RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42BPB (Homo sapiens)

Ensembl gene IDs: ENSG00000198752

Ensembl transcript IDs: ENST00000361246.7, ENST00000558321.5, ENST00000558867.1, ENST00000559043.1, ENST00000559245.1, ENST00000559790.1, ENST00000560492.1, ENST00000561271.1, ENST00000634889.1

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTaGACAGCCTTGCCAAGCAGCCGACCGGTGGGAGGACAGGGGAAG +
Preference number: 1 (lower is better)
Translates to: GGAGPLSADLGKCTS*TALPSSRPVGGQGK
Trigger: CTTCCCCTGTCCTCCCACCGGTCGGCTGCTTGGCAAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 90 bp GGAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTaGCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGCCAAGCAG +
Preference number: 1 (lower is better)
Translates to: GGQWGGRARRCWATQ*RLGEVHVLNSLAKQ
Trigger: CTGCTTGGCAAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 90 bp CCGAAGCAGCCGCGTCATGACGGGTTTCTGCTGAGGAAGTGGTGTTaGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGAC +
Preference number: 1 (lower is better)
Translates to: PKQPRHDGFLLRKWC*QGPICPLGLSGVGD
Trigger: GTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAACCCGTCATGACGCGGCTGCTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 90 bp CTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTGAGGAAGTaGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTG +
Preference number: 1 (lower is better)
Translates to: LLPKQPRHDGFLLRK*CWQGPICPLGLSGV
Trigger: CACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 90 bp CCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTaGGGAAGTGGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGT +
Preference number: 1 (lower is better)
Translates to: PDVCFRSSRVMTGFC*GSGVGRAPYALSGC
Trigger: ACAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 90 bp CGGGTTGTCAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTaGAGATGGAACAGCATCGCCTCACAGCTGTGCAGACGAACAGAT +
Preference number: 1 (lower is better)
Translates to: RVVRGGRQAVWGSFM*RWNSIASQLCRRTD
Trigger: ATCTGTTCGTCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTGACAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 90 bp GTCAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATaGAACAGCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTC +
Preference number: 1 (lower is better)
Translates to: VRGGRQAVWGSFMCR*NSIASQLCRRTDVV
Trigger: GACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 90 bp TGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTaGAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCATA +
Preference number: 1 (lower is better)
Translates to: WGSFMCRWNSIASQL*RRTDVVYCHEQCGI
Trigger: TATGCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 90 bp TTGTCTTCTTCATCTCCATATCTACAAAGTGATTCTACATTTCCTTaGACAACACTGGAGGGCCCGCTCAGTCTTGGCACTGACGCTGGA +
Preference number: 1 (lower is better)
Translates to: LSSSSPYLQSDSTFP*TTLEGPLSLGTDAG
Trigger: TCCAGCGTCAGTGCCAAGACTGAGCGGGCCCTCCAGTGTTGTCCAAGGAAATGTAGAATCACTTTGTAGATATGGAGATGAAGAAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 90 bp AACAGCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTaGCACGAACAATGCGGCATAAAACTGATCAATATTATAATAAAG +
Preference number: 1 (lower is better)
Translates to: NSIASQLCRRTDVVY*HEQCGIKLINIIIK
Trigger: CTTTATTATAATATTGATCAGTTTTATGCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCGTCCTGAACAGCCTTaGCAAGCAGCCGACCGGTGG +
Preference number: 2 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLRPEQP*QAADRW
Trigger: CCACCGGTCGGCTGCTTGGCAAGGCTGTTCAGGACG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGGCGCCCTGGGGCTCTaGCTTCCCTCAGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNGALGL*LPSAQQ
Trigger: CTGCTGGGCTGAGGGAAGTCAGAGCCCCAGGGCGCC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR GCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTGGGGGTCCTTCATGTaGAGATGGAACAGCATCGCC +
Preference number: 2 (lower is better)
Translates to: GVGRAPYALSGCQGWETGWGSFM*RWNSIA
Trigger: GGCGATGCTGTTCCATCTGCACATGAAGGACCCCCA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR GCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTGGGCCGGGGCCAGTGTaGAGGAGTGTGTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPGPGPV*RSVLGG
Trigger: CCCACCCAACACACTCCTGCACACTGGCCCCGGCCC...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTTGTCCATGACTAGGTaGTCAGCAGGACTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLLSMTR*SAGLLQ
Trigger: CTGCAGAAGTCCTGCTGACCACCTAGTCATGGACAA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTCCTTCATGTGCAGATaGAACAGCATCGCCTCACAG +
Preference number: 2 (lower is better)
Translates to: GVGRAPYALSGCQGWETGSFMCR*NSIASQ
Trigger: CTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATGCTTCGTGGCGCCCTaGGGCTCTGACTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITCFVAP*GSDFPQ
Trigger: CTGAGGGAAGTCAGAGCCCCAGGGCGCCACGAAGCA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCTCAGTCTTGGCACTaGCGCTGGAGGCCATCTCCA +
Preference number: 2 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITAQSWH*RWRPSP
Trigger: TGGAGATGGCCTCCAGCGTCAGTGCCAAGACTGAGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCGAAGCAGCCGCGTCATaGCGGGTTTCTGCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAEAAAS*RVSAEE
Trigger: TTCCTCAGCAGAAACCCGTCATGACGCGGCTGCTTC...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTAGTAGTAGATACTGGTaGCACTTCATGGCTGCGACC +
Preference number: 2 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLSSRYW*HFMAAT
Trigger: GGTCGCAGCCATGAAGTGTCACCAGTATCTACTACT...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGGGAGACAGGCTGTATaGGGGTCCTTCATGTGCAGA +
Preference number: 2 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNGRQAV*GSFMCR
Trigger: TCTGCACATGAAGGACCCCCATACAGCCTGTCTCCC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTCTGAGGAAGTGGTGTTaGCAGGGCCCCATATGCCCT +
Preference number: 2 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPLRKWC*QGPICP
Trigger: AGGGCATATGGGGCCCTGCCAACACCACTTCCTCAG...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTATGACGGGTTTCTGCTaGGGAAGTGGTGTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPMTGFC*GSGVGR
Trigger: CCTGCCAACACCACTTCCTCAGCAGAAACCCGTCAT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTTCCTTGGACAACACTaGAGGGCCCGCTCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: DRLYGGPSCADGTASPHSFLGQH*RARSVL
Trigger: CAAGACTGAGCGGGCCCTCCAGTGTTGTCCAAGGAA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CAA 90 bp AACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTTaGTCCATGACTAGGTGGTCAGCAGGACTTCTGCAGCTGACTGTG +
Preference number: 2 (lower is better)
Translates to: NLMHTGTQGVTGPGP*SMTRWSAGLLQLTV
Trigger: CACAGTCAGCTGCAGAAGTCCTGCTGACCACCTAGTCATGGACAAAGGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTATCTGGTACAAAGGGTaGGGTGAAATCCACGCGCAG +
Preference number: 2 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPIWYKG*GEIHAQ
Trigger: CTGCGCGTGGATTTCACCTCACCCTTTGTACCAGAT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGATTCTACATTTCCTTaGACAACACTGGAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHDSTFP*TTLEGP
Trigger: CGGGCCCTCCAGTGTTGTCCAAGGAAATGTAGAATC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAACAGATGTGGTCTACTaGCACGAACAATGCGGCATA +
Preference number: 2 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITTDVVY*HEQCGI
Trigger: TATGCCGCATTGTTCGTGGCAGTAGACCACATCTGT...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGGAAAACAGCACAGCTaGCTTCACAGTAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITGKQHS*LHSSRY
Trigger: GTATCTACTACTGTGAAGTCAGCTGTGCTGTTTTCC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTTCCATATCTACAAAGTaGTTCTACATTTCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPSISTK*FYISLD
Trigger: GTCCAAGGAAATGTAGAATCACTTTGTAGATATGGA...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR GCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGATCGCCTCACAGCTGTaGAGACGAACAGATGTGGTC +
Preference number: 2 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGIASQL*RRTDVV
Trigger: GACCACATCTGTTCGTCTGCACAGCTGTGAGGCGAT...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 72 bp TTGGACAACACTGGAGGGCCCGCTCAGTCTTGGCACTaGCGCTGGAGGCCATCTCCAGCTCCCTGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: LDNTGGPAQSWH*RWRPSPAPWPL
Trigger: CAGGGGCCAGGGAGCTGGAGATGGCCTCCAGCGTCAGTGCCAAGACTGAGCGGGCCCTCCAGTGTTGTCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 72 bp GGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTaGACAGCCTTGCCAAGCAGCCGACCGGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: GPLSADLGKCTS*TALPSSRPVGG
Trigger: TCCTCCCACCGGTCGGCTGCTTGGCAAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp GTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTaGCAAGCAGCCGACCGGTGGGAGGACAGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: VPTWGSARPEQP*QAADRWEDRGS
Trigger: GCTTCCCCTGTCCTCCCACCGGTCGGCTGCTTGGCAAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp TGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTaGCGACTTGGGGAAGTGCACGTCCTGAACAGCCTT +
Preference number: 3 (lower is better)
Translates to: WGGRARRCWATQ*RLGEVHVLNSL
Trigger: AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp AAGGGTGAGGTGAAATCCACGCGCAGGGGATTGCTGTaGCGTGGGCCGGGGCCAGTGTGCAGGAGTGTGTTG +
Preference number: 3 (lower is better)
Translates to: KGEVKSTRRGLL*RGPGPVCRSVL
Trigger: CAACACACTCCTGCACACTGGCCCCGGCCCACGGCACAGCAATCCCCTGCGCGTGGATTTCACCTCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 72 bp CCGCGTCATGACGGGTTTCTGCTGAGGAAGTGGTGTTaGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: PRHDGFLLRKWC*QGPICPLGLSG
Trigger: CCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAACCCGTCATGACGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp TTTCTGCTGAGGAAGTGGTGTTGGCAGGGCCCCATATaGCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: FLLRKWCWQGPI*PLGLSGVGDRL
Trigger: CAGCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 72 bp AAGCAGCCGCGTCATGACGGGTTTCTGCTGAGGAAGTaGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTG +
Preference number: 3 (lower is better)
Translates to: KQPRHDGFLLRK*CWQGPICPLGL
Trigger: CAACCCGAGAGGGCATATGGGGCCCTGCCAACACCACTTCCTCAGCAGAAACCCGTCATGACGCGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CAA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTGCTGAGGAAGTGGTGTaGGCAGGGCCCCATATGCCC +
Preference number: 3 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPAEEVV*AGPHMP
Trigger: GGGCATATGGGGCCCTGCCAACACCACTTCCTCAGC...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 72 bp GAGCTGGTCACTCAACATCTGGTACAAAGGGTGAGGTaGAATCCACGCGCAGGGGATTGCTGTGCCGTGGGC +
Preference number: 3 (lower is better)
Translates to: ELVTQHLVQRVR*NPRAGDCCAVG
Trigger: GCCCACGGCACAGCAATCCCCTGCGCGTGGATTTCACCTCACCCTTTGTACCAGATGTTGAGTGACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp AGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTaGAGATGGAACAGCATCGCCTCACAGCTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: RGGRQAVWGSFM*RWNSIASQLCR
Trigger: TCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 72 bp CCACAGAGCTGGTCACTCAACATCTGGTACAAAGGGTaGGGTGAAATCCACGCGCAGGGGATTGCTGTGCCG +
Preference number: 3 (lower is better)
Translates to: PQSWSLNIWYKG*GEIHAQGIAVP
Trigger: CGGCACAGCAATCCCCTGCGCGTGGATTTCACCTCACCCTTTGTACCAGATGTTGAGTGACCAGCTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CCA 72 bp GGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATaGAACAGCATCGCCTCACAGCTGTGCAGACGAACA +
Preference number: 3 (lower is better)
Translates to: GRQAVWGSFMCR*NSIASQLCRRT
Trigger: TGTTCGTCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR-3UTR CAA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGAGGGCCCGCTCAGTCTaGGCACTGACGCTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGRARSV*ALTLEA
Trigger: GGCCTCCAGCGTCAGTGCCAAGACTGAGCGGGCCCT...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR TCA 72 bp AGGAAAGTTTCAGGAACTAGGGAAAAGACTGGGTACTaGGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RKVSGTREKTGY*GCVPRCLLPKQ
Trigger: CTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCTTTTCCCTAGTTCCTGAAACTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp TTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTaGAGACGAACAGATGTGGTCTACTGCCACGAACAA +
Preference number: 3 (lower is better)
Translates to: FMCRWNSIASQL*RRTDVVYCHEQ
Trigger: TTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR GCA 72 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTaGCACGAACAATGCGGCATAAAACTGATCAATATT +
Preference number: 3 (lower is better)
Translates to: ASQLCRRTDVVY*HEQCGIKLINI
Trigger: AATATTGATCAGTTTTATGCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCCTTGGCCGACATGGTaGCGCGCGGCCCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLPWPTW*RAARSR
Trigger: TCGGGAGCGGGCCGCGCGGCACCATGTCGGCCAAGG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGGCGCCCTGGGGCTCTaGCTTCCCTCAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLGALGL*LPSAQQ
Trigger: CTGCTGGGCTGAGGGAAGTCAGAGCCCCAGGGCGCC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTGCCGGACCACGCGGTaGTGCTTCTCCAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLCRTTR*CFSSPR
Trigger: GCGGGGGCTGGAGAAGCAGCACCGCGTGGTCCGGCA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGCCAGAGCCAGGGCCTaGGTGGTGGGCAACGGCACA +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLARARA*VVGNGT
Trigger: TGTGCCGTTGCCCACCACGCAGGCCCTGGCTCTGGC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGGGCCGGGGCCAGTGTaGAGGAGTGTGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLGPGPV*RSVLGG
Trigger: CCCACCCAACACACTCCTGCACACTGGCCCCGGCCC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCCCACGCGCAGGGGATTaGTGTGCCGTGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGPRAGD*CAVGRG
Trigger: GCCCCGGCCCACGGCACAGCAATCCCCTGCGCGTGG...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCCGCAGGGGATTGCTGTaGCGTGGGCCGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGRRGLL*RGPGPV
Trigger: CACTGGCCCCGGCCCACGGCACAGCAATCCCCTGCG...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCCAGTGGCTGCTTCGTaGCGCCCTGGGGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLPVAAS*RPGALT
Trigger: AGTCAGAGCCCCAGGGCGCCACGAAGCAGCCACTGG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTCCTCCTGGACAAGCTaGTTGGCCCGGATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLSSWTS*LARISA
Trigger: GGCGGAGATCCGGGCCAAGCAGCTTGTCCAGGAGGA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCGGGTATCCCAGTGGCTaGTTCGTGGCGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGGYPSG*FVAPWG
Trigger: GCCCCAGGGCGCCACGAAGCAGCCACTGGGATACCC...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCGGGAGCTGGCTCCTGTaGGGGGAGTTGGGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGGSWLL*GELGLG
Trigger: ACCGAGCCCCAACTCCCCCCACAGGAGCCAGCTCCC...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGGCCCAGGAGGGCAGTaGGGTGGCAGGGCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLGPGGQ*GGRARR
Trigger: CCGCCTAGCCCTGCCACCCCACTGCCCTCCTGGGCC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGCATTTCCTGCCGCATaGCGTCCACCTTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLAFPAA*RPPSAW
Trigger: CCACGCAGAAGGTGGACGCCATGCGGCAGGAAATGC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCTCGGTTTGAATTGCTaGGGGCCCGAGATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLLGLNC*GPEMSR
Trigger: ACGGCTCATCTCGGGCCCTCAGCAATTCAAACCGAG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGCAGGCCACAGGGCCTaGCTGCACCACGACACTCGC +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLAGHRA*LHHDTR
Trigger: GCGAGTGTCGTGGTGCAGGCAGGCCCTGTGGCCTGC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCAGCGCGGTGATCCACTaGCAGTCGCCGTTCACCAGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGSAVIH*QSPFTS
Trigger: GCTGGTGAACGGCGACTGCCAGTGGATCACCGCGCT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTGCTTCGTGGCGCCCTaGGGCTCTGACTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGCFVAP*GSDFPQ
Trigger: CTGAGGGAAGTCAGAGCCCCAGGGCGCCACGAAGCA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCAGCCCCCGCAGCCGCTaGGTGGAGTCCTCACGCTCT +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVSPRSR*VESSRS
Trigger: AGAGCGTGAGGACTCCACGCAGCGGCTGCGGGGGCT...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGAGCTCCTGCGCGCGTaGCCTCCGGCCTTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHELLRA*PPALRV
Trigger: GACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTAGGTCCATGAGCACCTaGATGCCGTCGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLRSMST*MPSPGP
Trigger: GGGCCCAGGCGACGGCATGCAGGTGCTCATGGACCT...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCGTGTCACAGGCCGGCTaGTCCAGGCCTTCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCVSQAG*SRPSRG
Trigger: CCCCCTCGAAGGCCTGGAGCAGCCGGCCTGTGACAC...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCACCTTGGCCGACATaGTGCCGCGCGGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITAPWPT*CRAARS
Trigger: GGAGCGGGCCGCGCGGCACCATGTCGGCCAAGGTGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTGCAGGGCCAGCTGGTaGCTTTCTGAATCATGCACC +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLCRASW*LSESCT
Trigger: GGTGCATGATTCAGAAAGCCACCAGCTGGCCCTGCA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCGGGCTTGTTCCTGGATaGAGGCTGGCGAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGGLVPG*RLASQV
Trigger: AACCTGGCTCGCCAGCCTCCATCCAGGAACAAGCCC...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGCCCCTGTGGCGAGCTaGCGGCTTCAGGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLAPVAS*RLQVSQ
Trigger: CTGTGACACCTGAAGCCGCCAGCTCGCCACAGGGGC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGGGAGACAGGCTGTATaGGGGTCCTTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLGRQAV*GSFMCR
Trigger: TCTGCACATGAAGGACCCCCATACAGCCTGTCTCCC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCAGGACAGGGGAAGCCTaGCCCAAGCTGTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGRTGEA*PKLWTS
Trigger: GCTTGTCCACAGCTTGGGCCAGGCTTCCCCTGTCCT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGAAGCACGCGGTCTCTaGTCTTTTCAGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLEARGL*SFQHLP
Trigger: TGGGAGATGCTGAAAAGAGCAGAGACCGCGTGCTTC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTCTGGGCACGGAGCTCTaGCATGCGCTCGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLLGTEL*HALVQL
Trigger: GAGCTGAACGAGCGCATGGCAGAGCTCCGTGCCCAG...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTTGTCCAGCTTCTGGCTaGGGCGCACCTTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLCPASG*GAPSTA
Trigger: CGCTGTGGAAGGTGCGCCGCAGCCAGAAGCTGGACA...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCGTGCCCTCCGGCCTTaGGGGTCCACGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNRALRP*GSTYSP
Trigger: GGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCGGCGCAGGGCCGAGTaGCTGCACTCGGTGTACAGG +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNRRRAE*LHSVYR
Trigger: CCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGCCCGAGATGAGCCGTaGAGGGACTGCACGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVARDEP*RDCTVW
Trigger: CCAGACCGTGCAGTCCCTCCACGGCTCATCTCGGGC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCGAGCCAGGGCCTGCGTaGTGGGCAACGGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSEPGPA*WATAQR
Trigger: CCGCTGTGCCGTTGCCCACCACGCAGGCCCTGGCTC...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGCTCCCTGGCCCCTGTaGCGAGCTGGCGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGAPWPL*RAGGFR
Trigger: CCTGAAGCCGCCAGCTCGCCACAGGGGCCAGGGAGC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCAGGGCGGGGCGGGGTaGGGTATCCCAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAQGGAG*GIPVAA
Trigger: AGCAGCCACTGGGATACCCCACCCCGCCCCGCCCTG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCGTAGTGCAGCGCGGTaGTCCACTGGCAGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNRSAAR*STGSRR
Trigger: ACGGCGACTGCCAGTGGATCACCGCGCTGCACTACG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGAGATCAGTCTCTGGATaGGGTCCTTCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLRSVSG*GPSLLQ
Trigger: CTGAAGAAGCGAAGGACCTCATCCAGAGACTGATCT...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCTGAGGGCCCGAGATaGGCCGTGGAGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITAEGPR*AVEGLH
Trigger: GTGCAGTCCCTCCACGGCTCATCTCGGGCCCTCAGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTCTCGGCGTGTAGCATaGATGACATCTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGSRRVA*MTSEAR
Trigger: CCTGGCCTCAGATGTCATTCATGCTACACGCCGAGA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGAGCCGCAGGCCACATaGGCTCCTGCGCGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNEPQAT*APARVP
Trigger: GGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCACTCGCTGTACACCGTaGCGTGGGTGGGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCTRCTP*RGWGCN
Trigger: GTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGT...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCTCAGAGGCAGGTCCATaGGCACCTGCATGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVSEAGP*APACRR
Trigger: GCGACGGCATGCAGGTGCTCATGGACCTGCCTCTGA...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCATGACGGGTTTCTGCTaGGGAAGTGGTGTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGMTGFC*GSGVGR
Trigger: CCTGCCAACACCACTTCCTCAGCAGAAACCCGTCAT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGGGAAGTGCACGTCCTaGACAGCCTTGCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLGKCTS*TALPSS
Trigger: GCTGCTTGGCAAGGCTGTTCAGGACGTGCACTTCCC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTTCAGGGCGCTCTCGTTaGGCCAGGGCCCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPSGRSR*ARARPG
Trigger: TCCTGGACGGGCCCTGGCGCAACGAGAGCGCCCTGA...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATAGCACCGCCAGGCACTaGACGCTGCCGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHSTARH*TLPGAT
Trigger: TGTGGCTCCCGGCAGCGTGCAGTGCCTGGCGGTGCT...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCCTAGGCCGACATCTTaGGCTCCGTCCCGACGGCGC +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAPRPTS*APSRRR
Trigger: GCGCCGTCGGGACGGAGCCCAAGATGTCGGCCTAGG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGCCCGCAGCCGCTGCGTaGAGTCCTCACGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVPAAAA*SPHALG
Trigger: GCCAAGAGCGTGAGGACTCCACGCAGCGGCTGCGGG...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCCAGGGCCTGCGTGGTaGGCAACGGCACAGCGGATG +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAPGPAW*ATAQRM
Trigger: CATCCGCTGTGCCGTTGCCCACCACGCAGGCCCTGG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCGAACTGGTGAGCTTTTaGCTTCGGTCCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGELVSF*LRSSQS
Trigger: GCTCTGGCTGGACCGAAGCCAAAAGCTCACCAGTTC...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTGTCTGCATCCACGATaGCAGCTGTCAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGCLHPR*QLSGWP
Trigger: AGGCCATCCTGACAGCTGCCATCGTGGATGCAGACA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCCTGCATGCCGTCGCCTaGGCCCATGTGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGLHAVA*AHVGHV
Trigger: CACGTGGCCCACATGGGCCCAGGCGACGGCATGCAG...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACACACAGAGCCTGTCCCTaGGCACCGCCAGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITHRACP*APPGTA
Trigger: TGCAGTGCCTGGCGGTGCTCAGGGACAGGCTCTGTG...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCAGGTGTCCGGCACGTTaGGAACCGCTCCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCRCPAR*EPLPRT
Trigger: AGTTCTCGGGAGCGGTTCTCAACGTGCCGGACACCT...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCATCTGGTACAAAGGGTaGGGTGAAATCCACGCGCAG +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGIWYKG*GEIHAQ
Trigger: CTGCGCGTGGATTTCACCTCACCCTTTGTACCAGAT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGCAGGGCCGAGTGGCTaGACTCGGTGTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNAGPSG*TRCTGR
Trigger: TCTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGTCTGGGTGGACTCTTaGAGCTTCCTGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLVWVDS*SFLLSS
Trigger: GGAGCTGAGCAGGAAGCTGCAAGAGTCCACCCAGAC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATCGGACCACGCGGTGCTaGTTCTCCAGCCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNRTTRC*FSSPRS
Trigger: GCTGCGGGGGCTGGAGAAGCAGCACCGCGTGGTCCG...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGTTCCGATGCCTCGCTaGACGTCCACGCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGVPMPR*TSTPRG
Trigger: GCCTCTGGGCGTGGACGTGCAGCGAGGCATCGGAAC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGCCCGTCCCCCTGGATaGTCAGCAGGCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHARPPG*SAGRTQ
Trigger: CTGGGTTCTGCCTGCTGAGCATCCAGGGGGACGGGC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPRRPMV*THSMVR
Trigger: GCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCG...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCCACAGGGCCTGCCTaGACCACGACACTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITATGPA*TTTLAG
Trigger: ACCAGCGAGTGTCGTGGTGCAGGCAGGCCCTGTGGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGGCTGCCCGTCCCCCTaGATGCTCAGCAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITGCPSP*MLSRQN
Trigger: GTTCTGCCTGCTGAGCATCCAGGGGGACGGGCAGCC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCGGTGGGGTATCCCAGTaGCTGCTTCGTGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAGGVSQ*LLRGAL
Trigger: CAGGGCGCCACGAAGCAGCCACTGGGATACCCCACC...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGCCTGGCCCAAGCTGTaGACAAGCTGTGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNAWPKL*TSCVCR
Trigger: GCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCCAAGCAGCCGACCGGTaGGAGGACAGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGQAADR*EDRGSL
Trigger: CAGGCTTCCCCTGTCCTCCCACCGGTCGGCTGCTTG...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CAA 72 bp CATTTCCTTGGACAACACTGGAGGGCCCGCTCAGTCTaGGCACTGACGCTGGAGGCCATCTCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HFLGQHWRARSV*ALTLEAISSSL
Trigger: CAGGGAGCTGGAGATGGCCTCCAGCGTCAGTGCCAAGACTGAGCGGGCCCTCCAGTGTTGTCCAAGGAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGCTGCTCCAGCTTCTTaGGCCGCACCTTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVAAPAS*AAPWPT
Trigger: TGTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTTGATGCTGAACTGGTaGGCTTTTGGCTTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGLMLNW*AFGFGP
Trigger: TGGACCGAAGCCAAAAGCTCACCAGTTCAGCATCAA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGCTCAGTCTTGGCACTaGCGCTGGAGGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNAQSWH*RWRPSP
Trigger: TGGAGATGGCCTCCAGCGTCAGTGCCAAGACTGAGC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCAGTAGTAGATACTGGTaGCACTTCATGGCTGCGACC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGSSRYW*HFMAAT
Trigger: GGTCGCAGCCATGAAGTGTCACCAGTATCTACTACT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCCCGTCCAGGAGCAGCTaGTCCAGCTTCTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGPSRSS*SSFLSR
Trigger: GCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGG...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGAGCCGTGGAGGGACTaGACGGTCTGGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHEPWRD*TVWVDS
Trigger: AGAGTCCACCCAGACCGTGCAGTCCCTCCACGGCTC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGCACCCACTCCATGGTaGGCACATCAAAGACGTCCA +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLAPTPW*AHQRRP
Trigger: TGGACGTCTTTGATGTGCGCACCATGGAGTGGGTGC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCGTCCTGAACAGCCTTaGCAAGCAGCCGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWARPEQP*QAADRW
Trigger: CCACCGGTCGGCTGCTTGGCAAGGCTGTTCAGGACG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCACTGCACGGTCTGGGTaGACTCTTGCAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCTARSG*TLAASC
Trigger: GCAGGAAGCTGCAAGAGTCCACCCAGACCGTGCAGT...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACAACGGCACAGCGGATaGCCTCTGCGGGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVQRHSG*PLRGPS
Trigger: GCTCGGCCCCCGCAGAGGCCATCCGCTGTGCCGTTG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGGTATTGGGCACACCTaGGGGGCACCGTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNGIGHT*GAPSLQ
Trigger: CTGCAAAGACGGTGCCCCCCAGGTGTGCCCAATACC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCCTGTACACCGTGACGTaGGTGGGGCTGCAACTACAG +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVLYTVT*VGLQLQ
Trigger: CTGTAGTTGCAGCCCCACCCACGTCACGGTGTACAG...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGGCGAGCCAGGTTGGTaGGAGCGGGGCCCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVGEPGW*ERGPAF
Trigger: AAAGGCCGGGCCCCGCTCCCACCAACCTGGCTCGCC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCGGCTCGGTGGGCCGCTaGGGTTGGAGCTATTCGATG +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSGSVGR*GWSYSM
Trigger: CATCGAATAGCTCCAACCCCAGCGGCCCACCGAGCC...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGGGATTGCTGTGCCGTaGGCCGGGGCCAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNGIAVP*AGASVQ
Trigger: CTGCACACTGGCCCCGGCCCACGGCACAGCAATCCC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
3UTR CAA 72 bp CACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTTaGTCCATGACTAGGTGGTCAGCAGGACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HTGTQGVTGPGP*SMTRWSAGLLQ
Trigger: CTGCAGAAGTCCTGCTGACCACCTAGTCATGGACAAAGGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCCTTCCAGCTCTTTCCTaGGCTTCTCAGCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVLPALS*ASQLSA
Trigger: TGCGGAGAGCTGAGAAGCTCAGGAAAGAGCTGGAAG...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATTTCCCAGTGGGCCACTaGCTCCTTCTTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHFPVGH*LLLGCQ
Trigger: CTGGCAGCCAAGAAGGAGTCAGTGGCCCACTGGGAA...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTACAGTCCCATGTGGCTaGAGCAAAGCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLTVPCG*SKAGTP
Trigger: AGGAGTACCTGCTTTGCTTCAGCCACATGGGACTGT...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCGCCCGTATTTGCCCATaGCGTCCTCCATCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAARICP*RPPSPA
Trigger: TGCAGGCGATGGAGGACGGCATGGGCAAATACGGGC...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGTGCCGGGACACCTTCTaGTTCTGGGCACGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVCRDTF*FWARSS
Trigger: AGAGCTCCGTGCCCAGAAGCAGAAGGTGTCCCGGCA...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAATGGCGTCCACCTTCTaGGTGGCCACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITMASTF*VATSIS
Trigger: GGAGATGGAGGTGGCCACGCAGAAGGTGGACGCCAT...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGCTCTCCGCATTTCCTaGCGCATGGCGTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGALRIS*RMASTF
Trigger: GAAGGTGGACGCCATGCGGCAGGAAATGCGGAGAGC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCACCAGGTTTAGAGGCTaGCCGTCCCCCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWATRFRG*PSPWML
Trigger: GAGCATCCAGGGGGACGGGCAGCCTCTAAACCTGGT...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTAGCATCTCTCGCCTCTaGTGCAGTCTCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLSISRL*CSLSSS
Trigger: AGAGGAAGAGAGACTGCAGCAGAGGCGAGAGATGCT...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGTGTCCCCAGATGTCTaGTTCCGAAGCAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGVSPDV*FRSSRV
Trigger: GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACAC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTGCTGGGCCACTCAGTaGCGACTTGGGGAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWACWATQ*RLGEVH
Trigger: GTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCA...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGGCAGGGCTAGGCGGTaGTGGGCCACTCAGTGCCGA +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVGRARR*WATQCR
Trigger: TCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGGCACATCCTCATCTTTaGTTAATGTGTTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLAHPHL*LMCWTA
Trigger: TGCAGTCCAACACATTAACCAAAGATGAGGATGTGC...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGCTGGTGCTCTAAGGTaGCACCCGCTCCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVAGALR*HPLPGL
Trigger: GAGGCCGGGGAGCGGGTGCCACCTTAGAGCACCAGC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGCCGTGGCCATGAGCTaGCAGCCTTTGGTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVAVAMS*QPLVSG
Trigger: TCCGGAAACCAAAGGCTGCCAGCTCATGGCCACGGC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTCATTGAACTTTCTGTaGAATGGCTTCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLSLNFL*NGFVLW
Trigger: CCAGAGAACGAAGCCATTCCACAGAAAGTTCAATGA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTTCCTGGATGGAGGCTaGCGAGCCAGGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAFLDGG*RARLVG
Trigger: TCCCACCAACCTGGCTCGCCAGCCTCCATCCAGGAA...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCATGGAGTTGAGTGTTTaGTGGAGTCCGAATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGMELSV*WSPNQA
Trigger: AGCCTGATTCGGACTCCACCAAACACTCAACTCCAT...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCGCAGACGAACAGATGTaGTCTACTGCCACGAACAAT +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGADEQM*STATNN
Trigger: ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGC...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCTCCTTGCTTCACCTTaGGGGCCTCCAGCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHLLASP*GPPARF
Trigger: AAAGCGAGCTGGAGGCCCTCAAGGTGAAGCAAGGAG...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGTCCTCCTGCTGCTCTaGTGCAGCCACAGACATCGA +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVVLLLL*CSHRHR
Trigger: TCGATGTCTGTGGCTGCATCAGAGCAGCAGGAGGAC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTGTGGGCCACGTGGTTaGAGTTGGTTGGGTTGGATA +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCCGPRG*SWLGWI
Trigger: TATCCAACCCAACCAACTTCAACCACGTGGCCCACA...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCTGGGCCTTTGTCCATaGCTAGGTGGTCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWALGLCP*LGGQQD
Trigger: GTCCTGCTGACCACCTAGTCATGGACAAAGGCCCAG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCAGATGTAGTCAGGTGTaGCCACGGCCACGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWARCSQV*PRPRRT
Trigger: AGTCCTCCGTGGCCGTGGGCACACCTGACTACATCT...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATCCGTCCTCCATCGCCTaGAGGATCTCCGGCGAGATG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNPSSIA*RISGEM
Trigger: CATCTCGCCGGAGATCCTGCAGGCGATGGAGGACGG...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCACTCTTGCAGCTTCCTaGTCAGCTCCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCTLAAS*SAPASP
Trigger: AGGAGAAGCTGGAGCTGAGCAGGAAGCTGCAAGAGT...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTCAACCAGTTGCTTGTaGAGCTCCTCCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCSTSCL*SSSFSC
Trigger: GCAGGAGAAGGAGGAGCTGCACAAGCAACTGGTTGA...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGCCATGTCCTCCTGCTaGTCTGATGCAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVAMSSC*SDAATD
Trigger: GTCTGTGGCTGCATCAGAGCAGCAGGAGGACATGGC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCAGAGGCCTCTTGGACTaGTCGGGAGGTATTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSRGLLD*SGGIGH
Trigger: GTGCCCAATACCTCCCGAGCAGTCCAAGAGGCCTCT...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGCAGTCACAGACGACTaGATATGCGCGCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGAVTDD*ICALPS
Trigger: GGATGGCAGCGCGCATATGCAGTCGTCTGTGACTGC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTAGGGACTGCACGGTCTaGGTGGACTCTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPRDCTV*VDSCSF
Trigger: GAAGCTGCAAGAGTCCACCCAGACCGTGCAGTCCCT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCCACCCTGAATATACATaGAATATCTCGGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GVGRAPYALSGCQGWETGHPEYT*NISACS
Trigger: GCTACACGCCGAGATATTCCATGTATATTCAGGGTG...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATGTAGGGCTTGTTCCTaGATGGAGGCTGGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITCRACS*MEAGEP
Trigger: TGGCTCGCCAGCCTCCATCCAGGAACAAGCCCTACA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCTGAGGAAGTGGTGTTaGCAGGGCCCCATATGCCCT +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWALRKWC*QGPICP
Trigger: AGGGCATATGGGGCCCTGCCAACACCACTTCCTCAG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGGGAGGCCTCACGTCTaGCCAATTCCTCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVGRPHV*PIPLHK
Trigger: TTTATGAAGAGGAATTGGTCAGACGTGAGGCCTCCC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCCAGCTGGTGGCTTTCTaGATCATGCACCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVQLVAF*IMHLLL
Trigger: AAGAAGGAGGTGCATGATTCAGAAAGCCACCAGCTG...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGGGTCCAGTGTTCTTaGCCCCAGACTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHRVQCS*PQTRTP
Trigger: AGGAGTTCTAGTCTGGGGTCAAGAACACTGGACCCG...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTTGGGCTTTGGGACCTTaGCATGGCCTTTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPWALGP*HGLCRL
Trigger: CAGCCTACAAAGGCCATGTCAAGGTCCCAAAGCCCA...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGACTTGGCTCGCAATaGCACCAGGCTGGGTGGATT +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITRLGSQ*HQAGWI
Trigger: AATCCACCCAGCCTGGTGTCATTGCGAGCCAAGTCT...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCGCTATTCGATGGAGTTaGGTGTTTGGTGGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCAIRWS*VFGGVR
Trigger: TCGGACTCCACCAAACACTCAACTCCATCGAATAGC...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATTCCATCTGCAGGCTGTaGTCCAGGTCCCGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNSICRL*SRSRCT
Trigger: TGTGCAGCGGGACCTGGAGCACAGCCTGCAGATGGA...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACACAGAAGTTCTCGCTGTaGTCACGAAGCTTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITQKFSL*SRSLRS
Trigger: GGAGCGCAAGCTTCGTGAGCACAGCGAGAACTTCTG...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTCGCTTTCCATTTGCTTaGAGAAGTTCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLRFPFA*RSSRCA
Trigger: AGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCG...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATTGTAGGCTGTTCCGATaGCTCGCTGCACGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNCRLFR*LAARPR
Trigger: GCGTGGACGTGCAGCGAGGCATCGGAACAGCCTACA...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGCTGGTGCGCAGCATCTaGTTCTTGCTGTTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVLVRSI*FLLLSE
Trigger: CTCCGACAACAGCAAGAAGCAGATGCTGCGCACCAG...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCCTTTTGCTCCTGGTaGGCAGCATCTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITAFCSW*AASASC
Trigger: GCAAGAAGCAGATGCTGCGCACCAGGAGCAAAAGGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCATCCGTGACATGGGATaGGAACTGGAATCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCIRDMG*ELESLF
Trigger: GAAGAGCGATTCCAGTTCCCATCCCATGTCACGGAT...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATTTCACTTCTAGCACATaGGAGGCCTCACGTCTGACC +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNFTSST*EASRLT
Trigger: GGTCAGACGTGAGGCCTCCCATGTGCTAGAAGTGAA...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCCCACTGACTCCTTCTTaGCTGCCAGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSPLTPS*LPDPAA
Trigger: AGCTGCAGGATCTGGCAGCCAAGAAGGAGTCAGTGG...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATTCCTTGGACAACACTaGAGGGCCCGCTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITFLGQH*RARSVL
Trigger: CAAGACTGAGCGGGCCCTCCAGTGTTGTCCAAGGAA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCTCCTTCATGTGCAGATaGAACAGCATCGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVSFMCR*NSIASQ
Trigger: CTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGA...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCAGCCGTGGAAGCGAATaGAAAACAGCACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVSRGSE*KTAQLT
Trigger: AGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCT...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTCACTCAGTGCCGACTTaGGGAAGTGCACGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPHSVPT*GSARPE
Trigger: TTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTG...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAAGGGCTAGGCGGTGCTaGGCCACTCAGTGCCGACTT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVRARRC*ATQCRL
Trigger: AAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCT...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTATAGGTCTCCACGAGTaGCTCCGCATAAAACGGCGT +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPIGLHE*LRIKRR
Trigger: ACGCCGTTTTATGCGGAGTCACTCGTGGAGACCTAT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCTTCAGATACATCCGTaGCATGGGATGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNLQIHP*HGMGTG
Trigger: TCCAGTTCCCATCCCATGTCACGGATGTATCTGAAG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGATGATTTCCGCAATCTaGGCTTCCCAGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVMISAI*ASQWAT
Trigger: AGTGGCCCACTGGGAAGCTCAGATTGCGGAAATCAT...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGGTTTCCGGAAGCTTaGTGTCAAAGCTGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSWFPEA*CQSCLP
Trigger: CGGAAGGCAGCTTTGACATCAAGCTTCCGGAAACCA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATACTCAGGCCCGTATTTaGCCATGCCGTCCTCCATCG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNTQARI*PCRPPS
Trigger: CGATGGAGGACGGCATGGGCAAATACGGGCCTGAGT...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTCCTCTATTCCATTCTaGCCCAGCCGGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWASSIPF*PSRRSL
Trigger: TAGAGAACGCCGGCTGGGGCAGAATGGAATAGAGGA...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGAGGCTTCAACCAGTTaGTTGTGCAGCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVEASTS*LCSSSF
Trigger: GAAGGAGGAGCTGCACAAGCAACTGGTTGAAGCCTC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGACAGACGACTGCATATaGGCGCTGCCATCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVTDDCI*ALPSLL
Trigger: AAGAAGGGATGGCAGCGCGCATATGCAGTCGTCTGT...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCCATACAGGAAGAGCTTaGAGTCACAGACGACTGCAT +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVHTGRA*SHRRLH
Trigger: ATGCAGTCGTCTGTGACTGCAAGCTCTTCCTGTATG...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCGACTGCAATCCTGTCTaGATCCACGATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWADCNPV*IHDGSC
Trigger: ACAGCTGCCATCGTGGATGCAGACAGGATTGCAGTC...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACCAGGCACTGCACGCTaGCGGGAGCCACAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVPGTAR*REPQSH
Trigger: ATGAGATTGTGGCTCCCGGCAGCGTGCAGTGCCTGG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCTGCAGATCAGTCTCTaGATGAGGTCCTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNLQISL*MRSFAS
Trigger: AGAAGCGAAGGACCTCATCCAGAGACTGATCTGCAG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGACATGTCCAGCTTCTaGCTGCGGCGCACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVDMSSF*LRRTFH
Trigger: GTGGAAGGTGCGCCGCAGCCAGAAGCTGGACATGTC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGAAGTAGATCAAGCGTaGAGGCTCGCAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGEVDQA*RLAVEE
Trigger: CTCCTCAACTGCGAGCCTCCACGCTTGATCTACTTC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCCAGTCTCTCTTCCTCTaGGACCTTGAAGACGAACCG +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAQSLFL*DLEDEP
Trigger: CGGTTCGTCTTCAAGGTCCCAGAGGAAGAGAGACTG...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTATCGCCTGGGCCCATGTaGGCCACGTGGTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVSPGPM*ATWLKL
Trigger: CAACTTCAACCACGTGGCCCACATGGGCCCAGGCGA...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGTGGGCCGCTGGGGTTaGAGCTATTCGATGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNVGRWG*SYSMEL
Trigger: CAACTCCATCGAATAGCTCCAACCCCAGCGGCCCAC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTGGAACATGCACGACCTaGTTCCTCAGCCGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPGTCTT*FLSRFL
Trigger: TAAAAACCGGCTGAGGAATCAGGTCGTGCATGTTCC...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCGAGCCACAATCTCATTaGACTTTCTGTGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCEPQSH*TFCGMA
Trigger: AGCCATTCCACAGAAAGTTCAATGAGATTGTGGCTC...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTATCAAAAGACTGTTGTaGGAGGAACGCAAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPIKRLL*EERKRG
Trigger: CCCTCGCTTGCGTTCCTCTCACAACAGTCTTTTGAT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATCTTCCTCTGGGACCTTaGAGACGAACCGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNLPLGP*RRTAFC
Trigger: GCAAAAGGCGGTTCGTCTTCAAGGTCCCAGAGGAAG...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTTTGGGTGGGTCTACGTaGTCATACGGGCTACTAATC +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPLGGST*SYGLLI
Trigger: GATTAGTAGCCCGTATGATCACGTAGACCCACCCAA...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATAGCTCGCTTTCCATTTaGTTGCAGAAGTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNSSLSI*LQKFSL
Trigger: CAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCT...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACGAGCCATGTCCTCCTaGTGCTCTGATGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVRAMSS*CSDAAT
Trigger: TGTGGCTGCATCAGAGCAGCAGGAGGACATGGCTCG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAACTGCATATGCGCGCTaGCATCCCTTCTTCACCCCC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVTAYAR*HPFFTP
Trigger: GGGGGTGAAGAAGGGATGGCAGCGCGCATATGCAGT...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGGGCCACATGAGCTCCTaGGCGCGTGCCCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGGHMSS*ARALRP
Trigger: AGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCC...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATAGACGAACCGCCTTTTaGTCCTGGTGCGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNRRTAF*SWCAAS
Trigger: AGATGCTGCGCACCAGGAGCAAAAGGCGGTTCGTCT...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACCAGCTGTGTAAATaGTTTAGCCCACTCGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNHQLCK*FSPLEE
Trigger: TTCCTCGAGTGGGCTAAACCATTTACACAGCTGGTG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACACCCCCGTGGGCTTTaGGACCTTGACATGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVHPRGL*DLDMAF
Trigger: AAAGGCCATGTCAAGGTCCCAAAGCCCACGGGGGTG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGGAGCAAGCTCGATCTaGTGTACCTTCTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNGASSI*CTFLQS
Trigger: TGACTGTAAGAAGGTACACCAGATCGAGCTTGCTCC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTTACGATCTTCTCCCTaGGAGCAAGCTCGATCTGGT +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSLRSSP*EQARSG
Trigger: ACCAGATCGAGCTTGCTCCCAGGGAGAAGATCGTAA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATGAGTTGAGTGTTTGGTaGAGTCCGAATCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNELSVW*SPNQAL
Trigger: AAGAGCCTGATTCGGACTCCACCAAACACTCAACTC...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTGCTCTTCATGGTTCATaGTCTTCCCATAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPALHGS*SSHRSP
Trigger: TGGAGACCTATGGGAAGATCATGAACCATGAAGAGC...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATTCTTTATCTCGGTTTaGATTGCTGAGGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITFFISV*IAEGPR
Trigger: TCTCGGGCCCTCAGCAATTCAAACCGAGATAAAGAA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTCCAGCTGTCTATTTTaGGCTGTGAGTTTATCCACA +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCSSCLF*AVSLST
Trigger: TGTGGATAAACTCACAGCTCAAAATAGACAGCTGGA...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGTACAAAGGGTGAGGTaGAATCCACGCGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVVQRVR*NPRAGD
Trigger: ATCCCCTGCGCGTGGATTTCACCTCACCCTTTGTAC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGGAGGACTGCACAGTaGCATCATCATTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHRRTAQ*HHHSSS
Trigger: TGAAGATGAATGATGATGGCACTGTGCAGTCCTCCG...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAATCAAGATTTCTTTCTaGAGGGCCAGCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITIKISF*RASWWL
Trigger: AAGCCACCAGCTGGCCCTGCAGAAAGAAATCTTGAT...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGCAGCATCTGCTTCTTaGTGTTGTCGGAGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVAASAS*CCRRCP
Trigger: CGGACACCTCCGACAACAGCAAGAAGCAGATGCTGC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATACAGATGTGGTCTACTaGCACGAACAATGCGGCATA +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHTDVVY*HEQCGI
Trigger: TATGCCGCATTGTTCGTGGCAGTAGACCACATCTGT...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATATCGCCTCACAGCTGTaGAGACGAACAGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNIASQL*RRTDVV
Trigger: GACCACATCTGTTCGTCTGCACAGCTGTGAGGCGAT...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGATGGATGGAGTCAATaGCCAGCACCATTTCACCAA +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGDGWSQ*PAPFHQ
Trigger: TTGGTGAAATGGTGCTGGCCATTGACTCCATCCATC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCAATGAAGCTGATGGATaGAGTCAATGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSNEADG*SQWPAP
Trigger: TGGTGCTGGCCATTGACTCCATCCATCAGCTTCATT...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCACATGGGATGGGAACTaGAATCGCTCTTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWATWDGN*NRSSWF
Trigger: GAACCATGAAGAGCGATTCCAGTTCCCATCCCATGT...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGCTCTTCGGTCATCTTaGAAGCAAGAGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHALRSS*KQELEG
Trigger: ACCTTCAAGCTCTTGCTTCCAAGATGACCGAAGAGC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGGAATCCTGAAAATCTaGAAGTTTGAGCCCAGTATC +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVGILKI*KFEPSI
Trigger: GATACTGGGCTCAAACTTCCAGATTTTCAGGATTCC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCAATGACACCAGGCTaGGTGGATTTTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNAMTPG*VDFPSG
Trigger: GCCTGAAGGAAAATCCACCCAGCCTGGTGTCATTGC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACACAAGCGAGGGGTCATTaGGATTTACCAGGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITQARGH*DLPGLE
Trigger: CTCTAAACCTGGTAAATCCCAATGACCCCTCGCTTG...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACCCATGTGGGCCACGTaGTTGAAGTTGGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVPMWAT*LKLVGL
Trigger: CAACCCAACCAACTTCAACCACGTGGCCCACATGGG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATAGGAGGCAGAAGCCGTaGAAGCGAATGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNRRQKP*KRMENS
Trigger: GCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATTCAAAGTCTTCTCGATaGAGCTGCATTTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNSKSSR*SCISFT
Trigger: GGTGAAAGAAATGCAGCTTCATCGAGAAGACTTTGA...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAATTCATCTTCAAACATaGTCCAAAGTCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITIHLQT*SKVSQA
Trigger: CGCCTGGCTGACTTTGGATCATGTTTGAAGATGAAT...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATTCTTGCTCACTAGCTaGGCTGGTTCTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITFLLTS*AGSKCQ
Trigger: CTGACATTTAGAACCAGCTCAGCTAGTGAGCAAGAA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATCCGAGAACTTGCTCTTaGAGTAGATCAAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNPRTCS*SRSSVE
Trigger: CTCCACGCTTGATCTACTTCAAGAGCAAGTTCTCGG...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGGAAAACAGCACAGCTaGCTTCACAGTAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGGKQHS*LHSSRY
Trigger: GTATCTACTACTGTGAAGTCAGCTGTGCTGTTTTCC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGGCTCCCCGGCCTCCTTaGTTCACCTTGAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGAPRPP*FTLRAS
Trigger: GGAGGCCCTCAAGGTGAAGCAAGGAGGCCGGGGAGC...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGATACATCCGTGACATaGGATGGGAACTGGAATCGC +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNDTSVT*DGNWNR
Trigger: GCGATTCCAGTTCCCATCCCATGTCACGGATGTATC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATTTGAGTTCCTTGGCCTaGGATTTCAACCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNLSSLA*DFNRSE
Trigger: CTCAGAGCGGTTGAAATCCCAGGCCAAGGAACTCAA...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACTGAGATCCAAGACTTaGCTCGCAATGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVLRSKT*LAMTPG
Trigger: GCCTGGTGTCATTGCGAGCCAAGTCTTGGATCTCAG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGGTTGGATATCATTTTaGATCTCAATTCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVGWISF*ISILGL
Trigger: GAGACCCAGAATTGAGATCCAAAATGATATCCAACC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGTCAAAGTCCTGGTCTaGATCAGACATACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVVKVLV*IRHTSQ
Trigger: CTGAGAAGTATGTCTGATCCAGACCAGGACTTTGAC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGATTCTACATTTCCTTaGACAACACTGGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ASPHSCADEQMWSTATNNDSTFP*TTLEGP
Trigger: CGGGCCCTCCAGTGTTGTCCAAGGAAATGTAGAATC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTCCACATAGTAATCCATaGCTAAGTACAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPPHSNP*LSTGGS
Trigger: AGAACCACCTGTACTTAGTCATGGATTACTATGTGG...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCCAAGAGGAGCAGTGTTaGAATACTCAAAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCQEEQC*NTQKWN
Trigger: ATTCCATTTTTGAGTATTTCAACACTGCTCCTCTTG...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTACTCAGCCGGTTTTTATaGAGGATGGACTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVLSRFL*RMDWSP
Trigger: AGGACTCCAGTCCATCCTTCATAAAAACCGGCTGAG...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGATGTGTCAGAGGGACTaGTCACATCAGGAATATAAG +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVMCQRD*SHQEYK
Trigger: CTTATATTCCTGATGTGAGCAGTCCCTCTGACACAT...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATTACTGCCACGAACAATaGGGCATAAAACTGATCAAT +
Preference number: 4 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNYCHEQ*GIKLIN
Trigger: ATTGATCAGTTTTATGCCGCATTGTTCGTGGCAGTA...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTCCTCCGCAGGCCGATaGTCTGCACCCACTCCATGG +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGSSAGR*SAPTPW
Trigger: CCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTTTGGATCTCAATTCTaGGTCTCTAAGCATCTCTCG +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSFGSQF*VSKHLS
Trigger: CGAGAGATGCTTAGAGACCCAGAATTGAGATCCAAA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCAGTATTCTTCATTTTaGCAACAGCAACCTCACCAA +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHQYSSF*QQQPHQ
Trigger: TTGGTGAGGTTGCTGTTGTCAAAATGAAGAATACTG...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATGTTAATGTGTTGGACTaGATTATGCTCTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHVNVLD*IMLFRE
Trigger: CTCTCTGAAGAGCATAATGCAGTCCAACACATTAAC...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTTTTATTGTACCTACTaGCTCCTCCATCTCGTTATG +
Preference number: 4 (lower is better)
Translates to: DRLYGGPSCADGTASPHSFYCTY*LLHLVM
Trigger: CATAACGAGATGGAGGAGGCAGTAGGTACAATAAAA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGGAGTCCTCACGCTCTTaGCGAAGCGCCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGESSRS*RSATVS
Trigger: GGACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTC...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGTGGTTGAAGTTGGTTaGGTTGGATATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVVVEVG*VGYHFG
Trigger: TCCAAAATGATATCCAACCCAACCAACTTCAACCAC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTCTTTGTCAAAGTCCTaGTCTGGATCAGACATACTT +
Preference number: 4 (lower is better)
Translates to: TQNELNAHRDAGCHWSWASLSKS*SGSDIL
Trigger: AAGTATGTCTGATCCAGACCAGGACTTTGACAAAGA...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGTCCATATCTACAAAGTaGTTCTACATTTCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVSISTK*FYISLD
Trigger: GTCCAAGGAAATGTAGAATCACTTTGTAGATATGGA...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTCCTTGTCTCGCAGCTaGCGGGACACCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGSLSRS*RDTFCF
Trigger: GAAGCAGAAGGTGTCCCGGCAGCTGCGAGACAAGGA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTGTGCTCACGAAGCTTaGGCTCCTTGGAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGCAHEA*APWRPQ
Trigger: CTGAGGCCTCCAAGGAGCGCAAGCTTCGTGAGCACA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTATGTCTTCAAATTTGCTaGGCAGGGTCAGTAAATCAC +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVCLQIC*AGSVNH
Trigger: GTGATTTACTGACCCTGCTCAGCAAATTTGAAGACA...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR GCA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAAAATGTCAGGTCATGTaGAAGAGGAGCAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RRQKPWKRMENSTADFTVKCQVM*KRSSVE
Trigger: TTCAACACTGCTCCTCTTGCACATGACCTGACATTT...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGACCGCCTTTTGCTCCTaGTGCGCAGCATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGTAFCS*CAASAS
Trigger: AGAAGCAGATGCTGCGCACCAGGAGCAAAAGGCGGT...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR TCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTCAGCCAGGCGGATATaGCCATTCACGTCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGSARRI*PFTSKR
Trigger: CCTTTTGGACGTGAATGGTCATATCCGCCTGGCTGA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTCTGCACCCACTCCATaGTGCGCACATCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGSAPTP*CAHQRR
Trigger: ACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGACGTACAGTCCCATGTaGCTGAAGCAAAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGTYSPM*LKQSRY
Trigger: GTACCTGCTTTGCTTCAGCCACATGGGACTGTACGT...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGTTGTCCATGACTAGGTaGTCAGCAGGACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGLSMTR*SAGLLQ
Trigger: CTGCAGAAGTCCTGCTGACCACCTAGTCATGGACAA...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CCA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGGGTTTTTATGAAGGATaGACTGGAGTCCTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGGFYEG*TGVLLE
Trigger: TTCTAGAAGGACTCCAGTCCATCCTTCATAAAAACC...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CGGCCTAGGCCGACATCTTGGGCTCCGTCCCGACGGCGCAGAGTCTaGGGCGCCGGGCCCCGCGGGTCCATGGGCCGCTCTCCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: RPRPTSWAPSRRRRV*GAGPRGSMGRSPPL
Trigger: GAGGGGAGGAGAGCGGCCCATGGACCCGCGGGGCCCGGCGCCCCAGACTCTGCGCCGTCGGGACGGAGCCCAAGATGTCGGCCTAGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp CGTGGGTGGGGCTGCAACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTACA +
Preference number: 5 (lower is better)
Translates to: RGWGCNYRRQEPQAT*APARVPSGLAGPRT
Trigger: TGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCCCCACCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp ACGCTCAGGGCGCTCTCGTTGCGCCAGGGCCCGTCCAGGAGCAGCTaGTCCAGCTTCTTGAGCCGCACCTTGGCCGACATGGTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: TLRALSLRQGPSRSS*SSFLSRTLADMVPR
Trigger: GCGCGGCACCATGTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCCTGGCGCAACGAGAGCGCCCTGAGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCGCTCCCCGGCCTCCTaGCTTCACCTTGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLRSPAS*LHLEGL
Trigger: GAGGCCCTCAAGGTGAAGCAAGGAGGCCGGGGAGCG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGTGTTGGCAGGGCCCCATATGCCCTCTCGGGTTGTCAGGGGTGGGAGACAGGCTCCACGCGCAGGGGATaGCTGTGCCGTGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GVGRAPYALSGCQGWETGSTRRG*LCRGPG
Trigger: CCCCGGCCCACGGCACAGCAATCCCCTGCGCGTGGA...GCCTGTCTCCCACCCCTGACAACCCGAGAGGGCATATGGGGCCCTGCCAACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp GGGCTGCAACTACAGGCGACAGGAGCCGCAGGCCACATGAGCTCCTaGGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTACAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: GLQLQATGAAGHMSS*ARALRPCGSTYSPM
Trigger: CATGGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp TGGGAAGCAGGCCAGAGAGCGTACTGCCGGTCTCGGGGTCCCTCCTaGGACAGTGGCTCCAGCCACGGTGTCCCTGCCTTCCGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: WEAGQRAYCRSRGPS*DSGSSHGVPAFRAP
Trigger: AGGAGCCCGGAAGGCAGGGACACCGTGGCTGGAGCCACTGTCCCAGGAGGGACCCCGAGACCGGCAGTACGCTCTCTGGCCTGCTTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS GCA 90 bp CAGTGGCTCCAGCCACGGTGTCCCTGCCTTCCGGGCTCCTCCTCGTaGACCACCCCGAGGCTGCTGAGGCTGAGCCATCCCTCATCCCTT +
Preference number: 5 (lower is better)
Translates to: QWLQPRCPCLPGSSS*TTPRLLRLSHPSSL
Trigger: AAGGGATGAGGGATGGCTCAGCCTCAGCAGCCTCGGGGTGGTGCACGAGGAGGAGCCCGGAAGGCAGGGACACCGTGGCTGGAGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CCA 90 bp GCTCCGATCCACCTGATGAGGGCCACGAGATGTAGGGCTTGTTCCTaGATGGAGGCTGGCGAGCCAGGTTGGTGGGAGCGGGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: APIHLMRATRCRACS*MEAGEPGWWERGPA
Trigger: GGCCGGGCCCCGCTCCCACCAACCTGGCTCGCCAGCCTCCATCCAGGAACAAGCCCTACATCTCGTGGCCCTCATCAGGTGGATCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGCCTCCTTGCTTCACCTaGAGGGCCTCCAGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLPPCFT*RASSSL
Trigger: AAGCGAGCTGGAGGCCCTCAAGGTGAAGCAAGGAGG...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp CGAGGAACTCGGCCACGTACTTGTCGCGGCGCAGGGCCGAGTGGCTaGACTCGGTGTACAGGCAGACGAGCACGTCGAGCAGCGTTTCCA +
Preference number: 5 (lower is better)
Translates to: RGTRPRTCRGAGPSG*TRCTGRRARRAAFP
Trigger: TGGAAACGCTGCTCGACGTGCTCGTCTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTTCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CACTCGAGGAACTCGGCCACGTACTTGTCGCGGCGCAGGGCCGAGTaGCTGCACTCGGTGTACAGGCAGACGAGCACGTCGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: HSRNSATYLSRRRAE*LHSVYRQTSTSSSV
Trigger: AACGCTGCTCGACGTGCTCGTCTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTTCCTCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CAGTGGCTCAGGAACTCACCTGCCCTCGGGCCGGAGGCCAAGCCTTaGCACTTGAACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QWLRNSPALGPEAKP*HLNKCRGGSTALSW
Trigger: CCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGAGTTCCTGAGCCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS-3UTR CAA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGCGTGCCCTCCGGCCTaGCGGGTCCACGTACAGTCC +
Preference number: 5 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVACPPA*RVHVQS
Trigger: GGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp TGGTGCGCACATCAAAGACGTCCACGCCATACTCGCTGTACACCGTaGCGTGGGTGGGGCTGCAACCTAGCGCAGACGGAGCAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: WCAHQRRPRHTRCTP*RGWGCNLAQTEQGG
Trigger: CCCGCCCTGCTCCGTCTGCGCTAGGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTTTGATGTGCGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CCA 90 bp TGCTTCTCCAGCCCCCGCAGCCGCTGCGTGGAGTCCTCACGCTCTTaGCGAAGCGCCACTGTGTCCTCAAGCTGTCGCTCGAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CFSSPRSRCVESSRS*RSATVSSSCRSSLF
Trigger: AAACAGGCTCGAGCGACAGCTTGAGGACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTCCACGCAGCGGCTGCGGGGGCTGGAGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CGCACATCAAAGACGTCCACGCCATACTCGCTGTACACCGTGACGTaGGTGGGGCTGCAACCTAGCGCAGACGGAGCAGGGCGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RTSKTSTPYSLYTVT*VGLQPSADGAGRGE
Trigger: CTCACCCCGCCCTGCTCCGTCTGCGCTAGGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTTTGATGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCCTCAGGGCGCTCTCGTaGCGCCAGGGCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGLRALS*RQGPSR
Trigger: CCTGGACGGGCCCTGGCGCAACGAGAGCGCCCTGAG...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp TCAGCAGGCAGAACCCAGAAGGGTAGCCCACACAGAGCCTGTCCCTaGGCACCGCCAGGCACTGCACGCTGCCGGGAGCCACAATCTCAT +
Preference number: 5 (lower is better)
Translates to: SAGRTQKGSPHRACP*APPGTARCREPQSH
Trigger: ATGAGATTGTGGCTCCCGGCAGCGTGCAGTGCCTGGCGGTGCTCAGGGACAGGCTCTGTGTGGGCTACCCTTCTGGGTTCTGCCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS TCA 90 bp TCAGGAACTCACCTGCCCTCGGGCCGGAGGCCAAGCCTTGGCACTTaGACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCTGGTTCACGT +
Preference number: 5 (lower is better)
Translates to: SGTHLPSGRRPSLGT*TSAEAAALPSAGSR
Trigger: ACGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGAGTTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 90 bp TCACCTGCCCTCGGGCCGGAGGCCAAGCCTTGGCACTTGAACAAGTaGAGAGGCGGCAGCACTGCCCTCAGCTGGTTCACGTCACCAAAG +
Preference number: 5 (lower is better)
Translates to: SPALGPEAKPWHLNK*RGGSTALSWFTSPK
Trigger: CTTTGGTGACGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 90 bp ATATACATACTACAGGCGACAGGAGCCGCAGGCCACATGAGCTCCTaGGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTACAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: IYILQATGAAGHMSS*ARALRPCGSTYSPM
Trigger: CATGGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTATGTATAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559245.1
CDS CCA 90 bp TGCGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTACAGTCCCATGTaGCTGAAGCAAAGCAGGTACTCCTCGCTTTCGAGCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: CARALRPCGSTYSPM*LKQSRYSSLSSSTA
Trigger: TGCTGTGGAGCTCGAAAGCGAGGAGTACCTGCTTTGCTTCAGCCACATGGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS CCA 90 bp AGCACGCGGTCTGCAAAGCAACGAGGGGTGTCAGTCTGTGTTCACTaGGAAGCAGGCCAGAGAGCGTACTGCCGGTCTCGGGGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: STRSAKQRGVSVCVH*EAGQRAYCRSRGPS
Trigger: GGAGGGACCCCGAGACCGGCAGTACGCTCTCTGGCCTGCTTCCCAGTGAACACAGACTGACACCCCTCGTTGCTTTGCAGACCGCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS TCA 90 bp CTCATCCCTTCCTCTCCCAAGCCCCGTGCAAGTGCCAAGGGCTGCTaGGGAGGCACTTGCACCCTGCTGTCCCACGGGCACCATTTCTGT +
Preference number: 5 (lower is better)
Translates to: LIPSSPKPRASAKGC*GGTCTLLSHGHHFC
Trigger: ACAGAAATGGTGCCCGTGGGACAGCAGGGTGCAAGTGCCTCCTCAGCAGCCCTTGGCACTTGCACGGGGCTTGGGAGAGGAAGGGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CCA 90 bp ACGCCCAGAGGCCTCTTGGACTGCTCGGGAGGTATTGGGCACACCTaGGGGGCACCGTCTTTGCAGGACACGTGGCAAGCAAAGGAACAC +
Preference number: 5 (lower is better)
Translates to: TPRGLLDCSGGIGHT*GAPSLQDTWQAKEH
Trigger: GTGTTCCTTTGCTTGCCACGTGTCCTGCAAAGACGGTGCCCCCCAGGTGTGCCCAATACCTCCCGAGCAGTCCAAGAGGCCTCTGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559043.1
ENST00000634889.1
CDS-3UTR CAA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTAACTCGGCCACGTACTaGTCGCGGCGCAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPNSATY*SRRRAE
Trigger: CTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTT...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCGAGGTGTCCGGCACGTaGAGAACCGCTCCCGAGAAC +
Preference number: 5 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCEVSGT*RTAPEN
Trigger: GTTCTCGGGAGCGGTTCTCAACGTGCCGGACACCTC...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATAGGGCCCGCTCAGTCTaGGCACTGACGCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHRARSV*ALTLEA
Trigger: GGCCTCCAGCGTCAGTGCCAAGACTGAGCGGGCCCT...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp CGCGTGCCCTCCGGCCTTGCGGGTCCACGTACAGTCCCATGTGGCTaGAGCAAAGCAGGTACTCCTCGCTTTCGAGCTCCACAGCACAAA +
Preference number: 5 (lower is better)
Translates to: RVPSGLAGPRTVPCG*SKAGTPRFRAPQHK
Trigger: TTTGTGCTGTGGAGCTCGAAAGCGAGGAGTACCTGCTTTGCTTCAGCCACATGGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS TCA 90 bp CAGAAAACATATACATACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTACA +
Preference number: 5 (lower is better)
Translates to: QKTYTYYRRQEPQAT*APARVPSGLAGPRT
Trigger: TGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTATGTATATGTTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559245.1
CDS-3UTR CAA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTTCTTGAGCCGCACCTaGGCCGACATGGTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: DRLYGGPSCADGTASPHSFLSRT*ADMVPR
Trigger: GCGCGGCACCATGTCGGCCAAGGTGCGGCTCAAGAA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCTCCTGGACAAGCTGCTaGGCCCGGATCTCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGSWTSC*ARISAS
Trigger: GGAGGCGGAGATCCGGGCCAAGCAGCTTGTCCAGGA...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCGTGGAGGCTCGCAGTaGAGGAGGTTGAGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNRGGSQ*RRLRVP
Trigger: AGGCACCCTCAACCTCCTCAACTGCGAGCCTCCACG...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCGGTGGGCCGCTGGGGTaGGAGCTATTCGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVGGPLG*ELFDGV
Trigger: AACTCCATCGAATAGCTCCAACCCCAGCGGCCCACC...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp CTAAGTACAGGTGGTTCTCGTCCTGAAAGGCGTAGTGCAGCGCGGTaGTCCACTGGCAGTCGCCGTTCACCAGCACATCGCGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LSTGGSRPERRSAAR*STGSRRSPAHRAPL
Trigger: GAGAGGAGCGCGATGTGCTGGTGAACGGCGACTGCCAGTGGATCACCGCGCTGCACTACGCCTTTCAGGACGAGAACCACCTGTACTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000558321.5
ENST00000561271.1
CDS-3UTR CAA 90 bp CCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAAGCCTGGAGTCCTCACGCTCTaGGCGAAGCGCCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: PGPSCGQAVSAATVNHKPGVLTL*AKRHCV
Trigger: GACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTCC...AGGCTTGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCTGAGGAAGTGGTGTaGGCAGGGCCCCATATGCCC +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITAEEVV*AGPHMP
Trigger: GGGCATATGGGGCCCTGCCAACACCACTTCCTCAGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp GGTCATTGGGATTTACCAGGTTTAGAGGCTGCCCGTCCCCCTGGATaGTCAGCAGGCAGAACCCAGAAGGGTAGCCCACACAGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: GHWDLPGLEAARPPG*SAGRTQKGSPHRAC
Trigger: ACAGGCTCTGTGTGGGCTACCCTTCTGGGTTCTGCCTGCTGAGCATCCAGGGGGACGGGCAGCCTCTAAACCTGGTAAATCCCAATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS GCA 90 bp AGTCTCCTGACGTTTCTGCTCCTAGACCCAGGGCTGTGGAGCGGGTaGATGCCAGGATACCTTTGCCCTTCCTCGCTGGGAAGACTGAAG +
Preference number: 5 (lower is better)
Translates to: SLLTFLLLDPGLWSG*MPGYLCPSSLGRLK
Trigger: CTTCAGTCTTCCCAGCGAGGAAGGGCAAAGGTATCCTGGCATGCACCCGCTCCACAGCCCTGGGTCTAGGAGCAGAAACGTCAGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558867.1
CDS CCA 90 bp GAGGAGGTTGAGGGTGCCTTCAGAGTTCAGGGGCCTTATCTGGATTaGAAACCAGGGAGGGACAGTAAGCGCGGCCACGCACAGACTGCA +
Preference number: 5 (lower is better)
Translates to: EEVEGAFRVQGPYLD*KPGRDSKRGHAQTA
Trigger: TGCAGTCTGTGCGTGGCCGCGCTTACTGTCCCTCCCTGGTTTCCAATCCAGATAAGGCCCCTGAACTCTGAAGGCACCCTCAACCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCGGTCTGGGTGGACTCTaGCAGCTTCCTGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGGLGGL*QLPAQL
Trigger: GAGCTGAGCAGGAAGCTGCAAGAGTCCACCCAGACC...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCCTTGGAAGCAAGAGCTaGAAGGTAACCCCGGGCATC +
Preference number: 5 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVLGSKS*KVTPGI
Trigger: GATGCCCGGGGTTACCTTCAAGCTCTTGCTTCCAAG...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCACGCCCAGAGGCCTCTaGGACTGCTCGGGAGGTATT +
Preference number: 5 (lower is better)
Translates to: DRLYGGPSCADGTASPHSTPRGL*DCSGGI
Trigger: AATACCTCCCGAGCAGTCCAAGAGGCCTCTGGGCGT...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCATGACGGGTTTCTGCTCGCAGTTGAGGAGGTaGAGGGTGCCTTCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: AVSPDVCFRSSRVMTGFCSQLRR*RVPSEF
Trigger: GAACTCTGAAGGCACCCTCAACCTCCTCAACTGCGA...GCAGAAACCCGTCATGACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTGATGGAGTTGAGTGTTaGGTGGAGTCCGAATCAGGC +
Preference number: 5 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLDGVEC*VESESG
Trigger: GCCTGATTCGGACTCCACCAAACACTCAACTCCATC...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp CGGCCTCCTTGCTTCACCTTGAGGGCCTCCAGCTCGCTTTCCATTTaGTTGCAGAAGTTCTCGCTGTGCTCACGAAGCTTGCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RPPCFTLRASSSLSI*LQKFSLCSRSLRSL
Trigger: CAAGGAGCGCAAGCTTCGTGAGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTGGAGGCCCTCAAGGTGAAGCAAGGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp GGAGGCCAAGCCTTGGCACTTGAACAAGTGCAGAGGCGGCAGCACTaGCCTCAGCTGGTTCACGTCACCAAAGACTTCATGTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: GGQALALEQVQRRQH*PQLVHVTKDFMFPL
Trigger: GAGTGGGAACATGAAGTCTTTGGTGACGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CCA 90 bp CAGTTGAGGAGGTTGAGGGTGCCTTCAGAGTTCAGGGGCCTTATCTaGATTGGAAACCAGGGAGGGACAGTAAGCGCGGCCACGCACAGA +
Preference number: 5 (lower is better)
Translates to: QLRRLRVPSEFRGLI*IGNQGGTVSAATHR
Trigger: TCTGTGCGTGGCCGCGCTTACTGTCCCTCCCTGGTTTCCAATCCAGATAAGGCCCCTGAACTCTGAAGGCACCCTCAACCTCCTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS-3UTR CAA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATAGCTGCTCCAGCTTCTaGAGCCGCACCTTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: ASPHSCADEQMWSTATNNSCSSF*SRTLAD
Trigger: GTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGCT...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GAGGGCAGTGGGGTGGCAGGGCTAGGCGGTGCTGGGCCACTCAGTGCCGACTTGTCAGTATTCTTCATTTaGACAACAGCAACCTCACCA +
Preference number: 5 (lower is better)
Translates to: EGSGVAGLGGAGPLSADLSVFFI*TTATSP
Trigger: TGGTGAGGTTGCTGTTGTCAAAATGAAGAATACTGA...CAAGTCGGCACTGAGTGGCCCAGCACCGCCTAGCCCTGCCACCCCACTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTTCGCTTTCCATTTGCTaGCAGAAGTTCTCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLSLSIC*QKFSLC
Trigger: GCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGA...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCATCTGCTTCTTGCTGTaGTCGGAGGTGTCCGGCACG +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGICFLL*SEVSGT
Trigger: CGTGCCGGACACCTCCGACAACAGCAAGAAGCAGAT...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACACGCAGCATCTGCTTCTaGCTGTTGTCGGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITRSICF*LLSEVS
Trigger: GGACACCTCCGACAACAGCAAGAAGCAGATGCTGCG...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 90 bp GTTGGGGCTCGGTGGGCCGCTGGGGTTGGAGCTATTCGATGGAGTTaGGTGTTTGGTGGAGTCCGAATCAGGCTCTTTGTCAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VGARWAAGVGAIRWS*VFGGVRIRLFVKVL
Trigger: CAGGACTTTGACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCAGCGGCCCACCGAGCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 90 bp TCATACAGGAAGAGCTTGCAGTCACAGACGACTGCATATGCGCGCTaGCATCCCTTCTTCACCCCCGTGGGCTTTGGGACCTTGACATGG +
Preference number: 5 (lower is better)
Translates to: SYRKSLQSQTTAYAR*HPFFTPVGFGTLTW
Trigger: CCATGTCAAGGTCCCAAAGCCCACGGGGGTGAAGAAGGGATGGCAGCGCGCATATGCAGTCGTCTGTGACTGCAAGCTCTTCCTGTATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS GCA 90 bp TCCTTCAGGCAGATCATACAGGAAGAGCTTGCAGTCACAGACGACTaGATATGCGCGCTGCCATCCCTTCTTCACCCCCGTGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SFRQIIQEELAVTDD*ICALPSLLHPRGLW
Trigger: CCAAAGCCCACGGGGGTGAAGAAGGGATGGCAGCGCGCATATGCAGTCGTCTGTGACTGCAAGCTCTTCCTGTATGATCTGCCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS CCA 90 bp GCACATGGTGGTTCCGGCCACAGAGGAGGATTACGATCTTCTCCCTaGGAGCAAGCTCGATCTGGTGTACCTTCTTACAGTCAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: AHGGSGHRGGLRSSP*EQARSGVPSYSQRH
Trigger: GTGCCGCTGACTGTAAGAAGGTACACCAGATCGAGCTTGCTCCCAGGGAGAAGATCGTAATCCTCCTCTGTGGCCGGAACCACCATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CCA 90 bp TGGGTCTCTAAGCATCTCTCGCCTCTGCTGCAGTCTCTCTTCCTCTaGGACCTTGAAGACGAACCGCCTTTTGCTCCTGGTGCGCAGCAT +
Preference number: 5 (lower is better)
Translates to: WVSKHLSPLLQSLFL*DLEDEPPFAPGAQH
Trigger: ATGCTGCGCACCAGGAGCAAAAGGCGGTTCGTCTTCAAGGTCCCAGAGGAAGAGAGACTGCAGCAGAGGCGAGAGATGCTTAGAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATCACTCAGGCCCGTATTaGCCCATGCCGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: ASPHSCADEQMWSTATNNHSGPY*PMPSSI
Trigger: GATGGAGGACGGCATGGGCAAATACGGGCCTGAGTG...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCGCTTCAACCAGTTGCTaGTGCAGCTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TQNELNAHRDAGCHWSWAASTSC*CSSSFS
Trigger: GGAGAAGGAGGAGCTGCACAAGCAACTGGTTGAAGC...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCTTGGTTTCCGGAAGCTaGATGTCAAAGCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVLVSGS*MSKLPS
Trigger: GGAAGGCAGCTTTGACATCAAGCTTCCGGAAACCAA...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCATCGCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGTGCCAGAGTTCCTCTaGAGTGTGGCCGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ASPHSCADEQMWSTATNNVPEFL*SVAVAM
Trigger: CATGGCCACGGCCACACTCAAGAGGAACTCTGGCAC...ATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGCGATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATATGTGGGCCACGTGGTaGAAGTTGGTTGGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNMWATW*KLVGLD
Trigger: ATCCAACCCAACCAACTTCAACCACGTGGCCCACAT...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CCACAGAGGAGGATTACGATCTTCTCCCTGGGAGCAAGCTCGATCTaGTGTACCTTCTTACAGTCAGCGGCACGGACGATCACATCTCGG +
Preference number: 5 (lower is better)
Translates to: PQRRITIFSLGASSI*CTFLQSAARTITSR
Trigger: CCGAGATGTGATCGTCCGTGCCGCTGACTGTAAGAAGGTACACCAGATCGAGCTTGCTCCCAGGGAGAAGATCGTAATCCTCCTCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559043.1
ENST00000559245.1
CDS-3UTR CAA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGTCATCCACGTCGAAGTaGGATGTGTCAGAGGGACTG +
Preference number: 5 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVSSTSK*DVSEGL
Trigger: CAGTCCCTCTGACACATCCAACTTCGACGTGGATGA...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CAGGGGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATTTATCTCGGTTTGAATaGCTGAGGGCCCGAGATGAG +
Preference number: 5 (lower is better)
Translates to: QGKPGPSCGQAVSAATVNLSRFE*LRARDE
Trigger: CTCATCTCGGGCCCTCAGCAATTCAAACCGAGATAA...ATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CGGTGCTGGGCCACTCAGTGCCGACTTGGGGAAGTGCACGTCCTGAACAGCCTTCTCCAGCTGTCTATTTaGAGCTGTGAGTTTATCCAC +
Preference number: 5 (lower is better)
Translates to: RCWATQCRLGEVHVLNSLLQLSI*SCEFIH
Trigger: GTGGATAAACTCACAGCTCAAAATAGACAGCTGGAG...AAGGCTGTTCAGGACGTGCACTTCCCCAAGTCGGCACTGAGTGGCCCAGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGTGAGGTTGGCGTCCTaGACCTTCCTGAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRQKPWKRMENSTADFTVVRLAS*TFLSSS
Trigger: GGAGGAGCTCAGGAAGGTCAAGGACGCCAACCTCAC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp CAGGGGTGGGAGACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATTCTGAGATCCAAGACTaGGCTCGCAATGACACCAGG +
Preference number: 5 (lower is better)
Translates to: QGWETGCMGVLHVQMEQHSEIQD*ARNDTR
Trigger: CCTGGTGTCATTGCGAGCCAAGTCTTGGATCTCAGA...ATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTCTCCCACCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGCTGTCAGGATGGCCTaGATGAGAGGCAGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: RRQKPWKRMENSTADFTVAVRMA*MRGSEL
Trigger: CAGCTCGCTGCCTCTCATCAAGGCCATCCTGACAGC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCATGAGCTGGCAGCCTTaGGTTTCCGGAAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: DRLYGGPSCADGTASPHSMSWQP*VSGSLM
Trigger: CATCAAGCTTCCGGAAACCAAAGGCTGCCAGCTCAT...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCTCTTCCTCTGGGACCTaGAAGACGAACCGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGSSSGT*KTNRLL
Trigger: CAAAAGGCGGTTCGTCTTCAAGGTCCCAGAGGAAGA...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp GTTGAGAACCGCTCCCGAGAACTTGCTCTTGAAGTAGATCAAGCGTaGAGGCTCGCAGTTGAGGAGGTTGAGGGTGCCTTCAGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VENRSRELALEVDQA*RLAVEEVEGAFRVQ
Trigger: CTGAACTCTGAAGGCACCCTCAACCTCCTCAACTGCGAGCCTCCACGCTTGATCTACTTCAAGAGCAAGTTCTCGGGAGCGGTTCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559790.1
ENST00000560492.1
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACACAGCTCGCTTTCCATTaGCTTGCAGAAGTTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITQLAFH*LAEVLA
Trigger: AGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTG...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATCATACAGGAAGAGCTaGCAGTCACAGACGACTGCA +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITSYRKS*QSQTTA
Trigger: TGCAGTCGTCTGTGACTGCAAGCTCTTCCTGTATGA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGCAAGCGAGGGGTCATaGGGATTTACCAGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITASEGS*GFTRFR
Trigger: TCTAAACCTGGTAAATCCCAATGACCCCTCGCTTGC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAAAGACGAACCGCCTTTaGCTCCTGGTGCGCAGCATC +
Preference number: 5 (lower is better)
Translates to: RRQKPWKRMENSTADFTVKTNRL*LLVRSI
Trigger: GATGCTGCGCACCAGGAGCAAAAGGCGGTTCGTCTT...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATCCGAATCAGGCTCTTaGTCAAAGTCCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITSESGS*SKSWSG
Trigger: TCCAGACCAGGACTTTGACAAAGAGCCTGATTCGGA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGAGCTATTCGATGGAGTaGAGTGTTTGGTGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVSYSME*SVWWSP
Trigger: CGGACTCCACCAAACACTCAACTCCATCGAATAGCT...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CCTTGGCACTTGAACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCTaGTTCACGTCACCAAAGACTTCATGTTCCCACTCTGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: PWHLNKCRGGSTALS*FTSPKTSCSHSGIH
Trigger: ATGAATTCCAGAGTGGGAACATGAAGTCTTTGGTGACGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS-3UTR CAA 90 bp AGACTGGGTACTGAGGCTGTGTCCCCAGATGTCTGCTTCCGAAGCAGCCGCGTCTTCTCCAGCTCGGATTaGATTTTGGAAATCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RLGTEAVSPDVCFRSSRVFSSSD*ILEISC
Trigger: GCAAGAGATTTCCAAAATCAAATCCGAGCTGGAGAA...GACGCGGCTGCTTCGGAAGCAGACATCTGGGGACACAGCCTCAGTACCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp ATTCCATTCTGCCCCAGCCGGCGTTCTCTACTGCAGATCAGTCTCTaGATGAGGTCCTTCGCTTCTTCAGATACATCCGTGACATGGGAT +
Preference number: 5 (lower is better)
Translates to: IPFCPSRRSLLQISL*MRSFASSDTSVTWD
Trigger: ATCCCATGTCACGGATGTATCTGAAGAAGCGAAGGACCTCATCCAGAGACTGATCTGCAGTAGAGAACGCCGGCTGGGGCAGAATGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp CCACAGAGGAGGATTACGATCTTCTCCCTGGGAGCAAGCTCGATCTaGTGTACCTTCTTACAGTCAGCGGCACGGACGATCAATGAAATG +
Preference number: 5 (lower is better)
Translates to: PQRRITIFSLGASSI*CTFLQSAARTINEM
Trigger: CATTTCATTGATCGTCCGTGCCGCTGACTGTAAGAAGGTACACCAGATCGAGCTTGCTCCCAGGGAGAAGATCGTAATCCTCCTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558867.1
CDS-3UTR CAA 90 bp ACCCAGAATGAACTTAATGCACACAGGGACGCAGGGTGTCACTGGTCCTGGGCCTGCACATCCTCATCTTaGGTTAATGTGTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: TQNELNAHRDAGCHWSWACTSSS*VNVLDC
Trigger: GCAGTCCAACACATTAACCAAAGATGAGGATGTGCA...GGCCCAGGACCAGTGACACCCTGCGTCCCTGTGTGCATTAAGTTCATTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GCCTCACAGCTGTGCAGACGAACAGATGTGGTCTACTGCCACGAACAATGCGGCTCGGAATCCTTTAGTTaGCTTTCCAAGGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ASQLCRRTDVVYCHEQCGSESFS*LSKVRL
Trigger: CAACCTCACCTTGGAAAGCAAACTAAAGGATTCCGA...GCCGCATTGTTCGTGGCAGTAGACCACATCTGTTCGTCTGCACAGCTGTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTGTGGTCGCTCGAGCCTGTTaGAATCTGCTATTTTATTCT +
Preference number: 5 (lower is better)
Translates to: GCMGVLHVQMEQHRLTAVVARAC*NLLFYS
Trigger: AGAATAAAATAGCAGATTCAAACAGGCTCGAGCGAC...CACAGCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACAGGGTTGGATATCATTTaGGATCTCAATTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITGLDII*DLNSGS
Trigger: AGACCCAGAATTGAGATCCAAAATGATATCCAACCC...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCTCTTTGGTTAATGTGTaGGACTGCATTATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: DRLYGGPSCADGTASPHSSLVNV*DCIMLF
Trigger: GAAGAGCATAATGCAGTCCAACACATTAACCAAAGA...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATCAGCAGTTAGCTTCTaGTTTTCATCAAACAGCATC +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITSAVSF*FSSNSI
Trigger: GATGCTGTTTGATGAAAACAAGAAGCTAACTGCTGA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GACAGGCTGTATGGGGGTCCTTCATGTGCAGATGGAACAGCATCGCCTCACAGCGCAAGAGGAGCAGTGTaGAAATACTCAAAAATGGAA +
Preference number: 5 (lower is better)
Translates to: DRLYGGPSCADGTASPHSARGAV*KYSKME
Trigger: TTCCATTTTTGAGTATTTCAACACTGCTCCTCTTGC...GCTGTGAGGCGATGCTGTTCCATCTGCACATGAAGGACCCCCATACAGCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp AGGAGGCAGAAGCCGTGGAAGCGAATGGAAAACAGCACAGCTGACTTCACAGTAGGAGCCACAATCTCATaGAACTTTCTGTGGAATGGC +
Preference number: 5 (lower is better)
Translates to: RRQKPWKRMENSTADFTVGATIS*NFLWNG
Trigger: GCCATTCCACAGAAAGTTCAATGAGATTGTGGCTCC...TACTGTGAAGTCAGCTGTGCTGTTTTCCATTCGCTTCCACGGCTTCTGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp GGAAGCCTGGCCCAAGCTGTGGACAAGCTGTGTCTGCCGCCACAGTTAATCACATTGAAGTTGGTTGGGTaGGATATCATTTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: GSLAQAVDKLCLPPQLITLKLVG*DIILDL
Trigger: GAGATCCAAAATGATATCCAACCCAACCAACTTCAA...TGTGATTAACTGTGGCGGCAGACACAGCTTGTCCACAGCTTGGGCCAGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp AGTCTCTGGATGAGGTCCTTCGCTTCTTCAGATACATCCGTGACATaGGATGGGAACTGGAATCGCTCTTCATGGTTCATGATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLWMRSFASSDTSVT*DGNWNRSSWFMIFP
Trigger: TGGGAAGATCATGAACCATGAAGAGCGATTCCAGTTCCCATCCCATGTCACGGATGTATCTGAAGAAGCGAAGGACCTCATCCAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 90 bp AGGGAACATGCACGACCTGATTCCTCAGCCGGTTTTTATGAAGGATaGACTGGAGTCCTTCTAGAATCCCAACCCACTTCCTCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: REHARPDSSAGFYEG*TGVLLESQPTSSFH
Trigger: ATGAAAAGAGGAAGTGGGTTGGGATTCTAGAAGGACTCCAGTCCATCCTTCATAAAAACCGGCTGAGGAATCAGGTCGTGCATGTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS-3UTR CAA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGACTGGTCCTGGGCCTTaGTCCATGACTAGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGTGPGP*SMTRWS
Trigger: TGACCACCTAGTCATGGACAAAGGCCCAGGACCAGT...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS-3UTR CAA 90 bp TATAGGACCTCCTACTATTCTCTTAAGGTCCTAGGAAAGTTTCAGGAACTAGGGCGTATTTATCTTTTATaGTACCTACTGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: YRTSYYSLKVLGKFQELGRIYLL*YLLPPP
Trigger: TGGAGGAGGCAGTAGGTACAATAAAAGATAAATACG...CCCTAGTTCCTGAAACTTTCCTAGGACCTTAAGAGAATAGTAGGAGGTCCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp CCGACATCTTGGGCTCCGTCCCGACGGCGCAGAGTCTaGGGCGCCGGGCCCCGCGGGTCCATGGGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: PTSWAPSRRRRV*GAGPRGSMGRS
Trigger: AGAGCGGCCCATGGACCCGCGGGGCCCGGCGCCCCAGACTCTGCGCCGTCGGGACGGAGCCCAAGATGTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AGCCAGGGCCTGCGTGGTGGGCAACGGCACAGCGGATaGCCTCTGCGGGGGCCGAGCCATGTCCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SQGLRGGQRHSG*PLRGPSHVLLL
Trigger: CAGCAGGAGGACATGGCTCGGCCCCCGCAGAGGCCATCCGCTGTGCCGTTGCCCACCACGCAGGCCCTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000634889.1
CDS TCA 72 bp GGCTGCAACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCGCGCGTGCCCTCCGGCCTTGCGGGT +
Preference number: 6 (lower is better)
Translates to: GCNYRRQEPQAT*APARVPSGLAG
Trigger: ACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp CTACAGGCGACAGGAGCCGCAGGCCACATGAGCTCCTaGGCGCGTGCCCTCCGGCCTTGCGGGTCCACGTAC +
Preference number: 6 (lower is better)
Translates to: LQATGAAGHMSS*ARALRPCGSTY
Trigger: GTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS GCA 72 bp GTGGCGAGCTGGCGGCTTCAGGTGTCACAGGCCGGCTaGTCCAGGCCTTCGAGGGGGAGCTGGCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: VASWRLQVSQAG*SRPSRGSWLLW
Trigger: CCACAGGAGCCAGCTCCCCCTCGAAGGCCTGGAGCAGCCGGCCTGTGACACCTGAAGCCGCCAGCTCGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp CAGCCACGGTGTCCCTGCCTTCCGGGCTCCTCCTCGTaGACCACCCCGAGGCTGCTGAGGCTGAGCCATCCC +
Preference number: 6 (lower is better)
Translates to: QPRCPCLPGSSS*TTPRLLRLSHP
Trigger: GGGATGGCTCAGCCTCAGCAGCCTCGGGGTGGTGCACGAGGAGGAGCCCGGAAGGCAGGGACACCGTGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS GCA 72 bp TCCCTCCTGGGACAGTGGCTCCAGCCACGGTGTCCCTaGCTTCCGGGCTCCTCCTCGTGCACCACCCCGAGG +
Preference number: 6 (lower is better)
Translates to: SLLGQWLQPRCP*LPGSSSCTTPR
Trigger: CCTCGGGGTGGTGCACGAGGAGGAGCCCGGAAGGCAGGGACACCGTGGCTGGAGCCACTGTCCCAGGAGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CCA 72 bp GCTTGTTCCTGGATGGAGGCTGGCGAGCCAGGTTGGTaGGAGCGGGGCCCGGCCTTTCCTCCTGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: ACSWMEAGEPGW*ERGPAFPPGRG
Trigger: CCCCCTCCCAGGAGGAAAGGCCGGGCCCCGCTCCCACCAACCTGGCTCGCCAGCCTCCATCCAGGAACAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 72 bp TCCAGGAGCAGCTGCTCCAGCTTCTTGAGCCGCACCTaGGCCGACATGGTGCCGCGCGGCCCGCTCCCGACG +
Preference number: 6 (lower is better)
Translates to: SRSSCSSFLSRT*ADMVPRGPLPT
Trigger: CGTCGGGAGCGGGCCGCGCGGCACCATGTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGCTGCTCCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp GACAGGAGCCGCAGGCCACATGAGCTCCTGCGCGCGTaGCCTCCGGCCTTGCGGGTCCACGTACAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: DRSRRPHELLRA*PPALRVHVQSH
Trigger: ATGGGACTGTACGTGGACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS GCA 72 bp GGGGGCACAGCACTCAGAGGCAGGTCCATGAGCACCTaGATGCCGTCGCCTGGGCCCATGTGGGCCACGTGG +
Preference number: 6 (lower is better)
Translates to: GGTALRGRSMST*MPSPGPMWATW
Trigger: CCACGTGGCCCACATGGGCCCAGGCGACGGCATGCAGGTGCTCATGGACCTGCCTCTGAGTGCTGTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AGGGCTTGTTCCTGGATGGAGGCTGGCGAGCCAGGTTaGTGGGAGCGGGGCCCGGCCTTTCCTCCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: RACSWMEAGEPG*WERGPAFPPGR
Trigger: CCTCCCAGGAGGAAAGGCCGGGCCCCGCTCCCACCAACCTGGCTCGCCAGCCTCCATCCAGGAACAAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp GGCCAGAGAGCGTACTGCCGGTCTCGGGGTCCCTCCTaGGACAGTGGCTCCAGCCACGGTGTCCCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GQRAYCRSRGPS*DSGSSHGVPAF
Trigger: GAAGGCAGGGACACCGTGGCTGGAGCCACTGTCCCAGGAGGGACCCCGAGACCGGCAGTACGCTCTCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS GCA 72 bp CGGCCACGTACTTGTCGCGGCGCAGGGCCGAGTGGCTaGACTCGGTGTACAGGCAGACGAGCACGTCGAGCA +
Preference number: 6 (lower is better)
Translates to: RPRTCRGAGPSG*TRCTGRRARRA
Trigger: TGCTCGACGTGCTCGTCTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AGCCCCCGCAGCCGCTGCGTGGAGTCCTCACGCTCTTaGCGAAGCGCCACTGTGTCCTCAAGCTGTCGCTCG +
Preference number: 6 (lower is better)
Translates to: SPRSRCVESSRS*RSATVSSSCRS
Trigger: CGAGCGACAGCTTGAGGACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTCCACGCAGCGGCTGCGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 72 bp CAGCCCCCGCAGCCGCTGCGTGGAGTCCTCACGCTCTaGGCGAAGCGCCACTGTGTCCTCAAGCTGTCGCTC +
Preference number: 6 (lower is better)
Translates to: QPPQPLRGVLTL*AKRHCVLKLSL
Trigger: GAGCGACAGCTTGAGGACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTCCACGCAGCGGCTGCGGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 72 bp CCGATGCCTCGCTGCACGTCCACGCCCAGAGGCCTCTaGGACTGCTCGGGAGGTATTGGGCACACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PMPRCTSTPRGL*DCSGGIGHTWG
Trigger: CCCCCAGGTGTGCCCAATACCTCCCGAGCAGTCCAAGAGGCCTCTGGGCGTGGACGTGCAGCGAGGCATCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559043.1
ENST00000634889.1
CDS TCA 72 bp CACCTGCCCTCGGGCCGGAGGCCAAGCCTTGGCACTTaGACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: HLPSGRRPSLGT*TSAEAAALPSA
Trigger: AGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 72 bp GCAGCTCCAGCCGCGCGGACATGTCCAGCTTCTGGCTaGGGCGCACCTTCCACAGCGGGTCCAGTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: AAPAARTCPASG*GAPSTAGPVFL
Trigger: CAAGAACACTGGACCCGCTGTGGAAGGTGCGCCGCAGCCAGAAGCTGGACATGTCCGCGCGGCTGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS CCA 72 bp AACTCGGCCACGTACTTGTCGCGGCGCAGGGCCGAGTaGCTGCACTCGGTGTACAGGCAGACGAGCACGTCG +
Preference number: 6 (lower is better)
Translates to: NSATYLSRRRAE*LHSVYRQTSTS
Trigger: CGACGTGCTCGTCTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp CTGCTTCTCCAGCCCCCGCAGCCGCTGCGTGGAGTCCTCACGCTCTaGGCGAAGCGCCACTGTGTCCTCAAGCTGTCGCTCGAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LLLQPPQPLRGVLTL*AKRHCVLKLSLEPV
Trigger: AACAGGCTCGAGCGACAGCTTGAGGACACAGTGGCGCTTCGCCAAGAGCGTGAGGACTCCACGCAGCGGCTGCGGGGGCTGGAGAAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp TATACATACTACAGGCGACAGGAGCCGCAGGCCACATaGGCTCCTGCGCGCGTGCCCTCCGGCCTTGCGGGT +
Preference number: 6 (lower is better)
Translates to: YTYYRRQEPQAT*APARVPSGLAG
Trigger: ACCCGCAAGGCCGGAGGGCACGCGCGCAGGAGCTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTATGTATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559245.1
CDS GCA 72 bp CTCGGGCCGGAGGCCAAGCCTTGGCACTTGAACAAGTaGAGAGGCGGCAGCACTGCCCTCAGCTGGTTCACG +
Preference number: 6 (lower is better)
Translates to: LGPEAKPWHLNK*RGGSTALSWFT
Trigger: CGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 72 bp CACCGAGGCCGCCTTACCCTCCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGCACATCAAAGACGTCC +
Preference number: 6 (lower is better)
Translates to: HRGRLTLRRPMV*THSMVRTSKTS
Trigger: GGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGGTAAGGCGGCCTCGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS GCA 72 bp GTCTGTGTTCACTGGGAAGCAGGCCAGAGAGCGTACTaGCGGTCTCGGGGTCCCTCCTGGGACAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: VCVHWEAGQRAY*RSRGPSWDSGS
Trigger: GGAGCCACTGTCCCAGGAGGGACCCCGAGACCGGCAGTACGCTCTCTGGCCTGCTTCCCAGTGAACACAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CAA 72 bp CAGGAACTCACCTGCCCTCGGGCCGGAGGCCAAGCCTaGGCACTTGAACAAGTGCAGAGGCGGCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: QELTCPRAGGQA*ALEQVQRRQHC
Trigger: GCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGAGTTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CAA 90 bp CTCAGGAACTCACCTGCCCTCGGGCCGGAGGCCAAGCCTTGGCACTaGAACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCTGGTTCACG +
Preference number: 6 (lower is better)
Translates to: LRNSPALGPEAKPWH*NKCRGGSTALSWFT
Trigger: CGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGAGTTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CAA 90 bp ACAGTGGCTCAGGAACTCACCTGCCCTCGGGCCGGAGGCCAAGCCTaGGCACTTGAACAAGTGCAGAGGCGGCAGCACTGCCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: TVAQELTCPRAGGQA*ALEQVQRRQHCPQL
Trigger: CAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGCTTGGCCTCCGGCCCGAGGGCAGGTGAGTTCCTGAGCCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 72 bp TCCTCCTCCTTGTCTCGCAGCTGCCGGGACACCTTCTaGTTCTGGGCACGGAGCTCTGCCATGCGCTCGTTC +
Preference number: 6 (lower is better)
Translates to: SSSLSRSCRDTF*FWARSSAMRSF
Trigger: GAACGAGCGCATGGCAGAGCTCCGTGCCCAGAAGCAGAAGGTGTCCCGGCAGCTGCGAGACAAGGAGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp GGCCTCTTGGACTGCTCGGGAGGTATTGGGCACACCTaGGGGGCACCGTCTTTGCAGGACACGTGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: GLLDCSGGIGHT*GAPSLQDTWQA
Trigger: TGCTTGCCACGTGTCCTGCAAAGACGGTGCCCCCCAGGTGTGCCCAATACCTCCCGAGCAGTCCAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559043.1
ENST00000634889.1
CDS CCA 72 bp CAGAGGCAGGTCCATGAGCACCTGCATGCCGTCGCCTaGGCCCATGTGGGCCACGTGGTTGAAGTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: QRQVHEHLHAVA*AHVGHVVEVGW
Trigger: CCAACCAACTTCAACCACGTGGCCCACATGGGCCCAGGCGACGGCATGCAGGTGCTCATGGACCTGCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp CACCTGATGAGGGCCACGAGATGTAGGGCTTGTTCCTaGATGGAGGCTGGCGAGCCAGGTTGGTGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: HLMRATRCRACS*MEAGEPGWWER
Trigger: CCGCTCCCACCAACCTGGCTCGCCAGCCTCCATCCAGGAACAAGCCCTACATCTCGTGGCCCTCATCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AAGACGTCCACGCCATACTCGCTGTACACCGTGACGTaGGTGGGGCTGCAACCTAGCGCAGACGGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: KTSTPYSLYTVT*VGLQPSADGAG
Trigger: CCCTGCTCCGTCTGCGCTAGGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CAA 72 bp AATGGTTTAGCCCACTCGAGGAACTCGGCCACGTACTaGTCGCGGCGCAGGGCCGAGTGGCTGCACTCGGTG +
Preference number: 6 (lower is better)
Translates to: NGLAHSRNSATY*SRRRAEWLHSV
Trigger: CACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTTCCTCGAGTGGGCTAAACCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp GGTGGTTCTCGTCCTGAAAGGCGTAGTGCAGCGCGGTaGTCCACTGGCAGTCGCCGTTCACCAGCACATCGC +
Preference number: 6 (lower is better)
Translates to: GGSRPERRSAAR*STGSRRSPAHR
Trigger: GCGATGTGCTGGTGAACGGCGACTGCCAGTGGATCACCGCGCTGCACTACGCCTTTCAGGACGAGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000558321.5
ENST00000561271.1
CDS GCA 72 bp GAATTGCTGAGGGCCCGAGATGAGCCGTGGAGGGACTaGACGGTCTGGGTGGACTCTTGCAGCTTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: ELLRARDEPWRD*TVWVDSCSFLL
Trigger: GAGCAGGAAGCTGCAAGAGTCCACCCAGACCGTGCAGTCCCTCCACGGCTCATCTCGGGCCCTCAGCAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp CCCTCCGCAGGCCGATGGTCTGCACCCACTCCATGGTaGGCACATCAAAGACGTCCACGCCATACTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PSAGRWSAPTPW*AHQRRPRHTRC
Trigger: ACAGCGAGTATGGCGTGGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS CCA 72 bp AAGACGTCCACGCCATACTCGCTGTACACCGTGACGTaGGTGGGGCTGCAACTACAGGCGACAGGAGCCGCA +
Preference number: 6 (lower is better)
Translates to: KTSTPYSLYTVT*VGLQLQATGAA
Trigger: TGCGGCTCCTGTCGCCTGTAGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp AGCTGTGTAAATGGTTTAGCCCACTCGAGGAACTCGGCCACGTACTaGTCGCGGCGCAGGGCCGAGTGGCTGCACTCGGTGTACAGGCAG +
Preference number: 6 (lower is better)
Translates to: SCVNGLAHSRNSATY*SRRRAEWLHSVYRQ
Trigger: CTGCCTGTACACCGAGTGCAGCCACTCGGCCCTGCGCCGCGACAAGTACGTGGCCGAGTTCCTCGAGTGGGCTAAACCATTTACACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp CATCAAAGACGTCCACGCCATACTCGCTGTACACCGTaGCGTGGGTGGGGCTGCAACCTAGCGCAGACGGAG +
Preference number: 6 (lower is better)
Translates to: HQRRPRHTRCTP*RGWGCNLAQTE
Trigger: CTCCGTCTGCGCTAGGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS GCA 72 bp CCCACACAGAGCCTGTCCCTGAGCACCGCCAGGCACTaGACGCTGCCGGGAGCCACAATCTCATTGAACTTT +
Preference number: 6 (lower is better)
Translates to: PTQSLSLSTARH*TLPGATISLNF
Trigger: AAAGTTCAATGAGATTGTGGCTCCCGGCAGCGTGCAGTGCCTGGCGGTGCTCAGGGACAGGCTCTGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS GCA 72 bp TCCTCCGCAGGCCGATGGTCTGCACCCACTCCATGGTaGGCACATCAAAGACGTCCACGCCATACTCGCTGT +
Preference number: 6 (lower is better)
Translates to: SSAGRWSAPTPW*AHQRRPRHTRC
Trigger: ACAGCGAGTATGGCGTGGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000560492.1
CDS GCA 72 bp GAGTTCAGGGGCCTTATCCTCCGCAGGCCGATGGTCTaGACCCACTCCATGGTGCGCACATCAAAGACGTCC +
Preference number: 6 (lower is better)
Translates to: EFRGLILRRPMV*THSMVRTSKTS
Trigger: GGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGATAAGGCCCCTGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000560492.1
CDS GCA 72 bp ACGTTTCTGCTCCTAGACCCAGGGCTGTGGAGCGGGTaGATGCCAGGATACCTTTGCCCTTCCTCGCTGGGA +
Preference number: 6 (lower is better)
Translates to: TFLLLDPGLWSG*MPGYLCPSSLG
Trigger: TCCCAGCGAGGAAGGGCAAAGGTATCCTGGCATGCACCCGCTCCACAGCCCTGGGTCTAGGAGCAGAAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558867.1
CDS CCA 72 bp TTACCCTCCGCAGGCCGATGGTCTGCACCCACTCCATaGTGCGCACATCAAAGACGTCCACGCCATACTCGC +
Preference number: 6 (lower is better)
Translates to: LPSAGRWSAPTP*CAHQRRPRHTR
Trigger: GCGAGTATGGCGTGGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS TCA 72 bp TCCGGCCTTGCGGGTCCACGTACAGTCCCATGTGGCTaGAGCAAAGCAGGTACTCCTCGCTTTCGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SGLAGPRTVPCG*SKAGTPRFRAP
Trigger: TGGAGCTCGAAAGCGAGGAGTACCTGCTTTGCTTCAGCCACATGGGACTGTACGTGGACCCGCAAGGCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS TCA 72 bp CATCAAAGACGTCCACGCCATACTCGCTGTACACCGTaGCGTGGGTGGGGCTGCAACTACAGGCGACAGGAG +
Preference number: 6 (lower is better)
Translates to: HQRRPRHTRCTP*RGWGCNYRRQE
Trigger: CTCCTGTCGCCTGTAGTTGCAGCCCCACCCACGTCACGGTGTACAGCGAGTATGGCGTGGACGTCTTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp CTCGCCTCTGCTGCAGTCTCTCTTCCTCTGGGACCTTaGAGACGAACCGCCTTTTGCTCCTGGTGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: LASAAVSLPLGP*RRTAFCSWCAA
Trigger: TGCTGCGCACCAGGAGCAAAAGGCGGTTCGTCTTCAAGGTCCCAGAGGAAGAGAGACTGCAGCAGAGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp AAGAGCTTGCAGTCACAGACGACTGCATATGCGCGCTaGCATCCCTTCTTCACCCCCGTGGGCTTTGGGACC +
Preference number: 6 (lower is better)
Translates to: KSLQSQTTAYAR*HPFFTPVGFGT
Trigger: GGTCCCAAAGCCCACGGGGGTGAAGAAGGGATGGCAGCGCGCATATGCAGTCGTCTGTGACTGCAAGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS GCA 72 bp GATTTACCAGGTTTAGAGGCTGCCCGTCCCCCTGGATaGTCAGCAGGCAGAACCCAGAAGGGTAGCCCACAC +
Preference number: 6 (lower is better)
Translates to: DLPGLEAARPPG*SAGRTQKGSPH
Trigger: GTGTGGGCTACCCTTCTGGGTTCTGCCTGCTGAGCATCCAGGGGGACGGGCAGCCTCTAAACCTGGTAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS GCA 72 bp AGCGAGGGGTCATTGGGATTTACCAGGTTTAGAGGCTaGCCGTCCCCCTGGATGCTCAGCAGGCAGAACCCA +
Preference number: 6 (lower is better)
Translates to: SEGSLGFTRFRG*PSPWMLSRQNP
Trigger: TGGGTTCTGCCTGCTGAGCATCCAGGGGGACGGGCAGCCTCTAAACCTGGTAAATCCCAATGACCCCTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS GCA 72 bp ACCAGCACATCGCGCTCCTCTCGGAAGCACGCGGTCTaGAAAGCAACGAGGGGTGTCAGTCTGTGTTCACTG +
Preference number: 6 (lower is better)
Translates to: TSTSRSSRKHAV*KATRGVSLCSL
Trigger: CAGTGAACACAGACTGACACCCCTCGTTGCTTTGCAGACCGCGTGCTTCCGAGAGGAGCGCGATGTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CCA 72 bp TTATCCTCCGCAGGCCGATGGTCTGCACCCACTCCATaGTGCGCACATCAAAGACGTCCACGCCATACTCGC +
Preference number: 6 (lower is better)
Translates to: LSSAGRWSAPTP*CAHQRRPRHTR
Trigger: GCGAGTATGGCGTGGACGTCTTTGATGTGCGCACCATGGAGTGGGTGCAGACCATCGGCCTGCGGAGGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000560492.1
CDS CCA 72 bp GAGGGTGCCTTCAGAGTTCAGGGGCCTTATCTGGATTaGAAACCAGGGAGGGACAGTAAGCGCGGCCACGCA +
Preference number: 6 (lower is better)
Translates to: EGAFRVQGPYLD*KPGRDSKRGHA
Trigger: TGCGTGGCCGCGCTTACTGTCCCTCCCTGGTTTCCAATCCAGATAAGGCCCCTGAACTCTGAAGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS CCA 72 bp TCTGCAAAGCAACGAGGGGTGTCAGTCTGTGTTCACTaGGAAGCAGGCCAGAGAGCGTACTGCCGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: SAKQRGVSVCVH*EAGQRAYCRSR
Trigger: CCGAGACCGGCAGTACGCTCTCTGGCCTGCTTCCCAGTGAACACAGACTGACACCCCTCGTTGCTTTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561271.1
CDS CAA 72 bp TTCACGGCCACAAACAGGCAGGTGCCAGAGTTCCTCTaGAGTGTGGCCGTGGCCATGAGCTGGCAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: FTATNRQVPEFL*SVAVAMSWQPL
Trigger: CAAAGGCTGCCAGCTCATGGCCACGGCCACACTCAAGAGGAACTCTGGCACCTGCCTGTTTGTGGCCGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 72 bp CTTTTGCTCCTGGTGCGCAGCATCTGCTTCTTGCTGTaGTCGGAGGTGTCCGGCACGTTGAGAACCGCTCCC +
Preference number: 6 (lower is better)
Translates to: LLLLVRSICFLL*SEVSGTLRTAP
Trigger: GGGAGCGGTTCTCAACGTGCCGGACACCTCCGACAACAGCAAGAAGCAGATGCTGCGCACCAGGAGCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp AGTGTGGCCGTGGCCATGAGCTGGCAGCCTTTGGTTTCCGGAAGCTaGATGTCAAAGCTGCCTTCCGCTCCATCAAGGGACGACCACGGA +
Preference number: 6 (lower is better)
Translates to: SVAVAMSWQPLVSGS*MSKLPSAPSRDDHG
Trigger: TCCGTGGTCGTCCCTTGATGGAGCGGAAGGCAGCTTTGACATCAAGCTTCCGGAAACCAAAGGCTGCCAGCTCATGGCCACGGCCACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 90 bp ATCAGCCGTTTCACGGCCACAAACAGGCAGGTGCCAGAGTTCCTCTaGAGTGTGGCCGTGGCCATGAGCTGGCAGCCTTTGGTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: ISRFTATNRQVPEFL*SVAVAMSWQPLVSG
Trigger: TCCGGAAACCAAAGGCTGCCAGCTCATGGCCACGGCCACACTCAAGAGGAACTCTGGCACCTGCCTGTTTGTGGCCGTGAAACGGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 90 bp ACGAACCGCCTTTTGCTCCTGGTGCGCAGCATCTGCTTCTTGCTGTaGTCGGAGGTGTCCGGCACGTTGAGAACCGCTCCCGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: TNRLLLLVRSICFLL*SEVSGTLRTAPENL
Trigger: CAAGTTCTCGGGAGCGGTTCTCAACGTGCCGGACACCTCCGACAACAGCAAGAAGCAGATGCTGCGCACCAGGAGCAAAAGGCGGTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp CCGGCCTCCTTGCTTCACCTTGAGGGCCTCCAGCTCGCTTTCCATTaGCTTGCAGAAGTTCTCGCTGTGCTCACGAAGCTTGCGCTCCTT +
Preference number: 6 (lower is better)
Translates to: PASLLHLEGLQLAFH*LAEVLAVLTKLALL
Trigger: AAGGAGCGCAAGCTTCGTGAGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTGGAGGCCCTCAAGGTGAAGCAAGGAGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AGGTTGAGGGTGCCTTCAGAGTTCAGGGGCCTTATCTaGATTGGAAACCAGGGAGGGACAGTAAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RLRVPSEFRGLI*IGNQGGTVSAA
Trigger: GGCCGCGCTTACTGTCCCTCCCTGGTTTCCAATCCAGATAAGGCCCCTGAACTCTGAAGGCACCCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559790.1
CDS CAA 90 bp CCTCCTTGCTTCACCTTGAGGGCCTCCAGCTCGCTTTCCATTTGCTaGCAGAAGTTCTCGCTGTGCTCACGAAGCTTGCGCTCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: PPCFTLRASSSLSIC*QKFSLCSRSLRSLE
Trigger: CTCCAAGGAGCGCAAGCTTCGTGAGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTGGAGGCCCTCAAGGTGAAGCAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp CCAGAGTTCCTCTTGAGTGTGGCCGTGGCCATGAGCTGGCAGCCTTaGGTTTCCGGAAGCTTGATGTCAAAGCTGCCTTCCGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: PEFLLSVAVAMSWQP*VSGSLMSKLPSAPS
Trigger: TGATGGAGCGGAAGGCAGCTTTGACATCAAGCTTCCGGAAACCAAAGGCTGCCAGCTCATGGCCACGGCCACACTCAAGAGGAACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 90 bp CTAAGCATCTCTCGCCTCTGCTGCAGTCTCTCTTCCTCTGGGACCTaGAAGACGAACCGCCTTTTGCTCCTGGTGCGCAGCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LSISRLCCSLSSSGT*KTNRLLLLVRSICF
Trigger: GAAGCAGATGCTGCGCACCAGGAGCAAAAGGCGGTTCGTCTTCAAGGTCCCAGAGGAAGAGAGACTGCAGCAGAGGCGAGAGATGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp ATCAGCCCAACCATCAGGGAGGTGCAGTGGCTGCACTaGGTAGGGCTGGAGAAGGACTTGATGCTGAACTGG +
Preference number: 6 (lower is better)
Translates to: ISPTIREVQWLH*VGLEKDLMLNW
Trigger: CCAGTTCAGCATCAAGTCCTTCTCCAGCCCTACTCAGTGCAGCCACTGCACCTCCCTGATGGTTGGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559043.1
ENST00000634889.1
CDS TCA 72 bp CGGTGGGCCGCTGGGGTTGGAGCTATTCGATGGAGTTaGGTGTTTGGTGGAGTCCGAATCAGGCTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: RWAAGVGAIRWS*VFGGVRIRLFV
Trigger: GACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCAGCGGCCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS GCA 72 bp ATACAGGAAGAGCTTGCAGTCACAGACGACTGCATATaGGCGCTGCCATCCCTTCTTCACCCCCGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: IQEELAVTDDCI*ALPSLLHPRGL
Trigger: AAGCCCACGGGGGTGAAGAAGGGATGGCAGCGCGCATATGCAGTCGTCTGTGACTGCAAGCTCTTCCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS GCA 72 bp GCCTTGGCACTTGAACAAGTGCAGAGGCGGCAGCACTaGCCTCAGCTGGTTCACGTCACCAAAGACTTCATG +
Preference number: 6 (lower is better)
Translates to: ALALEQVQRRQH*PQLVHVTKDFM
Trigger: CATGAAGTCTTTGGTGACGTGAACCAGCTGAGGGCAGTGCTGCCGCCTCTGCACTTGTTCAAGTGCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559790.1
ENST00000560492.1
CDS CCA 72 bp CGCTCCCGAGAACTTGCTCTTGAAGTAGATCAAGCGTaGAGGCTCGCAGTTGAGGAGGTTGAGGGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RSRELALEVDQA*RLAVEEVEGAF
Trigger: GAAGGCACCCTCAACCTCCTCAACTGCGAGCCTCCACGCTTGATCTACTTCAAGAGCAAGTTCTCGGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000559790.1
ENST00000560492.1
CDS CAA 72 bp CTCTTGAGTGTGGCCGTGGCCATGAGCTGGCAGCCTTaGGTTTCCGGAAGCTTGATGTCAAAGCTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LLSVAVAMSWQP*VSGSLMSKLPS
Trigger: GGAAGGCAGCTTTGACATCAAGCTTCCGGAAACCAAAGGCTGCCAGCTCATGGCCACGGCCACACTCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 90 bp GCTTCGGAATCCTTTAGTTTGCTTTCCAAGGTGAGGTTGGCGTCCTaGACCTTCCTGAGCTCCTCCTGGACAAGCTGCTTGGCCCGGATC +
Preference number: 6 (lower is better)
Translates to: ASESFSLLSKVRLAS*TFLSSSWTSCLARI
Trigger: GATCCGGGCCAAGCAGCTTGTCCAGGAGGAGCTCAGGAAGGTCAAGGACGCCAACCTCACCTTGGAAAGCAAACTAAAGGATTCCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS CAA 90 bp AGTTGGGGCTCGGTGGGCCGCTGGGGTTGGAGCTATTCGATGGAGTaGAGTGTTTGGTGGAGTCCGAATCAGGCTCTTTGTCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SWGSVGRWGWSYSME*SVWWSPNQALCQSP
Trigger: AGGACTTTGACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCAGCGGCCCACCGAGCCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp TGCCCCAGCCGGCGTTCTCTACTGCAGATCAGTCTCTaGATGAGGTCCTTCGCTTCTTCAGATACATCCGTG +
Preference number: 6 (lower is better)
Translates to: CPSRRSLLQISL*MRSFASSDTSV
Trigger: CACGGATGTATCTGAAGAAGCGAAGGACCTCATCCAGAGACTGATCTGCAGTAGAGAACGCCGGCTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AAGACTGTTGTGAGAGGAACGCAAGCGAGGGGTCATTaGGATTTACCAGGTTTAGAGGCTGCCCGTCCCCCT +
Preference number: 6 (lower is better)
Translates to: KTVVRGTQARGH*DLPGLEAARPP
Trigger: AGGGGGACGGGCAGCCTCTAAACCTGGTAAATCCCAATGACCCCTCGCTTGCGTTCCTCTCACAACAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559245.1
CDS CAA 72 bp TTCACCTTGAGGGCCTCCAGCTCGCTTTCCATTTGCTaGCAGAAGTTCTCGCTGTGCTCACGAAGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: FTLRASSSLSIC*QKFSLCSRSLR
Trigger: GCGCAAGCTTCGTGAGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTGGAGGCCCTCAAGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 72 bp GCCAGGCACTGCACGCTGCCGGGAGCCACAATCTCATaGAACTTTCTGTGGAATGGCTTCGTTCTCTGGATC +
Preference number: 6 (lower is better)
Translates to: ARHCTLPGATIS*NFLWNGFVLWI
Trigger: GATCCAGAGAACGAAGCCATTCCACAGAAAGTTCAATGAGATTGTGGCTCCCGGCAGCGTGCAGTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 72 bp AAAGACTGTTGTGAGAGGAACGCAAGCGAGGGGTCATaGGGATTTACCAGGTTTAGAGGCTGCCCGTCCCCC +
Preference number: 6 (lower is better)
Translates to: KDCCERNASEGS*GFTRFRGCPSP
Trigger: GGGGGACGGGCAGCCTCTAAACCTGGTAAATCCCAATGACCCCTCGCTTGCGTTCCTCTCACAACAGTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559245.1
CDS CAA 72 bp TCGGTGGGCCGCTGGGGTTGGAGCTATTCGATGGAGTaGAGTGTTTGGTGGAGTCCGAATCAGGCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: SVGRWGWSYSME*SVWWSPNQALC
Trigger: ACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCAGCGGCCCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp CCAGGCACTGCACGCTGCCGGGAGCCACAATCTCATTaGACTTTCTGTGGAATGGCTTCGTTCTCTGGATCT +
Preference number: 6 (lower is better)
Translates to: PGTARCREPQSH*TFCGMASFSGS
Trigger: AGATCCAGAGAACGAAGCCATTCCACAGAAAGTTCAATGAGATTGTGGCTCCCGGCAGCGTGCAGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS GCA 72 bp TTCTTCTCCAGCTCGGATTTGATTTTGGAAATCTCTTaGTGGTGCTCTAAGGTGGCACCCGCTCCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: FFSSSDLILEIS*WCSKVAPAPRP
Trigger: AGGCCGGGGAGCGGGTGCCACCTTAGAGCACCAGCAAGAGATTTCCAAAATCAAATCCGAGCTGGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp AGGATTACGATCTTCTCCCTGGGAGCAAGCTCGATCTaGTGTACCTTCTTACAGTCAGCGGCACGGACGATC +
Preference number: 6 (lower is better)
Translates to: RITIFSLGASSI*CTFLQSAARTI
Trigger: GATCGTCCGTGCCGCTGACTGTAAGAAGGTACACCAGATCGAGCTTGCTCCCAGGGAGAAGATCGTAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361246.7
ENST00000558867.1
ENST00000559043.1
ENST00000559245.1
CDS CAA 72 bp AGCCTCGAGCTCTTCGGTCATCTTGGAAGCAAGAGCTaGAAGGTAACCCCGGGCATCTTTCTCGTCACTGAC +
Preference number: 6 (lower is better)
Translates to: SLELFGHLGSKS*KVTPGIFLVTD
Trigger: GTCAGTGACGAGAAAGATGCCCGGGGTTACCTTCAAGCTCTTGCTTCCAAGATGACCGAAGAGCTCGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS CCA 72 bp GCCTGGGCCCATGTGGGCCACGTGGTTGAAGTTGGTTaGGTTGGATATCATTTTGGATCTCAATTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: AWAHVGHVVEVG*VGYHFGSQFWV
Trigger: GACCCAGAATTGAGATCCAAAATGATATCCAACCCAACCAACTTCAACCACGTGGCCCACATGGGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 72 bp TTGCTTCACCTTGAGGGCCTCCAGCTCGCTTTCCATTaGCTTGCAGAAGTTCTCGCTGTGCTCACGAAGCTT +
Preference number: 6 (lower is better)
Translates to: LLHLEGLQLAFH*LAEVLAVLTKL
Trigger: AAGCTTCGTGAGCACAGCGAGAACTTCTGCAAGCAAATGGAAAGCGAGCTGGAGGCCCTCAAGGTGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CAA 90 bp ACTCCTCAAAGCCTCGAGCTCTTCGGTCATCTTGGAAGCAAGAGCTaGAAGGTAACCCCGGGCATCTTTCTCGTCACTGACCCACTGAAT +
Preference number: 6 (lower is better)
Translates to: TPQSLELFGHLGSKS*KVTPGIFLVTDPLN
Trigger: ATTCAGTGGGTCAGTGACGAGAAAGATGCCCGGGGTTACCTTCAAGCTCTTGCTTCCAAGATGACCGAAGAGCTCGAGGCTTTGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS TCA 72 bp GAGCTCCACAGCACAAAGGGCATCAAAAGACTGTTGTaGGAGGAACGCAAGCGAGGGGTCATTGGGATTTAC +
Preference number: 6 (lower is better)
Translates to: ELHSTKGIKRLL*EERKRGVIGIY
Trigger: GTAAATCCCAATGACCCCTCGCTTGCGTTCCTCTCACAACAGTCTTTTGATGCCCTTTGTGCTGTGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559245.1
CDS CCA 72 bp GGAGTCCGAATCAGGCTCTTTGTCAAAGTCCTGGTCTaGATCAGACATACTTCTCAGAGGCACAGTCACGCT +
Preference number: 6 (lower is better)
Translates to: GVRIRLFVKVLV*IRHTSQRHSHA
Trigger: AGCGTGACTGTGCCTCTGAGAAGTATGTCTGATCCAGACCAGGACTTTGACAAAGAGCCTGATTCGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp CGCTGGGGTTGGAGCTATTCGATGGAGTTGAGTGTTTaGTGGAGTCCGAATCAGGCTCTTTGTCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: RWGWSYSMELSV*WSPNQALCQSP
Trigger: AGGACTTTGACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp TTGGTGGAGTCCGAATCAGGCTCTTTGTCAAAGTCCTaGTCTGGATCAGACATACTTCTCAGAGGCACAGTC +
Preference number: 6 (lower is better)
Translates to: LVESESGSLSKS*SGSDILLRGTV
Trigger: GACTGTGCCTCTGAGAAGTATGTCTGATCCAGACCAGGACTTTGACAAAGAGCCTGATTCGGACTCCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp TGGGGTTGGAGCTATTCGATGGAGTTGAGTGTTTGGTaGAGTCCGAATCAGGCTCTTTGTCAAAGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: WGWSYSMELSVW*SPNQALCQSPG
Trigger: ACCAGGACTTTGACAAAGAGCCTGATTCGGACTCCACCAAACACTCAACTCCATCGAATAGCTCCAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp ATGAGGTCCTTCGCTTCTTCAGATACATCCGTGACATaGGATGGGAACTGGAATCGCTCTTCATGGTTCATG +
Preference number: 6 (lower is better)
Translates to: MRSFASSDTSVT*DGNWNRSSWFM
Trigger: CATGAACCATGAAGAGCGATTCCAGTTCCCATCCCATGTCACGGATGTATCTGAAGAAGCGAAGGACCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp GTCCTTCGCTTCTTCAGATACATCCGTGACATGGGATaGGAACTGGAATCGCTCTTCATGGTTCATGATCTT +
Preference number: 6 (lower is better)
Translates to: VLRFFRYIRDMG*ELESLFMVHDL
Trigger: AAGATCATGAACCATGAAGAGCGATTCCAGTTCCCATCCCATGTCACGGATGTATCTGAAGAAGCGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS CCA 72 bp GTTGGTTGGGTTGGATATCATTTTGGATCTCAATTCTaGGTCTCTAAGCATCTCTCGCCTCTGCTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: VGWVGYHFGSQF*VSKHLSPLLQS
Trigger: AGACTGCAGCAGAGGCGAGAGATGCTTAGAGACCCAGAATTGAGATCCAAAATGATATCCAACCCAACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp CAAGATTTCTTTCTGCAGGGCCAGCTGGTGGCTTTCTaGATCATGCACCTCCTTCTTCACATTTTTCACTTC +
Preference number: 6 (lower is better)
Translates to: QDFFLQGQLVAF*IMHLLLHIFHF
Trigger: GAAGTGAAAAATGTGAAGAAGGAGGTGCATGATTCAGAAAGCCACCAGCTGGCCCTGCAGAAAGAAATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361246.7
CDS TCA 72 bp AATACCTACAGTGCCATCATCATTCATCTTCAAACATaGTCCAAAGTCAGCCAGGCGGATATGACCATTCAC +
Preference number: 6 (lower is better)
Translates to: NTYSAIIIHLQT*SKVSQADMTIH
Trigger: GTGAATGGTCATATCCGCCTGGCTGACTTTGGATCATGTTTGAAGATGAATGATGATGGCACTGTAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558321.5
CDS CAA 72 bp ACAGCATCGCTCTTTCTCGTTCGTATTTATCTTTTATaGTACCTACTGCCTCCTCCATCTCGTTATGCCGTT +
Preference number: 6 (lower is better)
Translates to: TASLFLVRIYLL*YLLPPPSRYAV
Trigger: AACGGCATAACGAGATGGAGGAGGCAGTAGGTACAATAAAAGATAAATACGAACGAGAAAGAGCGATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1
CDS CAA 90 bp TTTCATCAAACAGCATCGCTCTTTCTCGTTCGTATTTATCTTTTATaGTACCTACTGCCTCCTCCATCTCGTTATGCCGTTCTCGCTTTG +
Preference number: 6 (lower is better)
Translates to: FHQTASLFLVRIYLL*YLLPPPSRYAVLAL
Trigger: CAAAGCGAGAACGGCATAACGAGATGGAGGAGGCAGTAGGTACAATAAAAGATAAATACGAACGAGAAAGAGCGATGCTGTTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361246.7
ENST00000559043.1