAATGTTTTCTTTaGTGCCTGGGAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSSKCFL*CLGVYQ
Trigger: TTGATAAACTCCCAGGCACCAAAGAAAACATTTGCT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCGTTAGCAGTAACTTATaGAGGGGTAAGTCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSVSSNL*RGKSSY
Trigger: ATAACTTGACTTACCCCTCCATAAGTTACTGCTAAC...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
3UTR CAA 72 bp TGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTaGATAGTAGATCTTTTCTTAGCCATAATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLRAVMSSSRSV*IVDLFLAIILA
Trigger: AGCCAAAATTATGGCTAAGAAAAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAAAAGTTTGCTTATATaGATGACAGGTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSKSLLI*MTGIIS
Trigger: GGAGATGATACCTGTCATCCATATAAGCAAACTTTT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CCA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTCATGGGAGAATAAATaGGAGTGGCTGAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSSWENK*EWLKIF
Trigger: AAAAATTTTCAGCCACTCCCATTTATTCTCCCATGA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTGCTGGGATAGGCTGTTaGGTGCGCAAAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFAGIGC*VRKVGS
Trigger: GGATCCCACTTTGCGCACCAAACAGCCTATCCCAGC...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGCCACAGGTGCTGCATTaGGGGCAGGTCGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTPQVLH*GQVAVQ
Trigger: CTGAACAGCGACCTGCCCCAAATGCAGCACCTGTGG...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GTTATAGGCAGCTGGGATAGGCTGTTTGGTGCGCAAAGTGGGATCCACAGGTGCGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: VIGSWDRLFGAQSGIHRCVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...GCACCTGTGGATCCCACTTTGCGCACCAAACAGCCTATCCCAGCTGCCTATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS CCA 90 bp TCCCCGAAGATCACTTCGTCTCCCTTCACCACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGGACGCTAAGCACGTCCGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SPKITSSPFTTISFF*MLYCRRTLSTSAIF
Trigger: GAAGATGGCGGACGTGCTTAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGAGATTGTGGTGAAGGGAGACGAAGTGATCTTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
ENST00000643784.1
ENST00000648071.1
ENST00000649606.1
ENST00000649895.1
ENST00000650197.1
CDS-3UTR CAA 90 bp AGTTGTTCGTGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCCCACAGGTGCTGCATTaGGGGCAGGTCGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SCSCPPYSLSADNISGHIPQVLH*GQVAVQ
Trigger: CTGAACAGCGACCTGCCCCAAATGCAGCACCTGTGG...GATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACACGAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGTCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTA +
Preference number: 5 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTSFFWM*YCRRTL
Trigger: TAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGCAAAAGCCATGGCCAACCTTTGAACTGCCATGCAGGACCCTGCACAAAAACGTGCAGCTCGTTTGACTaGAGTAGATCGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: GKSHGQPLNCHAGPCTKTCSSFD*SRSLKT
Trigger: GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCA...CGTTTTTGTGCAGGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTCCACAGGTGCTGCATTaGGGGCAGGTCGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSPQVLH*GQVAVQ
Trigger: CTGAACAGCGACCTGCCCCAAATGCAGCACCTGTGG...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CAA 90 bp AGTTGTTCGTGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCGCTGGGATAGGCTGTTaGGTGCGCAAAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: SCSCPPYSLSADNISGHIAGIGC*VRKVGS
Trigger: GGATCCCACTTTGCGCACCAAACAGCCTATCCCAGC...GATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACACGAACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFSHGQP*NCHAGP
Trigger: GGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCT...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS GCA 90 bp CTCTTATCTAAAGGAGGTAGCTCCTGCTCAGGTGGATGTGGCTGTTaGCATGTGAGACTACAGACCCAGTACGCAGTCATGCCAGATAGA +
Preference number: 5 (lower is better)
Translates to: LLSKGGSSCSGGCGC*HVRLQTQYAVMPDR
Trigger: TCTATCTGGCATGACTGCGTACTGGGTCTGTAGTCTCACATGGCAACAGCCACATCCACCTGAGCAGGAGCTACCTCCTTTAGATAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS CCA 90 bp CTTCCTTTCCAGTCCCCCAAACAACATAGTTGGTCTTCACATTCTTaGGCCAGGAGAACTCCCCGAAGATCACTTCGTCTCCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: LPFQSPKQHSWSSHS*ARRTPRRSLRLPSP
Trigger: TGGTGAAGGGAGACGAAGTGATCTTCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGGGGACTGGAAAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
ENST00000643784.1
ENST00000648071.1
ENST00000649606.1
ENST00000649895.1
ENST00000650197.1
CDS-3UTR CAA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTCTTGAGAAACTGGTCTaGGTACTGGCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFLEKLV*VLAGLQ
Trigger: CTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAAG...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSSHGQP*NCHAGP
Trigger: GGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS GCA 90 bp CTGTGGCAATCTAGAGAAAACCTCTTATCTAAAGGAGGTAGCTCCTaGTCAGGTGGATGTGGCTGTTGCCATGTGAGACTACAGACCCAG +
Preference number: 5 (lower is better)
Translates to: LWQSRENLLSKGGSS*SGGCGCCHVRLQTQ
Trigger: CTGGGTCTGTAGTCTCACATGGCAACAGCCACATCCACCTGAGCAGGAGCTACCTCCTTTAGATAAGAGGTTTTCTCTAGATTGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS-3UTR CAA 90 bp TGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTGGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: WGRSLFRCTPFFSGFYRLVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...CAATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp TGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTACCTCAGCCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: CPPYSLSADNISGHIYLSRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...GCTGAGGTAGATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp TGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTACCTCAGCTGCAGCTCGTTTGACTaGAGTAGATCGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: CPPYSLSADNISGHIYLSCSSFD*SRSLKT
Trigger: GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCA...GCTGAGGTAGATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp ATTTCTAAGGGAGCGCTTCTGTCTATACTTGCCGATGTTGACGCTTCACCATTGCTTGAGAAACTGGTCTaGGTACTGGCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ISKGALLSILADVDASPLLEKLV*VLAGLQ
Trigger: CTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAAG...CAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGTGTAATCCCAACACTTaGGGAGGTCGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PISEHLDPDELHHTSDGRCNPNT*GGRGGR
Trigger: CCGCCCGCCTCGACCTCCCAAAGTGTTGGGATTACA...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS TCA 90 bp TGGGCGACAGAGCCAGACTCCGTTTTTAGCAAATATATCAACTGGTaGTCCATCAGGCAAAAGCCATGGCCAACCTTTGAACTGCCATGC +
Preference number: 5 (lower is better)
Translates to: WATEPDSVFSKYINW*SIRQKPWPTFELPC
Trigger: GCATGGCAGTTCAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAAAAACGGAGTCTGGCTCTGTCGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS GCA 90 bp CTGCTCTGTCAGAGAGAGCATCTGTCAAGCCCACATTTAAACTGCTaGCTGCCTGTGCAGCAGCTGAGGAACCGTGGATTTCATATTATA +
Preference number: 5 (lower is better)
Translates to: LLCQREHLSSPHLNC*LPVQQLRNRGFHII
Trigger: TATAATATGAAATCCACGGTTCCTCAGCTGCTGCACAGGCAGGCAGCAGTTTAAATGTGGGCTTGACAGATGCTCTCTCTGACAGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649613.1
CDS GCA 90 bp ATTCTGCTCTGTCAGAGAGAGCATCTGTCAAGCCCACATTTAAACTaGTGCCTGCCTGTGCAGCAGCTGAGGAACCGTGGATTTCATATT +
Preference number: 5 (lower is better)
Translates to: ILLCQREHLSSPHLN*CLPVQQLRNRGFHI
Trigger: AATATGAAATCCACGGTTCCTCAGCTGCTGCACAGGCAGGCAGCAGTTTAAATGTGGGCTTGACAGATGCTCTCTCTGACAGAGCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649613.1
CDS-3UTR CAA 90 bp AGTTGTTCGTGTCCTCCATACTCTCTCTCTGCTGACAATATCTCGGGTCACATCTCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTA +
Preference number: 5 (lower is better)
Translates to: SCSCPPYSLSADNISGHISFFWM*YCRRTL
Trigger: TAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...GATGTGACCCGAGATATTGTCAGCAGAGAGAGAGTATGGAGGACACGAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GCTGCATTTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: AAFGAGRCSGARPSSLAFQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...AAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAAATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp CCCATTTCTGAACATTTGGATCCAGACGAACTTCATCATACTTCAGATGGAAGGGCTGGGATAGGCTGTTaGGTGCGCAAAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: PISEHLDPDELHHTSDGRAGIGC*VRKVGS
Trigger: GGATCCCACTTTGCGCACCAAACAGCCTATCCCAGC...CCTTCCATCTGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp ACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTACGCAGACACAGGTTTTTGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TADPGRTTEGKCTQTQVFDLGEV*LEKLVL
Trigger: CAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATC...AAAAACCTGTGTCTGCGTACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CAA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGAAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRSHGQP*NCHAGP
Trigger: GGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCT...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: LANISTGDPSGKSHGQPLSHGQP*NCHAGP
Trigger: GGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCT...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GTTATAGGCAGCTGGGATAGGCTGTTTGGTGCGCAAAGTGGGATCCACAGGTGCACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: VIGSWDRLFGAQSGIHRCTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...GCACCTGTGGATCCCACTTTGCGCACCAAACAGCCTATCCCAGCTGCCTATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGATTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRLVFTF*GQENSP
Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTTGCAGCTCGTTTGACTaGAGTAGATCGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSCSSFD*SRSLKT
Trigger: GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCA...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGCCACAGGTGCTGCATTaGGGGCAGGTCGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMPQVLH*GQVAVQ
Trigger: CTGAACAGCGACCTGCCCCAAATGCAGCACCTGTGG...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CAA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGCCACAGGTGCTGCATTaGGGGCAGGTCGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLPQVLH*GQVAVQ
Trigger: CTGAACAGCGACCTGCCCCAAATGCAGCACCTGTGG...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAGCCATGGCCAACCTTaGAACTGCCATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSHGQP*NCHAGP
Trigger: GGGTCCTGCATGGCAGTTCAAAGGTTGGCCATGGCT...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGCTGGGATAGGCTGTTaGGTGCGCAAAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYAGIGC*VRKVGS
Trigger: GGATCCCACTTTGCGCACCAAACAGCCTATCCCAGC...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367435.5
ENST00000643006.1
CDS-3UTR CAA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCGCTGGGATAGGCTGTTaGGTGCGCAAAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSAGIGC*VRKVGS
Trigger: GGATCCCACTTTGCGCACCAAACAGCCTATCCCAGC...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTACTTGAGAAACTGGTCTaGGTACTGGCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLLEKLV*VLAGLQ
Trigger: CTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAAG...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATATGGGGGAGGTCTTGCTaGAGAAACTGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIWGRSC*RNWSWY
Trigger: GTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCA...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGAAAATGTATCCTTTCTTCTGATTaGGGGGAGGTCTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: FRWKALTADPGRTTEGKCILSSD*GEVLLE
Trigger: CTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGAT...ACATTTTCCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CAA 90 bp TTGGGGCAGGTCGCTGTTCAGGTGCACGCCCTTCTTCTCTGGCTTTTACAGATTTGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: LGQVAVQVHALLLWLLQICKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...AATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACCTGAACAGCGACCTGCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYLVFTF*GQENSP
Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCTTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSLVFTF*GQENSP
Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGTAGTACTCTCTGGGTaGGCCTTCCTTTCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYVVLSG*AFLSSP
Trigger: GGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTAC...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTACCATGTACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCATGCAGCTCGTTTGACTaGAGTAGATCGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: LPCTCPMFPKTVRTLVYPCSSFD*SRSLKT
Trigger: GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCA...TGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGTACATGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGCTTGAGAAACTGGTCTaGGTACTGGCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMLEKLV*VLAGLQ
Trigger: CTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAAG...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTGGGGGAGGTCTTGCTaGAGAAACTGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTWGRSC*RNWSWY
Trigger: GTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIDLGEV*LEKLVL
Trigger: CAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATC...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ACACTAATTGCAGTGCCCCCTGGTTGCATCTGGTCTTTTCTTCTTTGTATTAGAGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TLIAVPPGCIWSFLLCIRDLGEV*LEKLVL
Trigger: CAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATC...TCTAATACAAAGAAGAAAAGACCAGATGCAACCAGGGGGCACTGCAATTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643006.1
ENST00000648071.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAAGGCAAATGGTCACTaGATGTACCTTGGATGCAAC +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSKANGH*MYLGCN
Trigger: GTTGCATCCAAGGTACATCAAGTGACCATTTGCCTT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTTCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTA +
Preference number: 5 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSSFFWM*YCRRTL
Trigger: TAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTA +
Preference number: 5 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLSFFWM*YCRRTL
Trigger: TAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTCTGTTTAAGGGCAGTTATGTCATCATCTAGATCAGTCTTGATAGTAGATCTTTTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: LCLRAVMSSSRSVLIVDLLVFTF*GQENSP
Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...AAGATCTACTATCAAGACTGATCTAGATGATGACATAACTGCCCTTAAACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643784.1
ENST00000648071.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAATTCTTTCCTGTGCTTTGTAAGATAGTTGTTCGTGTCCTCCATACTCTCTCTTGGGGGAGGTCTTGCTaGAGAAACTGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: KFFPVLCKIVVRVLHTLSWGRSC*RNWSWY
Trigger: GTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCA...AGAGAGAGTATGGAGGACACGAACAACTATCTTACAAAGCACAGGAAAGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTGGGGGAGGTCTTGCTaGAGAAACTGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLWGRSC*RNWSWY
Trigger: GTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCA...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAATCCTTTCTTCTGATTaGGGGGAGGTCTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIILSSD*GEVLLE
Trigger: CTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGAT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTCCCATTTCTGAACATTaGGATCCAGACGAACTTCAT +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSPISEH*DPDELH
Trigger: ATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATCATACTTCAGATGGAAGGCTTTAACTGCAGATCCTGGCCGAACGACAGAAGGACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: IILQMEGFNCRSWPNDRRTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...CCTTCTGTCGTTCGGCCAGGATCTGCAGTTAAAGCCTTCCATCTGAAGTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTAATAGTCACATCCCTTaGCTTGGTTTTGGATGTTCC +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSNSHIP*LGFGCS
Trigger: GGAACATCCAAAACCAAGCAAAGGGATGTGACTATT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTTGGTCTTCACATTCTaGGGCCAGGAGAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSLVFTF*GQENSP
Trigger: CGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCCTTGAGAAACTGGTCTaGGTACTGGCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSLEKLV*VLAGLQ
Trigger: CTGCAGCCCAGCCAGTACCAAGACCAGTTTCTCAAG...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYDLGEV*LEKLVL
Trigger: CAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATC...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGGATTTGGGGGAGGTCTaGCTTGAGAAACTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLDLGEV*LEKLVL
Trigger: CAAGACCAGTTTCTCAAGCAAGACCTCCCCCAAATC...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCATCCTTTCTTCTGATTaGGGGGAGGTCTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTILSSD*GEVLLE
Trigger: CTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGAT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAAGGCAAATGGTCACTaGATGTACCTTGGATGCAAC +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIKANGH*MYLGCN
Trigger: GTTGCATCCAAGGTACATCAAGTGACCATTTGCCTT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTCTGGGATCAACATACTaGCAAATGTGCCAACAAATA +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSLGSTY*QMCQQI
Trigger: TATTTGTTGGCACATTTGCAAGTATGTTGATCCCAG...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ACCTGTCCAATGTTTCCCAAAACCGTAAGAACACTGGTCTATCCAAATGACGTTGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: TCPMFPKTVRTLVYPNDVVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...AACGTCATTTGGATAGACCAGTGTTCTTACGGTTTTGGGAAACATTGGACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CAGCCAATCTCTCTTTATCAAGGCGCACACACTCTTCATCCTCAATTCGTGGTTCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: QPISLYQGAHTLHPQFVVQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...AACCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATAAAGAGAGATTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTGGGGGAGGTCTTGCTaGAGAAACTGGTCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSWGRSC*RNWSWY
Trigger: GTACCAAGACCAGTTTCTCAAGCAAGACCTCCCCCA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATATCCTTTCTTCTGATTaGGGGGAGGTCTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYILSSD*GEVLLE
Trigger: CTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGAT...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCATCCTTTCTTCTGATTaGGGGGAGGTCTTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVILSSD*GEVLLE
Trigger: CTCAAGCAAGACCTCCCCCAAATCAGAAGAAAGGAT...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp GGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATGGAGGGGTAAGTCAAGTTGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: GHTRVSPVSSNLWRGKSSCKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...ACTTGACTTACCCCTCCATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTAGCAAATATATCAACTGGTGATCCATCAGGCAAAAGCCATGGCCAACCTTTGTTTTTCCTTTACAGGTaGGGCATACAAGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: LANISTGDPSGKSHGQPLFFLYR*GIQGYL
Trigger: GAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA...CAAAGGTTGGCCATGGCTTTTGCCTGATGGATCACCAGTTGATATATTTGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS TCA 90 bp GGTTATCTAATCTTTGCTATCAGGCTCCGGGTAAGAGAATCCAGTTaGCTTCAGCCAAATTATCTTTCAAAGCTTTTGCAAAACCTCCCA +
Preference number: 5 (lower is better)
Translates to: GYLIFAIRLRVRESS*LQPNYLSKLLQNLP
Trigger: TGGGAGGTTTTGCAAAAGCTTTGAAAGATAATTTGGCTGAAGTCAACTGGATTCTCTTACCCGGAGCCTGATAGCAAAGATTAGATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTCCTTCTTCTGGATGTaGTACTGTCGCAGGACGCTA +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSSFFWM*YCRRTL
Trigger: TAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTAGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: LFPLQVGHTRVSPVSSNLVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...TAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTCCGTTACAGATTTCAGTGTCATACCATGGTAGGTTCCCATAGTGTCAATTTTGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: LRYRFQCHTMVGSHSVNFVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...AAAATTGACACTATGGGAACCTACCATGGTATGACACTGAAATCTGTAACGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCCGCTTCTGTCTATACTaGCCGATGTTGACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSRFCLY*PMLTLH
Trigger: GTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCG...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTGCAGCTCGTTTGACTaGAGTAGATCGCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSCSSFD*SRSLKT
Trigger: GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCCCATTTCTGAACATTaGGATCCAGACGAACTTCAT +
Preference number: 5 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSPISEH*DPDELH
Trigger: ATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TGTGCAAGGCACTGTGTTAAGTACTGCTATATAGGACCATGTCATGGGAGAATAAAGCAAATGTTTTCTTaGGTGCCTGGGAGTTTATCA +
Preference number: 5 (lower is better)
Translates to: CARHCVKYCYIGPCHGRIKQMFS*VPGSLS
Trigger: TGATAAACTCCCAGGCACCAAAGAAAACATTTGCTT...TATTCTCCCATGACATGGTCCTATATAGCAGTACTTAACACAGTGCCTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS GCA 90 bp ACTTATCTAGATCAATTTCTTTACATCCCCAGGTTATCTAATCTTTaGTATCAGGCTCCGGGTAAGAGAATCCAGTTGACTTCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: TYLDQFLYIPRLSNL*YQAPGKRIQLTSAK
Trigger: TTTGGCTGAAGTCAACTGGATTCTCTTACCCGGAGCCTGATAGCAAAGATTAGATAACCTGGGGATGTAAAGAAATTGATCTAGATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS-3UTR CAA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCCCATTTCTGAACATTaGGATCCAGACGAACTTCAT +
Preference number: 5 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVPISEH*DPDELH
Trigger: ATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCGTCACATCCCTTTGCTaGGTTTTGGATGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSVTSLC*VLDVPE
Trigger: CTCTGGAACATCCAAAACCAAGCAAAGGGATGTGAC...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCAAGCAAATGTTTTCTTaGGTGCCTGGGAGTTTATCA +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTKQMFS*VPGSLS
Trigger: TGATAAACTCCCAGGCACCAAAGAAAACATTTGCTT...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATTTTTTCCTTTACAGGTaGGGCATACAAGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYFFLYR*GIQGYL
Trigger: GAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATAGAACTTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: IELFPLQVGHTRVSPVSSQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...ACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAAGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp CTACTTATACCTCTCTTCATTCCCTGTAATTCTGTACTCTCAAACTCCAAGACCTGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: LLIPLFIPCNSVLSNSKTCKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...GGTCTTGGAGTTTGAGAGTACAGAATTACAGGGAATGAAGAGAGGTATAAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp ATGACCAGGTCTTGTCTCAAATTACATGAAAATGGGAATCAAGATTCAGGCATGTACAGATTCTGGTCCTaGACTATTTCATCATGGAGA +
Preference number: 5 (lower is better)
Translates to: MTRSCLKLHENGNQDSGMYRFWS*TISSWR
Trigger: TCTCCATGATGAAATAGTCAAGGACCAGAATCTGTA...CATGCCTGAATCTTGATTCCCATTTTCATGTAATTTGAGACAAGACCTGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp GAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCTACAGATTCTGGTCCTaGACTATTTCATCATGGAGA +
Preference number: 5 (lower is better)
Translates to: EPNNSESQVRFMLYHVPVYRFWS*TISSWR
Trigger: TCTCCATGATGAAATAGTCAAGGACCAGAATCTGTA...GACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCGTTGACGCTTCACCATaGAGATATCCAAGTAGATCT +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSVDASP*RYPSRS
Trigger: AGATCTACTTGGATATCTCAATGGTGAAGCGTCAAC...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp TTTTTCCTTTACAGGTTGGGCATACAAGGGTATCTCCAGTTAGCAGTAACTTATCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: FFLYRLGIQGYLQLAVTYQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...ATAAGTTACTGCTAACTGGAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTCCCAATTCGTGGTTTCTTaGCTTCTGCTAAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: SQIIQNLKCDLCFTMYLSQFVVS*LLLKLH
Trigger: ATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTG...GGACAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp TCAGTCTTGATAGTAGATCTTTTCTTAGCCATAATTTTGGCTTTGATTGCAGCACCCATTTCTGAACATTaGGATCCAGACGAACTTCAT +
Preference number: 5 (lower is better)
Translates to: SVLIVDLFLAIILALIAAPISEH*DPDELH
Trigger: ATGAAGTTCGTCTGGATCCAAATGTTCAGAAATGGG...TGCTGCAATCAAAGCCAAAATTATGGCTAAGAAAAGATCTACTATCAAGACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648071.1
CDS-3UTR CAA 90 bp AGGAGCCAAATAATTCAGAATCTCAAGTGCGATTTATGCTTTACCATGTACCTGTGTAAGCCAAAAAGTTaGCTTATATGGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: RSQIIQNLKCDLCFTMYLCKPKS*LIWMTG
Trigger: ACCTGTCATCCATATAAGCAAACTTTTTGGCTTACA...CAGGTACATGGTAAAGCATAAATCGCACTTGAGATTCTGAATTATTTGGCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643006.1
ENST00000648071.1
ENST00000650197.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCTTTTTCCTTTACAGGTaGGGCATACAAGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSFFLYR*GIQGYL
Trigger: GAGATACCCTTGTATGCCCAACCTGTAAAGGAAAAA...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCACAGGTATCATCTCCTaGAAGCACAAAGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSTGIIS*KHKASN
Trigger: ATTTGATGCTTTGTGCTTCAAGGAGATGATACCTGT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCAAGCAAATGTTTTCTTaGGTGCCTGGGAGTTTATCA +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSKQMFS*VPGSLS
Trigger: TGATAAACTCCCAGGCACCAAAGAAAACATTTGCTT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
CDS-3UTR CAA 90 bp AAAGAGAAAAGGAGCTTAAAGTTATACTGCAATAGGGCTGATACATATTCTTCCATAAGCAAACTGTATTaGTCTCATTCTACATGGCAG +
Preference number: 5 (lower is better)
Translates to: KEKRSLKLYCNRADTYSSISKLY*SHSTWQ
Trigger: CTGCCATGTAGAATGAGACAAATACAGTTTGCTTAT...GGAAGAATATGTATCAGCCCTATTGCAGTATAACTTTAAGCTCCTTTTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367435.5
CDS TCA 72 bp GGAGAATCACCTGAACCCAGGAGACGGATGTTGCACTaGGCTGAGATCACGCTACCGCACTCCAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GESPEPRRRMLH*AEITLPHSSLG
Trigger: ACCCAGGCTGGAGTGCGGTAGCGTGATCTCAGCTCAGTGCAACATCCGTCTCCTGGGTTCAGGTGATTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS CAA 72 bp CTCCAACCCGCCACCCCTACCTCCCGACTCCTGCAGTaGATTAAAGGCCACGTTCTGGGAGGCCTAAGTAAA +
Preference number: 6 (lower is better)
Translates to: LQPATPTSRLLQ*IKGHVLGGLSK
Trigger: TTTACTTAGGCCTCCCAGAACGTGGCCTTTAATCAACTGCAGGAGTCGGGAGGTAGGGGTGGCGGGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS TCA 72 bp GTAGCTCCTGCTCAGGTGGATGTGGCTGTTGCCATGTaGGACTACAGACCCAGTACGCAGTCATGCCAGATA +
Preference number: 6 (lower is better)
Translates to: VAPAQVDVAVAM*DYRPSTQSCQI
Trigger: TATCTGGCATGACTGCGTACTGGGTCTGTAGTCTCACATGGCAACAGCCACATCCACCTGAGCAGGAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS GCA 72 bp TGTCAGAGAGAGCATCTGTCAAGCCCACATTTAAACTaGTGCCTGCCTGTGCAGCAGCTGAGGAACCGTGGA +
Preference number: 6 (lower is better)
Translates to: CQREHLSSPHLN*CLPVQQLRNRG
Trigger: TCCACGGTTCCTCAGCTGCTGCACAGGCAGGCAGCAGTTTAAATGTGGGCTTGACAGATGCTCTCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649613.1
CDS GCA 72 bp AAAGGAGGTAGCTCCTGCTCAGGTGGATGTGGCTGTTaGCATGTGAGACTACAGACCCAGTACGCAGTCATG +
Preference number: 6 (lower is better)
Translates to: KGGSSCSGGCGC*HVRLQTQYAVM
Trigger: CATGACTGCGTACTGGGTCTGTAGTCTCACATGGCAACAGCCACATCCACCTGAGCAGGAGCTACCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS GCA 72 bp CAGAGAGAGCATCTGTCAAGCCCACATTTAAACTGCTaGCTGCCTGTGCAGCAGCTGAGGAACCGTGGATTT +
Preference number: 6 (lower is better)
Translates to: QREHLSSPHLNC*LPVQQLRNRGF
Trigger: AAATCCACGGTTCCTCAGCTGCTGCACAGGCAGGCAGCAGTTTAAATGTGGGCTTGACAGATGCTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649613.1
CDS CCA 72 bp GTTGGCCTTCCTTTCCAGTCCCCCAAACAACATAGTTaGTCTTCACATTCTTGGGCCAGGAGAACTCCCCGA +
Preference number: 6 (lower is better)
Translates to: VGLPFQSPKQHS*SSHSWARRTPR
Trigger: TCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAACTATGTTGTTTGGGGGACTGGAAAGGAAGGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
ENST00000643784.1
ENST00000648071.1
ENST00000649606.1
ENST00000649895.1
ENST00000650197.1
CDS CCA 72 bp ATCACTTCGTCTCCCTTCACCACAATCTCCTTCTTCTaGATGTTGTACTGTCGCAGGACGCTAAGCACGTCC +
Preference number: 6 (lower is better)
Translates to: ITSSPFTTISFF*MLYCRRTLSTS
Trigger: GGACGTGCTTAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGAGATTGTGGTGAAGGGAGACGAAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
ENST00000643784.1
ENST00000648071.1
ENST00000649606.1
ENST00000649895.1
ENST00000650197.1
CDS TCA 72 bp GGAGGATGCCGTAAAGAGTCACAGCAGCCGCAGCCCTaGCATGCCAGCATTTTTAGCAAATATATCAACTGG +
Preference number: 6 (lower is better)
Translates to: GGCRKESQQPQP*HASIFSKYINW
Trigger: CCAGTTGATATATTTGCTAAAAATGCTGGCATGTCAGGGCTGCGGCTGCTGTGACTCTTTACGGCATCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650197.1
CDS GCA 72 bp TCACGTGGGATTCAGCCAAGCAGTGACGTTAAATTCTaGTCTGTCAGAGAGAGCATCTGTCAAGCCCACATT +
Preference number: 6 (lower is better)
Translates to: SRGIQPSSDVKF*SVRESICQAHI
Trigger: AATGTGGGCTTGACAGATGCTCTCTCTGACAGAGCAGAATTTAACGTCACTGCTTGGCTGAATCCCACGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649613.1
CDS GCA 72 bp TCTAGAGAAAACCTCTTATCTAAAGGAGGTAGCTCCTaGTCAGGTGGATGTGGCTGTTGCCATGTGAGACTA +
Preference number: 6 (lower is better)
Translates to: SRENLLSKGGSS*SGGCGCCHVRL
Trigger: TAGTCTCACATGGCAACAGCCACATCCACCTGAGCAGGAGCTACCTCCTTTAGATAAGAGGTTTTCTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS CCA 72 bp GTAGAAATAAAATGGAATCCAATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAGTCCTTTCCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: VEIKWNPMCSTL*VGLPFQSFPLG
Trigger: GCCCAAAGGAAAGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTACACATTGGATTCCATTTTATTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482484.1
CDS TCA 72 bp AATCTAATCTGTTCAGTCTGTACAATCCCTTCTTTGTaGCCCTCCAAACGGGCAGCCAATCTCTCTTTATCA +
Preference number: 6 (lower is better)
Translates to: NLICSVCTIPSL*PSKRAANLSLS
Trigger: TGATAAAGAGAGATTGGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGTACAGACTGAACAGATTAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643784.1
CDS CCA 72 bp GTAGAAATAAAATGGAATCCAATGTGTAGTACTCTCTaGGTTGGCCTTCCTTTCCAGTCCCCCAAACAACAT +
Preference number: 6 (lower is better)
Translates to: VEIKWNPMCSTL*VGLPFQSPKQH
Trigger: ATGTTGTTTGGGGGACTGGAAAGGAAGGCCAACCCAGAGAGTACTACACATTGGATTCCATTTTATTTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000367435.5
ENST00000635846.1
ENST00000643006.1
ENST00000643784.1
ENST00000647662.1
ENST00000648071.1
ENST00000649606.1
ENST00000649895.1
ENST00000650197.1
CDS CAA 72 bp GACTCCTGCAACAAATCCCCCAATTTTAGGCTCTTGTaGCACAACGTACCTTTAACACTTGTCATAGTCACA +
Preference number: 6 (lower is better)
Translates to: DSCNKSPNFRLL*HNVPLTLVIVT
Trigger: TGTGACTATGACAAGTGTTAAAGGTACGTTGTGCAACAAGAGCCTAAAATTGGGGGATTTGTTGCAGGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649606.1
CDS GCA 72 bp GATCAATTTCTTTACATCCCCAGGTTATCTAATCTTTaGTATCAGGCTCCGGGTAAGAGAATCCAGTTGACT +
Preference number: 6 (lower is better)
Translates to: DQFLYIPRLSNL*YQAPGKRIQLT
Trigger: AGTCAACTGGATTCTCTTACCCGGAGCCTGATAGCAAAGATTAGATAACCTGGGGATGTAAAGAAATTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS CAA 90 bp AGGTTATCTAATCTTTGCTATCAGGCTCCGGGTAAGAGAATCCAGTaGACTTCAGCCAAATTATCTTTCAAAGCTTTTGCAAAACCTCCC +
Preference number: 6 (lower is better)
Translates to: RLSNLCYQAPGKRIQ*TSAKLSFKAFAKPP
Trigger: GGGAGGTTTTGCAAAAGCTTTGAAAGATAATTTGGCTGAAGTCAACTGGATTCTCTTACCCGGAGCCTGATAGCAAAGATTAGATAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649895.1
CDS TCA 72 bp ATCTTTGCTATCAGGCTCCGGGTAAGAGAATCCAGTTaGCTTCAGCCAAATTATCTTTCAAAGCTTTTGCAA +
Preference number: 6 (lower is better)
Translates to: IFAIRLRVRESS*LQPNYLSKLLQ
Trigger: TTGCAAAAGCTTTGAAAGATAATTTGGCTGAAGTCAACTGGATTCTCTTACCCGGAGCCTGATAGCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649895.1