RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDC42BPA (Homo sapiens)

Ensembl gene IDs: ENSG00000143776

Ensembl transcript IDs: ENST00000334218.9, ENST00000366764.6, ENST00000366764.7, ENST00000366766.6, ENST00000366766.7, ENST00000366767.7, ENST00000366769.7, ENST00000429440.5, ENST00000441725.1, ENST00000442054.5, ENST00000448940.5, ENST00000466538.1, ENST00000488131.1, ENST00000684580.1

Found 1412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: ESRVVRTPESLSCYC*QPLVAFRPSRRGGG
Trigger: CCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGACACGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 90 bp TCAGCTCCCTGCACATGCCGCAGGCCAGCATGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGTGACACAGACGTGGAGTCACAGACA +
Preference number: 1 (lower is better)
Translates to: SAPCTCRRPAWWPPQ*HAGHLSDTDVESQT
Trigger: TGTCTGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp TCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCTACTaGTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGA +
Preference number: 1 (lower is better)
Translates to: SESRVVRTPESLSCY*CQPLVAFRPSRRGG
Trigger: TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 90 bp CGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGA +
Preference number: 1 (lower is better)
Translates to: RGSESRVVRTPESLS*YCCQPLVAFRPSRR
Trigger: TCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 90 bp GGCCAGAGAGACGGGGGAGTGGAGTGCCCAATTCATTCCCTGTTGTaGTCACCAGACATGGGCTACGGCAAAGTCTGCTCTGAGCGCCCC +
Preference number: 1 (lower is better)
Translates to: GQRDGGVECPIHSLL*SPDMGYGKVCSERP
Trigger: GGGGCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TGCTGGGAGACTGCAGTGGTTGTGATCCCGGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGTTTTGACCTCTGCTCACCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: CWETAVVVIPAKGGK*PCCVCGFDLCSPLL
Trigger: GAGCAGGGGTGAGCAGAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 90 bp GGAGGAATCCAGCTGGAAATGCCACTAACCCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGAGCGCCGTGCTGGGCTCACTCACTC +
Preference number: 1 (lower is better)
Translates to: GGIQLEMPLTPQSST*ERKPVGAPCWAHSL
Trigger: GAGTGAGTGAGCCCAGCACGGCGCTCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGGGGTTAGTGGCATTTCCAGCTGGATTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp GAGACTGCAGTGGTTGTGATCCCGGCCAAAGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGACCTCTGCTCACCCCTGCTCTGGCTT +
Preference number: 1 (lower is better)
Translates to: ETAVVVIPAKGGKWP*CVCGFDLCSPLLWL
Trigger: AAGCCAGAGCAGGGGTGAGCAGAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TCGTCAGAACTCCTGAATCCCTGTCCTGCTACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAA +
Preference number: 1 (lower is better)
Translates to: SSELLNPCPATAASP*WLSGRAGEVEGRDE
Trigger: TTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 90 bp CAGGCCAGCATGGTGGCCACCTCAGTGACACGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACAGACAGCAGCAGTGAAATGATGGCC +
Preference number: 1 (lower is better)
Translates to: QASMVATSVTRRSPQ*HRRGVTDSSSEMMA
Trigger: GGCCATCATTTCACTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCATGCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TCAGAACTCCTGAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGT +
Preference number: 1 (lower is better)
Translates to: SELLNPCPATAASPW*LSGRAGEVEGRDES
Trigger: ACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 90 bp TTCCCTGTTGTGCTCACCAGACATGGGCTACGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGATTGGATGGGGAGCCTTAGGCTTGGC +
Preference number: 1 (lower is better)
Translates to: FPVVLTRHGLRQSLL*APLCLDWMGSLRLG
Trigger: GCCAAGCCTAAGGCTCCCCATCCAATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp CCAGTCGGAGCGCCGTGCTGGGCTCACTCACTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTTCCACTGGCTATGGGGAATAATATT +
Preference number: 1 (lower is better)
Translates to: PVGAPCWAHSLWPAH*GCHIHFPLAMGNNI
Trigger: AATATTATTCCCCATAGCCAGTGGAAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp GGGGAGTGGAGTGCCCAATTCATTCCCTGTTGTGCTCACCAGACATaGGCTACGGCAAAGTCTGCTCTGAGCGCCCCTCTGTCTAGATTG +
Preference number: 1 (lower is better)
Translates to: GEWSAQFIPCCAHQT*ATAKSALSAPLSRL
Trigger: CAATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACTCCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp AATGCAGCTCATCTAGTTCAGGGCTGGGCCAGAGAGACGGGGGAGTaGAGTGCCCAATTCATTCCCTGTTGTGCTCACCAGACATGGGCT +
Preference number: 1 (lower is better)
Translates to: NAAHLVQGWARETGE*SAQFIPCCAHQTWA
Trigger: AGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCTGGCCCAGCCCTGAACTAGATGAGCTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp CAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTaGCCTGTTGGGAGGCTGAAGAGTATGACCCATAGCAGTGGAGCT +
Preference number: 1 (lower is better)
Translates to: QLAWQPRQASVALSL*PVGRLKSMTHSSGA
Trigger: AGCTCCACTGCTATGGGTCATACTCTTCAGCCTCCCAACAGGGCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TGGTGCAATCCATGGGGTGAATATGGACAAGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCCTGTT +
Preference number: 1 (lower is better)
Translates to: WCNPWGEYGQVAQLA*QPRQASVALSLCPV
Trigger: AACAGGGCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGACTTGTCCATATTCACCCCATGGATTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 90 bp AAGCAGGGGGCCGGCTGGCTGACTCCCTTCTCTCACGTGAGGTGCTaGGGACAAGGATCTACCAAGTCATATGACAATGATCCAACTAAA +
Preference number: 1 (lower is better)
Translates to: KQGAGWLTPFSHVRC*GQGSTKSYDNDPTK
Trigger: TTTAGTTGGATCATTGTCATATGACTTGGTAGATCCTTGTCCTCAGCACCTCACGTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp GCTGCTGAAGTGGCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATaGCCCAAACCAGCAAAACCTGGCTCTGCAAGTGTTTTCTACAGC +
Preference number: 1 (lower is better)
Translates to: AAEVASNVKALVPRA*PKPAKPGSASVFYS
Trigger: GCTGTAGAAAACACTTGCAGAGCCAGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGCCACTTCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp AGGTGCTTACAATGGAATCCCCAGCAGGATCCTTTCTTCCCTCACTaGATCTCAGAACCTTCTCCACACAGCAGCATCACCTGGAAACAG +
Preference number: 1 (lower is better)
Translates to: RCLQWNPQQDPFFPH*ISEPSPHSSITWKQ
Trigger: CTGTTTCCAGGTGATGCTGCTGTGTGGAGAAGGTTCTGAGATGCAGTGAGGGAAGAAAGGATCCTGCTGGGGATTCCATTGTAAGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp CTGCATTTGTGCCTATTAGGCATTACCCAGCAGGGTCTGAGACACTaGAGCCACTTGAGAATGCAATGGGCACACGTAAGTGAAGGACAT +
Preference number: 1 (lower is better)
Translates to: LHLCLLGITQQGLRH*SHLRMQWAHVSEGH
Trigger: ATGTCCTTCACTTACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCTAATAGGCACAAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR CCA 90 bp TTGCCATTGCAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATaGGGTGAATATGGACAAGTCGCCCAGTTAGCCTGGCAACCTAGA +
Preference number: 1 (lower is better)
Translates to: LPLQWKNQRVPWCNP*GEYGQVAQLAWQPR
Trigger: TCTAGGTTGCCAGGCTAACTGGGCGACTTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTGCAATGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp CGCATTCGGGACTGCTCTATTATGACTGATGAGATTACTTGCCATTaGAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTG +
Preference number: 1 (lower is better)
Translates to: RIRDCSIMTDEITCH*SGKIKECHGAIHGV
Trigger: CACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCCGAATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTaGTACGGAAAGTCTGTCTTTGTTGTTGCTGTTAGGCTGGGGGCG +
Preference number: 1 (lower is better)
Translates to: KATLSAWNEINVNLS*YGKSVFVVAVRLGA
Trigger: CGCCCCCAGCCTAACAGCAACAACAAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 90 bp TCTGCACGCATTCGGGACTGCTCTATTATGACTGATGAGATTACTTaGCATTGCAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCAT +
Preference number: 1 (lower is better)
Translates to: SARIRDCSIMTDEIT*HCSGKIKECHGAIH
Trigger: ATGGATTGCACCATGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCCGAATGCGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp TTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTaGTCTATTATGACTGATGAGATTACTTGCCATTGCAGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: FSPKALLLESARIRD*SIMTDEITCHCSGK
Trigger: TTTTCCACTGCAATGGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TGTCAAAGCTGTTACATGAAAATTCCCGATTATAGGTGCTTACAATaGAATCCCCAGCAGGATCCTTTCTTCCCTCACTGCATCTCAGAA +
Preference number: 1 (lower is better)
Translates to: CQSCYMKIPDYRCLQ*NPQQDPFFPHCISE
Trigger: TTCTGAGATGCAGTGAGGGAAGAAAGGATCCTGCTGGGGATTCCATTGTAAGCACCTATAATCGGGAATTTTCATGTAACAGCTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 90 bp ATGTTTAAATGTCAAAGCTGTTACATGAAAATTCCCGATTATAGGTaGTTACAATGGAATCCCCAGCAGGATCCTTTCTTCCCTCACTGC +
Preference number: 1 (lower is better)
Translates to: MFKCQSCYMKIPDYR*LQWNPQQDPFFPHC
Trigger: GCAGTGAGGGAAGAAAGGATCCTGCTGGGGATTCCATTGTAAGCACCTATAATCGGGAATTTTCATGTAACAGCTTTGACATTTAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 90 bp TTTGGGAGTAGGGGTAAAATGTTACTGAAAGCAACTCTAAGTGCATaGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTC +
Preference number: 1 (lower is better)
Translates to: FGSRGKMLLKATLSA*NEINVNLSCYGKSV
Trigger: GACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTTCAGTAACATTTTACCCCTACTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 90 bp AGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTaGCAGAATCGTGTATTTCTACATTTATCTGCGGAAGATAAAATA +
Preference number: 1 (lower is better)
Translates to: SYNTPCNLSDGRDQR*QNRVFLHLSAEDKI
Trigger: TATTTTATCTTCCGCAGATAAATGTAGAAATACACGATTCTGTCACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CAA 90 bp CTGGGCCAGAGAGACGGGGGAGTGGAGTGCCCAATTCATTCCCTGTaGTGCTCACCAGACATGGGCTACGGCAAAGTCTGCTCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: LGQRDGGVECPIHSL*CSPDMGYGKVCSER
Trigger: GCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCTGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTGGGCTCACTCACTCTaGCCTGCGCACTGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCWAHSL*PAHWGC
Trigger: ACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: ASNVKALVPRACPKPAKPTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: ASNVKALVPRACPKPAKPLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLWPAH*GCHIHF
Trigger: AAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTCAGTGACACAGACGTaGAGTCACAGACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCSVTQT*SHRQQQ
Trigger: CTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTCAGCTCCCTGCACATaGCGCAGGCCAGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSSAPCT*RRPAWW
Trigger: CCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 2 (lower is better)
Translates to: ASNVKALVPRACPKPAKPAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACA +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSRRSPQ*HRRGVT
Trigger: TGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: ASNVKALVPRACPKPAKPLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTATAGGTGCTTACAATaGAATCCCCAGCAGGATCCT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCYRCLQ*NPQQDP
Trigger: AGGATCCTGCTGGGGATTCCATTGTAAGCACCTATA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTACAGACACCTCGCTGTaGCTTAGGGAGGGACAGGAT +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSTDTSL*LREGQD
Trigger: ATCCTGTCCCTCCCTAAGTCACAGCGAGGTGTCTGT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGCATCCATCTTTTGTTaGATACAAGAGGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCASIFC*IQEAPF
Trigger: AAAAGGAGCCTCTTGTATTCAACAAAAGATGGATGC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGA +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQPQSST*ERKPVG
Trigger: TCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACCAGTCGGAGCGCCGTaGTGGGCTCACTCACTCTGG +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRPVGAP*WAHSLW
Trigger: CCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGGATGGCCTCCTCCCTaGCTGAGAAGAGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQGWPPP*LRREGR
Trigger: TCTCCCTTCTCTTCTCAGGCAGGGAGGAGGCCATCC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGAAGCAGGGGGCCGGCTaGCTGACTCCCTTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGKQGAG*LTPFSH
Trigger: GTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACTGTTAATCTCGGCTTaGGATGGCCTCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQLLISA*DGLLPA
Trigger: GGCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTCTCTCTGCCCTGTTaGGAGGCTGAAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSLSLPC*EAEEYD
Trigger: GTCATACTCTTCAGCCTCCCAACAGGGCAGAGAGAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTATTCTCCCTTCTGGATaGGGAGAAGCCCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSILPSG*GEAHEL
Trigger: TAGCTCATGGGCTTCTCCGCATCCAGAAGGGAGAAT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 2 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 2 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGA +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGPQSST*ERKPVG
Trigger: TCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGG...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGATGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGT +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRWWPPQ*HAGHLS
Trigger: ACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCA...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACACTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACACCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 2 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCA +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQQMLKL*CPGHAP
Trigger: TGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCACATCCATTTTCCACTaGCTATGGGGAATAATATTT +
Preference number: 2 (lower is better)
Translates to: VAQLAWQPRQASVALSLCTSIFH*LWGIIF
Trigger: AAATATTATTCCCCATAGCCAGTGGAAAATGGATGT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTT +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQLWPAH*GCHIHF
Trigger: AAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGCTGTTAATCTCGGCTTaGGATGGCCTCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGLLISA*DGLLPA
Trigger: GGCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAG...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACTCTCTCTGCCCTGTTaGGAGGCTGAAGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQLSLPC*EAEEYD
Trigger: GTCATACTCTTCAGCCTCCCAACAGGGCAGAGAGAG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGGAAGGGATCAGAGGTaGCAGAATCGTGTATTTCTA +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSGRDQR*QNRVFL
Trigger: TAGAAATACACGATTCTGTCACCTCTGATCCCTTCC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGATTCCCCAGGCTTATGTaGAGAAGCCCACGCCCACTC +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRFPRLM*RSPRPL
Trigger: GAGTGGGCGTGGGCTTCTTCACATAAGCCTGGGGAA...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGGAAAAATCAAAGAGTaGCATGGTGCAATCCATGGG +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSGKIKE*HGAIHG
Trigger: CCCATGGATTGCACCATGGCACTCTTTGATTTTTCC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAATCTCGGCTTGGGATaGCCTCCTCCCTGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRNLGLG*PPPCLR
Trigger: TCTCAGGCAGGGAGGAGGCCATCCCAAGCCGAGATT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAACAGACACCTCGCTGTaGCTTAGGGAGGGACAGGAT +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRTDTSL*LREGQD
Trigger: ATCCTGTCCCTCCCTAAGTCACAGCGAGGTGTCTGT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGTCTCACGTGAGGTGCTaGGGACAAGGATCTACCAAG +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGSHVRC*GQGSTK
Trigger: CTTGGTAGATCCTTGTCCTCAGCACCTCACGTGAGA...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGAAGGAGAGAGAGGCTaGGAGCTAGCCAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGEGERG*ELARND
Trigger: ATCATTCCTGGCTAGCTCTCAGCCTCTCTCTCCTTC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp ATCATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTGACACTGCAGCCACTTaGGAATGCAATGGGCACACG +
Preference number: 2 (lower is better)
Translates to: IITICNHICLSPRWPVHSDTAAT*ECNGHT
Trigger: CGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTC...AGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 2 (lower is better)
Translates to: LITYICVICLFKLPLGVGAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRVAQLA*QPRQAS
Trigger: TGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACATTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCAAACCAGCAAAACCTaGCTCTGCAAGTGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGQTSKT*LCKCFL
Trigger: TAGAAAACACTTGCAGAGCCAGGTTTTGCTGGTTTG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTT +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRLWPAH*GCHIHF
Trigger: AAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAAATATAATCAAATCTaGGCTGGCACCAAACTCAGA +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSKYNQI*AGTKLR
Trigger: TCTGAGTTTGGTGCCAGCTCAGATTTGATTATATTT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGATTCATTCCCTGTTGTaGTCACCAGACATGGGCTAC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGIHSLL*SPDMGY
Trigger: GTAGCCCATGTCTGGTGAGCACAACAGGGAATGAAT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGATGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACATGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: KCELEAFPPFTLHYRQETWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGGGACTGCTCTATTATaGCTGATGAGATTACTTGCC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGGTALL*LMRLLA
Trigger: GGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp GATTCATCCCTAACAGCTACCCCTTGTTATTCTCTATTAATGTATGCTGTTTACCAGGGTCTGAGACACTaGAGCCACTTGAGAATGCAA +
Preference number: 2 (lower is better)
Translates to: DSSLTATPCYSLLMYAVYQGLRH*SHLRMQ
Trigger: TTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTG...GTAAACAGCATACATTAATAGAGAATAACAAGGGGTAGCTGTTAGGGATGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAATGGGGAATAATATTTaGTTAAGGCTGTTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQMGNNI*LRLLKP
Trigger: GGGCTTCAACAGCCTTAACCAAATATTATTCCCCAT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTACATCCATTTTCCACTaGCTATGGGGAATAATATTT +
Preference number: 2 (lower is better)
Translates to: CFSPKALLLESARIRDCSTSIFH*LWGIIF
Trigger: AAATATTATTCCCCATAGCCAGTGGAAAATGGATGT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CAA 90 bp AAAGGGAACTCTGATTTCTCTCGCTCTCTCTCTACAAATGTGAGCTaGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: KGNSDFSRSLSTNVS*RPFHPLHYITDKKQ
Trigger: TTGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTTGTAGAGAGAGAGCGAGAGAAATCAGAGTTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAGCAAAACCTGGCTCTaGAAGTGTTTTCTACAGCTC +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRSKTWL*KCFLQL
Trigger: GAGCTGTAGAAAACACTTGCAGAGCCAGGTTTTGCT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACAAAGAGTGCCATGGTaGAATCCATGGGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRQRVPW*NPWGEY
Trigger: ATATTCACCCCATGGATTGCACCATGGCACTCTTTG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACTGCTGCTGCTGAAGTaGCTTCAAATGTTAAAGCTC +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRLLLLK*LQMLKL
Trigger: GAGCTTTAACATTTGAAGCCACTTCAGCAGCAGCAG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGAGCCTTTATCATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATGGCCTCACTTGAGAATGCAATaGGCACACGTAAGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: RAFIITICNHICLSPRWPHLRMQ*AHVSEG
Trigger: TCCTTCACTTACGTGTGCCCATTGCATTCTCAAGTG...AGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGATGATAAAGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAATTCCCGATTATAGGTaGTTACAATGGAATCCCCAG +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRIPDYR*LQWNPQ
Trigger: CTGGGGATTCCATTGTAAGCACCTATAATCGGGAAT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGTCATTATGTTTTCTTTaGCTAGAACCCACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGSLCFL*LEPTPC
Trigger: ACAGGGAGTGGGTTCTAGGCAAAGAAAACATAATGA...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGATAGCCTTAAAGCTGTaGTCCCTAGGAAATAACAGA +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGIALKL*SLGNNR
Trigger: TCTGTTATTTCCTAGGGAGCACAGCTTTAAGGCTAT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGATGGGGAATAATATTTaGTTAAGGCTGTTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGMGNNI*LRLLKP
Trigger: GGGCTTCAACAGCCTTAACCAAATATTATTCCCCAT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAACATCCATTTTCCACTaGCTATGGGGAATAATATTT +
Preference number: 2 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQTSIFH*LWGIIF
Trigger: AAATATTATTCCCCATAGCCAGTGGAAAATGGATGT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR TCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAATAAACCCAGTAGGATaGCCGTTATTTTGGGAAAAC +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRINPVG*PLFWEN
Trigger: GTTTTCCCAAAATAACGGTCATCCTACTGGGTTTAT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGAGATTACTTGCCATTaGAGTGGAAAAATCAAAGAG +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGEITCH*SGKIKE
Trigger: CTCTTTGATTTTTCCACTGCAATGGCAAGTAATCTC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACATCTCATTTCCTTATaGCAACTACAACAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRHLISL*QLQQEE
Trigger: TTCCTCCTGTTGTAGTTGCCATAAGGAAATGAGATG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGATACTTGCCATTGCAGTaGAAAAATCAAAGAGTGCCA +
Preference number: 2 (lower is better)
Translates to: STNMISQNLRVDNLAGHRYLPLQ*KNQRVP
Trigger: TGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTA...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGGAAAACCAAATAGATaGGCTCCTTTTAGTTGTATC +
Preference number: 2 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGGKPNR*APFSCI
Trigger: GATACAACTAAAAGGAGCCCATCTATTTGGTTTTCC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR GCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGAACGTTAATCTAAGCTaGTACGGAAAGTCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: LITYICVICLFKLPLGVGNVNLS*YGKSVF
Trigger: AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTT...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 2 (lower is better)
Translates to: LITYICVICLFKLPLGVGATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 72 bp TGGCAAGGCCTACCTGCTGGGAGACTGCAGTGGTTGTaGTCCCGGCCAAAGGCGGCAAATGGCCCTGCTGCG +
Preference number: 3 (lower is better)
Translates to: WQGLPAGRLQWL*SRPKAANGPAA
Trigger: CGCAGCAGGGCCATTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp CTGAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: LNPCPATAASPW*LSGRAGEVEGR
Trigger: TCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR TCA 72 bp TGCACATGCCGCAGGCCAGCATGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGTGACACAGACGTGGAG +
Preference number: 3 (lower is better)
Translates to: CTCRRPAWWPPQ*HAGHLSDTDVE
Trigger: CTCCACGTCTGTGTCACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCATGCTGGCCTGCGGCATGTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp GTCGTCAGAACTCCTGAATCCCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGA +
Preference number: 3 (lower is better)
Translates to: VVRTPESLSCYC*QPLVAFRPSRR
Trigger: TCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 72 bp CGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCTACTaGTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGG +
Preference number: 3 (lower is better)
Translates to: RVVRTPESLSCY*CQPLVAFRPSR
Trigger: CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR CCA 72 bp GCGCCGTGCTGGGCTCACTCACTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTTCCACTGGCTATGGGG +
Preference number: 3 (lower is better)
Translates to: APCWAHSLWPAH*GCHIHFPLAMG
Trigger: CCCCATAGCCAGTGGAAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCAGCACGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 72 bp CAGCTGGAAATGCCACTAACCCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGAGCGCCGTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QLEMPLTPQSST*ERKPVGAPCWA
Trigger: AGCCCAGCACGGCGCTCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGGGGTTAGTGGCATTTCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp GAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCG +
Preference number: 3 (lower is better)
Translates to: ESRVVRTPESLS*YCCQPLVAFRP
Trigger: CGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACGACACGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 72 bp GTGGTTGTGATCCCGGCCAAAGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGACCTCTGCTCACCCCTG +
Preference number: 3 (lower is better)
Translates to: VVVIPAKGGKWP*CVCGFDLCSPL
Trigger: CAGGGGTGAGCAGAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGCCGGGATCACAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp AAGCCAGTCGGAGCGCCGTGCTGGGCTCACTCACTCTaGCCTGCGCACTGGGGTTGTCACATCCATTTTCCA +
Preference number: 3 (lower is better)
Translates to: KPVGAPCWAHSL*PAHWGCHIHFP
Trigger: TGGAAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp AGCCTTAGGCTTGGCAAGGCCTACCTGCTGGGAGACTaGAGTGGTTGTGATCCCGGCCAAAGGCGGCAAATG +
Preference number: 3 (lower is better)
Translates to: SLRLGKAYLLGD*SGCDPGQRRQM
Trigger: CATTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCAAGCCTAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 72 bp GTGCTCACCAGACATGGGCTACGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGATTGGATGGGGAGCCTT +
Preference number: 3 (lower is better)
Translates to: VLTRHGLRQSLL*APLCLDWMGSL
Trigger: AAGGCTCCCCATCCAATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp ATTGGATGGGGAGCCTTAGGCTTGGCAAGGCCTACCTaGTGGGAGACTGCAGTGGTTGTGATCCCGGCCAAA +
Preference number: 3 (lower is better)
Translates to: IGWGALGLARPT*WETAVVVIPAK
Trigger: TTTGGCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCAAGCCTAAGGCTCCCCATCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp ACTGCAGTGGTTGTGATCCCGGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGTTTTGACCTCTGCTCA +
Preference number: 3 (lower is better)
Translates to: TAVVVIPAKGGK*PCCVCGFDLCS
Trigger: TGAGCAGAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGTCTGTCTTTGTTGTaGCTGTTAGGCTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSSLSLL*LLGWGR
Trigger: ACGCCCCCAGCCTAACAGCAACAACAAAGACAGACT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 72 bp GACGGGGGAGTGGAGTGCCCAATTCATTCCCTGTTGTaGTCACCAGACATGGGCTACGGCAAAGTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: DGGVECPIHSLL*SPDMGYGKVCS
Trigger: AGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACTCCACTCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp AGTGCCCAATTCATTCCCTGTTGTGCTCACCAGACATaGGCTACGGCAAAGTCTGCTCTGAGCGCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SAQFIPCCAHQT*ATAKSALSAPL
Trigger: CAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAATTGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCAGTCTGTCTTTGTTGTaGCTGTTAGGCTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPSLSLL*LLGWGR
Trigger: ACGCCCCCAGCCTAACAGCAACAACAAAGACAGACT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 72 bp GCTACCTCGGGACCTTTGGACATGCGTGGAATGTCCTaGCTCAGCCCCTTCTTAAACGGTGGTAAATGGGAG +
Preference number: 3 (lower is better)
Translates to: ATSGPLDMRGMS*LSPFLNGGKWE
Trigger: CTCCCATTTACCACCGTTTAAGAAGGGGCTGAGGCAGGACATTCCACGCATGTCCAAAGGTCCCGAGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CAA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCACGGAAAGTCTGTCTTaGTTGTTGCTGTTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSTESLS*LLLLGW
Trigger: CCAGCCTAACAGCAACAACAAAGACAGACTTTCCGT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR GCA 72 bp TGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTaGCCTGTTGGGAGGCTGAAGAGTATGACCCATAGC +
Preference number: 3 (lower is better)
Translates to: WQPRQASVALSL*PVGRLKSMTHS
Trigger: GCTATGGGTCATACTCTTCAGCCTCCCAACAGGGCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp CTGCTGCTGCTGAAGTGGCTTCAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTG +
Preference number: 3 (lower is better)
Translates to: LLLLKWLQMLKL*CPGHAPNQQNL
Trigger: CAGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGCCACTTCAGCAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp CCATGGGGTGAATATGGACAAGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: PWGEYGQVAQLA*QPRQASVALSL
Trigger: GAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGACTTGTCCATATTCACCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 72 bp GCCGGCTGGCTGACTCCCTTCTCTCACGTGAGGTGCTaGGGACAAGGATCTACCAAGTCATATGACAATGAT +
Preference number: 3 (lower is better)
Translates to: AGWLTPFSHVRC*GQGSTKSYDND
Trigger: ATCATTGTCATATGACTTGGTAGATCCTTGTCCTCAGCACCTCACGTGAGAGAAGGGAGTCAGCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp GCTACGGAAAGTCTGTCTTTGTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACT +
Preference number: 3 (lower is better)
Translates to: ATESLSLLLLLG*GRGSESRVVRT
Trigger: AGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAACAAAGACAGACTTTCCGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CAA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAGTCTGTCTTTGTTGTaGCTGTTAGGCTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: ASNVKALVPRACPKPAKPSLSLL*LLGWGR
Trigger: ACGCCCCCAGCCTAACAGCAACAACAAAGACAGACT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCATTTGGTTAAGGCTGTaGAAGCCCTTGCTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: VAQLAWQPRQASVALSLCIWLRL*KPLLLR
Trigger: CCTCAAAAGCAAGGGCTTCAACAGCCTTAACCAAAT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGCCTGCGCACTGGGGTaGTCACATCCATTTTCCACT +
Preference number: 3 (lower is better)
Translates to: CFSPKALLLESARIRDCSACALG*SHPFST
Trigger: AGTGGAAAATGGATGTGACAACCCCAGTGCGCAGGC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp TTCCATTGGGACCACTCTAGGAGTCTCCTATCTGGATaGTGGCTTCCACTCTTCCTGCCTCTAGTCCATTCT +
Preference number: 3 (lower is better)
Translates to: FHWDHSRSLLSG*WLPLFLPLVHS
Trigger: AGAATGGACTAGAGGCAGGAAGAGTGGAAGCCAGCATCCAGATAGGAGACTCCTAGAGTGGTCCCAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CAA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGTCTGTCTTTGTTGTaGCTGTTAGGCTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: CFSPKALLLESARIRDCSSLSLL*LLGWGR
Trigger: ACGCCCCCAGCCTAACAGCAACAACAAAGACAGACT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR TCA 72 bp GAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTaGATATGGACAAGTCGCCCAGTTAGCCTGGCAACC +
Preference number: 3 (lower is better)
Translates to: EKSKSAMVQSMG*IWTSRPVSLAT
Trigger: GGTTGCCAGGCTAACTGGGCGACTTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp CTTGGTCTTCAAGTCCCTGCTGGTCTGACCCTTACCTaGTACCCCGCTCTAATTTTTGTTACTTCCTCACCA +
Preference number: 3 (lower is better)
Translates to: LGLQVPAGLTLT*YPALIFVTSSP
Trigger: TGGTGAGGAAGTAACAAAAATTAGAGCGGGGTAGCAGGTAAGGGTCAGACCAGCAGGGACTTGAAGACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR CCA 72 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATaGGGTGAATATGGACAAGTCGCCCAGTTAGCCTGG +
Preference number: 3 (lower is better)
Translates to: QWKNQRVPWCNP*GEYGQVAQLAW
Trigger: CCAGGCTAACTGGGCGACTTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGCCTGCGCACTGGGGTaGTCACATCCATTTTCCACT +
Preference number: 3 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQACALG*SHPFST
Trigger: AGTGGAAAATGGATGTGACAACCCCAGTGCGCAGGC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGCCTGTTAATCTCGGCTaGGGATGGCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGPVNLG*GWPPPC
Trigger: GCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAGG...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGAAGACACTGCAGCCACTaGAGAATGCAATGGGCACAC +
Preference number: 3 (lower is better)
Translates to: NHICLSPRWPVHSRRTLGRHCSH*RMQWAH
Trigger: GTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCT...TCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CAA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTGGCAACAATCAGGTaGATACTCACTGCGTTTGCT +
Preference number: 3 (lower is better)
Translates to: CFSPKALLLESARIRDCSLATIR*ILTAFA
Trigger: AGCAAACGCAGTGAGTATCAACCTGATTGTTGCCAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCTGGCAACAATCAGGTaGATACTCACTGCGTTTGCT +
Preference number: 3 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGLATIR*ILTAFA
Trigger: AGCAAACGCAGTGAGTATCAACCTGATTGTTGCCAG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTATATGCATCCATCTTTaGTTGAATACAAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: ASNVKALVPRACPKPAKPICIHL*LNTRGS
Trigger: GGAGCCTCTTGTATTCAACAAAAGATGGATGCATAT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTCTACAAATGTGAGCTaGAGGCCTTTCCACCCTTTA +
Preference number: 3 (lower is better)
Translates to: CFSPKALLLESARIRDCSSTNVS*RPFHPL
Trigger: TAAAGGGTGGAAAGGCCTCAAGCTCACATTTGTAGA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGGAAAAGAAACATCTaGGGTAGAGATGAGTTCGCC +
Preference number: 3 (lower is better)
Translates to: CFSPKALLLESARIRDCSRKRNI*GRDEFA
Trigger: GGCGAACTCATCTCTACCCAAGATGTTTCTTTTCCT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp TACTTGCCATTGCAGTGGAAAAATCAAAGAGTGCCATaGTGCAATCCATGGGGTGAATATGGACAAGTCGCC +
Preference number: 3 (lower is better)
Translates to: YLPLQWKNQRVP*CNPWGEYGQVA
Trigger: GGCGACTTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCACGGAAAGTCTGTCTTaGTTGTTGCTGTTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESTESLS*LLLLGW
Trigger: CCAGCCTAACAGCAACAACAAAGACAGACTTTCCGT...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CAA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTAGGAAAAGAAACATCTaGGGTAGAGATGAGTTCGCC +
Preference number: 3 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGRKRNI*GRDEFA
Trigger: GGCGAACTCATCTCTACCCAAGATGTTTCTTTTCCT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp CATAAGGAAAGAGATTTTAAAATGGGCTCCATGAAATaGAGCTCATCTAGTTCAGGGCTGGGCCAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: HKERDFKMGSMK*SSSSSGLGQRD
Trigger: GTCTCTCTGGCCCAGCCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAGTCTGTCTTTGTTGTaGCTGTTAGGCTGGGGGCGT +
Preference number: 3 (lower is better)
Translates to: STNMISQNLRVDNLAGHRSLSLL*LLGWGR
Trigger: ACGCCCCCAGCCTAACAGCAACAACAAAGACAGACT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAATTTGGTTAAGGCTGTaGAAGCCCTTGCTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQIWLRL*KPLLLR
Trigger: CCTCAAAAGCAAGGGCTTCAACAGCCTTAACCAAAT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp AAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTaGTCTATTATGACTGATGAGATTACTTGCCATTGC +
Preference number: 3 (lower is better)
Translates to: KALLLESARIRD*SIMTDEITCHC
Trigger: GCAATGGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp TGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTaGGACTATTTTCTTAACAACTGCATTTGTGCCTAT +
Preference number: 3 (lower is better)
Translates to: CLPDGLYTLEGL*DYFLNNCICAY
Trigger: ATAGGCACAAATGCAGTTGTTAAGAAAATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CAA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCCTATTTAAGCTACCTTaGGGAGTAGGGGTAAAATGT +
Preference number: 3 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESLFKLP*GVGVKC
Trigger: ACATTTTACCCCTACTCCCAAAGGTAGCTTAAATAG...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CAA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAATATGCATCCATCTTTaGTTGAATACAAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQICIHL*LNTRGS
Trigger: GGAGCCTCTTGTATTCAACAAAAGATGGATGCATAT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGATTTGGTTAAGGCTGTaGAAGCCCTTGCTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGIWLRL*KPLLLR
Trigger: CCTCAAAAGCAAGGGCTTCAACAGCCTTAACCAAAT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGAGGATGACCGTTATTTaGGGAAAACCCTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGRMTVI*GKPSPK
Trigger: TTTTGGGGAGGGTTTTCCCAAAATAACGGTCATCCT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGTCATTATGTTTTCTTaGCCTAGAACCCACTCCCTG +
Preference number: 3 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGVIMFS*PRTHSL
Trigger: CAGGGAGTGGGTTCTAGGCAAAGAAAACATAATGAC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp TGTCAAAGCTGTTACATGAAAATTCCCGATTATAGGTaGTTACAATGGAATCCCCAGCAGGATCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: CQSCYMKIPDYR*LQWNPQQDPFF
Trigger: GAAGAAAGGATCCTGCTGGGGATTCCATTGTAAGCACCTATAATCGGGAATTTTCATGTAACAGCTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCACGGAAAGTCTGTCTTaGTTGTTGCTGTTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: KPMSYFRTIMRLYCESKITESLS*LLLLGW
Trigger: CCAGCCTAACAGCAACAACAAAGACAGACTTTCCGT...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR-3UTR CAA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAGGAAAAGAAACATCTaGGGTAGAGATGAGTTCGCC +
Preference number: 3 (lower is better)
Translates to: STNMISQNLRVDNLAGHRRKRNI*GRDEFA
Trigger: GGCGAACTCATCTCTACCCAAGATGTTTCTTTTCCT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAGGATGACCGTTATTTaGGGAAAACCCTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: STNMISQNLRVDNLAGHRRMTVI*GKPSPK
Trigger: TTTTGGGGAGGGTTTTCCCAAAATAACGGTCATCCT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR-3UTR CAA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAGGCTGTTGAAGCCCTaGCTTTTGAGGTTTTACATT +
Preference number: 3 (lower is better)
Translates to: STNMISQNLRVDNLAGHRRLLKP*LLRFYI
Trigger: AATGTAAAACCTCAAAAGCAAGGGCTTCAACAGCCT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR GCA 72 bp CTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTaGTACGGAAAGTCTGTCTTTGTTGTTGCTGTTAGG +
Preference number: 3 (lower is better)
Translates to: LSAWNEINVNLS*YGKSVFVVAVR
Trigger: CCTAACAGCAACAACAAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
3UTR CCA 72 bp ATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATaGCCTGTACACTCTAGAAGGACTCTGGGACTATTT +
Preference number: 3 (lower is better)
Translates to: ITICNHICLSPR*PVHSRRTLGLF
Trigger: AAATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
3UTR-3UTR CAA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACTATTTAAGCTACCTTaGGGAGTAGGGGTAAAATGT +
Preference number: 3 (lower is better)
Translates to: STNMISQNLRVDNLAGHRLFKLP*GVGVKC
Trigger: ACATTTTACCCCTACTCCCAAAGGTAGCTTAAATAG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CCA 72 bp AGGGGTAAAATGTTACTGAAAGCAACTCTAAGTGCATaGAATGAAATCAACGTTAATCTAAGCTGCTACGGA +
Preference number: 3 (lower is better)
Translates to: RGKMLLKATLSA*NEINVNLSCYG
Trigger: TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTTCAGTAACATTTTACCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334218.9
ENST00000366764.6
ENST00000366766.6
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCTCGCGCTCGCGCCCTaGGCTCAGCGAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLALAP*AQRGSS
Trigger: GGAGGAGCCTCGCTGAGCCCAGGGCGCGAGCGCGAG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGCGTGCTGCCAGTGCTaGGGGGCAGGGCTTACACTC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQACCQC*GAGLTL
Trigger: GAGTGTAAGCCCTGCCCCCCAGCACTGGCAGCACGC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGGAGAAGCGGCTACTTaGCCGCCCGAGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQGEAAT*PPEPTP
Trigger: TGGAGTGGGCTCGGGCGGCCAAGTAGCCGCTTCTCC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAGCTCCCGCGGTCAGTaGTCTCCAGGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQSSRGQ*SPGRGS
Trigger: AGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQWWPPQ*HAGHLS
Trigger: ACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGGGGGCGAGGTCCCTaGAGCAGCCCCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSRGRGP*SSPSAR
Trigger: CCGAGCCGAGGGGCTGCTTCAGGGACCTCGCCCCCT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCCAGTCGGAGCGCCGTaGTGGGCTCACTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRPVGAP*WAHSLW
Trigger: CCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATCAGCTCCCTGCACATaGCGCAGGCCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGSAPCT*RRPAWW
Trigger: CCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAAAGCAGGGGGCCGGCTaGCTGACTCCCTTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGKQGAG*LTPFSH
Trigger: GTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGGCTGCGGGCGGCACTaGCACCGGGCTCCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSGCGRH*HRAPEK
Trigger: CTTCTCCGGAGCCCGGTGCCAGTGCCGCCCGCAGCC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAACTGTCCGACTTTCCTaGGGCCGAGGGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGTVRLS*GRGFMG
Trigger: GCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGGATGGCCTCCTCCCTaGCTGAGAAGAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQGWPPP*LRREGR
Trigger: TCTCCCTTCTCTTCTCAGGCAGGGAGGAGGCCATCC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGCATGGGCTGCCGCTTaGCACTGTAGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGAWAAA*HCSFLQ
Trigger: CTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAAGCATCTCCAGCCCTaGGACAGACACCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQKHLQP*DRHLAV
Trigger: CACAGCGAGGTGTCTGTCCCAGGGCTGGAGATGCTT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACATCTAGTTCAGGGCTaGGCCAGAGAGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGHLVQG*ARETGE
Trigger: CTCCCCCGTCTCTCTGGCCCAGCCCTGAACTAGATG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGCACGGTGTCCTGTGTaGGGAGGGCCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEARCPV*GGPSVL
Trigger: CAGCACGCTGGGCCCTCCCCACACAGGACACCGTGC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACACTGCCCATTGGTCTaGGCGGGCCCGTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGHCPLV*AGPSKI
Trigger: TATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGACAGACACCTCGCTGTaGCTTAGGGAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQTDTSL*LREGQD
Trigger: ATCCTGTCCCTCCCTAAGTCACAGCGAGGTGTCTGT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGACCGTGACTGGATGTaGAACTTGACGCTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQDRDWM*NLTLGF
Trigger: GAACCCGAGCGTCAAGTTTCACATCCAGTCACGGTC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442054.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGGCAAATGGCCCTGCTaGGTCTGTGGTTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQGKWPC*VCGFDL
Trigger: GAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGCATGGGCTGCCGCTTaGCACTGTAGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRAWAAA*HCSFLQ
Trigger: CTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGGGGGCTGCTTAGGTTaGAACTGTTGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQGGCLG*NCWKLW
Trigger: CCACAGCTTCCAACAGTTCCAACCTAAGCAGCCCCC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACTGTTAATCTCGGCTTaGGATGGCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGLLISA*DGLLPA
Trigger: GGCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCATCTAGTTCAGGGCTaGGCCAGAGAGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRHLVQG*ARETGE
Trigger: CTCCCCCGTCTCTCTGGCCCAGCCCTGAACTAGATG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRRRSPQ*HRRGVT
Trigger: TGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCACTTCCTTGGTCCATaGCTCCAGAGGACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQHFLGP*LQRTKS
Trigger: GCTCTTTGTCCTCTGGAGGCATGGACCAAGGAAGTG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTGGAAGCTGTGGAATaGCTCGGAGAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLEAVE*LGESES
Trigger: GGACTCTGACTCTCCGAGGCATTCCACAGCTTCCAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTACCTGCTGGGAGACTaGAGTGGTTGTGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRYLLGD*SGCDPG
Trigger: GCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTCTGCCTTTGCTAGCTaGAGTACAGGATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQSAFAS*STGWRA
Trigger: CGCTCTCCATCCTGTACTCCAGCTAGCAAAGGCAGA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334218.9
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGAGGCCGAGGGTTCATaGGCAGATCTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQEAEGS*ADLSGS
Trigger: AGATCCTGAAAGATCTGCCCATGAACCCTCGGCCTC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCTGACGGGGAGGGCATaGGCTGCCGCTTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPLTGRA*AAAWHC
Trigger: ACAGTGCCAAGCGGCAGCCCATGCCCTCCCCGTCAG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGGGGCATCACTTCCTTaGTCCATGCCTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRGASLP*SMPPED
Trigger: GTCCTCTGGAGGCATGGACCAAGGAAGTGATGCCCC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGGGCTGCTTAGGTTaGAACTGTTGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGGGCLG*NCWKLW
Trigger: CCACAGCTTCCAACAGTTCCAACCTAAGCAGCCCCC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESETAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTGTTGCTGTTAGGCTaGGGGCGTGGATCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLLLLG*GRGSES
Trigger: ACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGVAQLA*QPRQAS
Trigger: TGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCGTGCTGCCAGTGCTaGGGGGCAGGGCTTACACTC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPACCQC*GAGLTL
Trigger: GAGTGTAAGCCCTGCCCCCCAGCACTGGCAGCACGC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCACGGTGTCCTGTGTaGGGAGGGCCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPARCPV*GGPSVL
Trigger: CAGCACGCTGGGCCCTCCCCACACAGGACACCGTGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAAACATCAAGATCCAGTaGGGTGGGACCAGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGNIKIQ*GGTSRN
Trigger: GTTACGGCTGGTCCCACCTCACTGGATCTTGATGTT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGACTGTCCGACTTTCCTaGGGCCGAGGGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESETVRLS*GRGFMG
Trigger: GCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGAAGGAGAGAGAGGCTaGGAGCTAGCCAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGEGERG*ELARND
Trigger: ATCATTCCTGGCTAGCTCTCAGCCTCTCTCTCCTTC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGAGACTGCAGTGGTTGTaGTCCCGGCCAAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESERLQWL*SRPKAA
Trigger: TGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACCCTCTTTAATGCGCTaGCATTCTGTGCGGATGACC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGPSLMR*HSVRMT
Trigger: GGTCATCCGCACAGAATGGCAGCGCATTAAAGAGGG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESELSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATTCTCCCTTCTGGATaGGGAGAAGCCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQILPSG*GEAHEL
Trigger: TAGCTCATGGGCTTCTCCGCATCCAGAAGGGAGAAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCCAGTCGGAGCGCCGTaGTGGGCTCACTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPPVGAP*WAHSLW
Trigger: CCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTACAGCCTCAGCTCCCTaGACATGCCGCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPTASAP*TCRRPA
Trigger: TGCTGGCCTGCGGCATGTGCAGGGAGCTGAGGCTGT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGGTGGACAGAAGGGGTaGGAGCTGGTCACGAGCACC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPGGQKG*ELVTST
Trigger: GGTGCTCGTGACCAGCTCGCACCCCTTCTGTCCACC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGTAGCTCTCTCTCTCTaGCCTGTTGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRVALSL*PVGRLK
Trigger: CTTCAGCCTCCCAACAGGGCAGAGAGAGAGAGCTAC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTGGCAAGGCCTACCTaGTGGGAGACTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLARPT*WETAVV
Trigger: AACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGACGGGGGAGTGGAGTaGCCAATTCATTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRDGGVE*PIHSLL
Trigger: CAACAGGGAATGAATTGGGCACTCCACTCCCCCGTC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGAGAGAGACGGGGGAGTaGAGTGCCCAATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRRETGE*SAQFIP
Trigger: GGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCACAGAGTTGTTCACTaGAGATTGCCATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQHRVVH*RLPSTG
Trigger: TCCAGTGGATGGCAATCTTCAGTGAACAACTCTGTG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACCTCTTCTGGGACTCTaGAGGAATAACGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGPLLGL*RNNAAY
Trigger: ATAAGCGGCGTTATTCCTTCAGAGTCCCAGAAGAGG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTACTGTCCGACTTTCCTaGGGCCGAGGGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPTVRLS*GRGFMG
Trigger: GCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAGATGGAATACTGACTaGGCCACTGAATACTGTCCG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQRWNTD*ATEYCP
Trigger: CGGACAGTATTCAGTGGCTCAGTCAGTATTCCATCT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPWWPPQ*HAGHLS
Trigger: ACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESERQSLL*APLCLD
Trigger: ATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCCAGGGCATATCTGTTaGTCGTGTACCCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRPGHIC*SCTQAG
Trigger: TCCAGCTTGGGTACACGAGCAACAGATATGCCCTGG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAATTCTCCCTTCTGGATaGGGAGAAGCCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGILPSG*GEAHEL
Trigger: TAGCTCATGGGCTTCTCCGCATCCAGAAGGGAGAAT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTCAGCTCCCTGCACATaGCGCAGGCCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCSAPCT*RRPAWW
Trigger: CCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGGTGGACAGAAGGGGTaGGAGCTGGTCACGAGCACC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCGGQKG*ELVTST
Trigger: GGTGCTCGTGACCAGCTCGCACCCCTTCTGTCCACC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGGATGGCCTCCTCCCTaGCTGAGAAGAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEGWPPP*LRREGR
Trigger: TCTCCCTTCTCTTCTCAGGCAGGGAGGAGGCCATCC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGGCTACGGCAAAGTCTaGTCTGAGCGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPGYGKV*SERPSV
Trigger: GACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTACTCATGGAGCGGCCTaGCTCAGGGCGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPTHGAA*LRAGFG
Trigger: ACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCATGGGCTGCCGCTTaGCACTGTAGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPAWAAA*HCSFLQ
Trigger: CTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAAACTGTTGGAAGCTGTaGAATGCCTCGGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGNCWKL*NASESQ
Trigger: CTGACTCTCCGAGGCATTCCACAGCTTCCAACAGTT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTAGGTTGGAACTGTTaGAAGCTGTGGAATGCCTCG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLGWNC*KLWNAS
Trigger: CGAGGCATTCCACAGCTTCCAACAGTTCCAACCTAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPAKGGK*PCCVCG
Trigger: ACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATGTGGAAGGAGATGTaGACCGTGACTGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQMWKEM*TVTGCE
Trigger: TTCACATCCAGTCACGGTCCACATCTCCTTCCACAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442054.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTAGAAGCTAAGGCCTaGAGATACCCTCGTGCATCC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLEAKA*RYPRAS
Trigger: GGATGCACGAGGGTATCTTCAGGCCTTAGCTTCTAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACTTAAGGTTGGTGTGTaGACTGAAAGTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGLKVGV*TESGVE
Trigger: CTCCACTCCACTTTCAGTTCACACACCAACCTTAAG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCCAGAAGTTACGGTTTaGCACCCTTTAGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQPEVTV*HPLVSD
Trigger: GTCAGAAACTAAAGGGTGTCAAACCGTAACTTCTGG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGGAAGGGATCAGAGGTaGCAGAATCGTGTATTTCTA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQGRDQR*QNRVFL
Trigger: TAGAAATACACGATTCTGTCACCTCTGATCCCTTCC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGACAGACACCTCGCTGTaGCTTAGGGAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESETDTSL*LREGQD
Trigger: ATCCTGTCCCTCCCTAAGTCACAGCGAGGTGTCTGT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSPQSST*ERKPVG
Trigger: TCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSRRSPQ*HRRGVT
Trigger: TGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAGACTGCAGTGGTTGTaGTCCCGGCCAAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCRLQWL*SRPKAA
Trigger: TGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATAAACTGCTCCAACTaGCTCAAACGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQINCSN*LKRTSP
Trigger: TGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATGGTGGCCAGAAAATaGAGTATGTGTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRMVARK*SMCWWG
Trigger: CCCCCACCAACACATACTGCATTTTCTGGCCACCAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATTCTCCCTTCTGGATaGGGAGAAGCCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRILPSG*GEAHEL
Trigger: TAGCTCATGGGCTTCTCCGCATCCAGAAGGGAGAAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGTAGCTCTCTCTCTCTaGCCTGTTGGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEVALSL*PVGRLK
Trigger: CTTCAGCCTCCCAACAGGGCAGAGAGAGAGAGCTAC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTACCTGCTGGGAGACTaGAGTGGTTGTGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSYLLGD*SGCDPG
Trigger: GCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGAATACTGCAGAGCTTaGACAGTCTGTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQEYCRA*TVCVDS
Trigger: AGAGTCAACACAGACTGTCCAAGCTCTGCAGTATTC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCTTGGATGGCCTGTTTaGCTCTTATTTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLGWPV*LLFLHP
Trigger: TGGATGCAGAAATAAGAGCCAAACAGGCCATCCAAG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCATGGGCTGCCGCTTaGCACTGTAGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPAWAAA*HCSFLQ
Trigger: CTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGCATGGGCTGCCGCTTaGCACTGTAGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESAWAAA*HCSFLQ
Trigger: CTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGGGGCATCACTTCCTTaGTCCATGCCTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPGASLP*SMPPED
Trigger: GTCCTCTGGAGGCATGGACCAAGGAAGTGATGCCCC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGGGGGCTGCTTAGGTTaGAACTGTTGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEGGCLG*NCWKLW
Trigger: CCACAGCTTCCAACAGTTCCAACCTAAGCAGCCCCC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAATCTCGGCTTGGGATaGCCTCCTCCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSNLGLG*PPPCLR
Trigger: TCTCAGGCAGGGAGGAGGCCATCCCAAGCCGAGATT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCTGTTAATCTCGGCTTaGGATGGCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPLLISA*DGLLPA
Trigger: GGCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAATCAAAGAGTGCCATaGTGCAATCCATGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQNQRVP*CNPWGE
Trigger: TTCACCCCATGGATTGCACCATGGCACTCTTTGATT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCGGCGCGGGCGGCTCTaGCAGCTACTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPRRGRL*QLLLPL
Trigger: AAGGGGGAGAAGTAGCTGCCAGAGCCGCCCGCGCCG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCACTGCCCATTGGTCTaGGCGGGCCCGTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCHCPLV*AGPSKI
Trigger: TATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGATGGCCAGTTTCCTCTaGCAGTGTGCGTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEMASFL*QCASFS
Trigger: GCTGAAAGACGCACACTGTCAGAGGAAACTGGCCAT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCATCCTTTTCATCGCTaGCCCACTGAATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQHPFHR*PTELFL
Trigger: CAGAAATAATTCAGTGGGTCAGCGATGAAAAGGATG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGGAGAGCGTTCAAATTaGTCCAGAGCATCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEGERSN*SRASVG
Trigger: GCCTACCGATGCTCTGGATCAATTTGAACGCTCTCC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334218.9
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTCTTTCATGATCTATaGTTGCGGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRFFHDL*LRLPGL
Trigger: CAACCCAGGCAGCCGCAATCATAGATCATGAAAGAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTCCCCAGGCTTATGTaGAGAAGCCCACGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESFPRLM*RSPRPL
Trigger: GAGTGGGCGTGGGCTTCTTCACATAAGCCTGGGGAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCPQSST*ERKPVG
Trigger: TCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTCTCACGTGAGGTGCTaGGGACAAGGATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESESHVRC*GQGSTK
Trigger: CTTGGTAGATCCTTGTCCTCAGCACCTCACGTGAGA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCTGAAGATACCCTCGTaGATCCTTTTCATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLKIPS*ILFIAD
Trigger: GTCAGCGATGAAAAGGATGCACGAGGGTATCTTCAG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGACACACTATAGCCAGTaGTCTCTGCCACCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRTHYSQ*SLPPFL
Trigger: AAGAAAGGGTGGCAGAGAGCACTGGCTATAGTGTGT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATCTATGATTGCGGCTaGCTGGGTTGTTTTAATGAG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQIYDCG*LGCFNE
Trigger: CTCATTAAAACAACCCAGGCAGCCGCAATCATAGAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCCCTCTTTAATGCGCTaGCATTCTGTGCGGATGACC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEPSLMR*HSVRMT
Trigger: GGTCATCCGCACAGAATGGCAGCGCATTAAAGAGGG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACAAAGAGTGCCATGGTaGAATCCATGGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGQRVPW*NPWGEY
Trigger: ATATTCACCCCATGGATTGCACCATGGCACTCTTTG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGAAAAATCAAAGAGTaGCATGGTGCAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGGKIKE*HGAIHG
Trigger: CCCATGGATTGCACCATGGCACTCTTTGATTTTTCC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTGTGGTTTTGACCTCTaGTCACCCCTGCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESECGFDL*SPLLWL
Trigger: AAGCCAGAGCAGGGGTGAGCAGAGGTCAAAACCACA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESGGKWP*CVCGFD
Trigger: GTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTACCTGCTGGGAGACTaGAGTGGTTGTGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESYLLGD*SGCDPG
Trigger: GCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTACCTGCTGGGAGACTaGAGTGGTTGTGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCYLLGD*SGCDPG
Trigger: GCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTGGCAAGGCCTACCTaGTGGGAGACTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLARPT*WETAVV
Trigger: AACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGACGGGGGAGTGGAGTaGCCAATTCATTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPDGGVE*PIHSLL
Trigger: CAACAGGGAATGAATTGGGCACTCCACTCCCCCGTC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCTTTTCCATCTTCCATaGCTTGAAGGATTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLFHLP*LEGFQE
Trigger: CTCCTGAAATCCTTCAAGCCATGGAAGATGGAAAAG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACTCGTGTACCCAAGCTaGAATTTCTTAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGLVYPS*NFLMPP
Trigger: TGGAGGCATTAAGAAATTCCAGCTTGGGTACACGAG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCTGTTCAGGAGGAACTaGACAAGTGGTTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLFRRN*TSGWSF
Trigger: AAAGCTCCAACCACTTGTCCAGTTCCTCCTGAACAG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATGATTGCGGCTGCCTaGGTTGTTTTAATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRMIAAA*VVLMRG
Trigger: ACCCCTCATTAAAACAACCCAGGCAGCCGCAATCAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCTGACGGGGAGGGCATaGGCTGCCGCTTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPLTGRA*AAAWHC
Trigger: ACAGTGCCAAGCGGCAGCCCATGCCCTCCCCGTCAG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGGGGCATCACTTCCTTaGTCCATGCCTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCGASLP*SMPPED
Trigger: GTCCTCTGGAGGCATGGACCAAGGAAGTGATGCCCC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCAAACCAGCAAAACCTaGCTCTGCAAGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQQTSKT*LCKCFL
Trigger: TAGAAAACACTTGCAGAGCCAGGTTTTGCTGGTTTG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESELWPAH*GCHIHF
Trigger: AAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCTCTCTCTGCCCTGTTaGGAGGCTGAAGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESELSLPC*EAEEYD
Trigger: GTCATACTCTTCAGCCTCCCAACAGGGCAGAGAGAG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPVAQLA*QPRQAS
Trigger: TGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCCATGGTGCAATCCATaGGGTGAATATGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRPWCNP*GEYGQV
Trigger: GACTTGTCCATATTCACCCCATGGATTGCACCATGG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCCCCTCTGTCTAGATTaGATGGGGAGCCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEPLCLD*MGSLRL
Trigger: AAGCCTAAGGCTCCCCATCCAATCTAGACAGAGGGG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATGGCCAGTTTCCTCTaGCAGTGTGCGTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSMASFL*QCASFS
Trigger: GCTGAAAGACGCACACTGTCAGAGGAAACTGGCCAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGCTGCATACTCCTGGTaGGTAACTAATTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQAAYSW*VTNLFL
Trigger: CAAAAACAAATTAGTTACTCACCAGGAGTATGCAGC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTGGTTATCTCTTGCTaGTGTTCTATGCTGCATACT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQLVISC*CSMLHT
Trigger: AGTATGCAGCATAGAACATCAGCAAGAGATAACCAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGACTGAATTATTTCTGTaGTTTGGGCTTCCCAATGTG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQTELFL*FGLPNV
Trigger: CACATTGGGAAGCCCAAATCACAGAAATAATTCAGT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATCATCGCTGACCCACTaGATTATTTCTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGSSLTH*IISVIW
Trigger: CCAAATCACAGAAATAATTCAGTGGGTCAGCGATGA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACATCCTTTTCATCGCTaGCCCACTGAATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGHPFHR*PTELFL
Trigger: CAGAAATAATTCAGTGGGTCAGCGATGAAAAGGATG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCTCATGTCAATCACTTaGCTAATGACAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLMSIT*LMTTLG
Trigger: GCCCAGTGTTGTCATTAGTCAAGTGATTGACATGAG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTTCCGACTATTATCTaGTGTTTCAGGTACTACCAG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQFPTII*CFRYYQ
Trigger: CTGGTAGTACCTGAAACATCAGATAATAGTCGGAAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGTGCAATCCATGGGGTaGATATGGACAAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSVQSMG*IWTSRP
Trigger: TGGGCGACTTGTCCATATTCACCCCATGGATTGCAC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATAAACCCAGTAGGATaGCCGTTATTTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQINPVG*PLFWEN
Trigger: GTTTTCCCAAAATAACGGTCATCCTACTGGGTTTAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTTCTTCACGAAAACATaGTGTCTCAGCTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQFFTKT*CLSSFQ
Trigger: CTGAAAAGAGCTGAGACAGCATGTTTTCGTGAAGAA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGCATCATCTAGTTCTTaGCTCACAGCATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGASSSS*LTALAS
Trigger: AGAAGCTAATGCTGTGAGGCAAGAACTAGATGATGC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGTTCTGCGCAGTTCTTaGCTTAAGCTTTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQVLRSS*LKLSTF
Trigger: AAAAGTTGAAAGCTTAAGGCAAGAACTGCGCAGAAC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCCAGGGCATATCTGTTaGTCGTGTACCCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSPGHIC*SCTQAG
Trigger: TCCAGCTTGGGTACACGAGCAACAGATATGCCCTGG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATGCTGTGAGTCTTGGTaGTCTATACCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGCCESW*SIPFSD
Trigger: ATCTGAAAAGGGTATAGAGCACCAAGACTCACAGCA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTGGAAGCTGTGGAATaGCTCGGAGAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLEAVE*LGESES
Trigger: GGACTCTGACTCTCCGAGGCATTCCACAGCTTCCAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGGTGGACAGAAGGGGTaGGAGCTGGTCACGAGCACC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPGGQKG*ELVTST
Trigger: GGTGCTCGTGACCAGCTCGCACCCCTTCTGTCCACC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGATAGCCTTAAAGCTGTaGTCCCTAGGAAATAACAGA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQIALKL*SLGNNR
Trigger: TCTGTTATTTCCTAGGGAGCACAGCTTTAAGGCTAT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTTGGCAAGGCCTACCTaGTGGGAGACTGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLARPT*WETAVV
Trigger: AACCACTGCAGTCTCCCAGCAGGTAGGCCTTGCCAA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGACGGGGGAGTGGAGTaGCCAATTCATTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCDGGVE*PIHSLL
Trigger: CAACAGGGAATGAATTGGGCACTCCACTCCCCCGTC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAACAAATGGCAGATGGTaGCCAGAAAATGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGTNGRW*PENAVC
Trigger: ACATACTGCATTTTCTGGCCACCATCTGCCATTTGT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAACTGGACAAGTGGTTaGAGCTTTGTTTACACAAGT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQNWTSG*SFVYTS
Trigger: ACTTGTGTAAACAAAGCTCCAACCACTTGTCCAGTT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGCAGATATTCTTTACTaGAGATCTCAACTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGADILY*RSQLRR
Trigger: TCTGCGCAGTTGAGATCTCCAGTAAAGAATATCTGC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGAGAGGAAGGATTTGCTaGCCACATCAATTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRRGRIC*PHQFLL
Trigger: CAACAGGAATTGATGTGGCCAGCAAATCCTTCCTCT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGTCAAAGTCCCTCGCTaGGGCATCACTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESVKVPR*GITSLV
Trigger: GACCAAGGAAGTGATGCCCCAGCGAGGGACTTTGAC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCCAGGGAGAGGCTCTTaGTTTTTCGGGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESPGRGS*FFGVKL
Trigger: CAGCTTCACCCCGAAAAACCAAGAGCCTCTCCCTGG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACAAACCAGCAAAACCTaGCTCTGCAAGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGQTSKT*LCKCFL
Trigger: TAGAAAACACTTGCAGAGCCAGGTTTTGCTGGTTTG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSQMLKL*CPGHAP
Trigger: TGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPQMLKL*CPGHAP
Trigger: TGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGCATCTCATTTCCTTATaGCAACTACAACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQHLISL*QLQQEE
Trigger: TTCCTCCTGTTGTAGTTGCCATAAGGAAATGAGATG...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAAGCAGGGGGCCGGCTaGCTGACTCCCTTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPKQGAG*LTPFSH
Trigger: GTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGTCGCCCAGTTAGCCTaGCAACCTAGACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCVAQLA*QPRQAS
Trigger: TGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGAATCAAAGAGTGCCATaGTGCAATCCATGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRNQRVP*CNPWGE
Trigger: TTCACCCCATGGATTGCACCATGGCACTCTTTGATT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGACAAAACTATTCCCCCTaGCAGTGTTTCTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGQNYSP*QCFSPK
Trigger: TTTAGGAGAGAAACACTGCCAGGGGGAATAGTTTTG...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAGAGAGACGGGGGAGTaGAGTGCCCAATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCRETGE*SAQFIP
Trigger: GGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATGCAATGCTGGTGCTaGATTAAACATCCAACACAC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRMQCWC*IKHPTH
Trigger: GTGTGTTGGATGTTTAATTCAGCACCAGCATTGCAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATCTTCTATTCCATTTTaGCCAAGTCGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGSSIPF*PSRCSL
Trigger: CAGAGAACATCGACTTGGTCAAAATGGAATAGAAGA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAACATCAAGATCCAGTaGGGTGGGACCAGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCNIKIQ*GGTSRN
Trigger: GTTACGGCTGGTCCCACCTCACTGGATCTTGATGTT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAACAAGTTATATGGCATaGGAATCCACACACTTCACA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGTSYMA*ESTHFT
Trigger: TGTGAAGTGTGTGGATTCTCATGCCATATAACTTGT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTTGGGAACATAGACTaGGCGGTCTCTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRFGNID*AVSEFV
Trigger: AACAAATTCAGAGACCGCTCAGTCTATGTTCCCAAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGCTGATCATTTGGAATaGGTTCAATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQADHLE*VQSDES
Trigger: AGATTCATCAGATTGAACTCATTCCAAATGATCAGC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGAGATGGAATACTGACTaGGCCACTGAATACTGTCCG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESERWNTD*ATEYCP
Trigger: CGGACAGTATTCAGTGGCTCAGTCAGTATTCCATCT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGAGAGGTCCCAGTGCTaGGGCAGCTCACGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSERSQC*GSSRVP
Trigger: TGGGACCCGTGAGCTGCCTCAGCACTGGGACCTCTC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAGAAATAGATCCTTCTaGTTCTGCATCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQRNRSF*FCISFP
Trigger: AGGAAATGAGATGCAGAATCAGAAGGATCTATTTCT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGTGCAATCCATGGGGTaGATATGGACAAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESVQSMG*IWTSRP
Trigger: TGGGCGACTTGTCCATATTCACCCCATGGATTGCAC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAATAAACCCAGTAGGATaGCCGTTATTTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGINPVG*PLFWEN
Trigger: GTTTTCCCAAAATAACGGTCATCCTACTGGGTTTAT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGAAGGAGAGAGAGGCTaGGAGCTAGCCAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCEGERG*ELARND
Trigger: ATCATTCCTGGCTAGCTCTCAGCCTCTCTCTCCTTC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGACCTCTTCTTCTAACTaGTGGTTGTGTATACTTAAG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQTSSSN*WLCILK
Trigger: CTTAAGTATACACAACCAGCAGTTAGAAGAAGAGGT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGAATGCCAAGAAAGAATaGTGTGAGTCTTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRNAKKE*CESWCS
Trigger: AGAGCACCAAGACTCACAGCATTCTTTCTTGGCATT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTCATGATCTATGATTaGGGCTGCCTGGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRFMIYD*GCLGCF
Trigger: AAAACAACCCAGGCAGCCGCAATCATAGATCATGAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATTCTGTGACGGGTCTTaGTCTGAAATAGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGFCDGS*SEIVHN
Trigger: GTTATGAACTATTTCAGAGCAAGACCCGTCACAGAA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTCCAGGACCCATGTGTaGTATGTGATTAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQSRTHV*YVIKIS
Trigger: ACTAATTTTAATCACATAGCACACATGGGTCCTGGA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTGGAAGCTGTGGAATaGCTCGGAGAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESLEAVE*LGESES
Trigger: GGACTCTGACTCTCCGAGGCATTCCACAGCTTCCAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATTCTCCCTTCTGGATaGGGAGAAGCCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSILPSG*GEAHEL
Trigger: TAGCTCATGGGCTTCTCCGCATCCAGAAGGGAGAAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAATAGCCTTAAAGCTGTaGTCCCTAGGAAATAACAGA +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGIALKL*SLGNNR
Trigger: TCTGTTATTTCCTAGGGAGCACAGCTTTAAGGCTAT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGATGATTGCGGCTGCCTaGGTTGTTTTAATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEMIAAA*VVLMRG
Trigger: ACCCCTCATTAAAACAACCCAGGCAGCCGCAATCAT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCTAGATCTTCGGCCCTaGCAGTCAGTGTATATCCCA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPLDLRP*QSVYIP
Trigger: TGGGATATACACTGACTGCCAGGGCCGAAGATCTAG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGAGGCCGAGGGTTCATaGGCAGATCTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESEAEGS*ADLSGS
Trigger: AGATCCTGAAAGATCTGCCCATGAACCCTCGGCCTC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAACTGTTGGAAGCTGTaGAATGCCTCGGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSNCWKL*NASESQ
Trigger: CTGACTCTCCGAGGCATTCCACAGCTTCCAACAGTT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPQMLKL*CPGHAP
Trigger: TGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCAAATGTTAAAGCTCTaGTGCCCAGGGCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESQMLKL*CPGHAP
Trigger: TGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAATGGGGAATAATATTTaGTTAAGGCTGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGMGNNI*LRLLKP
Trigger: GGGCTTCAACAGCCTTAACCAAATATTATTCCCCAT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCTCTGGCCTGCGCACTaGGGTTGTCACATCCATTTT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPLWPAH*GCHIHF
Trigger: AAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTGGGCTCACTCACTCTaGCCTGCGCACTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPWAHSL*PAHWGC
Trigger: ACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCTCAGTGACACAGACGTaGAGTCACAGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPSVTQT*SHRQQQ
Trigger: CTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGA...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTCAGTGACACAGACGTaGAGTCACAGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESSVTQT*SHRQQQ
Trigger: CTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCAAAACTATTCCCCCTaGCAGTGTTTCTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRQNYSP*QCFSPK
Trigger: TTTAGGAGAGAAACACTGCCAGGGGGAATAGTTTTG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTGTGCTCACCAGACATaGGCTACGGCAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCCAHQT*ATAKSA
Trigger: AGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCACTTGGGCTGGAAACTaGAACCTCTCTTTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSTWAGN*NLSLWF
Trigger: GAACCACAAAGAGAGGTTTCAGTTTCCAGCCCAAGT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTCTTCTATTCCATTTTaGCCAAGTCGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRSSIPF*PSRCSL
Trigger: CAGAGAACATCGACTTGGTCAAAATGGAATAGAAGA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCAACTCCAGTCTAGCTaGCATATCCAGTTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEQLQSS*HIQFRK
Trigger: TTTGCGAAACTGGATATGTCAGCTAGACTGGAGTTG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCTTAAGGTTGGTGTGTaGACTGAAAGTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPLKVGV*TESGVE
Trigger: CTCCACTCCACTTTCAGTTCACACACCAACCTTAAG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTCTTTCATGATCTATaGTTGCGGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSFFHDL*LRLPGL
Trigger: CAACCCAGGCAGCCGCAATCATAGATCATGAAAGAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGCTGATCATTTGGAATaGGTTCAATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGADHLE*VQSDES
Trigger: AGATTCATCAGATTGAACTCATTCCAAATGATCAGC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTATGACGATTTCGTCCTaGGATCACAGCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPMTISS*DHSNKL
Trigger: CAGCTTGTTGCTGTGATCTCAGGACGAAATCGTCAT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGGGTCGAACCTTTTTaGGAGGAAGAGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSRVEPF*EEESES
Trigger: GGATTCAGACTCTTCCTCTCAAAAAGGTTCGACCCT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCCTCTTCTGGGACTCTaGAGGAATAACGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCPLLGL*RNNAAY
Trigger: ATAAGCGGCGTTATTCCTTCAGAGTCCCAGAAGAGG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCCTCTTCTGGGACTCTaGAGGAATAACGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESPLLGL*RNNAAY
Trigger: ATAAGCGGCGTTATTCCTTCAGAGTCCCAGAAGAGG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGATGGAATACTGACTaGGCCACTGAATACTGTCCG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSRWNTD*ATEYCP
Trigger: CGGACAGTATTCAGTGGCTCAGTCAGTATTCCATCT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPRRSPQ*HRRGVT
Trigger: TGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATTTCAAGGTTGATTTaGGTCAGCTTCCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSISRLI*VSFPRN
Trigger: GTTCCGGGGGAAGCTGACTCAAATCAACCTTGAAAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGATGAGATTTCAAGGTTaGTTTGAGTCAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEMRFQG*FESASP
Trigger: GGGGGAAGCTGACTCAAATCAACCTTGAAATCTCAT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGCTGATGTTCTATGCTaGATACTCCTGGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEADVLC*ILLVSN
Trigger: GTTACTCACCAGGAGTATGCAGCATAGAACATCAGC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCTGAAGATACCCTCGTaGATCCTTTTCATCGCTGAC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLKIPS*ILFIAD
Trigger: GTCAGCGATGAAAAGGATGCACGAGGGTATCTTCAG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGCTCCCGCGGTCAGTaGTCTCCAGGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSSSRGQ*SPGRGS
Trigger: AGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCCAGTCGGAGCGCCGTaGTGGGCTCACTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGPVGAP*WAHSLW
Trigger: CCAGAGTGAGTGAGCCCAGCACGGCGCTCCGACTGG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGGTGGACAGAAGGGGTaGGAGCTGGTCACGAGCACC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSGGQKG*ELVTST
Trigger: GGTGCTCGTGACCAGCTCGCACCCCTTCTGTCCACC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGGATGGCCTCCTCCCTaGCTGAGAAGAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPGWPPP*LRREGR
Trigger: TCTCCCTTCTCTTCTCAGGCAGGGAGGAGGCCATCC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGAGATTACTTGCCATTaGAGTGGAAAAATCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGEITCH*SGKIKE
Trigger: CTCTTTGATTTTTCCACTGCAATGGCAAGTAATCTC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTCATTATGTTTTCTTTaGCTAGAACCCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRSLCFL*LEPTPC
Trigger: ACAGGGAGTGGGTTCTAGGCAAAGAAAACATAATGA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATTCATTCCCTGTTGTaGTCACCAGACATGGGCTAC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSIHSLL*SPDMGY
Trigger: GTAGCCCATGTCTGGTGAGCACAACAGGGAATGAAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTATGGGCTCCATGAAATaGAGCTCATCTAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPMGSMK*SSSSSG
Trigger: CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCAT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGATCACACCAGGCCATaGAAAACTGTACAATATTAC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRDHTRP*KTVQYY
Trigger: GTAATATTGTACAGTTTTGCATGGCCTGGTGTGATC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCTGGTCTTCAAGTCCCTaGTGGTCTGACCCTTACCTG +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGWSSSP*WSDPYL
Trigger: CAGGTAAGGGTCAGACCAGCAGGGACTTGAAGACCA...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp CATTTGTGCCTATTAGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGCTCTCCTTCTGCCCCTaGTGCATCCCAAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLCLLGITQQGLRHCSHLLSFCP*CIPSPH
Trigger: ATGAGGGCTTGGGATGCAGCAGGGGCAGAAGGAGAG...CAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCTAATAGGCACAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTGCAGTATGTGTTGGTaGGGGCATCGTTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESECSMCW*GHRFRI
Trigger: AATTCTGAAACGATGCCCCCACCAACACATACTGCA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGAAATGCAGTATGTGTTaGTGGGGGCATCGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEKCSMC*WGHRFR
Trigger: TCTGAAACGATGCCCCCACCAACACATACTGCATTT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCCAACAAATGGCAGATaGTGGCCAGAAAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEPTNGR*WPENAV
Trigger: TACTGCATTTTCTGGCCACCATCTGCCATTTGTTGG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTGTAAAACCAACAAATaGCAGATGGTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRCKTNK*QMVARK
Trigger: TTTTCTGGCCACCATCTGCCATTTGTTGGTTTTACA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTTTCTTCACTCCAGCTaGCTTAGGAATCCTGACATG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEFLHSS*LRNPDM
Trigger: CATGTCAGGATTCCTAAGCCAGCTGGAGTGAAGAAA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGAACAAGCTGATCATTTaGAATGAGTTCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQNKLII*NEFNLM
Trigger: CATCAGATTGAACTCATTCCAAATGATCAGCTTGTT...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGTATGGTCATTTGAATaGAGCATACTGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQVWSFE*SILYGF
Trigger: AAATCCATACAGTATGCTCCATTCAAATGACCATAC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCTAGATCTTCGGCCCTaGCAGTCAGTGTATATCCCA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLDLRP*QSVYIP
Trigger: TGGGATATACACTGACTGCCAGGGCCGAAGATCTAG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGAGAGGAAGGATTTGCTaGCCACATCAATTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESERGRIC*PHQFLL
Trigger: CAACAGGAATTGATGTGGCCAGCAAATCCTTCCTCT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGTCTGAATCCATTCCATaGAGTTCACATCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQSESIP*SSHQRY
Trigger: ATATCTTTGATGTGAACTCCATGGAATGGATTCAGA...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCGAGGCCGAGGGTTCATaGGCAGATCTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGEAEGS*ADLSGS
Trigger: AGATCCTGAAAGATCTGCCCATGAACCCTCGGCCTC...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCAACTGTTGGAAGCTGTaGAATGCCTCGGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESNCWKL*NASESQ
Trigger: CTGACTCTCCGAGGCATTCCACAGCTTCCAACAGTT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAGAGGAGGCGAGTGGCAGGGAGCGGAGAGCGAGAGGTCCCAGTGCTGAGGCAGGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 4 (lower is better)
Translates to: ERRRVAGSGEREVPVLRQATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...CTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATGGGGAATAATATTTaGTTAAGGCTGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRMGNNI*LRLLKP
Trigger: GGGCTTCAACAGCCTTAACCAAATATTATTCCCCAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTGCGTGCTGCCAGTGCTaGGGGGCAGGGCTTACACTC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGACCQC*GAGLTL
Trigger: GAGTGTAAGCCCTGCCCCCCAGCACTGGCAGCACGC...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACCCACTCCATGTCGGTaGTCGCTCGTGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQPTPCR*SLVGRA
Trigger: GGCTCGGCCCACGAGCGACCACCGACATGGAGTGGG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCTCCCAACCACCACTTaGATAATGCATCAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLPTTT*IMHQRQ
Trigger: TTGCCGCTGATGCATTATCCAAGTGGTGGTTGGGAG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGAACTGAAAGTGGAGTaGAGTCTACAGTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGELKVE*SLQFQI
Trigger: AATTTGAAACTGTAGACTCCACTCCACTTTCAGTTC...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
3UTR CAA 72 bp TCTCTCCTTCTGCCCCTGCTGCATCCCAAGCCCTCATaGGTTTCCATTGGGACCACTCTAGGAGTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SLLLPLLHPKPS*VSIGTTLGVSY
Trigger: ATAGGAGACTCCTAGAGTGGTCCCAATGGAAACCAATGAGGGCTTGGGATGCAGCAGGGGCAGAAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCATCATAAAGGCAGATaGGTATATCCAGTAATGTCT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRHHKGR*VYPVMS
Trigger: AGACATTACTGGATATACTCATCTGCCTTTATGATG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTGAGAGCAAGTTGCTaGCCTTCTGAATCATGCAGT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLRASC*PSESCS
Trigger: ACTGCATGATTCAGAAGGTCAGCAACTTGCTCTCAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCAACTCCAGTCTAGCTaGCATATCCAGTTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSQLQSS*HIQFRK
Trigger: TTTGCGAAACTGGATATGTCAGCTAGACTGGAGTTG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCATGACAACACTGGGCTaGGATGCTTTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESMTTLG*DAFPSA
Trigger: TGCTGAAGGAAAAGCATCTCAGCCCAGTGTTGTCAT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTTTGTTATTAGATGCTaGGAGCTGGGAAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPFVIRC*ELGSCD
Trigger: GTCACAGCTTCCCAGCTCTCAGCATCTAATAACAAA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTCTTTCATGATCTATaGTTGCGGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESFFHDL*LRLPGL
Trigger: CAACCCAGGCAGCCGCAATCATAGATCATGAAAGAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAGGGTCGAACCTTTTTaGGAGGAAGAGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCRVEPF*EEESES
Trigger: GGATTCAGACTCTTCCTCTCAAAAAGGTTCGACCCT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCAGATGGAATACTGACTaGGCCACTGAATACTGTCCG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPRWNTD*ATEYCP
Trigger: CGGACAGTATTCAGTGGCTCAGTCAGTATTCCATCT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGATTAGAACTGTGCTGTaGATTACACCCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRIRTVL*ITPIQN
Trigger: ATTTTGGATGGGTGTAATTCACAGCACAGTTCTAAT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCATTTCAAGGTTGATTTaGGTCAGCTTCCCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCISRLI*VSFPRN
Trigger: GTTCCGGGGGAAGCTGACTCAAATCAACCTTGAAAT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCACTGGATGTGAAACTTaGCGCTCGGGTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPTGCET*RSGSIH
Trigger: ATGTATGGAACCCGAGCGTCAAGTTTCACATCCAGT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442054.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTCTACAGTTTCAAATTaGTCCAGAGCATCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSTVSN*SRASVG
Trigger: GCCTACCGATGCTCTGGATCAATTTGAAACTGTAGA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCCGTCCAAAATAAACTaGTCCAACTGCCTCAAACGC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCPSKIN*SNCLKR
Trigger: GCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGACCTCTTCTTCTAACTaGTGGTTGTGTATACTTAAG +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRTSSSN*WLCILK
Trigger: CTTAAGTATACACAACCAGCAGTTAGAAGAAGAGGT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTATATCTTTCCGACTTaGATGGATAACATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRYIFPT*MDNIRS
Trigger: GCTTCTGATGTTATCCATGCAAGTCGGAAAGATATA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTGTTCACTGAAGATTaGCATCCACTGGACATTATA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRLFTED*HPLDII
Trigger: TATAATGTCCAGTGGATGGCAATCTTCAGTGAACAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCACTGGAGATCTCAACTaGGCAGATAGCATCCATTGG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCTGDLN*ADSIHW
Trigger: CCAATGGATGCTATCTGCGCAGTTGAGATCTCCAGT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCACTGGAGATCTCAACTaGGCAGATAGCATCCATTGG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPTGDLN*ADSIHW
Trigger: CCAATGGATGCTATCTGCGCAGTTGAGATCTCCAGT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCAGTTCGTCCCCTTCTaGCATCTTATTTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRQFVPF*HLIFEI
Trigger: TATTTCAAAAATAAGATGGCAGAAGGGGACGAACTG...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAATTTCCCTCCTCTGCTaGATCCTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVISLLC*ILSSSG
Trigger: CCCAGAAGAGGAAAGGATGCAGCAGAGGAGGGAAAT...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTCCAGGACCCATGTGTaGTATGTGATTAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRSRTHV*YVIKIS
Trigger: ACTAATTTTAATCACATAGCACACATGGGTCCTGGA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAGCAAAACCTGGCTCTaGAAGTGTTTTCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSKTWL*KCFLQL
Trigger: GAGCTGTAGAAAACACTTGCAGAGCCAGGTTTTGCT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCACGCATTCGGGACTaGTCTATTATGACTGATGAG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPARIRD*SIMTDE
Trigger: CTCATCAGTCATAATAGAGCAGTCCCGAATGCGTGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCATTCATTCCCTGTTGTaGTCACCAGACATGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESIHSLL*SPDMGY
Trigger: GTAGCCCATGTCTGGTGAGCACAACAGGGAATGAAT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCATGGGCTCCATGAAATaGAGCTCATCTAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESMGSMK*SSSSSG
Trigger: CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCAT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCGAGGAGACTAGAGGCTaGGGCAGCCCGGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESEETRG*GSPAPN
Trigger: GTTGGGAGCCGGGCTGCCGCAGCCTCTAGTCTCCTC...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCCAACAAATGGCAGATaGTGGCCAGAAAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPPTNGR*WPENAV
Trigger: TACTGCATTTTCTGGCCACCATCTGCCATTTGTTGG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGAATACTGCAGAGCTTaGACAGTCTGTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSEYCRA*TVCVDS
Trigger: AGAGTCAACACAGACTGTCCAAGCTCTGCAGTATTC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGATTTACACAAGTTATATaGCATGAGAATCCACACACT +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGFTQVI*HENPHT
Trigger: AGTGTGTGGATTCTCATGCCATATAACTTGTGTAAA...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTCTTTCCGACTTGCATaGATAACATCAGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESESFRLA*ITSEAK
Trigger: CTTGGCTTCTGATGTTATCCATGCAAGTCGGAAAGA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTAGATGCTGAGAGCTaGGAAGCTGTGACCCTAAAT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLDAES*EAVTLN
Trigger: ATTTAGGGTCACAGCTTCCCAGCTCTCAGCATCTAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTGTCATAAGCCTCTTTaGGAACATAGACTGAGCGGT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPCHKPL*EHRLSG
Trigger: ACCGCTCAGTCTATGTTCCCAAAGAGGCTTATGACA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAAACAAGCTGATCATTTaGAATGAGTTCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: SCYCCQPLVAFRPSRRGGNKLII*NEFNLM
Trigger: CATCAGATTGAACTCATTCCAAATGATCAGCTTGTT...TCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAGAGGAAGGATTTGCTaGCCACATCAATTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPRGRIC*PHQFLL
Trigger: CAACAGGAATTGATGTGGCCAGCAAATCCTTCCTCT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCATCCTTTCCTCTTCTaGGACTCTGAAGGAATAACG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSHPFLF*DSEGIT
Trigger: CGTTATTCCTTCAGAGTCCCAGAAGAGGAAAGGATG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTACTCATGGAGCGGCCTaGCTCAGGGCGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSTHGAA*LRAGFG
Trigger: ACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTAAGCAGGGGGCCGGCTaGCTGACTCCCTTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGKQGAG*LTPFSH
Trigger: GTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCATAATTCTAACCTATaGAAGGAGAGAGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEHNSNL*KEREAE
Trigger: CTCAGCCTCTCTCTCCTTCCATAGGTTAGAATTATG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGAACTGAAAGTGGAGTaGAGTCTACAGTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRELKVE*SLQFQI
Trigger: AATTTGAAACTGTAGACTCCACTCCACTTTCAGTTC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCTGTCTGTCTCCCAGATaGCCTGTACACTCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGCLSPR*PVHSRR
Trigger: CCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACA...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCACTGCCCATTGGTCTaGGCGGGCCCGTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSHCPLV*AGPSKI
Trigger: TATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTCATCGCTGACCCACTaGATTATTTCTGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSSSLTH*IISVIW
Trigger: CCAAATCACAGAAATAATTCAGTGGGTCAGCGATGA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCAACTCCAGTCTAGCTaGCATATCCAGTTTCGCAAA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPQLQSS*HIQFRK
Trigger: TTTGCGAAACTGGATATGTCAGCTAGACTGGAGTTG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTTGTTATTAGATGCTaGGAGCTGGGAAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESFVIRC*ELGSCD
Trigger: GTCACAGCTTCCCAGCTCTCAGCATCTAATAACAAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTTTGGGAACATAGACTaGGCGGTCTCTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPFGNID*AVSEFV
Trigger: AACAAATTCAGAGACCGCTCAGTCTATGTTCCCAAA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTTGGGAACATAGACTaGGCGGTCTCTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSFGNID*AVSEFV
Trigger: AACAAATTCAGAGACCGCTCAGTCTATGTTCCCAAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAAAGCAATTCTTTCATaGTCTATGATTGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSKAILS*SMIAAA
Trigger: GGCAGCCGCAATCATAGATCATGAAAGAATTGCTTT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGGAAAAAGTCGTACATaGCGATTTCGTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPGKSRT*RFRPEI
Trigger: GATCTCAGGACGAAATCGTCATGTACGACTTTTTCC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAAGGGTCGAACCTTTTTaGGAGGAAGAGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVRVEPF*EEESES
Trigger: GGATTCAGACTCTTCCTCTCAAAAAGGTTCGACCCT...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTACTGTCCGACTTTCCTaGGGCCGAGGGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGTVRLS*GRGFMG
Trigger: GCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGGAAGGGATCAGAGGTaGCAGAATCGTGTATTTCTA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESGRDQR*QNRVFL
Trigger: TAGAAATACACGATTCTGTCACCTCTGATCCCTTCC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTTCCCCAGGCTTATGTaGAGAAGCCCACGCCCACTC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSFPRLM*RSPRPL
Trigger: GAGTGGGCGTGGGCTTCTTCACATAAGCCTGGGGAA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCCACAATCCAGCACCTaGGAGAGGAAGCCAGTCGGA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSPQSST*ERKPVG
Trigger: TCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCATGAGATTTCAAGGTTaGTTTGAGTCAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCMRFQG*FESASP
Trigger: GGGGGAAGCTGACTCAAATCAACCTTGAAATCTCAT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGTTCCCTAAGACACTaGGGGCATAAAACCAAACAA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSSSLRH*GHKTKQ
Trigger: TTGTTTGGTTTTATGCCCTCAGTGTCTTAGGGAACT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAGTTCCCTAAGACACTaGGGGCATAAAACCAAACAA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSSLRH*GHKTKQ
Trigger: TTGTTTGGTTTTATGCCCTCAGTGTCTTAGGGAACT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAAGTGAAGGACATCCGGCACTTACTTGCTaGCAAGCCACTGCTAGCACT +
Preference number: 4 (lower is better)
Translates to: LRHCSHLRMQWAHVSEGHPALTC*QATAST
Trigger: AGTGCTAGCAGTGGCTTGTCAGCAAGTAAGTGCCGG...ATGTCCTTCACTTACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCTCCACCAGCGATTCTaGATAAAATGGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPLHQRF*IKWCFS
Trigger: GGAGAAACACCATTTTATGCAGAATCGCTGGTGGAG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTCTGGAATATAAGGTaGTTCACAGTTCCGAATATT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRFWNIR*FTVPNI
Trigger: AATATTCGGAACTGTGAAGCACCTTATATTCCAGAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCTTTGGCTCTTATTTCTaGATCCAGAGCCGACTGCAA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPFGSYF*IQSRLQ
Trigger: TTGCAGTCGGCTCTGGATGCAGAAATAAGAGCCAAA...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTGCTGTGAGTCTTGGTaGTCTATACCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSCCESW*SIPFSD
Trigger: ATCTGAAAAGGGTATAGAGCACCAAGACTCACAGCA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAATGCCAAGAAAGAATaGTGTGAGTCTTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSNAKKE*CESWCS
Trigger: AGAGCACCAAGACTCACAGCATTCTTTCTTGGCATT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATCTATGATTGCGGCTaGCTGGGTTGTTTTAATGAG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSIYDCG*LGCFNE
Trigger: CTCATTAAAACAACCCAGGCAGCCGCAATCATAGAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTTCATGATCTATGATTaGGGCTGCCTGGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPFMIYD*GCLGCF
Trigger: AAAACAACCCAGGCAGCCGCAATCATAGATCATGAA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCACAAGAGGAAGGATTTaGTGGCCACATCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCTRGRI*WPHQFL
Trigger: CAGGAATTGATGTGGCCAGCAAATCCTTCCTCTTGT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCACAAGAGGAAGGATTTaGTGGCCACATCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESTRGRI*WPHQFL
Trigger: CAGGAATTGATGTGGCCAGCAAATCCTTCCTCTTGT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCACCGAGAGATATGGTaGATTGTAACAACAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSHREIW*IVTTRG
Trigger: TCCTCTTGTTGTTACAATGCACCATATCTCTCGGTG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCCCTCTTTAATGCGCTaGCATTCTGTGCGGATGACC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPPSLMR*HSVRMT
Trigger: GGTCATCCGCACAGAATGGCAGCGCATTAAAGAGGG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAGCTCCCGCGGTCAGTaGTCTCCAGGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESSSRGQ*SPGRGS
Trigger: AGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCT...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAACAGCCTCAGCTCCCTaGACATGCCGCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQTASAP*TCRRPA
Trigger: TGCTGGCCTGCGGCATGTGCAGGGAGCTGAGGCTGT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTATTCCCGATTATAGGTaGTTACAATGGAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPIPDYR*LQWNPQ
Trigger: CTGGGGATTCCATTGTAAGCACCTATAATCGGGAAT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGGATGGCCTCCTCCCTaGCTGAGAAGAGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSGWPPP*LRREGR
Trigger: TCTCCCTTCTCTTCTCAGGCAGGGAGGAGGCCATCC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCAAAGAGTGCCATGGTaGAATCCATGGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCQRVPW*NPWGEY
Trigger: ATATTCACCCCATGGATTGCACCATGGCACTCTTTG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGGAAAAATCAAAGAGTaGCATGGTGCAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPGKIKE*HGAIHG
Trigger: CCCATGGATTGCACCATGGCACTCTTTGATTTTTCC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGGGAATGATAGATTGTTaGTGTAAACATGACAGGAAT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRGMIDC*CKHDRN
Trigger: ATTCCTGTCATGTTTACAGCAACAATCTATCATTCC...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTGGCTACGGCAAAGTCTaGTCTGAGCGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGGYGKV*SERPSV
Trigger: GACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCC...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGAGTTCTCTGTTTTATTaGAATACAGCAAAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRSSLFY*NTAKSG
Trigger: ACCAGACTTTGCTGTATTGCAATAAAACAGAGAACT...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTCTTTTCCATCTTCCATaGCTTGAAGGATTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPLFHLP*LEGFQE
Trigger: CTCCTGAAATCCTTCAAGCCATGGAAGATGGAAAAG...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTATCAGTCACTTGGGCTaGAAACTGAAACCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPISHLG*KLKPLF
Trigger: AAAGAGAGGTTTCAGTTTCCAGCCCAAGTGACTGAT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGCAAGTTTCTGTTTTTaGGTGTGCAATTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEASFCF*VCNSVS
Trigger: GCTAACAGAATTGCACACCCAAAAACAGAAACTTGC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCTCGTGTACCCAAGCTaGAATTTCTTAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPLVYPS*NFLMPP
Trigger: TGGAGGCATTAAGAAATTCCAGCTTGGGTACACGAG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTTTACACAAGTTATATaGCATGAGAATCCACACACT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRFTQVI*HENPHT
Trigger: AGTGTGTGGATTCTCATGCCATATAACTTGTGTAAA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTTCTTCACTCCAGCTaGCTTAGGAATCCTGACATG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESFLHSS*LRNPDM
Trigger: CATGTCAGGATTCCTAAGCCAGCTGGAGTGAAGAAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCATGATTGCGGCTGCCTaGGTTGTTTTAATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGMIAAA*VVLMRG
Trigger: ACCCCTCATTAAAACAACCCAGGCAGCCGCAATCAT...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCTTAGAAATCCTGACTaGAATCCCACACAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLRNPD*NPTQSC
Trigger: ACAACTCTGTGTGGGATTCCAGTCAGGATTTCTAAG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGTACACCGAGAGATATaGTGCATTGTAACAACAAGA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEVHREI*CIVTTR
Trigger: TCTTGTTGTTACAATGCACCATATCTCTCGGTGTAC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GAATCCCTGTCCTGCTACTGCTGCCAGCCCCTGGTGGCTTTCAGGCCGAGCAGGTCTGAATCCATTCCATaGAGTTCACATCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: ESLSCYCCQPLVAFRPSRSESIP*SSHQRY
Trigger: ATATCTTTGATGTGAACTCCATGGAATGGATTCAGA...CCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCATCCTTTCCTCTTCTaGGACTCTGAAGGAATAACG +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPHPFLF*DSEGIT
Trigger: CGTTATTCCTTCAGAGTCCCAGAAGAGGAAAGGATG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCCTGCTGCTGCTGAAGTaGCTTCAAATGTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLLLLK*LQMLKL
Trigger: GAGCTTTAACATTTGAAGCCACTTCAGCAGCAGCAG...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTTGGGCTCACTCACTCTaGCCTGCGCACTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGWAHSL*PAHWGC
Trigger: ACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCA...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTATAGGTGCTTACAATaGAATCCCCAGCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESYRCLQ*NPQQDP
Trigger: AGGATCCTGCTGGGGATTCCATTGTAAGCACCTATA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCCATAATTCTAACCTATaGAAGGAGAGAGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSHNSNL*KEREAE
Trigger: CTCAGCCTCTCTCTCCTTCCATAGGTTAGAATTATG...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTCTCTTTGTGGTTCATaGTTTTTCCGTATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSLCGS*FFRMSP
Trigger: TGGAGACATACGGAAAAATCATGAACCACAAAGAGA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGCTGCATACTCCTGGTaGGTAACTAATTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPAAYSW*VTNLFL
Trigger: CAAAAACAAATTAGTTACTCACCAGGAGTATGCAGC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAAGTTGCTGACCTTCTaGATCATGCAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPKLLTF*IMQFFL
Trigger: AAGAAAGAACTGCATGATTCAGAAGGTCAGCAACTT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCACTGAATTATTTCTGTaGTTTGGGCTTCCCAATGTG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSTELFL*FGLPNV
Trigger: CACATTGGGAAGCCCAAATCACAGAAATAATTCAGT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAGGAAAAAGTCGTACATaGCGATTTCGTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVGKSRT*RFRPEI
Trigger: GATCTCAGGACGAAATCGTCATGTACGACTTTTTCC...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCCCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGAGAGGTCCCAGTGCTaGGGCAGCTCACGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGERSQC*GSSRVP
Trigger: TGGGACCCGTGAGCTGCCTCAGCACTGGGACCTCTC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGCATCCATCTTTTGTTaGATACAAGAGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSASIFC*IQEAPF
Trigger: AAAAGGAGCCTCTTGTATTCAACAAAAGATGGATGC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAAAATACTTTATCTGTaGGCTGTGCTACTGACTCCT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPKILYL*AVLLTP
Trigger: AGGAGTCAGTAGCACAGCTCACAGATAAAGTATTTT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAAGACTGCAGTGGTTGTaGTCCCGGCCAAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQRLQWL*SRPKAA
Trigger: TGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTACTGTCCGACTTTCCTaGGGCCGAGGGTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGTVRLS*GRGFLR
Trigger: TCTGAGGAACCCTCGGCCTCAGGAAAGTCGGACAGT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTTCTCCAGACATGTTTaGTTCGATTTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPFSRHV*FDFCWF
Trigger: AAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTCAACAGTTGAATACTaGAGAGCTTGGACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESSTVEY*RAWTVC
Trigger: ACAGACTGTCCAAGCTCTGCAGTATTCAACTGTTGA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGCATCATCTAGTTCTTaGCTCACAGCATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESASSSS*LTALAS
Trigger: AGAAGCTAATGCTGTGAGGCAAGAACTAGATGATGC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGACCTCTTCTTCTAACTaGTGGTTGTGTATACTTAAG +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESETSSSN*WLCILK
Trigger: CTTAAGTATACACAACCAGCAGTTAGAAGAAGAGGT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTGCTGTGAGTCTTGGTaGTCTATACCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESCCESW*SIPFSD
Trigger: ATCTGAAAAGGGTATAGAGCACCAAGACTCACAGCA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCAATGCCAAGAAAGAATaGTGTGAGTCTTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPNAKKE*CESWCS
Trigger: AGAGCACCAAGACTCACAGCATTCTTTCTTGGCATT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGACATGACCTTCATATaGTGTTCCTATTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPDMTFI*CSYSFL
Trigger: CAGAAAGGAATAGGAACAGCATATGAAGGTCATGTC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGACATGACCTTCATATaGTGTTCCTATTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSDMTFI*CSYSFL
Trigger: CAGAAAGGAATAGGAACAGCATATGAAGGTCATGTC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCACCGAGAGATATGGTaGATTGTAACAACAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESHREIW*IVTTRG
Trigger: TCCTCTTGTTGTTACAATGCACCATATCTCTCGGTG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGCAGTTCGTCCCCTTCTaGCATCTTATTTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEQFVPF*HLIFEI
Trigger: TATTTCAAAAATAAGATGGCAGAAGGGGACGAACTG...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTATTTCCCTCCTCTGCTaGATCCTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPISLLC*ILSSSG
Trigger: CCCAGAAGAGGAAAGGATGCAGCAGAGGAGGGAAAT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGGCTACGGCAAAGTCTaGTCTGAGCGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQGYGKV*SERPSV
Trigger: GACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCGATCACACCAGGCCATaGAAAACTGTACAATATTAC +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSDHTRP*KTVQYY
Trigger: GTAATATTGTACAGTTTTGCATGGCCTGGTGTGATC...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGAGCACGCCAAGTCTTaGCCGGAGGCGGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQEHAKS*PEAAFR
Trigger: ACGAAAAGCCGCCTCCGGGCAAGACTTGGCGTGCTC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTGTAAAACCAACAAATaGCAGATGGTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSCKTNK*QMVARK
Trigger: TTTTCTGGCCACCATCTGCCATTTGTTGGTTTTACA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCTCCTTATCTCGGACATaGCGAGCAAGTTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPSLSRT*RASFCF
Trigger: AAAACAGAAACTTGCTCGCCATGTCCGAGATAAGGA...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTCCTTATCTCGGACATaGCGAGCAAGTTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESSLSRT*RASFCF
Trigger: AAAACAGAAACTTGCTCGCCATGTCCGAGATAAGGA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334218.9
ENST00000366769.7
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTCAACTCTTCTTGGATaGCCTGTTTGGCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSTLLG*PVWLLF
Trigger: AAATAAGAGCCAAACAGGCCATCCAAGAAGAGTTGA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCAGATATTCTTTACTaGAGATCTCAACTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPADILY*RSQLRR
Trigger: TCTGCGCAGTTGAGATCTCCAGTAAAGAATATCTGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAAGAGGAAGGATTTGCTaGCCACATCAATTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVRGRIC*PHQFLL
Trigger: CAACAGGAATTGATGTGGCCAGCAAATCCTTCCTCT...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCACTCATGGAGCGGCCTaGCTCAGGGCGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESTHGAA*LRAGFG
Trigger: ACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGT...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAACTCATGGAGCGGCCTaGCTCAGGGCGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQTHGAA*LRAGFG
Trigger: ACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGGGGGCTGCTTAGGTTaGAACTGTTGGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSGGCLG*NCWKLW
Trigger: CCACAGCTTCCAACAGTTCCAACCTAAGCAGCCCCC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAGCTGCCAGCCCCTGGTaGCTTTCAGGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGAASPW*LSGRAG
Trigger: GCCTGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGC...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTACTTGCCATTGCAGTaGAAAAATCAAAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSYLPLQ*KNQRVP
Trigger: TGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCAAAACTATTCCCCCTaGCAGTGTTTCTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESQNYSP*QCFSPK
Trigger: TTTAGGAGAGAAACACTGCCAGGGGGAATAGTTTTG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESAKGGK*PCCVCG
Trigger: ACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGC...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGAGAGACGGGGGAGTaGAGTGCCCAATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSRETGE*SAQFIP
Trigger: GGGAATGAATTGGGCACTCCACTCCCCCGTCTCTCT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAGCACGGTGTCCTGTGTaGGGAGGGCCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETARCPV*GGPSVL
Trigger: CAGCACGCTGGGCCCTCCCCACACAGGACACCGTGC...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAGCACGGTGTCCTGTGTaGGGAGGGCCCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: STNMISQNLRVDNLAGHRARCPV*GGPSVL
Trigger: CAGCACGCTGGGCCCTCCCCACACAGGACACCGTGC...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGTTCCTACAGCCACTaGGGACTGAACCGTTCCATC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSSSYSH*GLNRSI
Trigger: GATGGAACGGTTCAGTCCTCAGTGGCTGTAGGAACT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGTCTGTGTTGACTCTTaGAGTTTTCTACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCVCVDS*SFLLSS
Trigger: TGAACTCAGTAGAAAACTTCAAGAGTCAACACAGAC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTGGACAGTCTGTGTTaGCTCTTGAAGTTTTCTACT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESLDSLC*LLKFST
Trigger: AGTAGAAAACTTCAAGAGTCAACACAGACTGTCCAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTGGACCATCAACAGTTaGATACTGCAGAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPWTINS*ILQSLD
Trigger: GTCCAAGCTCTGCAGTATTCAACTGTTGATGGTCCA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAAGTTGCTGACCTTCTaGATCATGCAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCKLLTF*IMQFFL
Trigger: AAGAAAGAACTGCATGATTCAGAAGGTCAGCAACTT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCACTGAATTATTTCTGTaGTTTGGGCTTCCCAATGTG +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESTELFL*FGLPNV
Trigger: CACATTGGGAAGCCCAAATCACAGAAATAATTCAGT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCACAAGTTATATGGCATaGGAATCCACACACTTCACA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCTSYMA*ESTHFT
Trigger: TGTGAAGTGTGTGGATTCTCATGCCATATAACTTGT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCACACCCTTTAGTTTCTaGCAGCTTGTAAAAATCGGT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESTPFSF*QLVKIG
Trigger: ACCGATTTTTACAAGCTGTCAGAAACTAAAGGGTGT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCACACCCTTTAGTTTCTaGCAGCTTGTAAAAATCGGT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPTPFSF*QLVKIG
Trigger: ACCGATTTTTACAAGCTGTCAGAAACTAAAGGGTGT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CATTTGTGCCTATTAGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGCACAGAGTTGTTCACTaGAGATTGCCATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: HLCLLGITQQGLRHCSHLHRVVH*RLPSTG
Trigger: TCCAGTGGATGGCAATCTTCAGTGAACAACTCTGTG...CAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCTAATAGGCACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTGAGAGGTCCCAGTGCTaGGGCAGCTCACGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFERSQC*GSSRVP
Trigger: TGGGACCCGTGAGCTGCCTCAGCACTGGGACCTCTC...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTGGCAACAATCAGGTTaGTACTCACTGCGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPWQQSG*YSLRLL
Trigger: CAGCAAACGCAGTGAGTATCAACCTGATTGTTGCCA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGCATCCATCTTTTGTTaGATACAAGAGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESASIFC*IQEAPF
Trigger: AAAAGGAGCCTCTTGTATTCAACAAAAGATGGATGC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTACAGACACCTCGCTGTaGCTTAGGGAGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGTDTSL*LREGQD
Trigger: ATCCTGTCCCTCCCTAAGTCACAGCGAGGTGTCTGT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTAGAAATAGATCCTTCTaGTTCTGCATCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPRNRSF*FCISFP
Trigger: AGGAAATGAGATGCAGAATCAGAAGGATCTATTTCT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATTAGAACTGTGCTGTaGATTACACCCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSIRTVL*ITPIQN
Trigger: ATTTTGGATGGGTGTAATTCACAGCACAGTTCTAAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATAAACCCAGTAGGATaGCCGTTATTTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPINPVG*PLFWEN
Trigger: GTTTTCCCAAAATAACGGTCATCCTACTGGGTTTAT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQRQSLL*APLCLD
Trigger: ATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTTAAAATGGGCTCCATaGAATGCAGCTCATCTAGTT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLKWAP*NAAHLV
Trigger: AACTAGATGAGCTGCATTTCATGGAGCCCATTTTAA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCCAGGGCATATCTGTTaGTCGTGTACCCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSPGHIC*SCTQAG
Trigger: TCCAGCTTGGGTACACGAGCAACAGATATGCCCTGG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGACATGACCTTCATATaGTGTTCCTATTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCDMTFI*CSYSFL
Trigger: CAGAAAGGAATAGGAACAGCATATGAAGGTCATGTC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTATATCTTTCCGACTTaGATGGATAACATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPYIFPT*MDNIRS
Trigger: GCTTCTGATGTTATCCATGCAAGTCGGAAAGATATA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCTTCATGATCTATGATTaGGGCTGCCTGGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGFMIYD*GCLGCF
Trigger: AAAACAACCCAGGCAGCCGCAATCATAGATCATGAA...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTTCTGTGACGGGTCTTaGTCTGAAATAGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCFCDGS*SEIVHN
Trigger: GTTATGAACTATTTCAGAGCAAGACCCGTCACAGAA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCTTGTTCACTGAAGATTaGCATCCACTGGACATTATA +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSLFTED*HPLDII
Trigger: TATAATGTCCAGTGGATGGCAATCTTCAGTGAACAA...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCACTTCCTTGGTCCATaGCTCCAGAGGACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSHFLGP*LQRTKS
Trigger: GCTCTTTGTCCTCTGGAGGCATGGACCAAGGAAGTG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTTGGAAGCTGTGGAATaGCTCGGAGAGTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLEAVE*LGESES
Trigger: GGACTCTGACTCTCCGAGGCATTCCACAGCTTCCAA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGCACGCATTCGGGACTaGTCTATTATGACTGATGAG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPARIRD*SIMTDE
Trigger: CTCATCAGTCATAATAGAGCAGTCCCGAATGCGTGC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGGGAATGATAGATTGTTaGTGTAAACATGACAGGAAT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESEGMIDC*CKHDRN
Trigger: ATTCCTGTCATGTTTACAGCAACAATCTATCATTCC...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTATGGGCTCCATGAAATaGAGCTCATCTAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPMGSMK*SSSSSG
Trigger: CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCAT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTATTTTCGGGACCTTTGGACATaGGTGGAATGTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FVCLPDGLYTLEGLWDYFRDLWT*VECPAS
Trigger: TGAGGCAGGACATTCCACGCATGTCCAAAGGTCCCG...AAAATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCATTATTTCTGTGATTTaGGCTTCCCAATGTGCAACT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSIISVI*ASQCAT
Trigger: AGTTGCACATTGGGAAGCCCAAATCACAGAAATAAT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCTTATTCAACTCTTCTTaGATGGCCTGTTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESLFNSS*MACLAL
Trigger: AAGAGCCAAACAGGCCATCCAAGAAGAGTTGAATAA...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCAACTGGACAAGTGGTTaGAGCTTTGTTTACACAAGT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPNWTSG*SFVYTS
Trigger: ACTTGTGTAAACAAAGCTCCAACCACTTGTCCAGTT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCCTTAGAAATCCTGACTaGAATCCCACACAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGLRNPD*NPTQSC
Trigger: ACAACTCTGTGTGGGATTCCAGTCAGGATTTCTAAG...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTATGGAGCATACTGTATaGATTTCCTTCTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPMEHTV*ISFSIQ
Trigger: TTGAATGGAGAAGGAAATCCATACAGTATGCTCCAT...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGTACACCGAGAGATATaGTGCATTGTAACAACAAGA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPVHREI*CIVTTR
Trigger: TCTTGTTGTTACAATGCACCATATCTCTCGGTGTAC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGTCTGAATCCATTCCATaGAGTTCACATCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESESESIP*SSHQRY
Trigger: ATATCTTTGATGTGAACTCCATGGAATGGATTCAGA...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGAGGCCGAGGGTTCATaGGCAGATCTTTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSEAEGS*ADLSGS
Trigger: AGATCCTGAAAGATCTGCCCATGAACCCTCGGCCTC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGACTGACGGGGAGGGCATaGGCTGCCGCTTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGLTGRA*AAAWHC
Trigger: ACAGTGCCAAGCGGCAGCCCATGCCCTCCCCGTCAG...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp CCCTGGTGGCTTTCAGGCCGAGCAGGCGAGGTGGAGGGAAGAGATGAAAGTGAGACATCCATTTTCCACTaGCTATGGGGAATAATATTT +
Preference number: 4 (lower is better)
Translates to: PWWLSGRAGEVEGRDESETSIFH*LWGIIF
Trigger: AAATATTATTCCCCATAGCCAGTGGAAAATGGATGT...CTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAGCCACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCATCTCATTTCCTTATaGCAACTACAACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPHLISL*QLQQEE
Trigger: TTCCTCCTGTTGTAGTTGCCATAAGGAAATGAGATG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTCAGTGACACAGACGTaGAGTCACAGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSSVTQT*SHRQQQ
Trigger: CTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAAATCTCGGCTTGGGATaGCCTCCTCCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQNLGLG*PPPCLR
Trigger: TCTCAGGCAGGGAGGAGGCCATCCCAAGCCGAGATT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCTACTTGCCATTGCAGTaGAAAAATCAAAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPYLPLQ*KNQRVP
Trigger: TGGCACTCTTTGATTTTTCCACTGCAATGGCAAGTA...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTGGAAAACCAAATAGATaGGCTCCTTTTAGTTGTATC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPGKPNR*APFSCI
Trigger: GATACAACTAAAAGGAGCCCATCTATTTGGTTTTCC...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTGTGCTCACCAGACATaGGCTACGGCAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSCAHQT*ATAKSA
Trigger: AGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTAGTTCCTACAGCCACTaGGGACTGAACCGTTCCATC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGSSYSH*GLNRSI
Trigger: GATGGAACGGTTCAGTCCTCAGTGGCTGTAGGAACT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAATCAGAAGCCAAGACTaGACTCACAGAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVIRSQD*THRKFF
Trigger: GAAGAATTTTCTGTGAGTTCAGTCTTGGCTTCTGAT...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTTTGTTATTAGATGCTaGGAGCTGGGAAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPFVIRC*ELGSCD
Trigger: GTCACAGCTTCCCAGCTCTCAGCATCTAATAACAAA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCGCTGATCATTTGGAATaGGTTCAATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCADHLE*VQSDES
Trigger: AGATTCATCAGATTGAACTCATTCCAAATGATCAGC...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCGCTGATCATTTGGAATaGGTTCAATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPADHLE*VQSDES
Trigger: AGATTCATCAGATTGAACTCATTCCAAATGATCAGC...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGGAAAAAGTCGTACATaGCGATTTCGTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPGKSRT*RFRPEI
Trigger: GATCTCAGGACGAAATCGTCATGTACGACTTTTTCC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGGAGAGGTCCCAGTGCTaGGGCAGCTCACGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LITYICVICLFKLPLGVGERSQC*GSSRVP
Trigger: TGGGACCCGTGAGCTGCCTCAGCACTGGGACCTCTC...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCGAGAGGTCCCAGTGCTaGGGCAGCTCACGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KPMSYFRTIMRLYCESKIERSQC*GSSRVP
Trigger: TGGGACCCGTGAGCTGCCTCAGCACTGGGACCTCTC...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGGAAGGGATCAGAGGTaGCAGAATCGTGTATTTCTA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPGRDQR*QNRVFL
Trigger: TAGAAATACACGATTCTGTCACCTCTGATCCCTTCC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCAGAAATAGATCCTTCTaGTTCTGCATCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCRNRSF*FCISFP
Trigger: AGGAAATGAGATGCAGAATCAGAAGGATCTATTTCT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCAGAAATAGATCCTTCTaGTTCTGCATCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPRNRSF*FCISFP
Trigger: AGGAAATGAGATGCAGAATCAGAAGGATCTATTTCT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCATTAGAACTGTGCTGTaGATTACACCCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCIRTVL*ITPIQN
Trigger: ATTTTGGATGGGTGTAATTCACAGCACAGTTCTAAT...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATTAGAACTGTGCTGTaGATTACACCCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPIRTVL*ITPIQN
Trigger: ATTTTGGATGGGTGTAATTCACAGCACAGTTCTAAT...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTTTGGCTCTTATTTCTaGATCCAGAGCCGACTGCAA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPFGSYF*IQSRLQ
Trigger: TTGCAGTCGGCTCTGGATGCAGAAATAAGAGCCAAA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCTTCTGTGACGGGTCTTaGTCTGAAATAGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGFCDGS*SEIVHN
Trigger: GTTATGAACTATTTCAGAGCAAGACCCGTCACAGAA...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTTGTTCACTGAAGATTaGCATCCACTGGACATTATA +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCLFTED*HPLDII
Trigger: TATAATGTCCAGTGGATGGCAATCTTCAGTGAACAA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCAGTTCGTCCCCTTCTaGCATCTTATTTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESQFVPF*HLIFEI
Trigger: TATTTCAAAAATAAGATGGCAGAAGGGGACGAACTG...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCTTAGTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCCAGTTCGTCCCCTTCTaGCATCTTATTTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: SLVSHSRDQFSLLDAEKPQFVPF*HLIFEI
Trigger: TATTTCAAAAATAAGATGGCAGAAGGGGACGAACTG...GGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAAGCTCCCGCGGTCAGTaGTCTCCAGGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETSSRGQ*SPGRGS
Trigger: AGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCT...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTTCAGCTCCCTGCACATaGCGCAGGCCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFSAPCT*RRPAWW
Trigger: CCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGATCAGCTCCCTGCACATaGCGCAGGCCAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGSAPCT*RRPAWW
Trigger: CCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGA...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAACAGCCTCAGCTCCCTaGACATGCCGCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGTASAP*TCRRPA
Trigger: TGCTGGCCTGCGGCATGTGCAGGGAGCTGAGGCTGT...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCCTGCTTTTAGAATCTaGACGCATTCGGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSPAFRI*THSGLL
Trigger: GAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTTGTGGTTTTGACCTCTaGTCACCCCTGCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGCGFDL*SPLLWL
Trigger: AAGCCAGAGCAGGGGTGAGCAGAGGTCAAAACCACA...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGGCAAATGGCCCTGCTaGGTCTGTGGTTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQGKWPC*VCGFDL
Trigger: GAGGTCAAAACCACAGACGCAGCAGGGCCATTTGCC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCAGTTCTCTGTTTTATTaGAATACAGCAAAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSSSLFY*NTAKSG
Trigger: ACCAGACTTTGCTGTATTGCAATAAAACAGAGAACT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCATTCGATGTATCTGTTaGGCTACTAACTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESIRCIC*ATNFWN
Trigger: ATTCCAGAAGTTAGTAGCCCAACAGATACATCGAAT...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR CCA 90 bp GCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCCTGTCCTTCTTCTTCTAACTGCTaGTTGTGTATACTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: AGGVDLRVVSSELLNPCPSSSNC*LCILKF
Trigger: GAACTTAAGTATACACAACCAGCAGTTAGAAGAAGA...AGGACAGGGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTTTCTTCACTCCAGCTaGCTTAGGAATCCTGACATG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPFLHSS*LRNPDM
Trigger: CATGTCAGGATTCCTAAGCCAGCTGGAGTGAAGAAA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCATCCTTTCCTCTTCTaGGACTCTGAAGGAATAACG +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPHPFLF*DSEGIT
Trigger: CGTTATTCCTTCAGAGTCCCAGAAGAGGAAAGGATG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGACTCATGGAGCGGCCTaGCTCAGGGCGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGTHGAA*LRAGFG
Trigger: ACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGTCAAAGTCCCTCGCTaGGGCATCACTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQVKVPR*GITSLV
Trigger: GACCAAGGAAGTGATGCCCCAGCGAGGGACTTTGAC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAACTGCTGCCAGCCCCTaGTGGCTTTCAGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGTAASP*WLSGRA
Trigger: TGCTCGGCCTGAAAGCCACCAGGGGCTGGCAGCAGT...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp GTGAGCCACTCCAGGGACCAATTCTCCCTTCTGGATGCGGAGAAGCCCATGAGCACATCCATTTTCCACTaGCTATGGGGAATAATATTT +
Preference number: 4 (lower is better)
Translates to: VSHSRDQFSLLDAEKPMSTSIFH*LWGIIF
Trigger: AAATATTATTCCCCATAGCCAGTGGAAAATGGATGT...GCTCATGGGCTTCTCCGCATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTTATAGGTGCTTACAATaGAATCCCCAGCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPYRCLQ*NPQQDP
Trigger: AGGATCCTGCTGGGGATTCCATTGTAAGCACCTATA...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAAAGCAGGGGGCCGGCTaGCTGACTCCCTTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: STNMISQNLRVDNLAGHRKQGAG*LTPFSH
Trigger: GTGAGAGAAGGGAGTCAGCCAGCCGGCCCCCTGCTT...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAATCAAAGAGTGCCATaGTGCAATCCATGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPNQRVP*CNPWGE
Trigger: TTCACCCCATGGATTGCACCATGGCACTCTTTGATT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGGAAAACCAAATAGATaGGCTCCTTTTAGTTGTATC +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESGKPNR*APFSCI
Trigger: GATACAACTAAAAGGAGCCCATCTATTTGGTTTTCC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCCCCTCTGTCTAGATTaGATGGGGAGCCTTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGPLCLD*MGSLRL
Trigger: AAGCCTAAGGCTCCCCATCCAATCTAGACAGAGGGG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGGCGTGCTGCCAGTGCTaGGGGGCAGGGCTTACACTC +
Preference number: 4 (lower is better)
Translates to: LITYICVICLFKLPLGVGACCQC*GAGLTL
Trigger: GAGTGTAAGCCCTGCCCCCCAGCACTGGCAGCACGC...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTACTTGGGCTGGAAACTaGAACCTCTCTTTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSTWAGN*NLSLWF
Trigger: GAACCACAAAGAGAGGTTTCAGTTTCCAGCCCAAGT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTTAAGGTTGGTGTGTaGACTGAAAGTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLKVGV*TESGVE
Trigger: CTCCACTCCACTTTCAGTTCACACACCAACCTTAAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAAAGCAATTCTTTCATaGTCTATGATTGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPKAILS*SMIAAA
Trigger: GGCAGCCGCAATCATAGATCATGAAAGAATTGCTTT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CATTTGTGCCTATTAGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAAAGCAATTCTTTCATaGTCTATGATTGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLCLLGITQQGLRHCSHLKAILS*SMIAAA
Trigger: GGCAGCCGCAATCATAGATCATGAAAGAATTGCTTT...CAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCTAATAGGCACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACACCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTCCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTAGGGTCGAACCTTTTTaGGAGGAAGAGTCTGAATCC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSRVEPF*EEESES
Trigger: GGATTCAGACTCTTCCTCTCAAAAAGGTTCGACCCT...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp ATCATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTACTGTCCGACTTTCCTaGGGCCGAGGGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: IITICNHICLSPRWPVHSTVRLS*GRGFMG
Trigger: GCCCATGAACCCTCGGCCTCAGGAAAGTCGGACAGT...AGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGTTCCCCAGGCTTATGTaGAGAAGCCCACGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGFPRLM*RSPRPL
Trigger: GAGTGGGCGTGGGCTTCTTCACATAAGCCTGGGGAA...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTTGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFWWPPQ*HAGHLS
Trigger: ACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCA...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAATCTCACGTGAGGTGCTaGGGACAAGGATCTACCAAG +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQSHVRC*GQGSTK
Trigger: CTTGGTAGATCCTTGTCCTCAGCACCTCACGTGAGA...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAGAAGGAGAGAGAGGCTaGGAGCTAGCCAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQEGERG*ELARND
Trigger: ATCATTCCTGGCTAGCTCTCAGCCTCTCTCTCCTTC...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTAGACTGCAGTGGTTGTaGTCCCGGCCAAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFRLQWL*SRPKAA
Trigger: TGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCT...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGCGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGRQSLL*APLCLD
Trigger: ATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCG...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp ATCATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAAGTCCCTGCTGGTCTaGCCCTTACCTGCTACCCCG +
Preference number: 4 (lower is better)
Translates to: IITICNHICLSPRWPVHSKSLLV*PLPATP
Trigger: CGGGGTAGCAGGTAAGGGTCAGACCAGCAGGGACTT...AGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTATATATCTTTCCGACTTaGATGGATAACATCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVYIFPT*MDNIRS
Trigger: GCTTCTGATGTTATCCATGCAAGTCGGAAAGATATA...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp CATTTGTGCCTATTAGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGATCTATGATTGCGGCTaGCTGGGTTGTTTTAATGAG +
Preference number: 4 (lower is better)
Translates to: HLCLLGITQQGLRHCSHLIYDCG*LGCFNE
Trigger: CTCATTAAAACAACCCAGGCAGCCGCAATCATAGAT...CAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCTAATAGGCACAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCAGCTCCCGCGGTCAGTaGTCTCCAGGGAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KPMSYFRTIMRLYCESKISSRGQ*SPGRGS
Trigger: AGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCT...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGACCTGAATCCCTGTCCTaGTACTGCTGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: STNMISQNLRVDNLAGHRPESLS*YCCQPL
Trigger: CAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGG...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAGGCTACGGCAAAGTCTaGTCTGAGCGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGGYGKV*SERPSV
Trigger: GACAGAGGGGCGCTCAGAGCAGACTTTGCCGTAGCC...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp TTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTATTTTCAGGGTCTGAGACACTaGAGCCACTTGAGAATGCAA +
Preference number: 4 (lower is better)
Translates to: FVCLPDGLYTLEGLWDYFQGLRH*SHLRMQ
Trigger: TTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTG...AAAATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTGAATGCTGTGAGTCTTaGTGCTCTATACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPECCES*CSIPFS
Trigger: TGAAAAGGGTATAGAGCACCAAGACTCACAGCATTC...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTGTTCAGGAGGAACTaGACAAGTGGTTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLFRRN*TSGWSF
Trigger: AAAGCTCCAACCACTTGTCCAGTTCCTCCTGAACAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTAGATCTTCGGCCCTaGCAGTCAGTGTATATCCCA +
Preference number: 4 (lower is better)
Translates to: NHICLSPRWPVHSRRTLGLDLRP*QSVYIP
Trigger: TGGGATATACACTGACTGCCAGGGCCGAAGATCTAG...TCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GTCGCCCAGTTAGCCTGGCAACCTAGACAAGCCTCAGTAGCTCTCTCTCTCTGCTCTGAATCCATTCCATaGAGTTCACATCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: VAQLAWQPRQASVALSLCSESIP*SSHQRY
Trigger: ATATCTTTGATGTGAACTCCATGGAATGGATTCAGA...GCAGAGAGAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTTTAGGTTGGAACTGTTaGAAGCTGTGGAATGCCTCG +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLGWNC*KLWNAS
Trigger: CGAGGCATTCCACAGCTTCCAACAGTTCCAACCTAA...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGTTAGGCTGGGGGCGTGGATCTGAGAGTCGTGTCGTCAGAACTCCTGAATCCGCAACTCTAAGTGCATaGAATGAAATCAACGTTAAT +
Preference number: 4 (lower is better)
Translates to: LLGWGRGSESRVVRTPESATLSA*NEINVN
Trigger: ATTAACGTTGATTTCATTCCATGCACTTAGAGTTGC...GGATTCAGGAGTTCTGACGACACGACTCTCAGATCCACGCCCCCAGCCTAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGAAGCATCTCCAGCCCTaGGACAGACACCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGKHLQP*DRHLAV
Trigger: CACAGCGAGGTGTCTGTCCCAGGGCTGGAGATGCTT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTTGGGCTCACTCACTCTaGCCTGCGCACTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFWAHSL*PAHWGC
Trigger: ACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCCCA...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAATCAGTGACACAGACGTaGAGTCACAGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQSVTQT*SHRQQQ
Trigger: CTGCTGCTGTCTGTGACTCCACGTCTGTGTCACTGA...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGAATCTCGGCTTGGGATaGCCTCCTCCCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGNLGLG*PPPCLR
Trigger: TCTCAGGCAGGGAGGAGGCCATCCCAAGCCGAGATT...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGAKGGK*PCCVCG
Trigger: ACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGC...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCTGTGCTCACCAGACATaGGCTACGGCAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESCAHQT*ATAKSA
Trigger: AGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACA...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACCTTCTTCACACCCCTaGGCTAAGGGCATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQPSSHP*AKGIFP
Trigger: TGGAAAGATGCCCTTAGCCCAGGGGTGTGAAGAAGG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366769.7
CDS-3UTR CCA 90 bp ATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTATAGTCCATTCTCCACTTaGCAGCCCGCAGGATTGTTT +
Preference number: 4 (lower is better)
Translates to: IFVCLPDGLYTLEGLWDYSPFST*QPAGLF
Trigger: AAACAATCCTGCGGGCTGCCAAGTGGAGAATGGACT...ATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCGTAATGTCTCCACACTaGAGCACTGCCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESVMSPH*STAHWS
Trigger: AGACCAATGGGCAGTGCTTCAGTGTGGAGACATTAC...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAAGTTGCTGACCTTCTaGATCATGCAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPKLLTF*IMQFFL
Trigger: AAGAAAGAACTGCATGATTCAGAAGGTCAGCAACTT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAATTAGAAGCTAAGGCCTaGAGATACCCTCGTGCATCC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQLEAKA*RYPRAS
Trigger: GGATGCACGAGGGTATCTTCAGGCCTTAGCTTCTAA...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTATGACAACACTGGGCTaGGATGCTTTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGMTTLG*DAFPSA
Trigger: TGCTGAAGGAAAAGCATCTCAGCCCAGTGTTGTCAT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTCATGTCAATCACTTaGCTAATGACAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLMSIT*LMTTLG
Trigger: GCCCAGTGTTGTCATTAGTCAAGTGATTGACATGAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTATCAGAAGCCAAGACTaGACTCACAGAAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPIRSQD*THRKFF
Trigger: GAAGAATTTTCTGTGAGTTCAGTCTTGGCTTCTGAT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp ATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTTTGTTATTAGATGCTaGGAGCTGGGAAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IIFVCLPDGLYTLEGLWDFVIRC*ELGSCD
Trigger: GTCACAGCTTCCCAGCTCTCAGCATCTAATAACAAA...GTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp TTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTATTTTTTCTTTCATGATCTATaGTTGCGGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FVCLPDGLYTLEGLWDYFFFHDL*LRLPGL
Trigger: CAACCCAGGCAGCCGCAATCATAGATCATGAAAGAA...AAAATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTTTCTTTCATGATCTATaGTTGCGGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGFFHDL*LRLPGL
Trigger: CAACCCAGGCAGCCGCAATCATAGATCATGAAAGAA...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGAATGACGATTTCGTCCTaGGATCACAGCAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: NHICLSPRWPVHSRRTLGMTISS*DHSNKL
Trigger: CAGCTTGTTGCTGTGATCTCAGGACGAAATCGTCAT...TCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTTCGCCCATCCAATGCTaGCATAGGAAAAAGTCGTAC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGSPIQC*HRKKSY
Trigger: GTACGACTTTTTCCTATGTCAGCATTGGATGGGCGA...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp ATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGACTATTCGCCCATCCAATGCTaGCATAGGAAAAAGTCGTAC +
Preference number: 4 (lower is better)
Translates to: IFVCLPDGLYTLEGLWDYSPIQC*HRKKSY
Trigger: GTACGACTTTTTCCTATGTCAGCATTGGATGGGCGA...ATAGTCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGATTCCCCAGGCTTATGTaGAGAAGCCCACGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGFPRLM*RSPRPL
Trigger: GAGTGGGCGTGGGCTTCTTCACATAAGCCTGGGGAA...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTCGCAGGTCACCTCAGTaGCACAGACGTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFRRSPQ*HRRGVT
Trigger: TGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCG...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCTGGTGGCCACCTCAGTaGCACGCAGGTCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: KPMSYFRTIMRLYCESKIWWPPQ*HAGHLS
Trigger: ACTGAGGTGACCTGCGTGTCACTGAGGTGGCCACCA...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGACGGCAAAGTCTGCTCTaGGCGCCCCTCTGTCTAGAT +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGRQSLL*APLCLD
Trigger: ATCTAGACAGAGGGGCGCTCAGAGCAGACTTTGCCG...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAGGAGATGTGGACCGTaGCTGGATGTGAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESRRCGP*LDVKLD
Trigger: GTCAAGTTTCACATCCAGTCACGGTCCACATCTCCT...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442054.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTGCTGATGTTCTATGCTaGATACTCCTGGTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSADVLC*ILLVSN
Trigger: GTTACTCACCAGGAGTATGCAGCATAGAACATCAGC...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR GCA 90 bp AATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGAACTGGAGATCTCAACTaGGCAGATAGCATCCATTGG +
Preference number: 4 (lower is better)
Translates to: NHICLSPRWPVHSRRTLGTGDLN*ADSIHW
Trigger: CCAATGGATGCTATCTGCGCAGTTGAGATCTCCAGT...TCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAAATTTCCCTCCTCTGCTaGATCCTTTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQISLLC*ILSSSG
Trigger: CCCAGAAGAGGAAAGGATGCAGCAGAGGAGGGAAAT...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCCTGTCCTGCTACTGCTaGCAGCCCCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KPMSYFRTIMRLYCESKILSCYC*QPLVAF
Trigger: GAAAGCCACCAGGGGCTGGCAGCAGTAGCAGGACAG...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR GCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCAAAGAGTGCCATGGTaGAATCCATGGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSQRVPW*NPWGEY
Trigger: ATATTCACCCCATGGATTGCACCATGGCACTCTTTG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAACCTGCTTTTAGAATCTaGACGCATTCGGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQPAFRI*THSGLL
Trigger: GAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGG...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETGGKWP*CVCGFD
Trigger: GTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCC...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFGGKWP*CVCGFD
Trigger: GTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCC...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp AAAGCAACTCTAAGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAGGCGGCAAATGGCCCTaGTGCGTCTGTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: KATLSAWNEINVNLSCYGGGKWP*CVCGFD
Trigger: GTCAAAACCACAGACGCAGCAGGGCCATTTGCCGCC...TCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGAGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTATTCATTCCCTGTTGTaGTCACCAGACATGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGIHSLL*SPDMGY
Trigger: GTAGCCCATGTCTGGTGAGCACAACAGGGAATGAAT...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR GCA 90 bp ATCATCACAATTTGTAATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTTCCTTCTGCCCCTGCTaGATCCCAAGCCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: IITICNHICLSPRWPVHSSFCPC*IPSPHW
Trigger: CCAATGAGGGCTTGGGATGCAGCAGGGGCAGAAGGA...AGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATTACAAATTGTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCTCGTGTACCCAAGCTaGAATTTCTTAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSLVYPS*NFLMPP
Trigger: TGGAGGCATTAAGAAATTCCAGCTTGGGTACACGAG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTAACTGGACAAGTGGTTaGAGCTTTGTTTACACAAGT +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPNWTSG*SFVYTS
Trigger: ACTTGTGTAAACAAAGCTCCAACCACTTGTCCAGTT...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAAGTGAAGGACATTCTTTCCGACTTGCATaGATAACATCAGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LRHCSHLRMQWAHVSEGHSFRLA*ITSEAK
Trigger: CTTGGCTTCTGATGTTATCCATGCAAGTCGGAAAGA...ATGTCCTTCACTTACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp AGGCATTACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCAACAAGCTGATCATTTaGAATGAGTTCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: RHYPAGSETLQPLENAMGNKLII*NEFNLM
Trigger: CATCAGATTGAACTCATTCCAAATGATCAGCTTGTT...GCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGTAATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp CTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTAAGTGAAGGACATGCAGATATTCTTTACTaGAGATCTCAACTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: LRHCSHLRMQWAHVSEGHADILY*RSQLRR
Trigger: TCTGCGCAGTTGAGATCTCCAGTAAAGAATATCTGC...ATGTCCTTCACTTACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp GCGGAGAAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCCTAGATCTTCGGCCCTaGCAGTCAGTGTATATCCCA +
Preference number: 4 (lower is better)
Translates to: AEKPMSYFRTIMRLYCESLDLRP*QSVYIP
Trigger: TGGGATATACACTGACTGCCAGGGCCGAAGATCTAG...GCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp ACCCAGCAGGGTCTGAGACACTGCAGCCACTTGAGAATGCAATGGGCACACGTATCTGAATCCATTCCATaGAGTTCACATCAAAGATAT +
Preference number: 4 (lower is better)
Translates to: TQQGLRHCSHLRMQWAHVSESIP*SSHQRY
Trigger: ATATCTTTGATGTGAACTCCATGGAATGGATTCAGA...TACGTGTGCCCATTGCATTCTCAAGTGGCTGCAGTGTCTCAGACCCTGCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR CCA 90 bp AGCACAAACATGATTAGTCAGAATTTGAGGGTAGATAACTTGGCTGGACATAGAGGGGCATCACTTCCTTaGTCCATGCCTCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: STNMISQNLRVDNLAGHRGASLP*SMPPED
Trigger: GTCCTCTGGAGGCATGGACCAAGGAAGTGATGCCCC...TCTATGTCCAGCCAAGTTATCTACCCTCAAATTCTGACTAATCATGTTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAGGAAAGAGATTTTAAAATGGGCTCCATGAAATGCAGCTCATCTAGTTCAGGGGTCAAAGTCCCTCGCTaGGGCATCACTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KERDFKMGSMKCSSSSSGVKVPR*GITSLV
Trigger: GACCAAGGAAGTGATGCCCCAGCGAGGGACTTTGAC...CCCTGAACTAGATGAGCTGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AGTGCATGGAATGAAATCAACGTTAATCTAAGCTGCTACGGAAAGTCTGTCTTTGCCGAGCAGGCGAGGTaGAGGGAAGAGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SAWNEINVNLSCYGKSVFAEQAR*REEMKV
Trigger: CACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGC...AAAGACAGACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000442054.5
ENST00000448940.5
CDS-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACAAAGCATCTCCAGCCCTaGGACAGACACCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETKHLQP*DRHLAV
Trigger: CACAGCGAGGTGTCTGTCCCAGGGCTGGAGATGCTT...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp GCTTCAAATGTTAAAGCTCTGGTGCCCAGGGCATGCCCCAAACCAGCAAAACCTCATCTCATTTCCTTATaGCAACTACAACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ASNVKALVPRACPKPAKPHLISL*QLQQEE
Trigger: TTCCTCCTGTTGTAGTTGCCATAAGGAAATGAGATG...AGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTAACATTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAATGTGAGCTTGAGGCCTTTCCACCCTTTACATTACATTACAGACAAGAAACACTGTTAATCTCGGCTTaGGATGGCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KCELEAFPPFTLHYRQETLLISA*DGLLPA
Trigger: GGCAGGGAGGAGGCCATCCCAAGCCGAGATTAACAG...TGTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTCCATGGTGCAATCCATaGGGTGAATATGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGPWCNP*GEYGQV
Trigger: GACTTGTCCATATTCACCCCATGGATTGCACCATGG...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CTTATCACTTACATTTGTGTAATCTGTCTATTTAAGCTACCTTTGGGAGTAGGGGCCAAAGGCGGCAAATaGCCCTGCTGCGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LITYICVICLFKLPLGVGAKGGK*PCCVCG
Trigger: ACCACAGACGCAGCAGGGCCATTTGCCGCCTTTGGC...CCCTACTCCCAAAGGTAGCTTAAATAGACAGATTACACAAATGTAAGTGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp AAGCCCATGAGCTATTTTAGGACTATAATGAGACTCTACTGTGAAAGCAAAATCCATCTAGTTCAGGGCTaGGCCAGAGAGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KPMSYFRTIMRLYCESKIHLVQG*ARETGE
Trigger: CTCCCCCGTCTCTCTGGCCCAGCCCTGAACTAGATG...GATTTTGCTTTCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR CCA 90 bp CCTTCAGAAGCTACAACACTCCTTGTAACCTTTCAGATGGAAGGGATCAGAGGTTGGATAAGGGAAACCTaGCATGGGCAGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSEATTLLVTFQMEGIRGWIRET*HGQIFQ
Trigger: CTGAAAGATCTGCCCATGCCAGGTTTCCCTTATCCA...ACCTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448940.5
CDS-3UTR CCA 90 bp CATTACTCAAACATGACTCCACCTCTAGGGAGTGATTTTCCTAATTATTCTGCCACCTTTGGACATGCGTaGAATGTCCTGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HYSNMTPPLGSDFPNYSATFGHA*NVLPQP
Trigger: GGGCTGAGGCAGGACATTCCACGCATGTCCAAAGGT...GGCAGAATAATTAGGAAAATCACTCCCTAGAGGTGGAGTCATGTTTGAGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp CAGTGGAAAAATCAAAGAGTGCCATGGTGCAATCCATGGGGTGAATATGGACAATGGACCATCAACAGTTaGATACTGCAGAGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QWKNQRVPWCNPWGEYGQWTINS*ILQSLD
Trigger: GTCCAAGCTCTGCAGTATTCAACTGTTGATGGTCCA...TTGTCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
CDS-3UTR TCA 90 bp TGTTTCTCTCCTAAAGCCCTGCTTTTAGAATCTGCACGCATTCGGGACTGCTCTCATCCTTTTCATCGCTaGCCCACTGAATTATTTCTG +
Preference number: 4 (lower is better)
Translates to: CFSPKALLLESARIRDCSHPFHR*PTELFL
Trigger: CAGAAATAATTCAGTGGGTCAGCGATGAAAAGGATG...AGAGCAGTCCCGAATGCGTGCAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334218.9
ENST00000366767.7
ENST00000366769.7
ENST00000448940.5
CDS-3UTR TCA 90 bp TTCATCCCTAACAGCTACCCCTTGTTATTCTCTATTAATGTATGCTGTTTACTTCCACACACAGGCATGTaGGAGCTCCATGGCGCACCT +
Preference number: 4 (lower is better)
Translates to: FIPNSYPLLFSINVCCLLPHTGM*ELHGAP
Trigger: AGGTGCGCCATGGAGCTCTCACATGCCTGTGTGTGG...AAGTAAACAGCATACATTAATAGAGAATAACAAGGGGTAGCTGTTAGGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429440.5
CDS-3UTR TCA 90 bp AATCATATTTGTCTGTCTCCCAGATGGCCTGTACACTCTAGAAGGACTCTGGGATTGAGAGGAAGAGTCTaGATCCATTCCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NHICLSPRWPVHSRRTLGLRGRV*IHSMEF
Trigger: GAACTCCATGGAATGGATTCAGACTCTTCCTCTCAA...TCCCAGAGTCCTTCTAGAGTGTACAGGCCATCTGGGAGACAGACAAATATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts: