RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42EP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163171

Ensembl transcript IDs: ENST00000295324.4, ENST00000422687.1, ENST00000453555.1, ENST00000457889.1, ENST00000494083.1, ENST00000611976.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTaGCCTCGTTTTAGCTGCCTTTATCTCGTCTATATGGCACTTTCT +
Preference number: 1 (lower is better)
Translates to: LRASLAPWGRVSALY*PRFSCLYLVYMALS
Trigger: AGAAAGTGCCATATAGACGAGATAAAGGCAGCTAAAACGAGGGCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 90 bp GAAGGAGTAGTTGGCAAAGGGACAGGAATCTGTGTGTACATTTCCTaGTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACC +
Preference number: 1 (lower is better)
Translates to: EGVVGKGTGICVYIS*SCFLNHHPQGISGT
Trigger: GGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGTACACACAGATTCCTGTCCCTTTGCCAACTACTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 90 bp CCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATaGTTTCTTTTCTGGTTACTGGGTCACAGGTGGCTCGCCATTTGC +
Preference number: 1 (lower is better)
Translates to: PCLPQQEVSLLIQMA*FLFWLLGHRWLAIC
Trigger: GCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 90 bp AAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATaGCATGGTTTCTTTTCTGGTTACTGGGTCACAGGTGGCTCGCCA +
Preference number: 1 (lower is better)
Translates to: KSLAYLNKKCLYLYK*HGFFSGYWVTGGSP
Trigger: TGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 90 bp CCTCGTTTTAGCTGCCTTTATCTCGTCTATATGGCACTTTCTGCGTaGAAAGACATTTGCCTTACAGGGATGAAACTGGACTTGCAAGAG +
Preference number: 1 (lower is better)
Translates to: PRFSCLYLVYMALSA*KDICLTGMKLDLQE
Trigger: CTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAGACGAGATAAAGGCAGCTAAAACGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 90 bp GTTGATGGTGGCTTATCATTTGGCATCTGGAAACTTCTCTTATTTTaGTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAAG +
Preference number: 1 (lower is better)
Translates to: VDGGLSFGIWKLLLF*WIWLSSGWLTDLPK
Trigger: CTTAGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCCAGATGCCAAATGATAAGCCACCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 90 bp GATAGAACTGCAAGAACCCCAAACCCAAAGAAAGAATCGTTGAAGTaGTTGGGAGAGGAGGTCATTTCTGAGATACATTTCCAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: DRTARTPNPKKESLK*LGEEVISEIHFQEK
Trigger: TTTCTCCTGGAAATGTATCTCAGAAATGACCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTGGGTTTGGGGTTCTTGCAGTTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 90 bp CTTATACAAATGGCATGGTTTCTTTTCTGGTTACTGGGTCACAGGTaGCTCGCCATTTGCTTTGAGTTTGCAAATAAAGTACATCTTGGG +
Preference number: 1 (lower is better)
Translates to: LIQMAWFLFWLLGHR*LAICFEFANKVHLG
Trigger: CCCAAGATGTACTTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 90 bp AAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGGTTACTaGGTCACAGGTGGCTCGCCATTTGCTTTGAGTTTGCAAATAAAG +
Preference number: 1 (lower is better)
Translates to: KCLYLYKWHGFFSGY*VTGGSPFALSLQIK
Trigger: CTTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 90 bp AAAGAACTCCCAGAAACTAAAATGGCTAACTGTAGGCAGGATGTGTaGTTAATATTTAGAATCTATCAAACCCAGTACTGGCAGGGCTGT +
Preference number: 1 (lower is better)
Translates to: KELPETKMANCRQDV*LIFRIYQTQYWQGC
Trigger: ACAGCCCTGCCAGTACTGGGTTTGATAGATTCTAAATATTAATCACACATCCTGCCTACAGTTAGCCATTTTAGTTTCTGGGAGTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 90 bp ATACCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTaGAGAAGCATCATGAGTAACCTGTGCCTTTACACTTTACAATCC +
Preference number: 1 (lower is better)
Translates to: IPIFPNNICGVAHSL*RSIMSNLCLYTLQS
Trigger: GGATTGTAAAGTGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 90 bp ATAGTGCACCATCAGAATAAAGCATGCAATATATTTACAGTCAGATaGAACAAGTGTGTCCATAAATCAACCAAAAGACCATCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: IVHHQNKACNIFTVR*NKCVHKSTKRPSPP
Trigger: AGGAGGAGATGGTCTTTTGGTTGATTTATGGACACACTTGTTTCATCTGACTGTAAATATATTGCATGCTTTATTCTGATGGTGCACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTGGAACTGTGAACTGTaGCGGGTGTGGTCCAACAGA +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERWNCEL*RVWSNR
Trigger: TCTGTTGGACCACACCCGTCACAGTTCACAGTTCCA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGACGGAAAGCACACAATaGCCTAGGGCAAGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERTESTQ*PRASLS
Trigger: GGACAAGCTTGCCCTAGGGCATTGTGTGCTTTCCGT...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTGCATCTCTGGCACCTTaGGGTCGGGTAAGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAASLAP*GRVSAL
Trigger: GAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGC...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCATGGCACTTTCTGCGTaGAAAGACATTTGCCTTACA +
Preference number: 2 (lower is better)
Translates to: TILRASLAPWGRVSALYCMALSA*KDICLT
Trigger: TGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCAT...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGACTCAGAAATGACCACTaGGAGGGTGGCATCAGTGCT +
Preference number: 2 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGLRNDH*EGGISA
Trigger: AGCACTGATGCCACCCTCTCAGTGGTCATTTCTGAG...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGATTGGGGTCGGGTAAGTaGTCTCTACTGCCCTCGTTT +
Preference number: 2 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGLGSGK*SLLPSF
Trigger: AAACGAGGGCAGTAGAGAGCACTTACCCGACCCCAA...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTTCTGCAGAAGCATCATaGGTAACCTGTGCCTTTACA +
Preference number: 2 (lower is better)
Translates to: TFPAPVSLTTILRASLAPSAEAS*VTCAFT
Trigger: TGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGA...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTCTCAGAAATGACCACTaGGAGGGTGGCATCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPLRNDH*EGGISA
Trigger: AGCACTGATGCCACCCTCTCAGTGGTCATTTCTGAG...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTTTTGCCTTACAGGGATaGAACTGGACTTGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: TFPAPVSLTTILRASLAPFALQG*NWTCKS
Trigger: ACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAA...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTCAAAGAAAGAATCGTTaGAGTGGTTGGGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAQRKNR*SGWERR
Trigger: CCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTG...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTAACCCAACACAAAACTaGAAATACAGCTCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: TFPAPVSLTTILRASLAPNPTQN*KYSSGS
Trigger: GCTTCCGGAGCTGTATTTGCAGTTTTGTGTTGGGTT...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTTCAAGTCAGGAAGATaGTCAGAAATGACCACTGAG +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERFKSGR*SEMTTE
Trigger: CTCAGTGGTCATTTCTGAGCATCTTCCTGACTTGAA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTGCCCTCGTTTTAGCTaGCTTTATCTCGTCTATATG +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERCPRFS*LYLVYM
Trigger: CATATAGACGAGATAAAGGCAGCTAAAACGAGGGCA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTGTGTGTACATTTCCTaGTCCTGTTTCCTTAACCAC +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERCVYIS*SCFLNH
Trigger: GTGGTTAAGGAAACAGGAGCAGGAAATGTACACACA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGCATCTCTGGCACCTTaGGGTCGGGTAAGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAASLAP*GRVSAL
Trigger: GAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGACAAAGAAAGAATCGTTaGAGTGGTTGGGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGQRKNR*SGWERR
Trigger: CCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTG...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 90 bp AACCAACCAGAAGGCTTCCCCGCTGGGTTGATGGTGGCTTATCATTaGGCATCTGGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTA +
Preference number: 2 (lower is better)
Translates to: NQPEGFPAGLMVAYH*ASGNFSYFAGYGCL
Trigger: TAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCCAGATGCCAAATGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTTTATCTCGTCTATATaGCACTTTCTGCGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERFISSI*HFLREK
Trigger: CTTTTCACGCAGAAAGTGCCATATAGACGAGATAAA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTAAAGAATCGTTGAAGTaGTTGGGAGAGGAGGTCATT +
Preference number: 2 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAKESLK*LGEEVI
Trigger: AATGACCTCCTCTCCCAACCACTTCAACGATTCTTT...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGAAGGGACCAGGCATTaGAAAGGCTGCCTCGGGAGA +
Preference number: 2 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSEGTRH*KGCLGR
Trigger: TCTCCCGAGGCAGCCTTTCCAATGCCTGGTCCCTTC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTTCTTTTCTGGTTACTaGGTCACAGGTGGCTCGCCA +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTFFSGY*VTGGSP
Trigger: TGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 90 bp CTGAATCTCATACAGCCAAACCAACCAGAAGGCTTCCCCGCTGGGTaGATGGTGGCTTATCATTTGGCATCTGGAAACTTCTCTTATTTT +
Preference number: 2 (lower is better)
Translates to: LNLIQPNQPEGFPAG*MVAYHLASGNFSYF
Trigger: AAAATAAGAGAAGTTTCCAGATGCCAAATGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCTGGTTGGTTTGGCTGTATGAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTCTGCCTCGGGAGAAGTaGCTCAACAAAATCATAAGC +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTLPREK*LNKIIS
Trigger: GCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAG...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTGTAGCCCACAGTCTCTaGAGAAGCATCATGAGTAAC +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTVAHSL*RSIMSN
Trigger: GTTACTCATGATGCTTCTGCAGAGACTGTGGGCTAC...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTGCATGGTTTCTTTTCTaGTTACTGGGTCACAGGTGG +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTAWFLF*LLGHRW
Trigger: CCACCTGTGACCCAGTAACCAGAAAAGAAACCATGC...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTCTGCAGAAGCATCATaGGTAACCTGTGCCTTTACA +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTSAEAS*VTCAFT
Trigger: TGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGGACTTGCAAGAGTTTaGTGTAGAAGGTGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPGLARV*CRRCSS
Trigger: ACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTTATCAAACCCAGTACTaGCAGGGCTGTTCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSYQTQY*QGCSLP
Trigger: GGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATA...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 90 bp CTGCCTTTATCTCGTCTATATGGCACTTTCTGCGTGAAAAGACATTaGCCTTACAGGGATGAAACTGGACTTGCAAGAGTTTGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: LPLSRLYGTFCVKRH*PYRDETGLARVCCR
Trigger: TCTACAGCAAACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAGACGAGATAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR TCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTAGAGGAGGTCATTTCTaGGATACATTTCCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTRGGHF*DTFPGE
Trigger: TTCTCCTGGAAATGTATCTCAGAAATGACCTCCTCT...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAGGTGGCTCGCCATTTaGTTTGAGTTTGCAAATAAA +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPRWLAI*FEFANK
Trigger: TTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGAAGTGTGTTTTACATGTaGCCCAAGAAAATTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGSVFYM*PKKILP
Trigger: TGGAAGAATTTTCTTGGGCCACATGTAAAACACACT...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 90 bp AATATAGAAGGACTAAACTGTGATTCTGGAGACCCGGGTTTCTCTTaGCTGTTCAACCAGTGTAGTCTTTTGTGTGTGCTGTTAACAGTG +
Preference number: 2 (lower is better)
Translates to: NIEGLNCDSGDPGFS*LFNQCSLLCVLLTV
Trigger: CACTGTTAACAGCACACACAAAAGACTACACTGGTTGAACAGCAAAGAGAAACCCGGGTCTCCAGAATCACAGTTTAGTCCTTCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTATCATGAGTAACCTGTaGCTTTACACTTTACAATCC +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPIMSNL*LYTLQS
Trigger: GGATTGTAAAGTGTAAAGGCACAGGTTACTCATGAT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGTGTGTACATTTCCTaGTCCTGTTTCCTTAACCAC +
Preference number: 2 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMACVYIS*SCFLNH
Trigger: GTGGTTAAGGAAACAGGAGCAGGAAATGTACACACA...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGTTAGTTGTCCTAATTaGATTTTACCTGCAGTCCAA +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPVSCPN*ILPAVQ
Trigger: TTGGACTGCAGGTAAAATGCAATTAGGACAACTAAC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATCCCAGAAACTAAAATaGCTAACTGTAGGCAGGATG +
Preference number: 2 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMASQKLK*LTVGRM
Trigger: CATCCTGCCTACAGTTAGCCATTTTAGTTTCTGGGA...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAAACCCAACACAAAACTaGAAATACAGCTCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVNPTQN*KYSSGS
Trigger: GCTTCCGGAGCTGTATTTGCAGTTTTGTGTTGGGTT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCACTATATGGCACTTTCTaGGTGAAAAGACATTTGCCT +
Preference number: 2 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMALYGTF*VKRHLP
Trigger: AGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAG...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTCTTGTTTCGTCTACTTaGTTAGTTGTCCTAATTGCA +
Preference number: 2 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTLVSST*LVVLIA
Trigger: TGCAATTAGGACAACTAACCAAGTAGACGAAACAAG...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTCTTATACAAATGGCATaGTTTCTTTTCTGGTTACTG +
Preference number: 2 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPLIQMA*FLFWLL
Trigger: CAGTAACCAGAAAAGAAACCATGCCATTTGTATAAG...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGGACTTGCAAGAGTTTaGTGTAGAAGGTGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSGLARV*CRRCSS
Trigger: ACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR GCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTTGCCCTCGTTTTAGCTaGCTTTATCTCGTCTATATG +
Preference number: 2 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSCPRFS*LYLVYM
Trigger: CATATAGACGAGATAAAGGCAGCTAAAACGAGGGCA...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 90 bp TTTTCTGGTTACTGGGTCACAGGTGGCTCGCCATTTGCTTTGAGTTaGCAAATAAAGTACATCTTGGGTTTCCTTATCTTTAAACAAGTA +
Preference number: 2 (lower is better)
Translates to: FSGYWVTGGSPFALS*QIKYILGFLIFKQV
Trigger: TACTTGTTTAAAGATAAGGAAACCCAAGATGTACTTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAGTGTGTTTTACATGTaGCCCAAGAAAATTCTTCCA +
Preference number: 2 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSSVFYM*PKKILP
Trigger: TGGAAGAATTTTCTTGGGCCACATGTAAAACACACT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp TCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTTaGGGTCGGGTAAGTGCTCTCTACTGCCCTCGTTTT +
Preference number: 3 (lower is better)
Translates to: SLTTILRASLAP*GRVSALYCPRF
Trigger: AAAACGAGGGCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCGGGATGAAACTGGACTaGCAAGAGTTTGCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: TILRASLAPWGRVSALYCGMKLD*QEFAVE
Trigger: TTCTACAGCAAACTCTTGCAAGTCCAGTTTCATCCC...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCCTAGGGCAAGCTaGTCCAACCTGTGGCCCGCA +
Preference number: 3 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTCPRAS*SNLWPA
Trigger: TGCGGGCCACAGGTTGGACAAGCTTGCCCTAGGGCA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 72 bp TACAGCCAAACCAACCAGAAGGCTTCCCCGCTGGGTTaGTGGTGGCTTATCATTTGGCATCTGGAAACTTCT +
Preference number: 3 (lower is better)
Translates to: YSQTNQKASPLG*WWLIIWHLETS
Trigger: AGAAGTTTCCAGATGCCAAATGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCTGGTTGGTTTGGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTGCGTGAAAAGACATTaGCCTTACAGGGATGAAACT +
Preference number: 3 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERCVKRH*PYRDET
Trigger: AGTTTCATCCCTGTAAGGCAAATGTCTTTTCACGCA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGGCATCTCTGGCACCTaGGGGTCGGGTAAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSGISGT*GSGKCS
Trigger: AGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGAATCGTTGAAGTGGTaGGGAGAGGAGGTCATTTCT +
Preference number: 3 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPESLKW*GEEVIS
Trigger: AGAAATGACCTCCTCTCCCAACCACTTCAACGATTC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 72 bp GAACTGCAAGAACCCCAAACCCAAAGAAAGAATCGTTaGAGTGGTTGGGAGAGGAGGTCATTTCTGAGATAC +
Preference number: 3 (lower is better)
Translates to: ELQEPQTQRKNR*SGWERRSFLRY
Trigger: GTATCTCAGAAATGACCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTGGGTTTGGGGTTCTTGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 72 bp GCCCACAGTCTCTGCAGAAGCATCATGAGTAACCTGTaGCTTTACACTTTACAATCCGTTATTGGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: AHSLCRSIMSNL*LYTLQSVIGCC
Trigger: ACAGCAACCAATAACGGATTGTAAAGTGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGAGACTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 72 bp TTGCCTTACAGGGATGAAACTGGACTTGCAAGAGTTTaGTGTAGAAGGTGTTCAAGTCAGGAAGATGCTCAG +
Preference number: 3 (lower is better)
Translates to: LPYRDETGLARV*CRRCSSQEDAQ
Trigger: CTGAGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTGGGATGAAACTGGACTaGCAAGAGTTTGCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTGMKLD*QEFAVE
Trigger: TTCTACAGCAAACTCTTGCAAGTCCAGTTTCATCCC...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAAGCCGCATGTAGCTTaGTTTCCTCTTTCTAATACG +
Preference number: 3 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPKPHVA*FPLSNT
Trigger: CGTATTAGAAAGAGGAAACAAAGCTACATGCGGCTT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 72 bp GGCTTATCATTTGGCATCTGGAAACTTCTCTTATTTTaGTGGATATGGCTGTCTAGTGGGTGGCTTACTGAC +
Preference number: 3 (lower is better)
Translates to: GLSFGIWKLLLF*WIWLSSGWLTD
Trigger: GTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCCAGATGCCAAATGATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp ACTGCCCTCGTTTTAGCTGCCTTTATCTCGTCTATATaGCACTTTCTGCGTGAAAAGACATTTGCCTTACAG +
Preference number: 3 (lower is better)
Translates to: TALVLAAFISSI*HFLREKTFALQ
Trigger: CTGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAGACGAGATAAAGGCAGCTAAAACGAGGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp GCAAGAACCCCAAACCCAAAGAAAGAATCGTTGAAGTaGTTGGGAGAGGAGGTCATTTCTGAGATACATTTC +
Preference number: 3 (lower is better)
Translates to: ARTPNPKKESLK*LGEEVISEIHF
Trigger: GAAATGTATCTCAGAAATGACCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTGGGTTTGGGGTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp CCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATaGTTTCTTTTCTGGTTACTGGGTCACAGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: PQQEVSLLIQMA*FLFWLLGHRWL
Trigger: GAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTAGGAGAAATACAAGTTaGAGAGAAGGAGCTGGTAGT +
Preference number: 3 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTRRNTS*REGAGS
Trigger: ACTACCAGCTCCTTCTCTCAAACTTGTATTTCTCCT...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR TCA 72 bp AAAAACACTGGAGAGTCATGGATAACGAAATACAACTaGGAAGTTACGGAAAGCACACAATGCCCTAGGGCA +
Preference number: 3 (lower is better)
Translates to: KNTGESWITKYN*EVTESTQCPRA
Trigger: TGCCCTAGGGCATTGTGTGCTTTCCGTAACTTCTCAGTTGTATTTCGTTATCCATGACTCTCCAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR GCA 72 bp TTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTaGAGAAGCATCATGAGTAACCTGTGCCTTTACACT +
Preference number: 3 (lower is better)
Translates to: FPNNICGVAHSL*RSIMSNLCLYT
Trigger: AGTGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp ATGGCATGGTTTCTTTTCTGGTTACTGGGTCACAGGTaGCTCGCCATTTGCTTTGAGTTTGCAAATAAAGTA +
Preference number: 3 (lower is better)
Translates to: MAWFLFWLLGHR*LAICFEFANKV
Trigger: TACTTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp TACTTATACAAATGGCATGGTTTCTTTTCTGGTTACTaGGTCACAGGTGGCTCGCCATTTGCTTTGAGTTTG +
Preference number: 3 (lower is better)
Translates to: YLYKWHGFFSGY*VTGGSPFALSL
Trigger: CAAACTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAAACCATGCCATTTGTATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CCA 72 bp TCATCAACTATGGTTAGTGTTAGTGTGTTTTACATGTaGCCCAAGAAAATTCTTCCAATGCGGTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: SSTMVSVSVFYM*PKKILPMRSRE
Trigger: TTCCCTGGACCGCATTGGAAGAATTTTCTTGGGCCACATGTAAAACACACTAACACTAACCATAGTTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR-3UTR CAA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTAGAGAAACCATCATGTaGGCTCATTCTATTGTGTTT +
Preference number: 3 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTRETIM*AHSIVF
Trigger: AAACACAATAGAATGAGCCAACATGATGGTTTCTCT...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCAAATTCAGGCCGCGGTaGCACCTGCGCCCGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCKFRPR*HLRPPV
Trigger: GACCGGCGGGCGCAGGTGCCACCGCGGCCTGAATTT...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCGGCGCACGCAATCCCTaGCGCTGTGCGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCGARNP*RCAQIQ
Trigger: CTGGATCTGCGCACAGCGGCAGGGATTGCGTGCGCC...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTGCGACGAGGCGCAAGTaGCGCAGCTGCCGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPATRRK*RSCRPE
Trigger: CTCGGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGC...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCAGTCTGCCGGCGTGGTaGCTGCTCACCGCATTATCC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCSLPAW*LLTALS
Trigger: GGATAATGCGGTGAGCAGGCACCACGCCGGCAGACT...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR TCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGGGGAGGGCGTTTCTGTaGACACAGAGTCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERGRAFL*TQSPRC
Trigger: GCACCTCGGACTCTGTGTTCACAGAAACGCCCTCCC...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGGAGATGCAGAACCGCTaGAGCCCCACGAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPEREMQNR*SPTRCL
Trigger: GAGACACCTCGTGGGGCTCCAGCGGTTCTGCATCTC...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCTATCAAACCCAGTACTaGCAGGGCTGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCYQTQY*QGCSLP
Trigger: GGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATA...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCCAAACCGGCCGCCGCTaGGGATCCCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIQTGRR*GSQPLP
Trigger: GGGCAGCGGCTGGGATCCTCAGCGGCGGCCGGTTTG...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
3UTR CAA 72 bp TTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTaGGGGTCGGGTAAGTGCTCTCTACTGCCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: FLNHHPQGISGT*GSGKCSLLPSF
Trigger: AAACGAGGGCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTACGCTCCGAGACGGCGTaGAGGCGCCCCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVRSETA*RRPRPV
Trigger: CACCGGCCTGGGGCGCCTTCACGCCGTCTCGGAGCG...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR TCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCTACATCATCCAGTCTTaGCCACAACCAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCYIIQS*PQPGQT
Trigger: GGTTTGTCCTGGTTGTGGTCAAGACTGGATGATGTA...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCACCCGGGTTTCTCTTTaGTGTTCAACCAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCTRVSL*CSTSVV
Trigger: GACTACACTGGTTGAACAGCAAAGAGAAACCCGGGT...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCGGCTTCGAAATGAGATaGGGTCAAAGAGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCGFEMR*GQREPS
Trigger: GGAAGGTTCTCTTTGACCCCATCTCATTTCGAAGCC...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGCTCCAAGCGGGGGACTaGTCATATCAGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERLQAGD*SYQETE
Trigger: TTCTGTCTCCTGATATGATCAGTCCCCCGCTTGGAG...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCTTTGCCTTACAGGGATaGAACTGGACTTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCFALQG*NWTCKS
Trigger: ACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAA...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTACAAGCCGGTGGCGGCTaGCCCAGACGCGCGACGAGG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVQAGGG*PRRATR
Trigger: CCTCGTCGCGCGTCTGGGGCAGCCGCCACCGGCTTG...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR TCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTCAAAGAGAACCTTCCTaGGGTTACGGCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPQREPS*GYGQVR
Trigger: CCTCACTTGGCCGTAACCTCAGGAAGGTTCTCTTTG...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCGAAAAGCTTGCTGGATaGAATAGTGCACCATCAGAA +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCEKLAG*NSAPSE
Trigger: TTCTGATGGTGCACTATTTCATCCAGCAAGCTTTTC...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCTTCAAGTCAGGAAGATaGTCAGAAATGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCFKSGR*SEMTTE
Trigger: CTCAGTGGTCATTTCTGAGCATCTTCCTGACTTGAA...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGAGAAGGGACCAGGCATTaGAAAGGCTGCCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGEGTRH*KGCLGR
Trigger: TCTCCCGAGGCAGCCTTTCCAATGCCTGGTCCCTTC...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGGGAGATGGCATTTTTaGGCACCGGGGAGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPGRWHF*APGRAF
Trigger: AAACGCCCTCCCCGGTGCTCAAAAATGCCATCTCCC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTCGTGCTGGCCCTCTTTaGCAATGTGGATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPRAGPL*QCGWCG
Trigger: GCCACACCATCCACATTGGCAAAGAGGGCCAGCACG...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGACGGAAGAACTCATTATaGCCAGGGAACTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGRKNSL*PGNWPR
Trigger: CCTGGGCCAGTTCCCTGGGCATAATGAGTTCTTCCG...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTCTAAAGTGCCTCTCTaGAGGAAAGAAAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERSKVPL*RKESHH
Trigger: GTGGTGGCTTTCTTTCCTGCAGAGAGGCACTTTAGA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCCCACATGATGCTTTTTaGAGCATTGTACCACAGAAT +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCPHDAF*SIVPQN
Trigger: ATTCTGTGGTACAATGCTGCAAAAAGCATCATGTGG...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTTTCTTTTCTGGTTACTaGGTCACAGGTGGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPFFSGY*VTGGSP
Trigger: TGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAA...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTTTGCCTTACAGGGATaGAACTGGACTTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERFALQG*NWTCKS
Trigger: ACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTTTCTCTTTGGAACTGTaGACTGTGACGGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAFSLEL*TVTGVV
Trigger: GACCACACCCGTCACAGTTCACAGTTCCAAAGAGAA...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTAGAAGGACTAAACTGTaGTTCTGGAGACCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPRRTKL*FWRPGF
Trigger: AAACCCGGGTCTCCAGAATCACAGTTTAGTCCTTCT...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGCTTCCCCGCTGGGTTaGTGGTGGCTTATCATTTGG +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPASPLG*WWLIIW
Trigger: CCAAATGATAAGCCACCATCAACCCAGCGGGGAAGC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCATCATGAGTAACCTGTaGCTTTACACTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: TILRASLAPWGRVSALYCIMSNL*LYTLQS
Trigger: GGATTGTAAAGTGTAAAGGCACAGGTTACTCATGAT...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTAAGTGGCTTCAGAAGTaGCTTCGAAATGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPKWLQK*LRNEMG
Trigger: CCCCATCTCATTTCGAAGCCACTTCTGAAGCCACTT...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTCTTTGCCAATGTGGATaGTGTGGCGAAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPLCQCG*CGESLQ
Trigger: TTGGAGACTTTCGCCACACCATCCACATTGGCAAAG...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGAGATGCAGAACCGCTaGAGCCCCACGAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAEMQNR*SPTRCL
Trigger: GAGACACCTCGTGGGGCTCCAGCGGTTCTGCATCTC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 72 bp ATACAGCCAAACCAACCAGAAGGCTTCCCCGCTGGGTaGATGGTGGCTTATCATTTGGCATCTGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: IQPNQPEGFPAG*MVAYHLASGNF
Trigger: GAAGTTTCCAGATGCCAAATGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCTGGTTGGTTTGGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTCTCCAAGCGGGGGACTaGTCATATCAGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPLQAGD*SYQETE
Trigger: TTCTGTCTCCTGATATGATCAGTCCCCCGCTTGGAG...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGGGAGATGGCATTTTTaGGCACCGGGGAGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAGRWHF*APGRAF
Trigger: AAACGCCCTCCCCGGTGCTCAAAAATGCCATCTCCC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTACAATAAGGGCAACATaGGAGCTTGGGATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVATIRAT*ELGILQ
Trigger: TTGGAGGATCCCAAGCTCTCATGTTGCCCTTATTGT...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTCTGCCTCGGGAGAAGTaGCTCAACAAAATCATAAGC +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVALPREK*LNKIIS
Trigger: GCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAG...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTATGCCGGCGTGGTGCCTaGTCACCGCATTATCCGCTC +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVCRRGA*SPHYPL
Trigger: GAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCA...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR GCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAGATCCAGCCGAGTCTaGCGGCGTGGTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSRSSRV*RRGACS
Trigger: TGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGGGACTTGCAAGAGTTTaGTGTAGAAGGTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERGLARV*CRRCSS
Trigger: ACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCC...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTACCGAGTCTGCCGGCGTaGTGCCTGCTCACCGCATTA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVPSLPA*CLLTAL
Trigger: TAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGG...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR CCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCGCATCTCTGGCACCTTaGGGTCGGGTAAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIASLAP*GRVSAL
Trigger: GAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGC...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGATACATCATCCAGTCTTaGCCACAACCAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGYIIQS*PQPGQT
Trigger: GGTTTGTCCTGGTTGTGGTCAAGACTGGATGATGTA...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAGGGAGGGCGTTTCTGTaGACACAGAGTCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVGRAFL*TQSPRC
Trigger: GCACCTCGGACTCTGTGTTCACAGAAACGCCCTCCC...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTCAATCCCTGCCGCTGTaGGCAGATCCAGCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSQSLPL*ADPAES
Trigger: AGACTCGGCTGGATCTGCGCACAGCGGCAGGGATTG...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS-3UTR GCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCACGGAAGAACTCATTATaGCCAGGGAACTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMARKNSL*PGNWPR
Trigger: CCTGGGCCAGTTCCCTGGGCATAATGAGTTCTTCCG...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGCTATATGGCACTTTCTaGGTGAAAAGACATTTGCCT +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERLYGTF*VKRHLP
Trigger: AGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAG...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTACGGAAAGCACACAATaGCCTAGGGCAAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDATESTQ*PRASLS
Trigger: GGACAAGCTTGCCCTAGGGCATTGTGTGCTTTCCGT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTCGCTCACAAGAGCCTTaGCTACCTCAACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPRSQEP*LPQQEV
Trigger: CACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGAGCG...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGCCACATGATGCTTTTTaGAGCATTGTACCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERPHDAF*SIVPQN
Trigger: ATTCTGTGGTACAATGCTGCAAAAAGCATCATGTGG...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTACGCAAGTGGCGCAGCTaGCGGCCCGAGAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVRKWRS*RPERVK
Trigger: TTTTACTCTCTCGGGCCGGCAGCTGCGCCACTTGCG...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR CCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCCCAATGTGGATGGTGTaGCGAAAGTCTCCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIPMWMV*RKSPSG
Trigger: CCCGCTTGGAGACTTTCGCCACACCATCCACATTGG...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCACCAATGTGGATGGTGTaGCGAAAGTCTCCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAPMWMV*RKSPSG
Trigger: CCCGCTTGGAGACTTTCGCCACACCATCCACATTGG...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCTCGCATGGGGTGGGATaGTCAAACATGTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSISHGVG*SNMSSA
Trigger: AGCCGAGGACATGTTTGACCATCCCACCCCATGCGA...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCGCATCTCTGGCACCTTaGGGTCGGGTAAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIASLAP*GRVSAL
Trigger: GAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGC...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTTATCAAACCCAGTACTaGCAGGGCTGTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAYQTQY*QGCSLP
Trigger: GGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATA...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTAGAAGGCTTCCCCGCTaGGTTGATGGTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDARRLPR*VDGGLS
Trigger: TGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAGAGGTTACGGCCAAGTaGGGCTTCCTAGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVEVTAK*GFLESQ
Trigger: CTGGCTCTCTAGGAAGCCTCACTTGGCCGTAACCTC...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGTAGCCCACAGTCTCTaGAGAAGCATCATGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPVAHSL*RSIMSN
Trigger: GTTACTCATGATGCTTCTGCAGAGACTGTGGGCTAC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCTTGGGGTCGGGTAAGTaGTCTCTACTGCCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSILGSGK*SLLPSF
Trigger: AAACGAGGGCAGTAGAGAGCACTTACCCGACCCCAA...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTCGCTCACAAGAGCCTTaGCTACCTCAACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTRSQEP*LPQQEV
Trigger: CACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGAGCG...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGCTTGTTTCGTCTACTTaGTTAGTTGTCCTAATTGCA +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERLVSST*LVVLIA
Trigger: TGCAATTAGGACAACTAACCAAGTAGACGAAACAAG...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGAGTGTGTTTTACATGTaGCCCAAGAAAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERSVFYM*PKKILP
Trigger: TGGAAGAATTTTCTTGGGCCACATGTAAAACACACT...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTTTACTGGGTCACAGGTaGCTCGCCATTTGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDALLGHR*LAICFE
Trigger: CTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAA...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTTTCTTTTCTGGTTACTaGGTCACAGGTGGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAFFSGY*VTGGSP
Trigger: TGGCGAGCCACCTGTGACCCAGTAACCAGAAAAGAA...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTCTTCTCTTATTTTGCTaGATATGGCTGTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVALLLFC*IWLSSG
Trigger: CCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCCAAAGAGAACCTTCCTaGGGTTACGGCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIQREPS*GYGQVR
Trigger: CCTCACTTGGCCGTAACCTCAGGAAGGTTCTCTTTG...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTGAAGTGGCTTCGAAATaGGATGGGGTCAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAEVASK*DGVKEN
Trigger: GTTCTCTTTGACCCCATCTCATTTCGAAGCCACTTC...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGCAAGTGTTTTTCTTTaGTGGGGAAGGAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPASVFL*WGRSSW
Trigger: CCAACTACTCCTTCCCCATCAAAGAAAAACACTTGC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTCAAAGAAAGAATCGTTaGAGTGGTTGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAQRKNR*SGWERR
Trigger: CCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTG...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTGGAACTGTGAACTGTaGCGGGTGTGGTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIWNCEL*RVWSNR
Trigger: TCTGTTGGACCACACCCGTCACAGTTCACAGTTCCA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTAGAAGGACTAAACTGTaGTTCTGGAGACCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDARRTKL*FWRPGF
Trigger: AAACCCGGGTCTCCAGAATCACAGTTTAGTCCTTCT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGCTTCCCCGCTGGGTTaGTGGTGGCTTATCATTTGG +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSASPLG*WWLIIW
Trigger: CCAAATGATAAGCCACCATCAACCCAGCGGGGAAGC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAACCCAACACAAAACTaGAAATACAGCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPNPTQN*KYSSGS
Trigger: GCTTCCGGAGCTGTATTTGCAGTTTTGTGTTGGGTT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTGTTAGTTGTCCTAATTaGATTTTACCTGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPVSCPN*ILPAVQ
Trigger: TTGGACTGCAGGTAAAATGCAATTAGGACAACTAAC...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTACCCGGGTTTCTCTTTaGTGTTCAACCAGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDATRVSL*CSTSVV
Trigger: GACTACACTGGTTGAACAGCAAAGAGAAACCCGGGT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTGGCTTCGAAATGAGATaGGGTCAAAGAGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTGFEMR*GQREPS
Trigger: GGAAGGTTCTCTTTGACCCCATCTCATTTCGAAGCC...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGCTTATACAAATGGCATaGTTTCTTTTCTGGTTACTG +
Preference number: 4 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERLIQMA*FLFWLL
Trigger: CAGTAACCAGAAAAGAAACCATGCCATTTGTATAAG...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGACTTCTCTTATTTTGCTaGATATGGCTGTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGLLLFC*IWLSSG
Trigger: CCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCAGAAGGCTTCCCCGCTaGGTTGATGGTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIRRLPR*VDGGLS
Trigger: TGATAAGCCACCATCAACCCAGCGGGGAAGCCTTCT...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTGCAAGTGTTTTTCTTTaGTGGGGAAGGAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTASVFL*WGRSSW
Trigger: CCAACTACTCCTTCCCCATCAAAGAAAAACACTTGC...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCCAAAGAAAGAATCGTTaGAGTGGTTGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIQRKNR*SGWERR
Trigger: CCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTG...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTTCTCTTTGGAACTGTaGACTGTGACGGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIFSLEL*TVTGVV
Trigger: GACCACACCCGTCACAGTTCACAGTTCCAAAGAGAA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCACTGCCTCGGGAGAAGTaGCTCAACAAAATCATAAGC +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMALPREK*LNKIIS
Trigger: GCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAG...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCGTATTCTGGCCTTCCTaGATCTCATACAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIVFWPS*ISYSQT
Trigger: GGTTTGGCTGTATGAGATTCAGGAAGGCCAGAATAC...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGTAGCCCACAGTCTCTaGAGAAGCATCATGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAVAHSL*RSIMSN
Trigger: GTTACTCATGATGCTTCTGCAGAGACTGTGGGCTAC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTGTTAGTTGTCCTAATTaGATTTTACCTGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAVSCPN*ILPAVQ
Trigger: TTGGACTGCAGGTAAAATGCAATTAGGACAACTAAC...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAACGGAAAGCACACAATaGCCTAGGGCAAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVTESTQ*PRASLS
Trigger: GGACAAGCTTGCCCTAGGGCATTGTGTGCTTTCCGT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCTCTAAAGTGCCTCTCTaGAGGAAAGAAAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSISKVPL*RKESHH
Trigger: GTGGTGGCTTTCTTTCCTGCAGAGAGGCACTTTAGA...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGAAGGTGGCTCGCCATTTaGTTTGAGTTTGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGRWLAI*FEFANK
Trigger: TTTATTTGCAAACTCAAAGCAAATGGCGAGCCACCT...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCAAGTGGCTTCAGAAGTaGCTTCGAAATGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIKWLQK*LRNEMG
Trigger: CCCCATCTCATTTCGAAGCCACTTCTGAAGCCACTT...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTTCCCAGAAACTAAAATaGCTAACTGTAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPSQKLK*LTVGRM
Trigger: CATCCTGCCTACAGTTAGCCATTTTAGTTTCTGGGA...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTCTTATACAAATGGCATaGTTTCTTTTCTGGTTACTG +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPLIQMA*FLFWLL
Trigger: CAGTAACCAGAAAAGAAACCATGCCATTTGTATAAG...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTCTCTACTTATACAAATaGCATGGTTTCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TFPAPVSLTTILRASLAPLYLYK*HGFFSG
Trigger: ACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAG...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTGGCTGTCTAGTGGGTaGCTTACTGACTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIWLSSG*LTDLPK
Trigger: CTTAGGCAAGTCAGTAAGCCACCCACTAGACAGCCA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 72 bp AGAACCCCAAACCCAAAGAAAGAATCGTTGAAGTGGTaGGGAGAGGAGGTCATTTCTGAGATACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RTPNPKKESLKW*GEEVISEIHFQ
Trigger: CTGGAAATGTATCTCAGAAATGACCTCCTCTCCCAACCACTTCAACGATTCTTTCTTTGGGTTTGGGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTAGAGGAGGTCATTTCTaGGATACATTTCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDARGGHF*DTFPGE
Trigger: TTCTCCTGGAAATGTATCTCAGAAATGACCTCCTCT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCGTATTCTGGCCTTCCTaGATCTCATACAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIVFWPS*ISYSQT
Trigger: GGTTTGGCTGTATGAGATTCAGGAAGGCCAGAATAC...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTCCCATTCTTCCACATaGTGCTTTTTGCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTSHSST*CFLQHC
Trigger: ACAATGCTGCAAAAAGCATCATGTGGAAGAATGGGA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGAATCATGAGTAACCTGTaGCTTTACACTTTACAATCC +
Preference number: 4 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGIMSNL*LYTLQS
Trigger: GGATTGTAAAGTGTAAAGGCACAGGTTACTCATGAT...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTTTCAAGTCAGGAAGATaGTCAGAAATGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAFKSGR*SEMTTE
Trigger: CTCAGTGGTCATTTCTGAGCATCTTCCTGACTTGAA...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGTGTGTACATTTCCTaGTCCTGTTTCCTTAACCAC +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTCVYIS*SCFLNH
Trigger: GTGGTTAAGGAAACAGGAGCAGGAAATGTACACACA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATCTTTCAAAAGGATTTaGCTAAAGCTGGGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMASFKRI*LKLGQA
Trigger: GGCTTGCCCCAGCTTTAGGCAAATCCTTTTGAAAGA...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTATTACTGGGTCACAGGTaGCTCGCCATTTGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVLLGHR*LAICFE
Trigger: CTCAAAGCAAATGGCGAGCCACCTGTGACCCAGTAA...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTCTCTACTTATACAAATaGCATGGTTTCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GKAASGEVTQQNHKPHVALYLYK*HGFFSG
Trigger: ACCAGAAAAGAAACCATGCCATTTGTATAAGTAGAG...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTATGGCTGTCTAGTGGGTaGCTTACTGACTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVWLSSG*LTDLPK
Trigger: CTTAGGCAAGTCAGTAAGCCACCCACTAGACAGCCA...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
3UTR CAA 72 bp TCTCGTCTATATGGCACTTTCTGCGTGAAAAGACATTaGCCTTACAGGGATGAAACTGGACTTGCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SRLYGTFCVKRH*PYRDETGLARV
Trigger: AACTCTTGCAAGTCCAGTTTCATCCCTGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAGACGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAGAAGTGGCTTCGAAATaGGATGGGGTCAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVEVASK*DGVKEN
Trigger: GTTCTCTTTGACCCCATCTCATTTCGAAGCCACTTC...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAACAATAAGGGCAACATaGGAGCTTGGGATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVTIRAT*ELGILQ
Trigger: TTGGAGGATCCCAAGCTCTCATGTTGCCCTTATTGT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTATAACGAAATACAACTaGGAAGTTACGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPITKYN*EVTEST
Trigger: TGTGCTTTCCGTAACTTCTCAGTTGTATTTCGTTAT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCGGACTTGCAAGAGTTTaGTGTAGAAGGTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIGLARV*CRRCSS
Trigger: ACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCC...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTCTTTGCCAATGTGGATaGTGTGGCGAAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSLCQCG*CGESLQ
Trigger: TTGGAGACTTTCGCCACACCATCCACATTGGCAAAG...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAAAAGAATCGTTGAAGTaGTTGGGAGAGGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAKESLK*LGEEVI
Trigger: AATGACCTCCTCTCCCAACCACTTCAACGATTCTTT...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAGCATGGTTTCTTTTCTaGTTACTGGGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVAWFLF*LLGHRW
Trigger: CCACCTGTGACCCAGTAACCAGAAAAGAAACCATGC...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGGTGGCTTATCATTTaGCATCTGGAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTWWLII*HLETSL
Trigger: AAGAGAAGTTTCCAGATGCCAAATGATAAGCCACCA...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTTCTGCAGAAGCATCATaGGTAACCTGTGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSSAEAS*VTCAFT
Trigger: TGTAAAGGCACAGGTTACTCATGATGCTTCTGCAGA...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCGTTTCATCTTTACCTTaGGGTCACGCTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIVSSLP*GHATDE
Trigger: TTCATCTGTAGCGTGACCTCAAGGTAAAGATGAAAC...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTCCCATTCTTCCACATaGTGCTTTTTGCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNISHSST*CFLQHC
Trigger: ACAATGCTGCAAAAAGCATCATGTGGAAGAATGGGA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAACCCAACACAAAACTaGAAATACAGCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSNPTQN*KYSSGS
Trigger: GCTTCCGGAGCTGTATTTGCAGTTTTGTGTTGGGTT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCCTATATGGCACTTTCTaGGTGAAAAGACATTTGCCT +
Preference number: 4 (lower is better)
Translates to: PIFPNNICGVAHSLCRSILYGTF*VKRHLP
Trigger: AGGCAAATGTCTTTTCACGCAGAAAGTGCCATATAG...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAAACTTCTCTTATTTTaGTGGATATGGCTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPKLLLF*WIWLSS
Trigger: ACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGAGAAACCATCATGTTaGCTCATTCTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPEKPSC*LILLCL
Trigger: TAAACACAATAGAATGAGCCAACATGATGGTTTCTC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTTATTTTGCTGGATATaGCTGTCTAGTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNILFCWI*LSSGWL
Trigger: AAGCCACCCACTAGACAGCCATATCCAGCAAAATAA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAATGGCACTTTCTGCGTaGAAAGACATTTGCCTTACA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVMALSA*KDICLT
Trigger: TGTAAGGCAAATGTCTTTTCACGCAGAAAGTGCCAT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAAGAGGAGGTCATTTCTaGGATACATTTCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVRGGHF*DTFPGE
Trigger: TTCTCCTGGAAATGTATCTCAGAAATGACCTCCTCT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGTTTCATCTTTACCTTaGGGTCACGCTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSVSSLP*GHATDE
Trigger: TTCATCTGTAGCGTGACCTCAAGGTAAAGATGAAAC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTATGCCCTCGTTTTAGCTaGCTTTATCTCGTCTATATG +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVCPRFS*LYLVYM
Trigger: CATATAGACGAGATAAAGGCAGCTAAAACGAGGGCA...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATTTATCTCGTCTATATaGCACTTTCTGCGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAFISSI*HFLREK
Trigger: CTTTTCACGCAGAAAGTGCCATATAGACGAGATAAA...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAAAGAATCGTTGAAGTaGTTGGGAGAGGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSKESLK*LGEEVI
Trigger: AATGACCTCCTCTCCCAACCACTTCAACGATTCTTT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCACTTGTTTCGTCTACTTaGTTAGTTGTCCTAATTGCA +
Preference number: 4 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMALVSST*LVVLIA
Trigger: TGCAATTAGGACAACTAACCAAGTAGACGAAACAAG...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTTTATTTTGCTGGATATaGCTGTCTAGTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSLFCWI*LSSGWL
Trigger: AAGCCACCCACTAGACAGCCATATCCAGCAAAATAA...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTGGTGGCTTATCATTTaGCATCTGGAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIWWLII*HLETSL
Trigger: AAGAGAAGTTTCCAGATGCCAAATGATAAGCCACCA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR TCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAATAACGAAATACAACTaGGAAGTTACGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVITKYN*EVTEST
Trigger: TGTGCTTTCCGTAACTTCTCAGTTGTATTTCGTTAT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR GCA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAAAACTTCTCTTATTTTaGTGGATATGGCTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVKLLLF*WIWLSS
Trigger: ACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTT...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CCA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGAGAAACCATCATGTTaGCTCATTCTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSEKPSC*LILLCL
Trigger: TAAACACAATAGAATGAGCCAACATGATGGTTTCTC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS GCA 90 bp GGTGGCGGCTGCCCCAGACGCGCGACGAGGCGCAAGTGGCGCAGCTaGCGGCCCGAGAGAGTAAAATTCAGGCCGCGGTGGCACCTGCGC +
Preference number: 5 (lower is better)
Translates to: GGGCPRRATRRKWRS*RPERVKFRPRWHLR
Trigger: GCGCAGGTGCCACCGCGGCCTGAATTTTACTCTCTCGGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCAGCCGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS CCA 90 bp GGGCAAGCCGGTGGCGGCTGCCCCAGACGCGCGACGAGGCGCAAGTaGCGCAGCTGCCGGCCCGAGAGAGTAAAATTCAGGCCGCGGTGG +
Preference number: 5 (lower is better)
Translates to: GQAGGGCPRRATRRK*RSCRPERVKFRPRW
Trigger: CCACCGCGGCCTGAATTTTACTCTCTCGGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCAGCCGCCACCGGCTTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 90 bp CCTGCCGCTGTGCGCAGATCCAGCCGAGTCTGCCGGCGTGGTGCCTaGTCACCGCATTATCCGCTCCGAGACGGCGTGAAGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PAAVRRSSRVCRRGA*SPHYPLRDGVKAPQ
Trigger: CTGGGGCGCCTTCACGCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 90 bp CGGGCGCACGCAATCCCTGCCGCTGTGCGCAGATCCAGCCGAGTCTaGCGGCGTGGTGCCTGCTCACCGCATTATCCGCTCCGAGACGGC +
Preference number: 5 (lower is better)
Translates to: RAHAIPAAVRRSSRV*RRGACSPHYPLRDG
Trigger: GCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGGGATTGCGTGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 90 bp AATCCCTGCCGCTGTGCGCAGATCCAGCCGAGTCTGCCGGCGTGGTaGCTGCTCACCGCATTATCCGCTCCGAGACGGCGTGAAGGCGCC +
Preference number: 5 (lower is better)
Translates to: NPCRCAQIQPSLPAW*LLTALSAPRRREGA
Trigger: GGCGCCTTCACGCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGGGATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS CCA 90 bp CGCAATCCCTGCCGCTGTGCGCAGATCCAGCCGAGTCTGCCGGCGTaGTGCCTGCTCACCGCATTATCCGCTCCGAGACGGCGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RNPCRCAQIQPSLPA*CLLTALSAPRRREG
Trigger: GCCTTCACGCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGGGATTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 90 bp TCTTTCAAAAGGATTTGCCTAAAGCTGGGGCAAGCCGGTGGCGGCTaGCCCAGACGCGCGACGAGGCGCAAGTGGCGCAGCTGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: SFKRICLKLGQAGGG*PRRATRRKWRSCRP
Trigger: GGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCAGCCGCCACCGGCTTGCCCCAGCTTTAGGCAAATCCTTTTGAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 90 bp TGCAGGCTCTCACATTACTCGTTTCTGCAGCTCCCAAGAAGGGCATaGCATGTCACAGGGGTCCACACGGGGAAGCACCAGGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CRLSHYSFLQLPRRA*HVTGVHTGKHQGWS
Trigger: TGACCAACCCTGGTGCTTCCCCGTGTGGACCCCTGTGACATGGCATGCCCTTCTTGGGAGCTGCAGAAACGAGTAATGTGAGAGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS-3UTR CAA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTTGCCCTAGGGCAAGCTaGTCCAACCTGTGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GKAASGEVTQQNHKPHVACPRAS*SNLWPA
Trigger: TGCGGGCCACAGGTTGGACAAGCTTGCCCTAGGGCA...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCTCGCTCACAAGAGCCTaGCCTACCTCAACAAGAAGT +
Preference number: 5 (lower is better)
Translates to: TILRASLAPWGRVSALYCSLTRA*PTSTRS
Trigger: ACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGAGCGA...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACCATCCTCAGGGCATCTCTGGCACCTTGGGGTCGGGTAAGTGCTCTCTACTGCGACCCGGGTTTCTCTTaGCTGTTCAACCAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: TILRASLAPWGRVSALYCDPGFS*LFNQCS
Trigger: ACTACACTGGTTGAACAGCAAAGAGAAACCCGGGTC...GCAGTAGAGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCCCTGAGGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS CCA 90 bp CAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTaGAAGGGGAAGCAAACACGTCCTTCTTCACACGGTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QFSMAGEASGNLQSW*KGKQTRPSSHGGSK
Trigger: CTTGCTGCCACCGTGTGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453555.1
ENST00000494083.1
CDS CCA 90 bp TCACAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGTGGAAGGGGAAGCAAACACGTCCTTCTTCACACGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SQFSMAGEASGNLQS*WKGKQTRPSSHGGS
Trigger: GCTGCCACCGTGTGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 90 bp AAACAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGTGGAAGGGGAAGCAAACACGTCCTTCTTCACACGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KQFSMAGEASGNLQS*WKGKQTRPSSHGGS
Trigger: GCTGCCACCGTGTGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS-3UTR CAA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGATCGTGCTGGCCCTCTTaGCCAATGTGGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGSCWPS*PMWMVW
Trigger: CCACACCATCCACATTGGCAAAGAGGGCCAGCACGA...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTGGCTTCCCCGCTGGGTaGATGGTGGCTTATCATTTG +
Preference number: 5 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAGFPAG*MVAYHL
Trigger: CAAATGATAAGCCACCATCAACCCAGCGGGGAAGCC...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTGGCATCTCTGGCACCTaGGGGTCGGGTAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAGISGT*GSGKCS
Trigger: AGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCC...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGTTACATCATCCAGTCTaGACCACAACCAGGACAAAC +
Preference number: 5 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERLHHPV*TTTRTN
Trigger: GTTTGTCCTGGTTGTGGTCAAGACTGGATGATGTAA...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GGAAACTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTAGGGAGATGGCATTTTaGAGCACCGGGGAGGGCGTT +
Preference number: 5 (lower is better)
Translates to: GNFSYFAGYGCLVGGLLTREMAF*STGEGV
Trigger: AACGCCCTCCCCGGTGCTCAAAAATGCCATCTCCCT...AGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGGCATCTCTGGCACCTaGGGGTCGGGTAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAGISGT*GSGKCS
Trigger: AGAGCACTTACCCGACCCCAAGGTGCCAGAGATGCC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS TCA 90 bp TTCAGAAGTGGCTTCGAAATGAGATGGGGTCAAAGAGAACCTTCCTaGGGTTACGGCCAAGTGAGGCTTCCTAGAGAGCCAGTTACATCA +
Preference number: 5 (lower is better)
Translates to: FRSGFEMRWGQREPS*GYGQVRLPREPVTS
Trigger: TGATGTAACTGGCTCTCTAGGAAGCCTCACTTGGCCGTAACCTCAGGAAGGTTCTCTTTGACCCCATCTCATTTCGAAGCCACTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295324.4
ENST00000422687.1
ENST00000453555.1
ENST00000457889.1
ENST00000611976.1
CDS GCA 90 bp TACTTTATGAAGATTACAATTGCAGGCTCTCACATTACTCGTTTCTaGAGCTCCCAAGAAGGGCATGCCATGTCACAGGGGTCCACACGG +
Preference number: 5 (lower is better)
Translates to: YFMKITIAGSHITRF*SSQEGHAMSQGSTR
Trigger: CCGTGTGGACCCCTGTGACATGGCATGCCCTTCTTGGGAGCTGCAGAAACGAGTAATGTGAGAGCCTGCAATTGTAATCTTCATAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CCA 90 bp TGTGCTATGCCTTGTGGCTTCCTTCCAGAGTATAATATAAAAATGTaGGGAGGTGCAGTGGGGGAGAAGGGCTGTAATCCTAGCGCTTGT +
Preference number: 5 (lower is better)
Translates to: CAMPCGFLPEYNIKM*GGAVGEKGCNPSAC
Trigger: ACAAGCGCTAGGATTACAGCCCTTCTCCCCCACTGCACCTCCCCACATTTTTATATTATACTCTGGAAGGAAGCCACAAGGCATAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS-3UTR CAA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGGATATAGCTTGTCTTTaGTTAGGTCTCACTAGGGGA +
Preference number: 5 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERDIACL*LGLTRG
Trigger: TCCCCTAGTGAGACCTAACAAAAGACAAGCTATATC...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGATGGTGGCTTATCATTaGGCATCTGGAAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERMVAYH*ASGNFS
Trigger: AGAGAAGTTTCCAGATGCCAAATGATAAGCCACCAT...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTGTCTTTCAAAAGGATTaGCCTAAAGCTGGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: GKAASGEVTQQNHKPHVAVFQKD*PKAGAS
Trigger: GCTTGCCCCAGCTTTAGGCAAATCCTTTTGAAAGAC...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS-3UTR CAA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTCGTGCTGGCCCTCTTaGCCAATGTGGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TRTYTAYNGIPMEISDNISCWPS*PMWMVW
Trigger: CCACACCATCCACATTGGCAAAGAGGGCCAGCACGA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCAGGGAGATGGCATTTTaGAGCACCGGGGAGGGCGTT +
Preference number: 5 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIREMAF*STGEGV
Trigger: AACGCCCTCCCCGGTGCTCAAAAATGCCATCTCCCT...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGGCTTCCCCGCTGGGTaGATGGTGGCTTATCATTTG +
Preference number: 5 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAGFPAG*MVAYHL
Trigger: CAAATGATAAGCCACCATCAACCCAGCGGGGAAGCC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CTATCAAACCCAGTACTGGCAGGGCTGTTCTCTCCCCAGTACTTACCAGAGAGGGTTTCTGAATCCTTTTaGATAGGAACTGTCACATCA +
Preference number: 5 (lower is better)
Translates to: LSNPVLAGLFSPQYLPERVSESF*IGTVTS
Trigger: TGATGTGACAGTTCCTATCAAAAAGGATTCAGAAAC...CCTCTCTGGTAAGTACTGGGGAGAGAACAGCCCTGCCAGTACTGGGTTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GGAAAGGCTGCCTCGGGAGAAGTGACTCAACAAAATCATAAGCCGCATGTAGCTAACCAGTGTAGTCTTTaGTGTGTGCTGTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: GKAASGEVTQQNHKPHVANQCSL*CVLLTV
Trigger: CACTGTTAACAGCACACACAAAAGACTACACTGGTT...AGCTACATGCGGCTTATGATTTTGTTGAGTCACTTCTCCCGAGGCAGCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACATTTCCTGCTCCTGTTTCCTTAACCACCATCCTCAGGGCATCTCTGGCACCTGTTTCTGAATCCTTTTaGATAGGAACTGTCACATCA +
Preference number: 5 (lower is better)
Translates to: TFPAPVSLTTILRASLAPVSESF*IGTVTS
Trigger: TGATGTGACAGTTCCTATCAAAAAGGATTCAGAAAC...AGGTGCCAGAGATGCCCTGAGGATGGTGGTTAAGGAAACAGGAGCAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTGGGATGAAACTGGACTaGCAAGAGTTTGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPGMKLD*QEFAVE
Trigger: TTCTACAGCAAACTCTTGCAAGTCCAGTTTCATCCC...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGACCCGGGTTTCTCTTaGCTGTTCAACCAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMADPGFS*LFNQCS
Trigger: ACTACACTGGTTGAACAGCAAAGAGAAACCCGGGTC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTATTCCAGGACTTCATTaGCGGGGAGCCTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAIPGLH*RGAFRK
Trigger: TTTTCTGAAGGCTCCCCGCAAATGAAGTCCTGGAAT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp AGAACATCAATTCAGCTCACAGCAGGTATGGGTCTAAAGTGCCTCTCTGCAGGATCTCAGATGAAAAGCTaGCTGGATGAAATAGTGCAC +
Preference number: 5 (lower is better)
Translates to: RTSIQLTAGMGLKCLSAGSQMKS*LDEIVH
Trigger: GTGCACTATTTCATCCAGCAAGCTTTTCATCTGAGA...TCCTGCAGAGAGGCACTTTAGACCCATACCTGCTGTGAGCTGAATTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS CCA 90 bp CACCACTTGGGGAAAGGAATCCTTATGTTAGATAGGAGGCCACAATaGACACAAAGAAGTACTCACAGCAAACTAAGCACAGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HHLGKGILMLDRRPQ*TQRSTHSKLSTELS
Trigger: AGAAAGCTCTGTGCTTAGTTTGCTGTGAGTACTTCTTTGTGTCCATTGTGGCCTCCTATCTAACATAAGGATTCCTTTCCCCAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CCA 90 bp GAAGTACTCTACAGGAGACTGGAATTGAACAATGAAATAAACGAATaGCTGATGGCAGAAGCCAGGTTCTTCATTGTAGGAGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: EVLYRRLELNNEINE*LMAEARFFIVGGRG
Trigger: TCCTCTCCCTCCTACAATGAAGAACCTGGCTTCTGCCATCAGCCATTCGTTTATTTCATTGTTCAATTCCAGTCTCCTGTAGAGTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS-3UTR CAA 90 bp CTTCTCTTATTTTGCTGGATATGGCTGTCTAGTGGGTGGCTTACTGACTTGCCTAGGAGAAATACAAGTTaGAGAGAAGGAGCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: LLLFCWIWLSSGWLTDLPRRNTS*REGAGS
Trigger: ACTACCAGCTCCTTCTCTCAAACTTGTATTTCTCCT...AGGCAAGTCAGTAAGCCACCCACTAGACAGCCATATCCAGCAAAATAAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAGAATCGTTGAAGTGGTaGGGAGAGGAGGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAESLKW*GEEVIS
Trigger: AGAAATGACCTCCTCTCCCAACCACTTCAACGATTC...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp TCACAAGAGCCTTGCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCAATTCCAGGACTTCATTaGCGGGGAGCCTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SQEPCLPQQEVSLLIQMAIPGLH*RGAFRK
Trigger: TTTTCTGAAGGCTCCCCGCAAATGAAGTCCTGGAAT...TGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGCAAGGCTCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTAAGCCGCATGTAGCTTaGTTTCCTCTTTCTAATACG +
Preference number: 5 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAKPHVA*FPLSNT
Trigger: CGTATTAGAAAGAGGAAACAAAGCTACATGCGGCTT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS GCA 90 bp AGGGAGAGGAAACAAGCAAGGGGGAGAAGGTTAGAATTATCTATGTaGTACTGGGTTGGGATTGGAGACATCAGTATCAACTCATATTTA +
Preference number: 5 (lower is better)
Translates to: RERKQARGRRLELSM*YWVGIGDISINSYL
Trigger: TAAATATGAGTTGATACTGATGTCTCCAATCCCAACCCAGTAGCACATAGATAATTCTAACCTTCTCCCCCTTGCTTGTTTCCTCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 90 bp CCTAGAAGCAATAACACCTTTGCAACAAGGAGCATGTCCAGGTCTTaGTTTCTAATACATTCTCCAATAAAAGAACCAAGCTCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PRSNNTFATRSMSRS*FLIHSPIKEPSSLE
Trigger: CTCCAAGGAGCTTGGTTCTTTTATTGGAGAATGTATTAGAAACCAAGACCTGGACATGCTCCTTGTTGCAAAGGTGTTATTGCTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS-3UTR CAA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCTGCGTGAAAAGACATTaGCCTTACAGGGATGAAACT +
Preference number: 5 (lower is better)
Translates to: PIFPNNICGVAHSLCRSICVKRH*PYRDET
Trigger: AGTTTCATCCCTGTAAGGCAAATGTCTTTTCACGCA...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp AGAGGCTCAGTTTCTAGCCTCTCAAACCATAAGGAAGTAATCAAAATGAGAGTAGAATCGTTGAAGTGGTaGGGAGAGGAGGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: RGSVSSLSNHKEVIKMRVESLKW*GEEVIS
Trigger: AGAAATGACCTCCTCTCCCAACCACTTCAACGATTC...TACTCTCATTTTGATTACTTCCTTATGGTTTGAGAGGCTAGAAACTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCACTTGTTTCGTCTACTaGGTTAGTTGTCCTAATTGC +
Preference number: 5 (lower is better)
Translates to: PIFPNNICGVAHSLCRSITCFVY*VSCPNC
Trigger: GCAATTAGGACAACTAACCAAGTAGACGAAACAAGT...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCAACCAGTGTAGTCTTTaGTGTGTGCTGTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: TRTYTAYNGIPMEISDNINQCSL*CVLLTV
Trigger: CACTGTTAACAGCACACACAAAAGACTACACTGGTT...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCTCTCAGATGAAAAGCTaGCTGGATGAAATAGTGCAC +
Preference number: 5 (lower is better)
Translates to: TRTYTAYNGIPMEISDNISQMKS*LDEIVH
Trigger: GTGCACTATTTCATCCAGCAAGCTTTTCATCTGAGA...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GAAACTGGACTTGCAAGAGTTTGCTGTAGAAGGTGTTCAAGTCAGGAAGATGCTATGCTTTTTGCAGCATaGTACCACAGAATAATGACT +
Preference number: 5 (lower is better)
Translates to: ETGLARVCCRRCSSQEDAMLFAA*YHRIMT
Trigger: AGTCATTATTCTGTGGTACAATGCTGCAAAAAGCAT...AGCATCTTCCTGACTTGAACACCTTCTACAGCAAACTCTTGCAAGTCCAGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS CCA 90 bp AACCTATGGGATCACATGAGGCCATTTATTTGTCAATTATATCTTTaGTTGAGGCTGTCATCATATCTCACCTGGTTCCTTTACACCTTC +
Preference number: 5 (lower is better)
Translates to: NLWDHMRPFICQLYL*LRLSSYLTWFLYTF
Trigger: GAAGGTGTAAAGGAACCAGGTGAGATATGATGACAGCCTCAACCAAAGATATAATTGACAAATAAATGGCCTCATGTGATCCCATAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS-3UTR CAA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAGGAGAAATACAAGTTaGAGAGAAGGAGCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSRRNTS*REGAGS
Trigger: ACTACCAGCTCCTTCTCTCAAACTTGTATTTCTCCT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTAAGCCGCATGTAGCTTaGTTTCCTCTTTCTAATACG +
Preference number: 5 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSKPHVA*FPLSNT
Trigger: CGTATTAGAAAGAGGAAACAAAGCTACATGCGGCTT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTGATATAGCTTGTCTTTaGTTAGGTCTCACTAGGGGA +
Preference number: 5 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSDIACL*LGLTRG
Trigger: TCCCCTAGTGAGACCTAACAAAAGACAAGCTATATC...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp GCCTACCTCAACAAGAAGTGTCTCTACTTATACAAATGGCATGGTTTCTTTTCTATGGTGGCTTATCATTaGGCATCTGGAAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: AYLNKKCLYLYKWHGFFSMVAYH*ASGNFS
Trigger: AGAGAAGTTTCCAGATGCCAAATGATAAGCCACCAT...AGAAAAGAAACCATGCCATTTGTATAAGTAGAGACACTTCTTGTTGAGGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS-3UTR CAA 90 bp CCTATATTTCCAAATAACATATGTGGTGTAGCCCACAGTCTCTGCAGAAGCATCATGCTTTTTGCAGCATaGTACCACAGAATAATGACT +
Preference number: 5 (lower is better)
Translates to: PIFPNNICGVAHSLCRSIMLFAA*YHRIMT
Trigger: AGTCATTATTCTGTGGTACAATGCTGCAAAAAGCAT...GATGCTTCTGCAGAGACTGTGGGCTACACCACATATGTTATTTGGAAATATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS TCA 90 bp CTTAACAATTATGGAAGTACTCTACAGGAGACTGGAATTGAACAATaGAATAAACGAATGGCTGATGGCAGAAGCCAGGTTCTTCATTGT +
Preference number: 5 (lower is better)
Translates to: LNNYGSTLQETGIEQ*NKRMADGRSQVLHC
Trigger: ACAATGAAGAACCTGGCTTCTGCCATCAGCCATTCGTTTATTTCATTGTTCAATTCCAGTCTCCTGTAGAGTACTTCCATAATTGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS-3UTR CAA 90 bp ACACGCACATACACAGCTTACAATGGAATCCCAATGGAAATAAGTGACAACATCAGAGAAACCATCATGTaGGCTCATTCTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TRTYTAYNGIPMEISDNIRETIM*AHSIVF
Trigger: AAACACAATAGAATGAGCCAACATGATGGTTTCTCT...GATGTTGTCACTTATTTCCATTGGGATTCCATTGTAAGCTGTGTATGTGCGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295324.4
ENST00000611976.1
CDS CCA 90 bp TTCCATTTAAGTAATATCCTGGAAAAGGCAAAACTCTTATGGAGATaGCAAATAGACCAGTGGTTTCAGAAACTCTTGGTGAAAGGAATT +
Preference number: 5 (lower is better)
Translates to: FHLSNILEKAKLLWR*QIDQWFQKLLVKGI
Trigger: AATTCCTTTCACCAAGAGTTTCTGAAACCACTGGTCTATTTGCCATCTCCATAAGAGTTTTGCCTTTTCCAGGATATTACTTAAATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp TCCGCTCCGAGACGGCGTGAAGGCGCCCCAGGCCGGTaGCCGGGTCTCCGGGCTAGCCCCGCGCTGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SAPRRREGAPGR*PGLRASPALRS
Trigger: GGACCGCAGCGCGGGGCTAGCCCGGAGACCCGGCCACCGGCCTGGGGCGCCTTCACGCCGTCTCGGAGCGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 72 bp CGGGCCTCCCGCGGGCGCACGCAATCCCTGCCGCTGTaGGCAGATCCAGCCGAGTCTGCCGGCGTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: RASRGRTQSLPL*ADPAESAGVVP
Trigger: AGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGGGATTGCGTGCGCCCGCGGGAGGCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS CCA 72 bp AGCTGCCGGCCCGAGAGAGTAAAATTCAGGCCGCGGTaGCACCTGCGCCCGCCGGTCACCCGGCCACCGCCA +
Preference number: 6 (lower is better)
Translates to: SCRPERVKFRPR*HLRPPVTRPPP
Trigger: TGGCGGTGGCCGGGTGACCGGCGGGCGCAGGTGCCACCGCGGCCTGAATTTTACTCTCTCGGGCCGGCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 72 bp TGCCCCAGACGCGCGACGAGGCGCAAGTGGCGCAGCTaGCGGCCCGAGAGAGTAAAATTCAGGCCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: CPRRATRRKWRS*RPERVKFRPRW
Trigger: CCACCGCGGCCTGAATTTTACTCTCTCGGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 72 bp AGGATTTGCCTAAAGCTGGGGCAAGCCGGTGGCGGCTaGCCCAGACGCGCGACGAGGCGCAAGTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RICLKLGQAGGG*PRRATRRKWRS
Trigger: GCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCAGCCGCCACCGGCTTGCCCCAGCTTTAGGCAAATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS CCA 72 bp GGTGGCGGCTGCCCCAGACGCGCGACGAGGCGCAAGTaGCGCAGCTGCCGGCCCGAGAGAGTAAAATTCAGG +
Preference number: 6 (lower is better)
Translates to: GGGCPRRATRRK*RSCRPERVKFR
Trigger: CCTGAATTTTACTCTCTCGGGCCGGCAGCTGCGCCACTTGCGCCTCGTCGCGCGTCTGGGGCAGCCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 72 bp CGCTGTGCGCAGATCCAGCCGAGTCTGCCGGCGTGGTaGCTGCTCACCGCATTATCCGCTCCGAGACGGCGT +
Preference number: 6 (lower is better)
Translates to: RCAQIQPSLPAW*LLTALSAPRRR
Trigger: ACGCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS CCA 72 bp TGCCGCTGTGCGCAGATCCAGCCGAGTCTGCCGGCGTaGTGCCTGCTCACCGCATTATCCGCTCCGAGACGG +
Preference number: 6 (lower is better)
Translates to: CRCAQIQPSLPA*CLLTALSAPRR
Trigger: CCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 72 bp GTGCGCAGATCCAGCCGAGTCTGCCGGCGTGGTGCCTaGTCACCGCATTATCCGCTCCGAGACGGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: VRRSSRVCRRGA*SPHYPLRDGVK
Trigger: CTTCACGCCGTCTCGGAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 72 bp GCAATCCCTGCCGCTGTGCGCAGATCCAGCCGAGTCTaGCGGCGTGGTGCCTGCTCACCGCATTATCCGCTC +
Preference number: 6 (lower is better)
Translates to: AIPAAVRRSSRV*RRGACSPHYPL
Trigger: GAGCGGATAATGCGGTGAGCAGGCACCACGCCGGCAGACTCGGCTGGATCTGCGCACAGCGGCAGGGATTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295324.4
CDS GCA 72 bp GGCGTTTCTTCTCCCTCAGGGTCTTTCAAAAGGATTTaGCTAAAGCTGGGGCAAGCCGGTGGCGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GVSSPSGSFKRI*LKLGQAGGGCP
Trigger: GGGGCAGCCGCCACCGGCTTGCCCCAGCTTTAGGCAAATCCTTTTGAAAGACCCTGAGGGAGAAGAAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611976.1
CDS GCA 72 bp TCACATTACTCGTTTCTGCAGCTCCCAAGAAGGGCATaGCATGTCACAGGGGTCCACACGGGGAAGCACCAG +
Preference number: 6 (lower is better)
Translates to: SHYSFLQLPRRA*HVTGVHTGKHQ
Trigger: CTGGTGCTTCCCCGTGTGGACCCCTGTGACATGGCATGCCCTTCTTGGGAGCTGCAGAAACGAGTAATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS TCA 72 bp GGGGTCAAAGAGAACCTTCCTGAGGTTACGGCCAAGTaGGGCTTCCTAGAGAGCCAGTTACATCATCCAGTC +
Preference number: 6 (lower is better)
Translates to: GVKENLPEVTAK*GFLESQLHHPV
Trigger: GACTGGATGATGTAACTGGCTCTCTAGGAAGCCTCACTTGGCCGTAACCTCAGGAAGGTTCTCTTTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295324.4
ENST00000422687.1
ENST00000453555.1
ENST00000457889.1
ENST00000611976.1
CDS TCA 72 bp GGCTTCGAAATGAGATGGGGTCAAAGAGAACCTTCCTaGGGTTACGGCCAAGTGAGGCTTCCTAGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: GFEMRWGQREPS*GYGQVRLPREP
Trigger: TGGCTCTCTAGGAAGCCTCACTTGGCCGTAACCTCAGGAAGGTTCTCTTTGACCCCATCTCATTTCGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295324.4
ENST00000422687.1
ENST00000453555.1
ENST00000457889.1
ENST00000611976.1
CDS CCA 72 bp ATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTaGAAGGGGAAGCAAACACGTCCTTCTTCACACGGT +
Preference number: 6 (lower is better)
Translates to: MAGEASGNLQSW*KGKQTRPSSHG
Trigger: ACCGTGTGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453555.1
ENST00000494083.1
CDS CCA 72 bp AGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGTGGAAGGGGAAGCAAACACGTCCTTCTTCACAC +
Preference number: 6 (lower is better)
Translates to: SMAGEASGNLQS*WKGKQTRPSSH
Trigger: GTGTGAAGAAGGACGTGTTTGCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453555.1
ENST00000494083.1
CDS CCA 72 bp CCAGTCTTGACCACAACCAGGACAAACAGTTCAGCATaGCTGGGGAGGCCTCAGGAAACTTACAATCATGGT +
Preference number: 6 (lower is better)
Translates to: PVLTTTRTNSSA*LGRPQETYNHG
Trigger: ACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGTTTGTCCTGGTTGTGGTCAAGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS TCA 72 bp ATGACAGGGCTATGTTACAGGGACACAGGAGCCAACTaGATGTATTCTCCATGGCCAGGGCTGGAACAACTT +
Preference number: 6 (lower is better)
Translates to: MTGLCYRDTGAN*MYSPWPGLEQL
Trigger: AAGTTGTTCCAGCCCTGGCCATGGAGAATACATTCAGTTGGCTCCTGTGTCCCTGTAACATAGCCCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS GCA 72 bp AAGATTACAATTGCAGGCTCTCACATTACTCGTTTCTaGAGCTCCCAAGAAGGGCATGCCATGTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: KITIAGSHITRF*SSQEGHAMSQG
Trigger: CCCCTGTGACATGGCATGCCCTTCTTGGGAGCTGCAGAAACGAGTAATGTGAGAGCCTGCAATTGTAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CCA 72 bp ATACACAGGTCAGGTCTCAGTGACTCTGGACGCTTTTaGAAGAGCAACCTCCGTCATCCCCTTCTTGATAAA +
Preference number: 6 (lower is better)
Translates to: IHRSGLSDSGRF*KSNLRHPLLDK
Trigger: TTTATCAAGAAGGGGATGACGGAGGTTGCTCTTCCAAAAGCGTCCAGAGTCACTGAGACCTGACCTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CCA 72 bp CCTTGTGGCTTCCTTCCAGAGTATAATATAAAAATGTaGGGAGGTGCAGTGGGGGAGAAGGGCTGTAATCCT +
Preference number: 6 (lower is better)
Translates to: PCGFLPEYNIKM*GGAVGEKGCNP
Trigger: AGGATTACAGCCCTTCTCCCCCACTGCACCTCCCCACATTTTTATATTATACTCTGGAAGGAAGCCACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 90 bp CACCTTTGGGATATGAACAGACTCTCCTACCCACTGTTCCACCACTaGGGGAAAGGAATCCTTATGTTAGATAGGAGGCCACAATGGACA +
Preference number: 6 (lower is better)
Translates to: HLWDMNRLSYPLFHH*GKGILMLDRRPQWT
Trigger: TGTCCATTGTGGCCTCCTATCTAACATAAGGATTCCTTTCCCCAAGTGGTGGAACAGTGGGTAGGAGAGTCTGTTCATATCCCAAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS TCA 72 bp ATGGATAGGATACAAAATACACAGGTCAGGTCTCAGTaGCTCTGGACGCTTTTGGAAGAGCAACCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: MDRIQNTQVRSQ*LWTLLEEQPPS
Trigger: TGACGGAGGTTGCTCTTCCAAAAGCGTCCAGAGTCACTGAGACCTGACCTGTGTATTTTGTATCCTATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CCA 72 bp TTCTTCACACGGTGGCAGCAAGGAGAAGTGCTGACATaGATAGGATACAAAATACACAGGTCAGGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: FFTRWQQGEVLT*IGYKIHRSGLS
Trigger: ACTGAGACCTGACCTGTGTATTTTGTATCCTATCCATGTCAGCACTTCTCCTTGCTGCCACCGTGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CAA 72 bp GATATGAACAGACTCTCCTACCCACTGTTCCACCACTaGGGGAAAGGAATCCTTATGTTAGATAGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: DMNRLSYPLFHH*GKGILMLDRRP
Trigger: TGGCCTCCTATCTAACATAAGGATTCCTTTCCCCAAGTGGTGGAACAGTGGGTAGGAGAGTCTGTTCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS TCA 72 bp CTTCTTGATAAATCCTTTTGGCACACCTTTGGGATATaGACAGACTCTCCTACCCACTGTTCCACCACTTGG +
Preference number: 6 (lower is better)
Translates to: LLDKSFWHTFGI*TDSPTHCSTTW
Trigger: CCAAGTGGTGGAACAGTGGGTAGGAGAGTCTGTTCATATCCCAAAGGTGTGCCAAAAGGATTTATCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CAA 90 bp TTTACACCTTCTCCCCAGATCCCATTAGTCACCAAGTCAAATAGATaGGACCACCGCATGTGGCTTCTCATAGCCATCAGGATAAAATAC +
Preference number: 6 (lower is better)
Translates to: FTPSPQIPLVTKSNR*DHRMWLLIAIRIKY
Trigger: GTATTTTATCCTGATGGCTATGAGAAGCCACATGCGGTGGTCCAATCTATTTGACTTGGTGACTAATGGGATCTGGGGAGAAGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS TCA 72 bp GTGGCAAAGTATTGGGCTGTCGAGGATGTCAGGATTTaGAGTCATTCTGAGATGGGAGGAAATGAACAAAAC +
Preference number: 6 (lower is better)
Translates to: VAKYWAVEDVRI*SHSEMGGNEQN
Trigger: GTTTTGTTCATTTCCTCCCATCTCAGAATGACTTCAAATCCTGACATCCTCGACAGCCCAATACTTTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422687.1
CDS GCA 72 bp AAACAAGCAAGGGGGAGAAGGTTAGAATTATCTATGTaGTACTGGGTTGGGATTGGAGACATCAGTATCAAC +
Preference number: 6 (lower is better)
Translates to: KQARGRRLELSM*YWVGIGDISIN
Trigger: GTTGATACTGATGTCTCCAATCCCAACCCAGTAGCACATAGATAATTCTAACCTTCTCCCCCTTGCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp CATTCTCCAATAAAAGAACCAAGCTCCTTGGAGACATaGACTCTAGGATGGAGCAGGAAATATACAAGACGA +
Preference number: 6 (lower is better)
Translates to: HSPIKEPSSLET*TLGWSRKYTRR
Trigger: TCGTCTTGTATATTTCCTGCTCCATCCTAGAGTCCATGTCTCCAAGGAGCTTGGTTCTTTTATTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 90 bp GGGTATGGCTTAACAATTATGGAAGTACTCTACAGGAGACTGGAATaGAACAATGAAATAAACGAATGGCTGATGGCAGAAGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: GYGLTIMEVLYRRLE*NNEINEWLMAEARF
Trigger: GAACCTGGCTTCTGCCATCAGCCATTCGTTTATTTCATTGTTCAATTCCAGTCTCCTGTAGAGTACTTCCATAATTGTTAAGCCATACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS TCA 72 bp TATGGAAGTACTCTACAGGAGACTGGAATTGAACAATaGAATAAACGAATGGCTGATGGCAGAAGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: YGSTLQETGIEQ*NKRMADGRSQV
Trigger: AACCTGGCTTCTGCCATCAGCCATTCGTTTATTTCATTGTTCAATTCCAGTCTCCTGTAGAGTACTTCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp GGGGAGAAGGTTAGAATTATCTATGTGCTACTGGGTTaGGATTGGAGACATCAGTATCAACTCATATTTAGC +
Preference number: 6 (lower is better)
Translates to: GEKVRIIYVLLG*DWRHQYQLIFS
Trigger: GCTAAATATGAGTTGATACTGATGTCTCCAATCCCAACCCAGTAGCACATAGATAATTCTAACCTTCTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 90 bp AGCAAACTAAGCACAGAGCTTTCTCATCTGAAGCAAGATCATGTTTaGAGAAGTCATGGATTCTGTTTTTCTTCTTGTGGTGTCACGCTC +
Preference number: 6 (lower is better)
Translates to: SKLSTELSHLKQDHV*RSHGFCFSSCGVTL
Trigger: GAGCGTGACACCACAAGAAGAAAAACAGAATCCATGACTTCTCAAAACATGATCTTGCTTCAGATGAGAAAGCTCTGTGCTTAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453555.1
CDS CAA 90 bp CTATGGGATCACATGAGGCCATTTATTTGTCAATTATATCTTTGGTaGAGGCTGTCATCATATCTCACCTGGTTCCTTTACACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LWDHMRPFICQLYLW*RLSSYLTWFLYTFS
Trigger: GGAGAAGGTGTAAAGGAACCAGGTGAGATATGATGACAGCCTCAACCAAAGATATAATTGACAAATAAATGGCCTCATGTGATCCCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 90 bp AGGTCTTGGTTTCTAATACATTCTCCAATAAAAGAACCAAGCTCCTaGGAGACATGGACTCTAGGATGGAGCAGGAAATATACAAGACGA +
Preference number: 6 (lower is better)
Translates to: RSWFLIHSPIKEPSS*ETWTLGWSRKYTRR
Trigger: TCGTCTTGTATATTTCCTGCTCCATCCTAGAGTCCATGTCTCCAAGGAGCTTGGTTCTTTTATTGGAGAATGTATTAGAAACCAAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS TCA 72 bp CAGTGGAGAAAACTAACAAACACCACCCCAAGCAGGTaGTTAAGGTCAATATCAGCAGTCATAAATCTTGTT +
Preference number: 6 (lower is better)
Translates to: QWRKLTNTTPSR*LRSISAVINLV
Trigger: AACAAGATTTATGACTGCTGATATTGACCTTAATCACCTGCTTGGGGTGGTGTTTGTTAGTTTTCTCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS GCA 72 bp AGATATTTTGCCATCAAAGAGTGGAGTATAAATCGCTaGTTCTTAATTGTGTGCTATGCCTTGTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: RYFAIKEWSINR*FLIVCYALWLP
Trigger: AGGAAGCCACAAGGCATAGCACACAATTAAGAAGCAGCGATTTATACTCCACTCTTTGATGGCAAAATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp AGTAATATCCTGGAAAAGGCAAAACTCTTATGGAGATaGCAAATAGACCAGTGGTTTCAGAAACTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SNILEKAKLLWR*QIDQWFQKLLV
Trigger: CACCAAGAGTTTCTGAAACCACTGGTCTATTTGCCATCTCCATAAGAGTTTTGCCTTTTCCAGGATATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 90 bp AAACCTATGGGATCACATGAGGCCATTTATTTGTCAATTATATCTTaGGTTGAGGCTGTCATCATATCTCACCTGGTTCCTTTACACCTT +
Preference number: 6 (lower is better)
Translates to: KPMGSHEAIYLSIIS*VEAVIISHLVPLHL
Trigger: AAGGTGTAAAGGAACCAGGTGAGATATGATGACAGCCTCAACCAAAGATATAATTGACAAATAAATGGCCTCATGTGATCCCATAGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp AATAACACCTTTGCAACAAGGAGCATGTCCAGGTCTTaGTTTCTAATACATTCTCCAATAAAAGAACCAAGC +
Preference number: 6 (lower is better)
Translates to: NNTFATRSMSRS*FLIHSPIKEPS
Trigger: GCTTGGTTCTTTTATTGGAGAATGTATTAGAAACCAAGACCTGGACATGCTCCTTGTTGCAAAGGTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 72 bp CACATGAGGCCATTTATTTGTCAATTATATCTTTGGTaGAGGCTGTCATCATATCTCACCTGGTTCCTTTAC +
Preference number: 6 (lower is better)
Translates to: HMRPFICQLYLW*RLSSYLTWFLY
Trigger: GTAAAGGAACCAGGTGAGATATGATGACAGCCTCAACCAAAGATATAATTGACAAATAAATGGCCTCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 72 bp TTTCTAATACATTCTCCAATAAAAGAACCAAGCTCCTaGGAGACATGGACTCTAGGATGGAGCAGGAAATAT +
Preference number: 6 (lower is better)
Translates to: FLIHSPIKEPSS*ETWTLGWSRKY
Trigger: ATATTTCCTGCTCCATCCTAGAGTCCATGTCTCCAAGGAGCTTGGTTCTTTTATTGGAGAATGTATTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS TCA 72 bp TCAGCAGTCATAAATCTTGTTGATAGTACGCAGCCTTaGTATATGATGAGAATGACATTTTACCTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: SAVINLVDSTQP*YMMRMTFYLCG
Trigger: ACCACAGAGGTAAAATGTCATTCTCATCATATATCAAGGCTGCGTACTATCAACAAGATTTATGACTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS GCA 72 bp TTCATATACAAAATACTGCTGGTCTTGGAACATGTTTaGAAATGGATGACTTTAGAGAATCCTGATGACCCT +
Preference number: 6 (lower is better)
Translates to: FIYKILLVLEHV*KWMTLENPDDP
Trigger: AGGGTCATCAGGATTCTCTAAAGTCATCCATTTGCAAACATGTTCCAAGACCAGCAGTATTTTGTATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CAA 72 bp TTAACAATTATGGAAGTACTCTACAGGAGACTGGAATaGAACAATGAAATAAACGAATGGCTGATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: LTIMEVLYRRLE*NNEINEWLMAE
Trigger: TTCTGCCATCAGCCATTCGTTTATTTCATTGTTCAATTCCAGTCTCCTGTAGAGTACTTCCATAATTGTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1
CDS CCA 72 bp AAGGTTAGAATTATCTATGTGCTACTGGGTTGGGATTaGAGACATCAGTATCAACTCATATTTAGCTTAATA +
Preference number: 6 (lower is better)
Translates to: KVRIIYVLLGWD*RHQYQLIFSLI
Trigger: TATTAAGCTAAATATGAGTTGATACTGATGTCTCCAATCCCAACCCAGTAGCACATAGATAATTCTAACCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494083.1